WO1996005315A3 - Nucleotide and amino acid sequences of the envelope 1 and core genes of hepatitis c virus - Google Patents

Nucleotide and amino acid sequences of the envelope 1 and core genes of hepatitis c virus Download PDF

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Publication number
WO1996005315A3
WO1996005315A3 PCT/US1995/010398 US9510398W WO9605315A3 WO 1996005315 A3 WO1996005315 A3 WO 1996005315A3 US 9510398 W US9510398 W US 9510398W WO 9605315 A3 WO9605315 A3 WO 9605315A3
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WIPO (PCT)
Prior art keywords
envelope
hepatitis
nucleotide
virus
amino acid
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Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Ceased
Application number
PCT/US1995/010398
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French (fr)
Other versions
WO1996005315A2 (en
WO1996005315A9 (en
Inventor
Jens Bukh
Roger H Miller
Robert H Purcell
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US Department of Health and Human Services
Government of the United States of America
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US Department of Health and Human Services
Government of the United States of America
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Application filed by US Department of Health and Human Services, Government of the United States of America filed Critical US Department of Health and Human Services
Priority to EP95930831A priority Critical patent/EP0779924B1/en
Priority to AT95930831T priority patent/ATE309367T1/en
Priority to AU34065/95A priority patent/AU712385B2/en
Priority to DE69534600T priority patent/DE69534600D1/en
Publication of WO1996005315A2 publication Critical patent/WO1996005315A2/en
Publication of WO1996005315A3 publication Critical patent/WO1996005315A3/en
Publication of WO1996005315A9 publication Critical patent/WO1996005315A9/en
Anticipated expiration legal-status Critical
Ceased legal-status Critical Current

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Classifications

    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07K—PEPTIDES
    • C07K14/00—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/005—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from viruses
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/70—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving virus or bacteriophage
    • C12Q1/701—Specific hybridization probes
    • C12Q1/706—Specific hybridization probes for hepatitis
    • C12Q1/707—Specific hybridization probes for hepatitis non-A, non-B Hepatitis, excluding hepatitis D
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K39/00—Medicinal preparations containing antigens or antibodies
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N2770/00—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA ssRNA viruses positive-sense
    • C12N2770/00011—Details
    • C12N2770/24011—Flaviviridae
    • C12N2770/24211—Hepacivirus, e.g. hepatitis C virus, hepatitis G virus
    • C12N2770/24222—New viral proteins or individual genes, new structural or functional aspects of known viral proteins or genes
    • Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y10—TECHNICAL SUBJECTS COVERED BY FORMER USPC
    • Y10S—TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y10S435/00—Chemistry: molecular biology and microbiology
    • Y10S435/81—Packaged device or kit

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  • Chemical & Material Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Genetics & Genomics (AREA)
  • Zoology (AREA)
  • Communicable Diseases (AREA)
  • Biophysics (AREA)
  • Virology (AREA)
  • Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Biochemistry (AREA)
  • Molecular Biology (AREA)
  • Immunology (AREA)
  • Wood Science & Technology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Medicinal Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • General Engineering & Computer Science (AREA)
  • Biotechnology (AREA)
  • Analytical Chemistry (AREA)
  • Gastroenterology & Hepatology (AREA)
  • Microbiology (AREA)
  • Peptides Or Proteins (AREA)
  • Medicines Containing Antibodies Or Antigens For Use As Internal Diagnostic Agents (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Agricultural Chemicals And Associated Chemicals (AREA)
  • Micro-Organisms Or Cultivation Processes Thereof (AREA)
  • Saccharide Compounds (AREA)

Abstract

The nucleotide and deduced amino acid sequences of cDNAs encoding the envelope (1) genes and core genes of isolates of hepatitis C virus (HCV) are disclosed. The invention relates to the oligonucleotides, peptides and recombinant envelope (1) and core proteins derived from these sequences and their use in diagnostic methods and vaccines.
PCT/US1995/010398 1994-08-15 1995-08-15 Nucleotide and amino acid sequences of the envelope 1 and core genes of hepatitis c virus Ceased WO1996005315A2 (en)

Priority Applications (4)

Application Number Priority Date Filing Date Title
EP95930831A EP0779924B1 (en) 1994-08-15 1995-08-15 Nucleotide and amino acid sequences of the envelope 1 and core genes of hepatitis c virus
AT95930831T ATE309367T1 (en) 1994-08-15 1995-08-15 NUCLEOTIDE AND AMINO ACID SEQUENCES OF THE ENVELOPE PROTEIN 1 AND CORE PROTEIN GENES OF HEPATITIS C VIRUS
AU34065/95A AU712385B2 (en) 1994-08-15 1995-08-15 Nucleotide and amino acid sequences of the envelope 1 and core genes of hepatitis C virus
DE69534600T DE69534600D1 (en) 1994-08-15 1995-08-15 NUCLEOTIDE AND AMINO ACID SEQUENCES OF THE GENES OF CROP PROTEIN 1 AND THE CORE PROTEIN OF HEPATITIS C VIRUS

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US08/290,665 US5882852A (en) 1993-06-29 1994-08-15 Hepatitic C virus (HCV) core gene nucleotide sequences and related methods of detecting major and minor genotypes of HCV isolates
US08/290,665 1994-08-15

Publications (3)

Publication Number Publication Date
WO1996005315A2 WO1996005315A2 (en) 1996-02-22
WO1996005315A3 true WO1996005315A3 (en) 1996-04-04
WO1996005315A9 WO1996005315A9 (en) 1996-05-30

Family

ID=23117043

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/US1995/010398 Ceased WO1996005315A2 (en) 1994-08-15 1995-08-15 Nucleotide and amino acid sequences of the envelope 1 and core genes of hepatitis c virus

Country Status (7)

Country Link
US (1) US5882852A (en)
EP (1) EP0779924B1 (en)
AT (1) ATE309367T1 (en)
AU (1) AU712385B2 (en)
CA (1) CA2197569A1 (en)
DE (1) DE69534600D1 (en)
WO (1) WO1996005315A2 (en)

Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US7052830B1 (en) 1998-06-09 2006-05-30 Branch Andrea D Hepatitis C virus peptides and uses thereof

Families Citing this family (21)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US7255997B1 (en) 1993-04-27 2007-08-14 N.V. Innogenetics S.A. Sequences of hepatitis C virus genotypes and their use as therapeutic and diagnostic agents
EP0651807B1 (en) * 1993-04-27 2007-09-12 N.V. Innogenetics S.A. New sequences of hepatitis c virus genotypes and their use as therapeutic and diagnostic agents
US6235888B1 (en) 1994-10-05 2001-05-22 The General Hospital Corporation Hepatitis C virus vaccine
KR970065713A (en) * 1996-03-19 1997-10-13 성재갑 Secretory envelope proteins 1 and 2 of hepatitis C virus (Japanese type)
CN1086421C (en) * 1997-10-14 2002-06-19 复旦大学 Synthesis and clone of composite polyvalent vaccine gene for type-C hepatitis virus
ES2281179T3 (en) * 1998-06-09 2007-09-16 Andrea D. Branch NEW PEPTIDES OF THE HEPATITIS C VIRUS AND USES OF THE SAME.
US6995299B2 (en) * 1999-11-02 2006-02-07 University Of Connecticut Propagation of human hepatocytes in non-human animals
EP1178116A1 (en) 2000-08-03 2002-02-06 Hybrigenics S.A. Sid nucleic acids and polypeptides selected from a pathogenic strain of hepatitis C virus and applications thereof
JP2002125688A (en) * 2000-10-30 2002-05-08 Tosoh Corp Oligonucleotides and detection method for sensitive detection of hepatitis C virus
US7196183B2 (en) * 2001-08-31 2007-03-27 Innogenetics N.V. Hepatitis C virus genotype, and its use as prophylactic, therapeutic and diagnostic agent
ES2596753T3 (en) * 2003-08-29 2017-01-11 Fujirebio Europe N.V. New clade of the hepatitis C virus and prototype sequences thereof
CA2544253A1 (en) * 2003-11-12 2005-05-26 Progenics Pharmaceuticals, Inc. Novel sequences encoding hepatitis c virus glycoproteins
WO2005067643A2 (en) 2004-01-07 2005-07-28 Third Wave Technologies, Inc. Determination of hepatitis c virus genotype
EP1846439A2 (en) 2005-01-31 2007-10-24 The Johns Hopkins University Use of consensus sequence as vaccine antigen to enhance recognition of virulent viral variants
US20070072211A1 (en) * 2005-06-30 2007-03-29 Roche Molecular Systems, Inc. Asymmetric PCR coupled with post-PCR characterization for the identification of nucleic acids
EP2463389A1 (en) 2006-10-20 2012-06-13 Innogenetics N.V. Methodology for analysis of sequence variations within the HCV NS5B genomic region
EP2121991A2 (en) 2006-10-20 2009-11-25 Innogenetics N.V. Methodology for analysis of sequence variations within the hcv ns3/4a genomic region
SG154346A1 (en) * 2008-01-10 2009-08-28 Turbine Overhaul Services Pte System and method for restoring metal components
EP2807274B1 (en) * 2012-01-27 2019-01-23 Vib Vzw Monocyte biomarkers for cancer detection
WO2016172121A1 (en) * 2015-04-20 2016-10-27 Qoolabs, Inc. Camelid single-domain hcv antibodies and methods of use
ES3008759T3 (en) * 2016-08-02 2025-03-25 Hoffmann La Roche Helper oligonucleotide for improving efficiency of amplification and detection/quantitation of nucleic acids

Citations (7)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO1992019743A2 (en) * 1991-05-08 1992-11-12 Chiron Corporation Hcv genomic sequences for diagnostics and therapeutics
WO1992021759A1 (en) * 1991-06-06 1992-12-10 Institut Pasteur Nucleotide and peptide sequences of an isolate of the hepatitis c virus, diagnostic and therapeutic applications thereof
WO1994001778A1 (en) * 1992-07-07 1994-01-20 Chiron Corporation Immunoassays for anti-hcv antibodies using antigens with conformational epitopes
EP0586065A2 (en) * 1992-07-16 1994-03-09 Tonen Corporation Antigenic peptides for grouping hepatitis C virus, kit comprising the same and methods for its grouping using the same
WO1994025601A2 (en) * 1993-04-27 1994-11-10 N.V. Innogenetics S.A. New sequences of hepatitis c virus genotypes and their use as therapeutic and diagnostic agents
WO1994027153A1 (en) * 1993-05-10 1994-11-24 Chiron Corporation Methods of typing hepatitis c virus and reagents for use therein
WO1995001442A2 (en) * 1993-06-29 1995-01-12 The Government Of The United States Of America, Represented By The Secretary, Department Of Health And Human Services Nucleotide and amino acid sequences of the envelope 1 gene of 51 hepatitis c virus isolates and the use of reagents derived therefrom as diagnostic reagents and vaccines

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US5372928A (en) * 1989-09-15 1994-12-13 Chiron Corporation Hepatitis C virus isolates
US5427909A (en) * 1991-09-09 1995-06-27 Immuno Japan Inc. Oligonucleotides and determination system of HCV genotypes

Patent Citations (7)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO1992019743A2 (en) * 1991-05-08 1992-11-12 Chiron Corporation Hcv genomic sequences for diagnostics and therapeutics
WO1992021759A1 (en) * 1991-06-06 1992-12-10 Institut Pasteur Nucleotide and peptide sequences of an isolate of the hepatitis c virus, diagnostic and therapeutic applications thereof
WO1994001778A1 (en) * 1992-07-07 1994-01-20 Chiron Corporation Immunoassays for anti-hcv antibodies using antigens with conformational epitopes
EP0586065A2 (en) * 1992-07-16 1994-03-09 Tonen Corporation Antigenic peptides for grouping hepatitis C virus, kit comprising the same and methods for its grouping using the same
WO1994025601A2 (en) * 1993-04-27 1994-11-10 N.V. Innogenetics S.A. New sequences of hepatitis c virus genotypes and their use as therapeutic and diagnostic agents
WO1994027153A1 (en) * 1993-05-10 1994-11-24 Chiron Corporation Methods of typing hepatitis c virus and reagents for use therein
WO1995001442A2 (en) * 1993-06-29 1995-01-12 The Government Of The United States Of America, Represented By The Secretary, Department Of Health And Human Services Nucleotide and amino acid sequences of the envelope 1 gene of 51 hepatitis c virus isolates and the use of reagents derived therefrom as diagnostic reagents and vaccines

Non-Patent Citations (13)

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Title
BUKH J ET AL: "AT LEAST 12 GENOTYPES OF HEPATITIS C VIRUS PREDICTED BY SEQUENCE ANALYSIS OF THE PUTATIVE E1 GENE OF ISOLATES COLLECTED WORLDWIDE.", PROC NATL ACAD SCI U S A 90 (17). 1993. 8234-8238. CODEN: PNASA6 ISSN: 0027-8424 *
CHA, T. A. ET AL: "At least five related, but distinct, hepatitis C viral genotypes exist", PROC. NATL. ACAD. SCI. U. S. A. (1992), 89(15), 7144-8 CODEN: PNASA6;ISSN: 0027-8424, 1 August 1992 (1992-08-01) *
J. BUKH ET AL.: "Genetic Heterogeneity of hepatitis C virus: Quasispecies and genotypes", SEMINARS IN LIVER DISEASE, vol. 15, no. 1, pages 41 - 63 *
J. BUKH ET AL: "Importance of primer selection for the detection of hepatitis C virus RNA with the polymerase chain reaction assay", PROC. NATL. ACAD. SCI. USA, vol. 89, pages 187 - 191 *
JENS BUKH ET AL.: "Sequence analysis of the 5' noncoding region of hepatitis C virus.", PROC. NATL. ACAD. SCI. USA., vol. 89, no. 11, pages 4942 - 4946 *
KAO J-H ET AL: "Detection of divergent hepatitis C virus envelope sequences.", JOURNAL OF BIOMEDICAL SCIENCE 1 (3). 1994. 158-162. ISSN: 1021-7770 *
L. STUYVER: "Cloning and phylogenetic analysis of the core, E2 and NS3/NS4 regions of the hepatitis C virus type 5a+", BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, vol. 202, no. 3, 15 August 1994 (1994-08-15), pages 1308 - 1314 *
LI, JI-SU ET AL: "Identification of the third major genotype of hepatitis C virus in France", BIOCHEM. BIOPHYS. RES. COMMUN. (1994), 199(3), 1474-81 CODEN: BBRCA9;ISSN: 0006-291X, 30 March 1994 (1994-03-30) *
RAVAGGI A ET AL: "Distribution of viral genotypes in Italy determined by hepatitis C virus typing by DNA immunoassay.", JOURNAL OF CLINICAL MICROBIOLOGY 32 (9). 1994. 2280-2284. ISSN: 0095-1137 *
ROGGENDORF M ET AL: "Variability of the envelope regions of HCV in European isolates and its significance for diagnostic tools.", ARCHIVES OF VIROLOGY SUPPLEMENTUM 0 (7). 1993. 27-39. ISSN: 0939-1983 *
SIMMONDS P ET AL: "Identification of genotypes of hepatitis C virus by sequence comparisons in the core, E1 and NS-5 regions.", JOURNAL OF GENERAL VIROLOGY 75 (5). 1994. 1053-1061. ISSN: 0022-1317 *
STUYVER L ET AL: "ANALYSIS OF THE PUTATIVE E1 ENVELOPE AND NS4A EPITOPE REGIONS OF HCV TYPE 3.", BIOCHEM BIOPHYS RES COMMUN 192 (2). 1993. 635-641. CODEN: BBRCA9 ISSN: 0006-291X, 30 April 1993 (1993-04-30) *
STUYVER, LIEVEN ET AL: "Classification of hepatitis C viruses based on phylogenetic analysis of the envelope 1 and nonstructural 5B regions and identification of five additional subtypes", PROC. NATL. ACAD. SCI. U. S. A. (1994), 91(21), 10134-8 CODEN: PNASA6;ISSN: 0027-8424, 11 October 1994 (1994-10-11) *

Cited By (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US7052830B1 (en) 1998-06-09 2006-05-30 Branch Andrea D Hepatitis C virus peptides and uses thereof
US7198891B2 (en) 1998-06-09 2007-04-03 Branch Andrea D Hepatitis C virus peptides and uses thereof

Also Published As

Publication number Publication date
EP0779924B1 (en) 2005-11-09
AU3406595A (en) 1996-03-07
AU712385B2 (en) 1999-11-04
ATE309367T1 (en) 2005-11-15
WO1996005315A2 (en) 1996-02-22
US5882852A (en) 1999-03-16
EP0779924A2 (en) 1997-06-25
DE69534600D1 (en) 2005-12-15
CA2197569A1 (en) 1996-02-22

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