WO2001007652A3 - Detection of human hepatitis b virus surface antigen mutants by specific amplification and its application on gene chip - Google Patents

Detection of human hepatitis b virus surface antigen mutants by specific amplification and its application on gene chip Download PDF

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Publication number
WO2001007652A3
WO2001007652A3 PCT/IB2000/001079 IB0001079W WO0107652A3 WO 2001007652 A3 WO2001007652 A3 WO 2001007652A3 IB 0001079 W IB0001079 W IB 0001079W WO 0107652 A3 WO0107652 A3 WO 0107652A3
Authority
WO
WIPO (PCT)
Prior art keywords
detection
surface antigen
virus surface
human hepatitis
gene chip
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Ceased
Application number
PCT/IB2000/001079
Other languages
French (fr)
Other versions
WO2001007652A2 (en
Inventor
Chong-Jin Oon
Wei-Ning Chen
Ai-Lin Leong
Shiuan Koh
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Government of The Republic of Singapore
Original Assignee
Government of The Republic of Singapore
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Government of The Republic of Singapore filed Critical Government of The Republic of Singapore
Priority to EP00949838A priority Critical patent/EP1250464B1/en
Priority to DE60033567T priority patent/DE60033567D1/en
Priority to AU63097/00A priority patent/AU6309700A/en
Priority to CA002391824A priority patent/CA2391824A1/en
Publication of WO2001007652A2 publication Critical patent/WO2001007652A2/en
Publication of WO2001007652A3 publication Critical patent/WO2001007652A3/en
Anticipated expiration legal-status Critical
Ceased legal-status Critical Current

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Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/70—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving virus or bacteriophage
    • C12Q1/701—Specific hybridization probes
    • C12Q1/706—Specific hybridization probes for hepatitis
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813—Hybridisation assays
    • C12Q1/6834—Enzymatic or biochemical coupling of nucleic acids to a solid phase
    • C12Q1/6837—Enzymatic or biochemical coupling of nucleic acids to a solid phase using probe arrays or probe chips

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  • Life Sciences & Earth Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Organic Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Zoology (AREA)
  • Immunology (AREA)
  • Wood Science & Technology (AREA)
  • Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Biotechnology (AREA)
  • Analytical Chemistry (AREA)
  • Molecular Biology (AREA)
  • Physics & Mathematics (AREA)
  • Virology (AREA)
  • Communicable Diseases (AREA)
  • Biochemistry (AREA)
  • Biophysics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Peptides Or Proteins (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Micro-Organisms Or Cultivation Processes Thereof (AREA)
  • Preparation Of Compounds By Using Micro-Organisms (AREA)

Abstract

Novel DNA probe sequences for detection, by polymerase chain reaction, of human hepatitis B virus surface antigen mutant 145 (Glycine to Arginine) from serum samples. As a direct application, these specific DNA probes are immobilized on solid glass supports (gene chip) for detection of human hepatitis B virus surface antigen mutant 145 (Glycine to Arginine) by fluorescence.
PCT/IB2000/001079 1999-07-28 2000-07-28 Detection of human hepatitis b virus surface antigen mutants by specific amplification and its application on gene chip Ceased WO2001007652A2 (en)

Priority Applications (4)

Application Number Priority Date Filing Date Title
EP00949838A EP1250464B1 (en) 1999-07-28 2000-07-28 Detection of human hepatitis b virus surface antigen mutants by specific amplification and its application on gene chip
DE60033567T DE60033567D1 (en) 1999-07-28 2000-07-28 DETECTION OF HUMAN HEPATITIS B VIRUS SURFACES ANTIGEN MUTANTS BY MEANS OF SPECIFIC AMPLIFICATION AND ITS APPLICATION IN CONNECTION WITH GENCHIPS
AU63097/00A AU6309700A (en) 1999-07-28 2000-07-28 Detection of human hepatitis b virus surface antigen mutants by specific amplification and its application on gene chip
CA002391824A CA2391824A1 (en) 1999-07-28 2000-07-28 Detection of human hepatitis b virus surface antigen mutants by specific amplification and its application on gene chip

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US09/362,394 US6759193B2 (en) 1999-07-28 1999-07-28 Detection of human hepatitis B virus surface antigen mutants by specific amplification and its application on gene chip
US09/362,394 1999-07-28

Publications (2)

Publication Number Publication Date
WO2001007652A2 WO2001007652A2 (en) 2001-02-01
WO2001007652A3 true WO2001007652A3 (en) 2001-12-20

Family

ID=23425951

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/IB2000/001079 Ceased WO2001007652A2 (en) 1999-07-28 2000-07-28 Detection of human hepatitis b virus surface antigen mutants by specific amplification and its application on gene chip

Country Status (8)

Country Link
US (1) US6759193B2 (en)
EP (1) EP1250464B1 (en)
AT (1) ATE354680T1 (en)
AU (1) AU6309700A (en)
CA (1) CA2391824A1 (en)
DE (1) DE60033567D1 (en)
MY (1) MY128619A (en)
WO (1) WO2001007652A2 (en)

Families Citing this family (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
DK1284296T3 (en) * 2000-04-27 2007-02-05 Consejo Superior Investigacion Method for detection of minority genomes in virus quasispecies using DNA microchips
SG90149A1 (en) * 2000-07-18 2002-07-23 Government Of The Republic Of Diagnostic assay
CA2444174A1 (en) * 2001-04-17 2002-10-24 The New York Blood Center, Inc. Universal multi-variant detection system
US20040191776A1 (en) * 2003-03-21 2004-09-30 Pei-Jer Chen Method for genotyping and quantifying Hepatitis B Virus
CN107937507B (en) * 2017-11-17 2021-06-01 中国人民解放军第三〇二医院 A kind of soluble microneedle patch and preparation method thereof

Citations (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP0020251A2 (en) * 1979-05-24 1980-12-10 The Regents Of The University Of California DNA transfer vector, host transformed with it, vaccine, and their production
WO1993013120A1 (en) * 1991-12-23 1993-07-08 Chiron Corporation Hbv amplifier probes for use in solution phase sandwich hybridization assays
WO1995011307A1 (en) * 1993-10-22 1995-04-27 Institut Pasteur Nucleotide vector, composition containing such vector and vaccine for immunization against hepatitis
WO1996040996A1 (en) * 1995-06-07 1996-12-19 Abbott Laboratories Method for detecting nucleic acid sequences using competitive amplification
US5629153A (en) * 1990-01-10 1997-05-13 Chiron Corporation Use of DNA-dependent RNA polymerase transcripts as reporter molecules for signal amplification in nucleic acid hybridization assays

Family Cites Families (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
ZA973367B (en) * 1996-04-19 1997-11-18 Innogenetics Nv Method for typing and detecting HBV.
AU6024598A (en) * 1997-01-10 1998-08-03 Pioneer Hi-Bred International, Inc. Hybridization-based genetic amplification and analysis

Patent Citations (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP0020251A2 (en) * 1979-05-24 1980-12-10 The Regents Of The University Of California DNA transfer vector, host transformed with it, vaccine, and their production
US5629153A (en) * 1990-01-10 1997-05-13 Chiron Corporation Use of DNA-dependent RNA polymerase transcripts as reporter molecules for signal amplification in nucleic acid hybridization assays
WO1993013120A1 (en) * 1991-12-23 1993-07-08 Chiron Corporation Hbv amplifier probes for use in solution phase sandwich hybridization assays
WO1995011307A1 (en) * 1993-10-22 1995-04-27 Institut Pasteur Nucleotide vector, composition containing such vector and vaccine for immunization against hepatitis
WO1996040996A1 (en) * 1995-06-07 1996-12-19 Abbott Laboratories Method for detecting nucleic acid sequences using competitive amplification

Non-Patent Citations (8)

* Cited by examiner, † Cited by third party
Title
CARIANI ET AL.: "Emergence of Hepatitis Virus S Gene Mutant in a Liver Transplant Recipient", JOURNAL OF MEDICAL VIROLOGY, vol. 47, 1995, pages 410 - 415, XP002072493 *
CHIOU ET AL.: "Altered antigenicity of 'a' determinant variants of hepatitis B virus", JOURNAL OF GENERAL VIROLOGY, vol. 78, 1997, pages 2639 - 2645, XP002174817 *
DATABASE GENBANK NCBI; 21 July 1994 (1994-07-21), PULT: "Hepatitis B virus complete genome with insertion in core promoter, 198bp insertion in X-ORF" *
DATABASE GENBANK NCBI; 24 May 1999 (1999-05-24), IRELAND ET AL.: "Reactivity of in vitro expressed hepatitis B surface antigen variants in commercial diagnostic assays", XP002174852 *
HSU ET AL.: "Surface Gene Mutants of Hepatitis B Virus in Infants Who Develop Acute or Chronic Infections Despite Immunoprophylaxis", HEPATOLOGY, vol. 26, no. 3, 1997, pages 786 - 791, XP001015747 *
OGATA ET AL.: "Infectivity and Pathogenicity in Chimpanzees of a Surface Gene Mutant of Hepatitis B Virus that Emerged in a Vaccinated Infant", THE JOURNAL OF INFECTIOUS DISEASES, vol. 175, 1997, pages 511 - 523, XP001015784 *
PULT ET AL.: "A Hepatitis B Virus Mutant With a New Hepatocyte Nuclear Factor1 Binding Site Emerging in Transplant-Transmitted Fulminant Hepatitis B", HEPATOLOGY, vol. 25, no. 6, 1997, pages 1507 - 1515, XP000872066 *
WANDS ET AL.: "Molecular Pathogenesis of liver disease during persistent hepatitis B virus infection", SEMINARS IN LIVER DISEASE, vol. 12, no. 3, 1992, pages 252 - 264, XP001015778 *

Also Published As

Publication number Publication date
ATE354680T1 (en) 2007-03-15
US20030003549A1 (en) 2003-01-02
AU6309700A (en) 2001-02-13
EP1250464A2 (en) 2002-10-23
CA2391824A1 (en) 2001-02-01
WO2001007652A2 (en) 2001-02-01
DE60033567D1 (en) 2007-04-05
MY128619A (en) 2007-02-28
EP1250464B1 (en) 2007-02-21
US6759193B2 (en) 2004-07-06

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