EP2875132A4 - Cooperative primers, probes, and applications thereof - Google Patents

Cooperative primers, probes, and applications thereof

Info

Publication number
EP2875132A4
EP2875132A4 EP13820614.9A EP13820614A EP2875132A4 EP 2875132 A4 EP2875132 A4 EP 2875132A4 EP 13820614 A EP13820614 A EP 13820614A EP 2875132 A4 EP2875132 A4 EP 2875132A4
Authority
EP
European Patent Office
Prior art keywords
probes
applications
cooperative primers
cooperative
primers
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Withdrawn
Application number
EP13820614.9A
Other languages
German (de)
French (fr)
Other versions
EP2875132A2 (en
Inventor
Brent C Satterfield
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
DNA Logix Inc
Original Assignee
DNA Logix Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by DNA Logix Inc filed Critical DNA Logix Inc
Publication of EP2875132A2 publication Critical patent/EP2875132A2/en
Publication of EP2875132A4 publication Critical patent/EP2875132A4/en
Withdrawn legal-status Critical Current

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844—Nucleic acid amplification reactions
    • C12Q1/6853—Nucleic acid amplification reactions using modified primers or templates
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844—Nucleic acid amplification reactions

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Analytical Chemistry (AREA)
  • Microbiology (AREA)
  • Immunology (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Physics & Mathematics (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
EP13820614.9A 2012-07-17 2013-07-17 Cooperative primers, probes, and applications thereof Withdrawn EP2875132A4 (en)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US201261672329P 2012-07-17 2012-07-17
US201261732532P 2012-12-03 2012-12-03
PCT/US2013/050811 WO2014014988A2 (en) 2012-07-17 2013-07-17 Cooperative primers, probes, and applications thereof

Publications (2)

Publication Number Publication Date
EP2875132A2 EP2875132A2 (en) 2015-05-27
EP2875132A4 true EP2875132A4 (en) 2016-02-24

Family

ID=49949362

Family Applications (1)

Application Number Title Priority Date Filing Date
EP13820614.9A Withdrawn EP2875132A4 (en) 2012-07-17 2013-07-17 Cooperative primers, probes, and applications thereof

Country Status (11)

Country Link
EP (1) EP2875132A4 (en)
JP (1) JP2015522292A (en)
KR (1) KR102270892B1 (en)
CN (1) CN104603268A (en)
AU (1) AU2013292706B2 (en)
BR (1) BR112015000911A2 (en)
CA (1) CA2879421A1 (en)
IN (1) IN2015KN00014A (en)
MX (1) MX363880B (en)
RU (1) RU2015103777A (en)
WO (1) WO2014014988A2 (en)

Families Citing this family (9)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP3022323B1 (en) 2013-07-18 2019-04-24 President and Fellows of Harvard College Specific nucleic acid amplification with compounded selectivity
CN107109474B (en) 2014-08-19 2021-03-19 豪夫迈·罗氏有限公司 Methods and compositions for nucleic acid detection
CN104845967B (en) * 2015-04-15 2020-12-11 苏州新海生物科技股份有限公司 Oligonucleotide fragment, method for selectively amplifying target nucleic acid sequence variant by using same and application of oligonucleotide fragment
CN106916877A (en) * 2015-12-24 2017-07-04 广州好芝生物科技有限公司 A kind of mycobacterium tuberculosis rifampin-resistance mutation detection kit
WO2017168332A1 (en) * 2016-03-28 2017-10-05 Boreal Genomics, Inc. Linked duplex target capture
US11268137B2 (en) 2016-12-09 2022-03-08 Boreal Genomics, Inc. Linked ligation
KR102345601B1 (en) 2017-09-29 2021-12-30 주식회사 씨젠 Detection of target nucleic acid sequences by PTO cleavage and extension-dependent extension analysis
US20210262021A1 (en) * 2018-06-08 2021-08-26 Advanced Theranostics Inc. Cleavable co-operative primers and method of amplifying nucleic acid sequences using same
CN112575072B (en) * 2020-12-29 2021-12-31 苏州科贝生物技术有限公司 Primer pair and kit for detecting BRAF gene V600E mutation in plasma free DNA

Citations (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2006095941A1 (en) * 2005-03-05 2006-09-14 Seegene, Inc. Processes using dual specificity oligonucleotide and dual specificity oligonucleotide
WO2011027966A2 (en) * 2009-09-03 2011-03-10 Seegene, Inc. Td probe and its uses

Family Cites Families (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6451588B1 (en) * 2000-06-30 2002-09-17 Pe Corporation (Ny) Multipartite high-affinity nucleic acid probes
EP1880021A2 (en) * 2005-05-02 2008-01-23 Stratagene California Oligonucleotide probe/primer compositions and methods for polynucleotide detection
CA2648702A1 (en) * 2006-04-04 2007-10-11 Arcxis Biotechnologies, Inc. Cooperative probes and methods of using them
MX2012000969A (en) * 2009-07-22 2012-02-28 Du Pont Sequences and their use for detection and characterization of e. coli o157:h7.

Patent Citations (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2006095941A1 (en) * 2005-03-05 2006-09-14 Seegene, Inc. Processes using dual specificity oligonucleotide and dual specificity oligonucleotide
WO2011027966A2 (en) * 2009-09-03 2011-03-10 Seegene, Inc. Td probe and its uses

Non-Patent Citations (2)

* Cited by examiner, † Cited by third party
Title
HARDENBOL PAUL ET AL: "Multiplexed genotyping with sequence-tagged molecular inversion probes", NATURE BIOTECHNOLOGY, NATURE PUBLISHING GROUP, US, vol. 21, no. 6, 1 June 2003 (2003-06-01), pages 673 - 678, XP002292164, ISSN: 1087-0156, DOI: 10.1038/NBT821 *
MICHAEL S. AKHRAS ET AL: "Connector Inversion Probe Technology: A Powerful One-Primer Multiplex DNA Amplification System for Numerous Scientific Applications", PLOS ONE, vol. 2, no. 9, 1 January 2007 (2007-01-01), pages e915 - e915, XP055041968, ISSN: 1932-6203, DOI: 10.1371/journal.pone.0000915 *

Also Published As

Publication number Publication date
IN2015KN00014A (en) 2015-07-31
AU2013292706B2 (en) 2018-12-20
RU2015103777A (en) 2016-09-10
BR112015000911A2 (en) 2017-06-27
JP2015522292A (en) 2015-08-06
CA2879421A1 (en) 2014-01-23
KR20150036537A (en) 2015-04-07
EP2875132A2 (en) 2015-05-27
WO2014014988A2 (en) 2014-01-23
KR102270892B1 (en) 2021-06-30
MX363880B (en) 2019-04-05
MX2015000766A (en) 2015-08-06
WO2014014988A3 (en) 2014-02-27
CN104603268A (en) 2015-05-06
AU2013292706A1 (en) 2015-01-29

Similar Documents

Publication Publication Date Title
IL235826A0 (en) New diazaspirocycloalkane and azaspirocycloalkane
IL237309A0 (en) Benzocyclooctyne compounds and uses thereof
GB2502554B (en) Primers
IL237068A (en) 1,3-dioxanomorphides and 1,3-dioxanocodides
IL237926A0 (en) Combinations and uses thereof
EP2806874A4 (en) Certain chemical entities, compositions, and methods
EP2916838A4 (en) Certain chemical entities, compositions, and methods
EP2875132A4 (en) Cooperative primers, probes, and applications thereof
IL233824A (en) 1h-indazole-3-carboxamide compounds, compositions comprising them and uses thereof
ZA201405392B (en) Substituted phenylimidazopyrazoles and use thereof
IL237542B (en) Bolaamphiphilic compounds, compositions and uses thereof
GB201223330D0 (en) Products, methods and uses
GB201211158D0 (en) Biomarkers and uses thereof
IL237540A0 (en) Bolaamphiphilic compounds, compositions and uses thereof
SG11201504482VA (en) Beta-hexosyl-transferases and uses thereof
GB201511298D0 (en) Golf-driving ranges
PL2882708T3 (en) New compounds and uses thereof
IL267888B (en) Bolaamphiphilic compounds, compositions and uses thereof
IL237538B (en) Bolaamphiphilic compounds, compositions and uses thereof
IL237539A0 (en) Bolaamphiphilic compounds, compositions and uses thereof
PL2867172T3 (en) Metal-scavenging polymers and uses thereof
GB201210013D0 (en) Selecive oligonucleotide probes and primers
GB201222342D0 (en) Compounds and uses thereof
GB201213077D0 (en) Primer sets
GB201222541D0 (en) Kiddibidet and pottibidet

Legal Events

Date Code Title Description
PUAI Public reference made under article 153(3) epc to a published international application that has entered the european phase

Free format text: ORIGINAL CODE: 0009012

17P Request for examination filed

Effective date: 20150216

AK Designated contracting states

Kind code of ref document: A2

Designated state(s): AL AT BE BG CH CY CZ DE DK EE ES FI FR GB GR HR HU IE IS IT LI LT LU LV MC MK MT NL NO PL PT RO RS SE SI SK SM TR

AX Request for extension of the european patent

Extension state: BA ME

DAX Request for extension of the european patent (deleted)
A4 Supplementary search report drawn up and despatched

Effective date: 20160126

RIC1 Information provided on ipc code assigned before grant

Ipc: C12Q 1/68 20060101ALI20160120BHEP

Ipc: C12N 15/11 20060101AFI20160120BHEP

STAA Information on the status of an ep patent application or granted ep patent

Free format text: STATUS: THE APPLICATION IS DEEMED TO BE WITHDRAWN

18D Application deemed to be withdrawn

Effective date: 20160823