WO2001011041A1 - MONOMERIC PROTEIN OF THE TGF-β FAMILY - Google Patents

MONOMERIC PROTEIN OF THE TGF-β FAMILY Download PDF

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Publication number
WO2001011041A1
WO2001011041A1 PCT/EP2000/007600 EP0007600W WO0111041A1 WO 2001011041 A1 WO2001011041 A1 WO 2001011041A1 EP 0007600 W EP0007600 W EP 0007600W WO 0111041 A1 WO0111041 A1 WO 0111041A1
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Prior art keywords
protein
leu
ala
gly
arg
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PCT/EP2000/007600
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French (fr)
Inventor
Gertrud Hötten
Rolf Bechtold
Jens Pohl
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HyGene AG
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HyGene AG
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Priority to EP00958383A priority Critical patent/EP1198570B1/en
Priority to JP2001515827A priority patent/JP2003506086A/en
Priority to AT00958383T priority patent/ATE299937T1/en
Priority to US10/048,458 priority patent/US6972321B1/en
Priority to NZ517125A priority patent/NZ517125A/en
Priority to AU69927/00A priority patent/AU782481B2/en
Priority to DK00958383T priority patent/DK1198570T3/en
Priority to DE60021388T priority patent/DE60021388T2/en
Application filed by HyGene AG filed Critical HyGene AG
Priority to CA002381219A priority patent/CA2381219C/en
Publication of WO2001011041A1 publication Critical patent/WO2001011041A1/en
Anticipated expiration legal-status Critical
Priority to US10/414,954 priority patent/US20040019185A1/en
Priority to US10/734,583 priority patent/US7811793B2/en
Priority to US11/191,072 priority patent/US7569227B2/en
Ceased legal-status Critical Current

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    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07K—PEPTIDES
    • C07K14/00—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/435—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
    • C07K14/475—Growth factors; Growth regulators
    • C07K14/495—Transforming growth factor [TGF]
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61L—METHODS OR APPARATUS FOR STERILISING MATERIALS OR OBJECTS IN GENERAL; DISINFECTION, STERILISATION OR DEODORISATION OF AIR; CHEMICAL ASPECTS OF BANDAGES, DRESSINGS, ABSORBENT PADS OR SURGICAL ARTICLES; MATERIALS FOR BANDAGES, DRESSINGS, ABSORBENT PADS OR SURGICAL ARTICLES
    • A61L27/00—Materials for grafts or prostheses or for coating grafts or prostheses
    • A61L27/14—Macromolecular materials
    • A61L27/22—Polypeptides or derivatives thereof, e.g. degradation products
    • A61L27/227—Other specific proteins or polypeptides not covered by A61L27/222, A61L27/225 or A61L27/24
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P1/00—Drugs for disorders of the alimentary tract or the digestive system
    • A61P1/02—Stomatological preparations, e.g. drugs for caries, aphtae, periodontitis
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P1/00—Drugs for disorders of the alimentary tract or the digestive system
    • A61P1/04—Drugs for disorders of the alimentary tract or the digestive system for ulcers, gastritis or reflux esophagitis, e.g. antacids, inhibitors of acid secretion, mucosal protectants
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P15/00—Drugs for genital or sexual disorders; Contraceptives
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P17/00—Drugs for dermatological disorders
    • A61P17/02—Drugs for dermatological disorders for treating wounds, ulcers, burns, scars, keloids, or the like
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P19/00—Drugs for skeletal disorders
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P19/00—Drugs for skeletal disorders
    • A61P19/08—Drugs for skeletal disorders for bone diseases, e.g. rachitism, Paget's disease
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P21/00—Drugs for disorders of the muscular or neuromuscular system
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P25/00—Drugs for disorders of the nervous system
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P43/00—Drugs for specific purposes, not provided for in groups A61P1/00-A61P41/00
    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07K—PEPTIDES
    • C07K14/00—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/435—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
    • C07K14/475—Growth factors; Growth regulators
    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07K—PEPTIDES
    • C07K14/00—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/435—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
    • C07K14/575—Hormones
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K38/00—Medicinal preparations containing peptides

Definitions

  • the present invention concerns a biologically active protein from the TGF- ⁇ superfamily, wherein this protein remains in monomeric form due to substitution or deletion of a cysteine which is reponsible for the dimerization in the wild-type protein.
  • the invention concerns a nucleic acid, which codes for a protein according to the invention, an expression vector containing such nucleic acid and a host cell, containing a corresponding nucleic acid or an expression vector, said nucleic acid being suitable for the expression of the protein.
  • the invention also concerns a pharmaceutical composition containing the protein according to the invention or a nucleic acid coding therefor.
  • the use of the pharmaceutical composition according to the invention concerns the prevention or treatment of all conditions which can also be treated with the dimeric form of the corresponding protein.
  • TGF- ? superfamily Kersley, Genes and Development s, 1 33-146 ( 1 994) as well as the references cited therein
  • Such growth factors in particular comprise members of the TGF-/? (transforming growth factor, cf . e.g. Roberts and Sporn, Handbook of Experimental Pharmacology 95 ( 1 990), page 41 9-472, editors: Sporn and Roberts), the DVR-group (Hotten et al., Biochem. Biophys. Res. Comm.
  • BMPs bone morphogenetic protein, cf. e.g. Rosen and Thies, Growth Factors in Perinatal Development ( 1 993), page 39-58, editors: Tsang, Lemons and Balistreri
  • GDFs growth differentiation factors
  • the inhibin/activin cf. e.g. Vale et al., The Physiology of Reproduction, second edition (1994), page 1861-1878, editors: Knobii and Neil! and the GDNF protein family (Rosenthal, Neuron 22 (1999), page 201-203; Airaksinen et al. Mol Cell Neurosci 13 (1999), page 313-325).
  • TGF- ⁇ superfamily shows high amino acid homologies in the mature part of the protein, in particular 7 conserved cysteines, they show considerable variations in their exact functions. Often individual growth factors of these families exhibit a plurality of functions at the same time, so that their application is of interest in various medical indications. Some of these multifunctional proteins also have survival promoting effects on neurons in addition to functions such as e.g. regulation of the proliferation and differention in many cell types (Roberts and Sporn, supra; Sakurai et al., J. Biol. Chem.269 (1994), page 14118-14122). Thus e.g. trophic effects on embryonic motoric and sensory neurons were demonstrated for TGF-?
  • TGF- ⁇ proteins like TGF- ⁇ 1 , TGF- ⁇ 2, TGF- ⁇ 3, TGF-B4, TGF- ⁇ 5 (U.S.5,284,763; EP 0376785; U.S.4,886,747; DNA 7 (1988), page 1-8), EMBO J. 7 (1988), page 3737-3743), Mol. Endo.2 (1988), page 1186- 1195), J. Biol. Chem.265 (1990), page 1089-1093), OP1, OP2 and OP3 proteins (U.S. 5,011,691, U.S.
  • Other useful proteins include biologically active biosynthetic constructs including biosynthetic proteins designed using sequences from two or more known morphogenetic proteins. Examples of biosynthetic constructs are disclosed in U.S.5,011,691 (e.g. COP-1, COP-3, COP-4, COP-5, COP-7 and COP- 16). The disclosure of the cited publications including patents or patent applications are incorporated herein by reference. The occurence of proteins of the TGF- superfamily in various tissuous stages and development stages corresponds with differences with regard to their exact functions as well as target sites, life span, requirements for auxiliary factors, necessary cellular physiological environment and/or resistance to degradation.
  • the proteins of the TGF-/? superfamily exist as homodimers or heterodimers having a single disulfide bond. This disulfide bond is mediated by a specific and in most of the proteins conserved cysteine residue of the respective monomers.
  • This dimer formation is important for further polymer formation of two or more dimers to achieve intercellular signal transmission by simultaneous binding to type I and type II receptors for the TGF-/? superfamily proteins on cells. It was assumed that only this simultaneous binding to both kinds of receptors would allow for effective intercellular signal transmission for the benefit of the patient (Bone, volume 1 9 ( 1 996), page 569-574).
  • This object is solved according to the invention by a protein selected from the members of the TGF- ⁇ protein superfamily, such protein being necessarily monomeric due to substitution or deletion of a cysteine which is responsible for dimeric formation.
  • the findings of the present invention are very surprising since, as already mentioned above, it was common understanding that only a dimer of the morphogenetic proteins has biological activity. Despite this understanding the proteins according to the invention show an up to two-fold higher activity than that of the dimer on the basis of protein weight. The smaller size of the proteins of the invention, while maintaining the biological activity, can also be considered as advantageous, e.g. for applications concerning the brain since the monomeric protein can much easier pass the blood-brain-barrier than the dimeric form.
  • the proteins according to the invention encompass all proteins of the mentioned protein families that are normally present in dimeric form. Also parts of such proteins that retain substantial activity or fusion proteins or precursor forms of proteins shall be considered as encompassed by the present invention as well as biologically active naturally occurring or biosynthetic variants of TGF- ⁇ superfamily proteins, as long as they show at least considerable biological activity. ln a preferred embodiment of the present invention the monomeric protein is a mature protein or a biologically active part or variant thereof.
  • biologically active part or variant thereof is meant to define either fragments retaining activity, precursor proteins that are e.g. cleaved at the site of activity to the mature form or show biological activity themselves, or also variants that still maintain essentially the biological activity of the wild-type protein.
  • Such variants preferably contain conservative amino acid substitutions, but especially at the N-terminal part of the mature proteins even considerable deletions or substitutions do not lead to a considerable loss of biological activity. It is well within the skill of the man in the art to determine whether a certain protein shows the required biological activity. Proteins showing at least 70% and preferably at least 80% homology to the mature wild-type proteins of the above referenced protein families should be understood as encompassed by the present invention, as long as they contain the deletion or substitution of a cysteine, as required for the proteins according the invention, and therefore do not form dimers.
  • proteins according to the invention contain at least the 7 cysteine region characteristic for the TGF- ? protein superfamily.
  • This specific 7 cysteine region is considered to be the most important part of the proteins in view of the biological activity. Therefore proteins retaining this critical region are preferred proteins according to the invention. It is disclosed in the state of the art which cysteine is responsible in a certain protein family or protein for dimer formation (see for example: Schlunegger & Grutter ( 1 992) Nature 358, 430-434; Daopin et al., ( 1 992) Science 257, 369-373 and Griffith et at., Proc. Natl. Acad. Sci. 93 ( 1 996), page 878- 883) . This cysteine has to be deleted or substituted by another amino acid to form a protein according to the invention.
  • the 7 cysteine region is known for many proteins of the TGF- ? protein superfamily. In this region the respective location of the cysteine residues to each other is important and is only allowed to vary slightly in order not to lose the biological activity. Consensus sequences for such proteins are known in the state of the art and all proteins complying with such consensus sequences are considered to be encompassed by the present invention.
  • C denotes cysteine
  • Y denotes any amino acid including cysteine
  • X denotes any amino acid except cysteine.
  • the protein according to the invention contains a consensus sequence according to the following sequence
  • the protein according to the invention contains a consensus sequence according to the following sequence
  • the monomeric protein according to the invention is a morphogenetic protein.
  • TGF- ⁇ protein superfamily Most of the members of the TGF- ⁇ protein superfamily are morphogenetic proteins that are useful for treatments where regulation of differentiation and proliferation of cells or progenitor cells is of interest. This can result in replacement of damaged and/or diseased tissue like for example skeletal (bone, cartilage) tissue, connective tissue, periodontal or dental tissue, neural tissue, tissue of the sensory system, liver, pancreas, cardiac, blood vessel and renal tissue, uterine or thyroid tissue etc. Morphogenetic proteins are often useful for the treatment of ulcerative or inflammatory tissue damage and wound healing of any kind such as enhanced healing of ulcers, burns, injuries or skin grafts. Especially preferred proteins according to the invention belong to the TGF- ?, BMP, GDF, activin or GDNF families.
  • GDF-5 One preferred member of the GDF family is the protein MP52 which is also termed GDF-5 or CDMP-1 .
  • Applications for MP52 reflect several of the already described applications for the BMP/GDF family.
  • MP52 is considered to be a very effective promoter of bone and cartilage formation as well as connective tissue formation (see for example WO 95/0481 9, H ⁇ tten et al., ( 1 996), Growth Factors 1 3, 65-74, Storm et al., ( 1 994) Nature 368, 639-643, Chang et al., ( 1 994) J. Biol. Chem. 269 (45), 28227-28234).
  • MP52 is useful for applications concerning the joints between skeletal elements (see for example Storm & Kingsley ( 1 996) Development 1 22, 3969-3979) .
  • One example for connective tissue is tendon and ligament (Wolfman et al., ( 1 997), J. Clin. Invest. 1 00, 321 -330, Aspenberg & Forslund (1 999), Acta Orthop Scand 70, 51 -54, WO 95/1 6035).
  • MP52 is also useful for tooth (dental and periodontal) applications (see for example WO 95/0481 9, WO 93/1 6099, Morotome et al. ( 1 998), Biochem Biophys Res Comm 244, 85-90) .
  • MP52 is useful in wound repair of any kind.
  • MP52 in this connection is useful for applications in neurodegenerative diseases like e.g. Parkinson's disease and possibly also Alzheimer's disease for Huntington chorea tissues (see for example WO 97/031 88, Krieglstein et al., ( 1 995) J. Neurosci Res. 42, 724- 732, Sullivan et al., ( 1 997) Neurosci Lett 233, 73-76, Sullivan et al. (1 998), Eur. J. Neurosci 1 0, 3681 -3688) .
  • MP52 allows to maintain nervous function or to retain nervous function in already damaged tissues.
  • MP52 is therefore considered to be a generally applicable neurotrophic factor. It is also useful for diseases of the eye, in particular retina cornea and optic nerve (see for example WO 97/031 88, You et al. ( 1 999), Invest Opthalmol Vis Sci 40, 296-31 1 ).
  • the monomeric MP52 is expected to show all the already described activities of the dimeric form as well as some further described activities as described for the dimeric BMP/GDF family members. It is expected to be for example also useful for increasing progenitor cell populations and for stimulating differentiation of progenitor cells ex vivo.
  • Progenitor cells can be cells which take part in the cartilage formation process or hematopoietic progenitor cells. It is also useful for damaged or diseased tissue where a stimulation of angiogenesis is advantageous (see for example: Yamashita et al. ( 1 997), Exp Cell Res 235, 21 8-226).
  • An especially preferred protein according to the invention therefore is protein MP52 or a biologically active part or variant thereof.
  • MP52 can e.g. be used in its mature form, however, it can also be used as a fragment thereof at least containing the 7 cysteine region or also in a precursory form. Deviations at the N-terminal part of mature MP52 do not affect its activity to a considerable degree. Therefore, substitutions, deletions or additions on the N-terminal part of the proteins are still within the scope of the present invention. It might be useful to add a peptide to the N-terminal part of the protein, e.g. for purification reasons. It might not be necessary to cleave off this added peptide after expression and purification of the protein.
  • Additional peptides at the N- or C-terminal part of the protein may also serve for the targeting of the protein to special tissues such as nerve or bone tissue or for the penetration of the blood/brain barrier.
  • fusion proteins of a monomeric protein according to the invention and another peptide or group are considered within the scope of the present invention, wherein these other peptides or groups are directing the localization of the fusion protein, e.g. because of an affinity to a certain tissue type etc. Examples for such fusion proteins are described in WO 97/2361 2.
  • the protein containing such addition will retain its biological activity at least as long as such addition does not impair the formation of the biologically active conformation of the protein.
  • the proteins comprises the amino acid sequence according to SEQ.ID.NO.1 (DNA and protein sequence) and SEQ. ID.No.2 (protein sequence, only), respectively.
  • SEQ.ID.NO.2 shows the complete protein sequence of the prepro protein of human MP52, as already disclosed in WO 95/04819.
  • the start of the mature protein lies preferably in the area of amino acids 352-400, especially preferred at amino acids 381 or 382. Therefore, the mature protein comprises amino acids 381 -501 or 382-501 .
  • the first alanine of the mature protein can be deleted and the mature protein then preferably comprises amino acids 383-501 .
  • the cysteine at position 465 that is present in the already described dimeric MP52 protein is according to the invention either deleted or substituted by another amino acid. This deletion or substitution is represented by Xaa at the respective position in SEQ.ID.Nos. 1 and 2.
  • the activin/inhibin family proteins are of interest for applications related to contraception, fertility and pregnancy (see for example WO 94/1 9455, U.S. 5, 1 02,868) . They are also of interest for applications like repair or prevention of diseases of the nervous system, they can be used in the repair of organ tissue such as liver and even in bone and cartilage, too.
  • MP1 21 (activin ⁇ C) is especially useful in applications for growth or regeneration of damaged and/or diseased tissue, especially the liver tissue, neural tissue, skeletal tissue (see for example WO 96/01 31 6, WO 98/22492 and WO 97/031 88).
  • MP1 21 is known to be predominantly expressed in the liver whereby the mRNA is markedly reduced after partial hepatectomy.
  • MP1 21 is expected to regulate the liver mass (Zhang et al.. Endocrine Journal 44 (1 997), page 759-764).
  • the monomeric MP1 21 shows all the already described activities of the dimeric form as well as some further described activities as described for the dimeric TGF- ⁇ superfamily members. It is for example also expected to be useful in treatment of ulceration (for example stomach ulceration) and useful for integrity of gastrointestinal lining and for stimulating differentiation of progenitor cells ex vivo, treatment or preservation of mammalian tissue or cells, e.g. for organ or tissue transplantation.
  • a further preferred protein according to the invention therefore is MP1 21 , a member of the activin/inhibin protein family.
  • a biologically active part or variant thereof is encompassed by the present invention according to the above defined rules.
  • An especially preferred embodiment is shown in SEQ.ID.NO.3 (DNA and protein sequence) and SEQ.ID.NO.4 (protein sequence, only) respectively.
  • SEQ.ID.NO.4 showsthe complete amino acid sequence of the prepro protein of human MP1 21 , that has already been disclosed in WO 96/01 31 6.
  • the start of the mature protein lies preferably between amino acids 21 7 and 247, most preferred at amino acid 237.
  • a preferred mature protein therefore comprises the mature part of the protein starting at amino acid 237 and ending at amino acid 352.
  • cysteine at position 31 6 is according to the invention either deleted or substituted by another amino acid, being represented by Xaa in SEQ.ID.Nos.3 and 4.
  • the amino acid by which the cysteine residue effecting the dimerization is substitued can be selected by any amino acid that does not impair the formation of a biologically active conformation.
  • the amino acid is preferably selected from the group of alanine, serine, threonine, leucine, isoleucine, glycine and valine.
  • the proteins according to the invention are in summary characterized by the absence of the cysteine residue in the amino acid sequence responsible for the dimer formation. This absence can be effected by substitution of this cysteine by another amino acid or by deletion. In case of deletion, however, it must be assured for the protein that the formation of the biologically active conformation is not hindered. The same is true for the selection of the substitution amino acid, wherein it is preferred to use an amino acid which has a form similar to cysteine.
  • the monomeric proteins according to the invention can be easily produced, in particular by expression in prokaryots and renaturation according to known methods. It is advantageous that the protein can be obtained in exceedingly biologically active form.
  • the proteins exhibit in monomeric form about the same activity as the dimer so that based on the amount of active o substance only the same amount of the monomeric protein has to be used in order to obtain the same positive biological effects.
  • a further subject matter of the present invention is a nucleic acid encoding a protein according to the invention. It is obvious that the nucleic acid has 5 to have such a sequence that a deletion or substitution of the cysteine responsible for the dimer formation is achieved.
  • the nucleic acid can be a naturally occurring nucleic acid, but also a recombinantly produced or processed nucleic acid.
  • the nucleic acid can be both a DNA sequence and an RNA sequence, as long as the protein according to the invention can be o obtained from this nucleic acid upon expression in a suitable system.
  • the nucleic acid is a DNA sequence.
  • This DNA sequence in an especially preferred embodiment of the invention comprises a sequence as shown in SEQ.ID.NO.1 and 5 SEQ.ID.NO.3, respectively, or parts thereof.
  • SEQ.ID.NO.1 shows a nucleic acid encoding MP52, wherein the codon for the cysteine responsible for the dimer formation is replaced by another codon which does not encode cysteine or deleted. This substitution or deletion is shown as "nnn" in the sequence protocols.
  • SEQ.ID.NO.3 shows a nucleic acid encoding MP1 21 , o wherein also the codon for the cysteine effecting the dimer formation is replaced by a respective different codon or deleted.
  • SEQ.ID.NOs.1 or 3 also parts can be used that encode the mature proteins or fragments also described above.
  • the nucleic acid apart from the coding sequences also contains expression control sequences.
  • expression control sequences are known to the man skilled in the art and serve to control the expression of the encoded protein in a host cell.
  • the host cell does not have to be an isolated cell, moreover, the nucleic acid can be expressed in the patient in vivo in the target tissue. This can be done by inserting the nucleic acid into the cell genome, however, it is also possible to transform host cells with expression vectors containing a nucleic acid according to the invention.
  • Such expression vectors are a further subject matter of the present invention, wherein the nucleic acid is inserted in a suitable vector system, the vector system being selected according to the desired expression of the protein.
  • the vector system can be a eukaryotic vector system, but - in the framework of the present invention - it is preferably a prokaryotic vector system, with which the proteins can be produced in prokaryotic host cells in a particularly easy and pure manner.
  • the expression vector can be a viral vector.
  • host cells in turn are a further subject matter of the present invention.
  • the host cells are characterized in that they contain a nucleic acid according to the invention or an expression vector according to the invention and that they are able to use the information present in the nucleic acids and in the expression vector, respectively, for the expression of a monomeric protein according to the invention.
  • eukaryotic host cells are suitable for the production of the protein, it is, as mentioned already several times above, particularly advantageous that the protein according to the invention can be produced in prokaryotic host cells, which therefore represent a preferred embodiment of the present invention. After such preferred expression in prokaryotic host cells the protein is purified and renatured according to known methods, thereby effecting intramolecular cystine bridge formation.
  • a further preferred embodiment is a eukaryotic host cell, and especially a eukaryotic host cell containing the DNA in its genome, or as an expression vector.
  • Such host cell can also be useful for application to an individual in need of morphogenic treatment.
  • compositions comprising at least one monomeric protein according to the invention or at least one nucleic acid encoding for such a protein or at least one corresponding expression vector, or at least one eukaryotic host cell expressing the monomeric protein.
  • the protein itself but also a nucleic acid according to the invention, an expression vector or a host cell can be considered to be advantageous as active substances in a pharmaceutical composition.
  • combinations of monomeric proteins with either biological activities in the same or different applications, can be used in preferred pharmaceutical compositions.
  • combinations of MP52 with other TGF- ? superfamily proteins both in monomeric form, like for example with GDNF (see WO 97/031 88) .
  • combinations of TGF- ? with GDNF both in monomeric form.
  • the combination of several monomeric proteins might be useful, like MP52 with a protein of TGF-£ (see e.g.
  • WO 92/09697 or MP52 with a cartilage maintenance-inducing protein such as BMP-9 (see e.g. WO 96/391 70) .
  • a nucleic acid or an expression vector it has to be ensured that when administering to the patient there has to be an environment in which the nucleic acid and the expression vector, respectively, can be expressed and the protein according to the invention can be produced in vivo at the site of action. The same applies accordingly to the host cell according to the invention.
  • expression vectors 5 or host cells it is also possible that they encode more than one monomeric protein of the invention to produce a combination of two or more monomeric proteins.
  • the matrix material can be transplanted into the patient, e.g. surgically, wherein the protein either is effective on the surface of the matrix material or the protein or the DNA encoding the protein can be slowly released from the matrix material and then be effective over a long i s period of time.
  • a biodegradable matrix material in the pharmaceutical composition, wherein this material preferably dissolves during the protein induced tissue formation so that a protein or a nucleic acid contained therein is released and the newly formed tissue replaces the matrix material.
  • a matrix material which is itself e.g. osteogenically active.
  • a matrix material which is itself e.g. osteogenically active.
  • An especially preferred matrix material that can be used according to the invention is a matrix material as described in U.S. 5,231 , 1 69 and U.S. 5,776, 1 93 and especially for applications like spinal fusion.
  • a combination of a matrix material and protein and/or nucleic acid and/or expression vector it is preferable to sterilize such a combination prior to its use.
  • the matrix and the morphogenetic protein can be separately sterilized and then combined, but it is preferred to terminally sterilize the device consisting of matrix and morphogenetic protein. Terminal sterilization can be achieved by ionizing radation as already described for dimeric proteins (U.S. 5,674,292) but it is also advantageous to use ethylene oxide.
  • this invention also comprises pharmaceutical compositions containing further substances like e.g. pharmacologically acceptable auxiliary and carrier substances.
  • the protein according to the invention also in case a matrix material is used, does not necessarily have to be used together with this matrix material, but can also be administered systemically, wherein it concentrates preferably in the surrounding of an implanted matrix material.
  • the protein according to the invention and the nucleic acid forming this protein, respectively or the expression vector or host cell can preferably be present in an injectable composition.
  • Implants are not necessary or possible for every form of application of the proteins according to the invention.
  • the pharmaceutical composition according to the invention can also contain other vehicles which make it possible that the proteins or the nucleic acids or the expression vectors encoding these proteins be transported to the site of activity and released there, wherein e.g. liposomes or nanospheres can be used.
  • host cells like e.g. implanted embryonic cells expressing the proteins.
  • Cells transfected with recombinant DNA may be encapusled prior to implantation.
  • Any other practicable but herein not explicitly described form of application of the pharmaceutical composition according the invention and their corresponding manufacture are also comprised by the present invention, as long as they contain a protein according to the invention or a nucleic acid or an expression vector coding therefor, or a host cell expressing it.
  • compositions according to the invention can be used in any desired way, the pharmaceutical compositions are formulated preferably for surgical local application, topical or systemic application. Auxiliary substances for the individual application form can of course be present in the pharmaceutical composition according to the invention.
  • Vitamin D WO 92/21 365
  • parathyroid hormone related peptide WO 97/35607
  • chordin WO 98/ 21 335
  • anti-fibrinolytic agent EP 535091
  • anti-metabolites WO 95/09004
  • alkyl cellulose WO 93/00050
  • mannitol WO 98/33514
  • sugar glycine
  • glutamic acid hydrochloride U.S. 5,385,887
  • antibiotics antiseptics
  • amino acids and/or additives which improve the solubility or stablility of the monomeric morphogenetic protein as for example nonionic detergents (e.g. Tween 80), basic amino acids, carrier proteins (e.g. serum albumin), full length propeptides of the TGF-/? superfamily or parts thereof.
  • the proteins according to the invention and respective nucleic acids which provide for an expression of the proteins at the site of activity, can advantageously be applied in all areas for which also the dimeric forms of the proteins, as described, can be applied.
  • a pharmaceutical composition according to the present invention for the treatment or prevention of any indications of the dimeric forms of the proteins according to the invention.
  • Fig. 1 A shows a two dimensional graph of the conformation of recombinantly produced dimeric MP52 with the deleted first alanine.
  • the 7 cysteine bridges contained in a dimer are shown, wherein there are 3 intramolecular cystine bridges per monomer unit and 1 intermolecular cystine brigde connecting both monomers.
  • Fig. 1 B shows the monomeric protein according to the invention wherein the cysteine of the amino acid sequence of MP52 has been replaced by X that denotes any amino acid except cysteine.
  • the mature part of human MP52 was mutated by converting Cysteine to Alanine at position 465 of SEQ ID NO 2.
  • the nucleotides at the position 2032 and 2033 of SEQ ID NO 1 were converted from TG to GC.
  • the substitution of the nucleotides was performed by using the prokaryotic plasmid pBP2MP52m and a PCR method.
  • the vector pBP2MP52m is a derivative of the pBR322 plasmid containing an ampicillin resistance gene, a T7-promoter followed by a ribosomal binding site, a start codon, the mature part of MP52 (coding for the amino acids 382-501 in SEQ ID NO. 2 with a Cysteine at position 465), stop codons in each reading frame and a terminator.
  • the plasmid was deposited at the DSM (DSM 1 0029, 2nd June 1 995) .
  • the mutation was performed by using the QuickChangeTM Site-Directed Mutagenesis Kit with the PfuTurboTM DNA polymerase and the Dpn I endonuclease from Stratagene (Catalog #20051 8) according to the instruction manual of the manufacturer.
  • the oligonucleotide CCACACCACCCACCGCCTGTGTGCCCACGC (SEQ ID NO. 5) and the oligonucleotide GCGTGGGCACACAGGCGGTGGGTGGTGTGG (SEQ ID NO. 6) were purified by polyacrylamide gel electrophoresis and used as the mutagenic primers.
  • the resulting plasmid pBP2MP52 ALA contained after the start codon the nucleotide sequence coding for the amino acids 382-501 in SEQ ID NO. 2 with an Alanine at position 465 which was verified by sequencing.
  • monomeric MP52 can be induced by providing a source of T7 RNA polymerase.
  • monomeric MP52 can be expressed in inclusion bodies which can be isolated according to standard procedures. Further purification was done on a reversed phase column (Nucleosil 300-7C4, Machery-Nagel) with a 0 to 50% buffer B gradient (buffer A: 0.1 % TFA in water, buffer B: 90% acetonitrile, 0.1 % TFA) in 50 minutes (flow rate: 2 ml/min) .
  • the fractions containing monomeric MP52 were pooled, lyophilized and stored at -70°C.
  • MP52 was solubilized in a denaturing buffer (6M Urea, 500 mM NaCI, 1 0 mM DTT, 1 mM EDTA , 20 mM Tris pH 8.3) and added for refolding in 9 times of a 50 mM Glycine-buffer system (pH 9.8) containing CHAPS (20 mM), NaCI (500 mM) and 3 mM GSSG and gently stirred at 4°C. After approximately 24 hours the sample was diluted 2.8 times with 14 mM NaH 2 P0 4 and subjected to isoelectric precipitation.
  • MP52 was loaded on a column (Aquapore Octyl 20 micron, Applied Biosystems) equilibrated with 25% buffer B (buffer A: 0.1 % TFA in water, buffer B: 90% acetonitrile, 0.1 % TFA) .
  • Monomeric MP52 was eluted with a 25-60% buffer B gradient in 70 minutes (flow rate 3 ml/min). Fractions containing purified refolded monomeric MP52 were pooled, lyophilized, stored at -70°C and can be used in biological activity studies.
  • Useful for biological activity studies of monomeric MP52 in the field of cartilage and bone induction are for example the measurement of increasing ALP activity (Takuwa et al.. Am. J. Physiol. 257, E797-E803, 1 989) using osteoprogenitor-like ROB-C26 cells (Yamaguchi et al., Calcif. Tissue Int. 49, 221 -225, 1 991 ) as described in WO95/0481 9 or ATDC5 cells (Riken Gene Bank, RCB 0565, embryonic cells which differentiate like cartilage cells) .
  • Useful activity tests showing the neurological capacities of refolded monomeric MP52 are the measurement of increased survival of dopaminergic neurons as described for example by Krieglstein et al. (J. Neuroscience Res. 42, 724-732, 1 995) or Sullivan et al. (Neuroscience Letters 233, 73-76, 1 997) or the outgrowth of nerve fibers from embryonic retina are described for example in the WO 97/031 88.
  • the angiogenic potential of folded monomeric MP52 can be verified for example in an in vivo corneal micropocket model. Briefly, Hydron can be used as a slow release pellet adapted from D ' Amato et al (Proc. Natl. Acad. Sci.
  • an intrastromal tunnel starting from a perpendicular linear incision in the pupillary plane and ending 2.75 mm prior to the limbus can be created.
  • erythromycin ointment should be given onto the surface of the cornea.
  • the outgrowth towards the pellet can reflect the chemotactic response of the endothelial cells to the released MP52 and can be quantified by measuring the vascularized area and the number of vessels at the limbus .
  • Monomeric MP52 isolated and purified from inclusion bodies but not subjected to the refolding process can be used as a negative control.
  • Dimeric MP52 can be used as the positive control.
  • the mature part of human MP121 was mutated by converting Cysteine to Alanine at position 316 of SEQ ID NO 4.
  • the nucleotides at position 1073 and 1074 of SEQ ID NO. 3 were converted from TG to GC.
  • the substitution of the nucleotides was performed essentially as described for MP52 in the above example with differences in the plasmid and the mutagenic primers.
  • the pBP4MP121m plasmid was used which differs from the pBP2MP52m plasmid by containing the mature part of MP121 (coding for the amino acids 237-352 in SEQ ID NO.
  • oligonucleotide CTGGAGGGGGCTCAGCCTGTGTACCCACGG SEQ ID NO. 7
  • oligonucleotide CCGTGGGTACACAGGCTGAGCCCCCTCCAG SEQ ID NO. 8
  • the resulting plasmid pBP4MP121 ALA contained after the start codon the nucleotide sequence coding for the amino acids 237-352 in SEQ ID NO.4 with an Alanine at position 316 which was verified by sequencing.
  • the cells have to be washed prior to incubation with fresh serum-free medium containing 0. 1 nM insulin. 0. 1 % BSA and 1 nM EGF.
  • the solubilized refolded monomeric MP1 21 can be added to the medium at various concentrations and subsequently the hepatocytes have to be incubated for 72h including 0.5 ⁇ Ci [ 3 H]Thymidine/ml for the last 24 hours as described by Mead & Fausto (Proc. Natl. Acad. Sci. USA 86, 1 558- 1 5562 ( 1 989)).
  • [ 3 H]Thymidine incorporation into trichloracetic acid- precitable material can be measured as described by McNiel et al. (J. Cell Biol. 1 01 , 372-379 ( 1 985)).
  • Stimulation of hematopoiesis can be determined for examples on bone marrow aspirate cultures as described in example 8 of W098/22492.
  • tgc act gtg ttg ggt gcc cct gac ttg ggc cag aga ccc cag ggg 750 He Cys Thr Val Leu Gly Ala Pro Asp Leu Gly Gin Arg Pro Gin Gly
  • ttc age cag egg cga aaa egg egg gcc cca ctg gcc act cgc cag ggc 1806 Phe Ser Gin Arg Arg Lys Arg Arg Ala Pro Leu Ala Thr Arg Gin Gly 375 380 385
  • ctt gag tac gag get ttc cac tgc gag ggg ctg tgc gag ttc cca ttg 1950 Leu Glu Tyr Glu Ala Phe His Cys Glu Gly Leu Cys Glu Phe Pro Leu 425 430 435
  • gaa tgt gaa ate ate age ttt get gag aca ggc etc tec ace ate aac 457 Glu Cys Glu He He Ser Phe Ala Glu Thr Gly Leu Ser Thr He Asn 95 100 105 110 cag act cgt ctt gat ttt cac ttc tec tct gat aga act get ggt gac 505 Gin Thr Arg Leu Asp Phe His Phe Ser Ser Asp Arg Thr Ala Gly Asp 115 120 125
  • aat ace aac etc ace ttg get act cag tac ctg ctg gag gtg gat gcc 649 Asn Thr Asn Leu Thr Leu Ala Thr Gin Tyr Leu Leu Glu Val Asp Ala 160 165 170

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Abstract

The present invention is concerned with proteins selected from the members of the TGF-β superfamily, which are monomeric due to substitution or deletion of a cysteine which is responsible for dimer formation. The invention is also concerned with nucleic acids, encoding such monomeric proteins, vectors or host cells containing the nucleic acids as well as with pharmaceutical compositions comprising the proteins or nucleic acids encoding the proteins. The pharmaceutical compositions can be applied advantageously for all indications for which the respective dimeric proteins are useful.

Description

Monomeric Protein of the TGF-β Family
Description
The present invention concerns a biologically active protein from the TGF-β superfamily, wherein this protein remains in monomeric form due to substitution or deletion of a cysteine which is reponsible for the dimerization in the wild-type protein. Further the invention concerns a nucleic acid, which codes for a protein according to the invention, an expression vector containing such nucleic acid and a host cell, containing a corresponding nucleic acid or an expression vector, said nucleic acid being suitable for the expression of the protein. The invention also concerns a pharmaceutical composition containing the protein according to the invention or a nucleic acid coding therefor. The use of the pharmaceutical composition according to the invention concerns the prevention or treatment of all conditions which can also be treated with the dimeric form of the corresponding protein.
Many growth factors from the TGF- ? superfamily (Kingsley, Genes and Development s, 1 33-146 ( 1 994) as well as the references cited therein) are relevant for a wide range of medical treatment methods and applications which in particular concern promotion of cell proliferation and tissue formation, including wound healing and tissue reproduction. Such growth factors in particular comprise members of the TGF-/? (transforming growth factor, cf . e.g. Roberts and Sporn, Handbook of Experimental Pharmacology 95 ( 1 990), page 41 9-472, editors: Sporn and Roberts), the DVR-group (Hotten et al., Biochem. Biophys. Res. Comm. 206 ( 1 995), page 608-61 3 and further literature cited therein) including BMPs (bone morphogenetic protein, cf. e.g. Rosen and Thies, Growth Factors in Perinatal Development ( 1 993), page 39-58, editors: Tsang, Lemons and Balistreri) and GDFs (growth differentiation factors), the inhibin/activin (cf. e.g. Vale et al., The Physiology of Reproduction, second edition (1994), page 1861-1878, editors: Knobii and Neil!) and the GDNF protein family (Rosenthal, Neuron 22 (1999), page 201-203; Airaksinen et al. Mol Cell Neurosci 13 (1999), page 313-325). Although the members of the TGF-β superfamily show high amino acid homologies in the mature part of the protein, in particular 7 conserved cysteines, they show considerable variations in their exact functions. Often individual growth factors of these families exhibit a plurality of functions at the same time, so that their application is of interest in various medical indications. Some of these multifunctional proteins also have survival promoting effects on neurons in addition to functions such as e.g. regulation of the proliferation and differention in many cell types (Roberts and Sporn, supra; Sakurai et al., J. Biol. Chem.269 (1994), page 14118-14122). Thus e.g. trophic effects on embryonic motoric and sensory neurons were demonstrated for TGF-? in vitro (Martinou et al., Devi. Brain Res.52, page 175-181 (1990) and Chalazonitis et al., Dev. Biol.152, page 121-132 (1992)). In addition, effects promoting survival are shown for dopaminergic neurons of the mid-brain for the proteins TGF-/?-1, -2, -3, activin A and GDNF (glial cell line-derived neurotrophic factor), a protein which has structural similarities to TGF-/? superfamily members, these effects being not mediated via astrocytes (Krieglstein et al., EMBO J. 14, page 736-742 (1995)).
Interesting members of the TGF-β superfamily or active variants thereof comprise the TGF-β proteins like TGF-β1 , TGF-β2, TGF-β3, TGF-B4, TGF-β5 (U.S.5,284,763; EP 0376785; U.S.4,886,747; DNA 7 (1988), page 1-8), EMBO J. 7 (1988), page 3737-3743), Mol. Endo.2 (1988), page 1186- 1195), J. Biol. Chem.265 (1990), page 1089-1093), OP1, OP2 and OP3 proteins (U.S. 5,011,691, U.S. 5,652,337, WO 91/05802) as well as BMP2, BMP3, BMP4 (WO 88/00205, U.S.5,013,649 and WO 89/10409, Science 242 (1988), page 1528-1534), BMP5, BMP6 and BMP-7 (OP1) (Proc. Natl. Acad. Sci.87 (1990), page 9841-9847, WO 90/11366), BMP8 (OP2) (WO 91/18098), BMP9 (WO 93/00432), BMP10 (WO 94/26893), BMP11 (WO 94/26892), BMP12 (WO 95/16035), BMP13 (WO95/16035), BMP15 (WO 96/36710), BMP16 (WO 98/12322), BMP3b (Biochem. Biophys. Res. Comm.219 (1996), page 656-662), GDF1 (WO 92/00382 and Proc. Natl. Acad. Sci. 88 (1991), page 4250-4254), GDF8 (WO 94/21681), GDF10 (WO95/10539), GDF11 (WO 96/01845), GDF5 (CDMP1, MP52) (WO 95/04819; WO96/01316; WO 94/15949, WO 96/14335 and WO 93/16099 and Nature 368 (1994), page 639-643), GDF6 (CDMP2, BMP13) (WO 95/01801 , WO 96/14335 and WO95/16035), GDF7 (CDMP3, BMP12) (WO 95/01802 and WO 95/10635), GDF14 (WO 97/36926), GFD15 (WO 99/06445), GDF16 (WO 99/06556), 60A (Proc. Natl. Acad. Sci. 88 (1991), page 9214-9218), DPP (Nature 325 (1987), page 81-84), Vgr-1 (Proc. Natl. Acad. Sci.86 (1989), page 4554- 4558) Vg-1 , (Cell 51 (1987), page 861-867), dorsalin (Cell 73 (1993), page 687-702), MIS (Cell 45 (1986), page 685-698), pCL13 (WO 97/00958), BIP (WO 94/01557), inhibin a, activin βA and activin βB (EP 0222491), activin βC (MP121 ) (WO 96/01316), activin βE and GDF12 (WO 96/02559 and WO 98/22492), activin βD (Biochem. Biophys. Res. Comm. 210 (1995), page 581-588), GDNF (Science 260 (1993), page 1130-1132, WO 93/06116), Neurturin (Nature 384 (1996), page 467-470), Persephin (Neuron 20 (1998), page 245-253, WO 97/33911), Artemin (Neuron 21 (1998), page 1291-1302), Mic-1 (Proc. Natl. Acad. Sci USA 94 (1997), page 11514-11519), Univin (Dev. Biol.166(1994), page 149-158), ADMP (Development 121 (1995), page 4293-4301), Nodal (Nature 361 (1993), page 543-547), Screw (Genes Dev. 8 (1994), page 2588-2601). Other useful proteins include biologically active biosynthetic constructs including biosynthetic proteins designed using sequences from two or more known morphogenetic proteins. Examples of biosynthetic constructs are disclosed in U.S.5,011,691 (e.g. COP-1, COP-3, COP-4, COP-5, COP-7 and COP- 16). The disclosure of the cited publications including patents or patent applications are incorporated herein by reference. The occurence of proteins of the TGF- superfamily in various tissuous stages and development stages corresponds with differences with regard to their exact functions as well as target sites, life span, requirements for auxiliary factors, necessary cellular physiological environment and/or resistance to degradation.
The proteins of the TGF-/? superfamily exist as homodimers or heterodimers having a single disulfide bond. This disulfide bond is mediated by a specific and in most of the proteins conserved cysteine residue of the respective monomers. Up to now it was considered as indispensible for the biological activity that the protein is present in its dimeric form. Several publications indicated that biological activity can only be obtained for dimeric proteins and it was speculated that this dimer formation is important for further polymer formation of two or more dimers to achieve intercellular signal transmission by simultaneous binding to type I and type II receptors for the TGF-/? superfamily proteins on cells. It was assumed that only this simultaneous binding to both kinds of receptors would allow for effective intercellular signal transmission for the benefit of the patient (Bone, volume 1 9 ( 1 996), page 569-574).
A disadvantage of the use of these proteins as medicaments and their production is, that they are not readily obtainable in biologically active and sufficiently pure form by recombinant expression in prokaryots without intensive renaturation procedures.
Thus it was the object of the present invention to provide a simple and inexpensive possibility to reproducibly produce proteins exhibiting high biological activity, wherein this biological activity should essentially correspond to that of the dimers of the proteins of said families.
This object is solved according to the invention by a protein selected from the members of the TGF-β protein superfamily, such protein being necessarily monomeric due to substitution or deletion of a cysteine which is responsible for dimeric formation.
Surprisingly it has been found that the substitution or deletion of the cysteine, which normally effects the dimerization in the proteins, results upon expression and correct folding (proper formation of the intramolecular disulfide bridges) in a monomeric protein that retains the biological activity of the dimeric form. Even more surprisingly, it was found that at least some of the monomeric proteins show a higher activity, based on the weight of protein, than their respective dimeric forms. Apart from this improved biological activity an important advantage for the proteins according to the invention is that they can be expressed in a large amount in prokaryotic hosts and upon simple refolding of the monomers they are obtained in high purity and very high yield without the need to separate dimerized from non- dimerized (monomeric) protein. The findings of the present invention are very surprising since, as already mentioned above, it was common understanding that only a dimer of the morphogenetic proteins has biological activity. Despite this understanding the proteins according to the invention show an up to two-fold higher activity than that of the dimer on the basis of protein weight. The smaller size of the proteins of the invention, while maintaining the biological activity, can also be considered as advantageous, e.g. for applications concerning the brain since the monomeric protein can much easier pass the blood-brain-barrier than the dimeric form.
The proteins according to the invention encompass all proteins of the mentioned protein families that are normally present in dimeric form. Also parts of such proteins that retain substantial activity or fusion proteins or precursor forms of proteins shall be considered as encompassed by the present invention as well as biologically active naturally occurring or biosynthetic variants of TGF-β superfamily proteins, as long as they show at least considerable biological activity. ln a preferred embodiment of the present invention the monomeric protein is a mature protein or a biologically active part or variant thereof. The term "biologically active part or variant thereof" is meant to define either fragments retaining activity, precursor proteins that are e.g. cleaved at the site of activity to the mature form or show biological activity themselves, or also variants that still maintain essentially the biological activity of the wild-type protein. Such variants preferably contain conservative amino acid substitutions, but especially at the N-terminal part of the mature proteins even considerable deletions or substitutions do not lead to a considerable loss of biological activity. It is well within the skill of the man in the art to determine whether a certain protein shows the required biological activity. Proteins showing at least 70% and preferably at least 80% homology to the mature wild-type proteins of the above referenced protein families should be understood as encompassed by the present invention, as long as they contain the deletion or substitution of a cysteine, as required for the proteins according the invention, and therefore do not form dimers.
It is especially preferred that proteins according to the invention contain at least the 7 cysteine region characteristic for the TGF- ? protein superfamily.
This specific 7 cysteine region is considered to be the most important part of the proteins in view of the biological activity. Therefore proteins retaining this critical region are preferred proteins according to the invention. It is disclosed in the state of the art which cysteine is responsible in a certain protein family or protein for dimer formation (see for example: Schlunegger & Grutter ( 1 992) Nature 358, 430-434; Daopin et al., ( 1 992) Science 257, 369-373 and Griffith et at., Proc. Natl. Acad. Sci. 93 ( 1 996), page 878- 883) . This cysteine has to be deleted or substituted by another amino acid to form a protein according to the invention.
The 7 cysteine region is known for many proteins of the TGF- ? protein superfamily. In this region the respective location of the cysteine residues to each other is important and is only allowed to vary slightly in order not to lose the biological activity. Consensus sequences for such proteins are known in the state of the art and all proteins complying with such consensus sequences are considered to be encompassed by the present invention.
In an especially preferred embodiment of the present invention the protein contains a consensus sequence according to the following sequence
C (Y)25.29 C Y Y Y C (Y)25.35 X C (Y)27.34 C Y C (Formula I),
wherein C denotes cysteine, Y denotes any amino acid including cysteine and X denotes any amino acid except cysteine.
More preferably the protein according to the invention contains a consensus sequence according to the following sequence
C (Y)28 C Y Y Y C (Y)30.32 X C (Y)31 C Y C (Formula II), wherein C, X and Y have the same meaning as defined above.
Even more preferably the protein according to the invention contains a consensus sequence according to the following sequence
C (X)28 C X X X C (X)31.33 C (X)31 C X C (Formula III), wherein C and X have the same meaning as defined above.
In these consensus sequences especially preferred distances between the respective cysteine residues are contained, wherein also already the dimer forming cysteine is substituted by another amino acid. As with all proteins of said protein superfamily the location of and distance between the cysteines is more important than the identity of the other amino acids contained in this region. Therefore, the consensus sequence shows the respective location of the cysteines, but does not show the identity of the other amino acids, since these other amino acids are widely variable in the proteins of the TGF- ? protein superfamily.
In a preferred embodiment of the present invention the monomeric protein according to the invention is a morphogenetic protein.
Most of the members of the TGF-β protein superfamily are morphogenetic proteins that are useful for treatments where regulation of differentiation and proliferation of cells or progenitor cells is of interest. This can result in replacement of damaged and/or diseased tissue like for example skeletal (bone, cartilage) tissue, connective tissue, periodontal or dental tissue, neural tissue, tissue of the sensory system, liver, pancreas, cardiac, blood vessel and renal tissue, uterine or thyroid tissue etc. Morphogenetic proteins are often useful for the treatment of ulcerative or inflammatory tissue damage and wound healing of any kind such as enhanced healing of ulcers, burns, injuries or skin grafts. Especially preferred proteins according to the invention belong to the TGF- ?, BMP, GDF, activin or GDNF families. Several BMP proteins which were originally discovered by their ability to induce bone formation, have been described, as also indicated above. Meanwhile, several additional functions have been found as it is also true for members of the GDFs. These proteins show a very broad field of applications and especially are in addition to their bone and cartilage growth promoting activity (see for example: WO 88/00205, WO 90/1 1 366, WO 91 /05802) useful in periodontal disease, for inhibiting periodontal and tooth tissue loss, for sealing tooth cavities, for enhancing integration of a tooth in a tooth socket (see for example: WO 96/26737, WO 94/06399, WO 95/2421 0), for connective tissue such as tendon or ligament (see for example: WO 95/1 6035), for improving survival of neural cells, for inducing growth of neural cells and repairing neural defects, for damaged CNS tissue due to stroke or trauma (see for example: WO 97/34626, WO 94/03200, WO 95/05846), for maintaining or restoring sensory perception (see for example WO 98/20890, WO 98/20889), for renal failure (see for example: WO 97/41 880, WO 97/41 881 ), for liver regeneration (see for example WO 94/06449), for regeneration of myocardium (see for example WO 98/27995), for treatment or preservation of tissues or cells for organ or tissue transplantation, for integrity of gastrointestinal lining (see for example WO 94/06420), for increasing progenitor cell population as for example hematopoietic progenitor cells by ex vivo stimulation (see for example WO 92/1 5323), etc. One preferred member of the GDF family is the protein MP52 which is also termed GDF-5 or CDMP-1 . Applications for MP52 reflect several of the already described applications for the BMP/GDF family. MP52 is considered to be a very effective promoter of bone and cartilage formation as well as connective tissue formation (see for example WO 95/0481 9, Hδtten et al., ( 1 996), Growth Factors 1 3, 65-74, Storm et al., ( 1 994) Nature 368, 639-643, Chang et al., ( 1 994) J. Biol. Chem. 269 (45), 28227-28234). In this connection MP52 is useful for applications concerning the joints between skeletal elements (see for example Storm & Kingsley ( 1 996) Development 1 22, 3969-3979) . One example for connective tissue is tendon and ligament (Wolfman et al., ( 1 997), J. Clin. Invest. 1 00, 321 -330, Aspenberg & Forslund (1 999), Acta Orthop Scand 70, 51 -54, WO 95/1 6035). MP52 is also useful for tooth (dental and periodontal) applications (see for example WO 95/0481 9, WO 93/1 6099, Morotome et al. ( 1 998), Biochem Biophys Res Comm 244, 85-90) . MP52 is useful in wound repair of any kind. It is in addition very useful for promoting tissue growth in the neuronal system and survival of dopaminergic neurons, for example. MP52 in this connection is useful for applications in neurodegenerative diseases like e.g. Parkinson's disease and possibly also Alzheimer's disease for Huntington chorea tissues (see for example WO 97/031 88, Krieglstein et al., ( 1 995) J. Neurosci Res. 42, 724- 732, Sullivan et al., ( 1 997) Neurosci Lett 233, 73-76, Sullivan et al. (1 998), Eur. J. Neurosci 1 0, 3681 -3688) . MP52 allows to maintain nervous function or to retain nervous function in already damaged tissues. MP52 is therefore considered to be a generally applicable neurotrophic factor. It is also useful for diseases of the eye, in particular retina cornea and optic nerve (see for example WO 97/031 88, You et al. ( 1 999), Invest Opthalmol Vis Sci 40, 296-31 1 ). The monomeric MP52 is expected to show all the already described activities of the dimeric form as well as some further described activities as described for the dimeric BMP/GDF family members. It is expected to be for example also useful for increasing progenitor cell populations and for stimulating differentiation of progenitor cells ex vivo. Progenitor cells can be cells which take part in the cartilage formation process or hematopoietic progenitor cells. It is also useful for damaged or diseased tissue where a stimulation of angiogenesis is advantageous (see for example: Yamashita et al. ( 1 997), Exp Cell Res 235, 21 8-226).
An especially preferred protein according to the invention therefore is protein MP52 or a biologically active part or variant thereof. Like in the already above mentioned definition of these terms MP52 can e.g. be used in its mature form, however, it can also be used as a fragment thereof at least containing the 7 cysteine region or also in a precursory form. Deviations at the N-terminal part of mature MP52 do not affect its activity to a considerable degree. Therefore, substitutions, deletions or additions on the N-terminal part of the proteins are still within the scope of the present invention. It might be useful to add a peptide to the N-terminal part of the protein, e.g. for purification reasons. It might not be necessary to cleave off this added peptide after expression and purification of the protein. Additional peptides at the N- or C-terminal part of the protein may also serve for the targeting of the protein to special tissues such as nerve or bone tissue or for the penetration of the blood/brain barrier. Generally, also fusion proteins of a monomeric protein according to the invention and another peptide or group are considered within the scope of the present invention, wherein these other peptides or groups are directing the localization of the fusion protein, e.g. because of an affinity to a certain tissue type etc. Examples for such fusion proteins are described in WO 97/2361 2. The protein containing such addition will retain its biological activity at least as long as such addition does not impair the formation of the biologically active conformation of the protein.
In an especially preferred embodiment of the present invention the proteins comprises the amino acid sequence according to SEQ.ID.NO.1 (DNA and protein sequence) and SEQ. ID.No.2 (protein sequence, only), respectively. SEQ.ID.NO.2 shows the complete protein sequence of the prepro protein of human MP52, as already disclosed in WO 95/04819. The start of the mature protein lies preferably in the area of amino acids 352-400, especially preferred at amino acids 381 or 382. Therefore, the mature protein comprises amino acids 381 -501 or 382-501 . The first alanine of the mature protein can be deleted and the mature protein then preferably comprises amino acids 383-501 . The cysteine at position 465 that is present in the already described dimeric MP52 protein is according to the invention either deleted or substituted by another amino acid. This deletion or substitution is represented by Xaa at the respective position in SEQ.ID.Nos. 1 and 2.
The activin/inhibin family proteins are of interest for applications related to contraception, fertility and pregnancy (see for example WO 94/1 9455, U.S. 5, 1 02,868) . They are also of interest for applications like repair or prevention of diseases of the nervous system, they can be used in the repair of organ tissue such as liver and even in bone and cartilage, too. In this connection MP1 21 (activin βC) is especially useful in applications for growth or regeneration of damaged and/or diseased tissue, especially the liver tissue, neural tissue, skeletal tissue (see for example WO 96/01 31 6, WO 98/22492 and WO 97/031 88). MP1 21 is known to be predominantly expressed in the liver whereby the mRNA is markedly reduced after partial hepatectomy. MP1 21 is expected to regulate the liver mass (Zhang et al.. Endocrine Journal 44 (1 997), page 759-764). The monomeric MP1 21 shows all the already described activities of the dimeric form as well as some further described activities as described for the dimeric TGF-β superfamily members. It is for example also expected to be useful in treatment of ulceration (for example stomach ulceration) and useful for integrity of gastrointestinal lining and for stimulating differentiation of progenitor cells ex vivo, treatment or preservation of mammalian tissue or cells, e.g. for organ or tissue transplantation.
A further preferred protein according to the invention therefore is MP1 21 , a member of the activin/inhibin protein family. Also for this protein a biologically active part or variant thereof is encompassed by the present invention according to the above defined rules. An especially preferred embodiment is shown in SEQ.ID.NO.3 (DNA and protein sequence) and SEQ.ID.NO.4 (protein sequence, only) respectively. SEQ.ID.NO.4showsthe complete amino acid sequence of the prepro protein of human MP1 21 , that has already been disclosed in WO 96/01 31 6. The start of the mature protein lies preferably between amino acids 21 7 and 247, most preferred at amino acid 237. A preferred mature protein therefore comprises the mature part of the protein starting at amino acid 237 and ending at amino acid 352. However, also the precursor protein comprising the whole shown amino acid sequence is encompassed by the present invention. The cysteine at position 31 6 is according to the invention either deleted or substituted by another amino acid, being represented by Xaa in SEQ.ID.Nos.3 and 4.
The amino acid by which the cysteine residue effecting the dimerization is substitued can be selected by any amino acid that does not impair the formation of a biologically active conformation. The amino acid is preferably selected from the group of alanine, serine, threonine, leucine, isoleucine, glycine and valine.
The proteins according to the invention are in summary characterized by the absence of the cysteine residue in the amino acid sequence responsible for the dimer formation. This absence can be effected by substitution of this cysteine by another amino acid or by deletion. In case of deletion, however, it must be assured for the protein that the formation of the biologically active conformation is not hindered. The same is true for the selection of the substitution amino acid, wherein it is preferred to use an amino acid which has a form similar to cysteine.
5 The monomeric proteins according to the invention can be easily produced, in particular by expression in prokaryots and renaturation according to known methods. It is advantageous that the protein can be obtained in exceedingly biologically active form. The proteins exhibit in monomeric form about the same activity as the dimer so that based on the amount of active o substance only the same amount of the monomeric protein has to be used in order to obtain the same positive biological effects.
A further subject matter of the present invention is a nucleic acid encoding a protein according to the invention. It is obvious that the nucleic acid has 5 to have such a sequence that a deletion or substitution of the cysteine responsible for the dimer formation is achieved. The nucleic acid can be a naturally occurring nucleic acid, but also a recombinantly produced or processed nucleic acid. The nucleic acid can be both a DNA sequence and an RNA sequence, as long as the protein according to the invention can be o obtained from this nucleic acid upon expression in a suitable system.
In a preferred embodiment of the invention the nucleic acid is a DNA sequence. This DNA sequence in an especially preferred embodiment of the invention comprises a sequence as shown in SEQ.ID.NO.1 and 5 SEQ.ID.NO.3, respectively, or parts thereof. SEQ.ID.NO.1 shows a nucleic acid encoding MP52, wherein the codon for the cysteine responsible for the dimer formation is replaced by another codon which does not encode cysteine or deleted. This substitution or deletion is shown as "nnn" in the sequence protocols. SEQ.ID.NO.3 shows a nucleic acid encoding MP1 21 , o wherein also the codon for the cysteine effecting the dimer formation is replaced by a respective different codon or deleted. Instead of the complete sequences of SEQ.ID.NOs.1 or 3 also parts can be used that encode the mature proteins or fragments also described above.
It is preferred in the framework of the present invention that the nucleic acid apart from the coding sequences also contains expression control sequences. Such expression control sequences are known to the man skilled in the art and serve to control the expression of the encoded protein in a host cell. The host cell does not have to be an isolated cell, moreover, the nucleic acid can be expressed in the patient in vivo in the target tissue. This can be done by inserting the nucleic acid into the cell genome, however, it is also possible to transform host cells with expression vectors containing a nucleic acid according to the invention. Such expression vectors are a further subject matter of the present invention, wherein the nucleic acid is inserted in a suitable vector system, the vector system being selected according to the desired expression of the protein. The vector system can be a eukaryotic vector system, but - in the framework of the present invention - it is preferably a prokaryotic vector system, with which the proteins can be produced in prokaryotic host cells in a particularly easy and pure manner. In addition, the expression vector can be a viral vector.
Also host cells in turn are a further subject matter of the present invention. The host cells are characterized in that they contain a nucleic acid according to the invention or an expression vector according to the invention and that they are able to use the information present in the nucleic acids and in the expression vector, respectively, for the expression of a monomeric protein according to the invention.
Although in the framework of the present invention also eukaryotic host cells are suitable for the production of the protein, it is, as mentioned already several times above, particularly advantageous that the protein according to the invention can be produced in prokaryotic host cells, which therefore represent a preferred embodiment of the present invention. After such preferred expression in prokaryotic host cells the protein is purified and renatured according to known methods, thereby effecting intramolecular cystine bridge formation.
Since, however, not only in vitro production of the monomeric protein is possible, but also in vivo expression of a nucleic acid according to the invention, a further preferred embodiment is a eukaryotic host cell, and especially a eukaryotic host cell containing the DNA in its genome, or as an expression vector. Such host cell can also be useful for application to an individual in need of morphogenic treatment.
Further subject matters of the present application are pharmaceutical compositions comprising at least one monomeric protein according to the invention or at least one nucleic acid encoding for such a protein or at least one corresponding expression vector, or at least one eukaryotic host cell expressing the monomeric protein.
The protein itself, but also a nucleic acid according to the invention, an expression vector or a host cell can be considered to be advantageous as active substances in a pharmaceutical composition. Also combinations of monomeric proteins, with either biological activities in the same or different applications, can be used in preferred pharmaceutical compositions. Especially preferred for neuronal applications are combinations of MP52 with other TGF- ? superfamily proteins, both in monomeric form, like for example with GDNF (see WO 97/031 88) . Also preferred for neuronal applications are combinations of TGF- ? with GDNF, both in monomeric form. Also for applications concerning cartilage and/or bone the combination of several monomeric proteins might be useful, like MP52 with a protein of TGF-£ (see e.g. WO 92/09697) or MP52 with a cartilage maintenance-inducing protein such as BMP-9 (see e.g. WO 96/391 70) . When a nucleic acid or an expression vector is used, however, it has to be ensured that when administering to the patient there has to be an environment in which the nucleic acid and the expression vector, respectively, can be expressed and the protein according to the invention can be produced in vivo at the site of action. The same applies accordingly to the host cell according to the invention. When using expression vectors 5 or host cells it is also possible that they encode more than one monomeric protein of the invention to produce a combination of two or more monomeric proteins.
It is advantageous to both the protein and the nucleic acid or the expression ιo vector or the host cell when they are applied in and/or on a biocompatible matrix. The matrix material can be transplanted into the patient, e.g. surgically, wherein the protein either is effective on the surface of the matrix material or the protein or the DNA encoding the protein can be slowly released from the matrix material and then be effective over a long i s period of time. Additionally it is possible and advantageous to use a biodegradable matrix material in the pharmaceutical composition, wherein this material preferably dissolves during the protein induced tissue formation so that a protein or a nucleic acid contained therein is released and the newly formed tissue replaces the matrix material.
20
Finally, in case of applications relating to bone formation, it is advantageous to use a matrix material which is itself e.g. osteogenically active. By using such a matrix material it becomes possible to achieve a synergistic effect of protein and matrix material and to effect a particularly rapid and effective 25 bone formation.
An especially preferred matrix material that can be used according to the invention is a matrix material as described in U.S. 5,231 , 1 69 and U.S. 5,776, 1 93 and especially for applications like spinal fusion.
30
When using a combination of a matrix material and protein and/or nucleic acid and/or expression vector, it is preferable to sterilize such a combination prior to its use. The matrix and the morphogenetic protein can be separately sterilized and then combined, but it is preferred to terminally sterilize the device consisting of matrix and morphogenetic protein. Terminal sterilization can be achieved by ionizing radation as already described for dimeric proteins (U.S. 5,674,292) but it is also advantageous to use ethylene oxide.
Of course this invention also comprises pharmaceutical compositions containing further substances like e.g. pharmacologically acceptable auxiliary and carrier substances. However, the protein according to the invention, also in case a matrix material is used, does not necessarily have to be used together with this matrix material, but can also be administered systemically, wherein it concentrates preferably in the surrounding of an implanted matrix material.
For some applications the protein according to the invention and the nucleic acid forming this protein, respectively or the expression vector or host cell can preferably be present in an injectable composition. Implants are not necessary or possible for every form of application of the proteins according to the invention. However, it is also possible to provide an implantable vessel or an implantable micropump containing for example semipermeable membranes in which the protein according to the invention or the nucleic acid generating it is contained, from which either one is slowly released over a prolonged period of time. The pharmaceutical composition according to the invention can also contain other vehicles which make it possible that the proteins or the nucleic acids or the expression vectors encoding these proteins be transported to the site of activity and released there, wherein e.g. liposomes or nanospheres can be used. In principle, it is also possible to apply host cells, like e.g. implanted embryonic cells expressing the proteins. Cells transfected with recombinant DNA may be encapusled prior to implantation. Any other practicable but herein not explicitly described form of application of the pharmaceutical composition according the invention and their corresponding manufacture are also comprised by the present invention, as long as they contain a protein according to the invention or a nucleic acid or an expression vector coding therefor, or a host cell expressing it.
Although the indications shall not be restricted herein and all indications exhibiting the dimeric form of the protein according to the invention are also comprised, in the following types of application for the compositions according to the invention are listed which are considered to be particularly preferred indications for the proteins of the present invention. On the one hand, there is the prevention or therapy of diseases associated with bone and/or cartilage damage or affecting bone and/or cartilage disease, or generally situations, in which cartilage and/or bone formation is desirable or for spinal fusion, and on the other hand, there is prevention or therapy of damaged or diseased tissue associated with connective tissue including tendon and/or ligament, periodontal or dental tissue including dental implants, neural tissue including CNS tissue and neuropathological situations, tissue of the sensory system, liver, pancreas, cardiac, blood vessel, renal, uterine and thyroid tissue, skin, mucous membranes, endothelium, epithelium, for promotion or induction of nerve growth, tissue regeneration, angiogenesis, wound healing including ulcers, burns, injuries or skin grafts, induction of proliferation of progenitor cells or bone marrow cells, for maintenance of a state of proliferation or differentiation for treatment or preservation of tissue or cells for organ or tissue transplantation, for integrity of gastrointestinal lining, for treatment of disturbances in fertility, contraception or pregnancy.
Diseases concerning sensory organs like the eye are also to be included in the preferred indication of the pharmaceutical composition according to the invention. As neuronal diseases again Parkinson's and Alzheimer's diseases can be mentioned as examples. The pharmaceutical compositions according to the invention can be used in any desired way, the pharmaceutical compositions are formulated preferably for surgical local application, topical or systemic application. Auxiliary substances for the individual application form can of course be present in the pharmaceutical composition according to the invention. For some applications it can be advantageous to add some further substances to the pharmaceutical composition as for example Vitamin D (WO 92/21 365), parathyroid hormone related peptide (WO 97/35607), chordin (WO 98/ 21 335), anti-fibrinolytic agent (EP 535091 ), anti-metabolites (WO 95/09004), alkyl cellulose (WO 93/00050), mannitol (WO 98/33514), sugar, glycine, glutamic acid hydrochloride (U.S. 5,385,887), antibiotics, antiseptics, amino acids and/or additives which improve the solubility or stablility of the monomeric morphogenetic protein as for example nonionic detergents (e.g. Tween 80), basic amino acids, carrier proteins (e.g. serum albumin), full length propeptides of the TGF-/? superfamily or parts thereof.
As can be already gathered from the description of proteins, nucleic acids and pharmaceutical compositions, the proteins according to the invention and respective nucleic acids, which provide for an expression of the proteins at the site of activity, can advantageously be applied in all areas for which also the dimeric forms of the proteins, as described, can be applied. In the framework of the present invention therefore a further subject matter is the use of a pharmaceutical composition according to the present invention for the treatment or prevention of any indications of the dimeric forms of the proteins according to the invention.
Herein it is again possible to conduct surgical operations and to implant the pharmaceutical composition (in particular contained on a matrix material), an administration in liquid or otherwise suitable form via, e.g. injection or oral administration seems to be as suitable as a topical application for e.g. tissue regeneration. Fig. 1 A shows a two dimensional graph of the conformation of recombinantly produced dimeric MP52 with the deleted first alanine. In this figure the 7 cysteine bridges contained in a dimer are shown, wherein there are 3 intramolecular cystine bridges per monomer unit and 1 intermolecular cystine brigde connecting both monomers. Fig. 1 B shows the monomeric protein according to the invention wherein the cysteine of the amino acid sequence of MP52 has been replaced by X that denotes any amino acid except cysteine.
Examples
The examples shall explain the invention more illustratively and are not considered to be restrictive.
Expression of monomeric MP52 in E. coli, refolding , purification and possible test systems to determine the biological activity
The mature part of human MP52 was mutated by converting Cysteine to Alanine at position 465 of SEQ ID NO 2. For this purpose the nucleotides at the position 2032 and 2033 of SEQ ID NO 1 were converted from TG to GC. The substitution of the nucleotides was performed by using the prokaryotic plasmid pBP2MP52m and a PCR method.
The vector pBP2MP52m is a derivative of the pBR322 plasmid containing an ampicillin resistance gene, a T7-promoter followed by a ribosomal binding site, a start codon, the mature part of MP52 (coding for the amino acids 382-501 in SEQ ID NO. 2 with a Cysteine at position 465), stop codons in each reading frame and a terminator. The plasmid was deposited at the DSM (DSM 1 0029, 2nd June 1 995) . The mutation was performed by using the QuickChange™ Site-Directed Mutagenesis Kit with the PfuTurbo™ DNA polymerase and the Dpn I endonuclease from Stratagene (Catalog #20051 8) according to the instruction manual of the manufacturer. The oligonucleotide CCACACCACCCACCGCCTGTGTGCCCACGC (SEQ ID NO. 5) and the oligonucleotide GCGTGGGCACACAGGCGGTGGGTGGTGTGG (SEQ ID NO. 6) were purified by polyacrylamide gel electrophoresis and used as the mutagenic primers. The resulting plasmid pBP2MP52ALA contained after the start codon the nucleotide sequence coding for the amino acids 382-501 in SEQ ID NO. 2 with an Alanine at position 465 which was verified by sequencing.
The expression of monomeric MP52 can be induced by providing a source of T7 RNA polymerase. Using the bacterial strain BL21 (DE3)pLysS (Novagen) transformed with the plasmid pBP2MP52ALA and inducing the T7 RNA polymerase gene according to the manufacturers instructions with IPTG, monomeric MP52 can be expressed in inclusion bodies which can be isolated according to standard procedures. Further purification was done on a reversed phase column (Nucleosil 300-7C4, Machery-Nagel) with a 0 to 50% buffer B gradient (buffer A: 0.1 % TFA in water, buffer B: 90% acetonitrile, 0.1 % TFA) in 50 minutes (flow rate: 2 ml/min) . The fractions containing monomeric MP52 were pooled, lyophilized and stored at -70°C. MP52 was solubilized in a denaturing buffer (6M Urea, 500 mM NaCI, 1 0 mM DTT, 1 mM EDTA , 20 mM Tris pH 8.3) and added for refolding in 9 times of a 50 mM Glycine-buffer system (pH 9.8) containing CHAPS (20 mM), NaCI (500 mM) and 3 mM GSSG and gently stirred at 4°C. After approximately 24 hours the sample was diluted 2.8 times with 14 mM NaH2P04 and subjected to isoelectric precipitation. After centrifugation the precipitate was dissolved in 0.1 % TFA and the folded monomer was further purified by reversed phase HPLC. For this purpose MP52 was loaded on a column (Aquapore Octyl 20 micron, Applied Biosystems) equilibrated with 25% buffer B (buffer A: 0.1 % TFA in water, buffer B: 90% acetonitrile, 0.1 % TFA) . Monomeric MP52 was eluted with a 25-60% buffer B gradient in 70 minutes (flow rate 3 ml/min). Fractions containing purified refolded monomeric MP52 were pooled, lyophilized, stored at -70°C and can be used in biological activity studies. Useful for biological activity studies of monomeric MP52 in the field of cartilage and bone induction are for example the measurement of increasing ALP activity (Takuwa et al.. Am. J. Physiol. 257, E797-E803, 1 989) using osteoprogenitor-like ROB-C26 cells (Yamaguchi et al., Calcif. Tissue Int. 49, 221 -225, 1 991 ) as described in WO95/0481 9 or ATDC5 cells (Riken Gene Bank, RCB 0565, embryonic cells which differentiate like cartilage cells) . Useful activity tests showing the neurological capacities of refolded monomeric MP52 are the measurement of increased survival of dopaminergic neurons as described for example by Krieglstein et al. (J. Neuroscience Res. 42, 724-732, 1 995) or Sullivan et al. (Neuroscience Letters 233, 73-76, 1 997) or the outgrowth of nerve fibers from embryonic retina are described for example in the WO 97/031 88. The angiogenic potential of folded monomeric MP52 can be verified for example in an in vivo corneal micropocket model. Briefly, Hydron can be used as a slow release pellet adapted from D 'Amato et al (Proc. Natl. Acad. Sci. USA 91 ( 1 994) 4082-4085). About 2 μg of monomeric MP52 can be dissolved in 20 /I of 50% acetonitrile, stabilized with 5 mg sucralfate (sucrose aluminum sulfate; Bukh Meditec, Copenhagen) and mixed with 20 μl of 1 2% (wt/vol) Hydron NCC (Interferon Science, New Brunswick, NJ) in ethanol. The mixture can be pipetted onto Teflon pegs and dried to produce a pellet. Subsequently the pellet can be implanted into corneal micropockets of the eye of a male New Zealand White rabbit. For this purpose an intrastromal tunnel, starting from a perpendicular linear incision in the pupillary plane and ending 2.75 mm prior to the limbus can be created. As a postsurgical care one single dose of erythromycin ointment should be given onto the surface of the cornea. About 1 0 days after implantation new capillaries which grow toward the implantation site should be seen. The outgrowth towards the pellet can reflect the chemotactic response of the endothelial cells to the released MP52 and can be quantified by measuring the vascularized area and the number of vessels at the limbus . Monomeric MP52 isolated and purified from inclusion bodies but not subjected to the refolding process can be used as a negative control. Dimeric MP52 can be used as the positive control.
Expression of monomeric MP121 in E.coli, refolding, purification and possible test systems to determine the biological activity
The mature part of human MP121 was mutated by converting Cysteine to Alanine at position 316 of SEQ ID NO 4. For this purpose the nucleotides at position 1073 and 1074 of SEQ ID NO. 3 were converted from TG to GC. The substitution of the nucleotides was performed essentially as described for MP52 in the above example with differences in the plasmid and the mutagenic primers. The pBP4MP121m plasmid was used which differs from the pBP2MP52m plasmid by containing the mature part of MP121 (coding for the amino acids 237-352 in SEQ ID NO. 4 with a Cysteine at position 316) instead of the mature part of MP52 and by harboring a tetracycline resistance gene instead of the ampicillin resistance gene. As mutagenic primers the oligonucleotide CTGGAGGGGGCTCAGCCTGTGTACCCACGG (SEQ ID NO. 7) and the oligonucleotide CCGTGGGTACACAGGCTGAGCCCCCTCCAG (SEQ ID NO. 8) were used.
The resulting plasmid pBP4MP121ALA contained after the start codon the nucleotide sequence coding for the amino acids 237-352 in SEQ ID NO.4 with an Alanine at position 316 which was verified by sequencing.
The expression of monomeric MP121, isolation of inclusion bodies and purification was performed essentially as described for MP52 in the above example, with the exception that another E.coli strain, the HMS 174 (DE3) (Novagen), was used. For biological activity studies of refolded monomeric MP1 21 showing the neurological capacities the same assays as mentioned for MP52 can be used. The influence of refolded monomeric MP1 21 on liver growth can be investigated for example on rat hepatocytes in primary cultures by inhibiting EGF induced DNA synthesis. Briefly, hepatocytes can be isolated from rat (Wistar) liver and cultured according to Yasuda et al. (J. Clin. Invest. Vol. 92, 1 491 -1496 ( 1 993)). The cells have to be washed prior to incubation with fresh serum-free medium containing 0. 1 nM insulin. 0. 1 % BSA and 1 nM EGF. The solubilized refolded monomeric MP1 21 can be added to the medium at various concentrations and subsequently the hepatocytes have to be incubated for 72h including 0.5 μCi [3H]Thymidine/ml for the last 24 hours as described by Mead & Fausto (Proc. Natl. Acad. Sci. USA 86, 1 558- 1 5562 ( 1 989)). [3H]Thymidine incorporation into trichloracetic acid- precitable material can be measured as described by McNiel et al. (J. Cell Biol. 1 01 , 372-379 ( 1 985)).
Stimulation of hematopoiesis can be determined for examples on bone marrow aspirate cultures as described in example 8 of W098/22492.
SEQUENCE LISTING
<110> HyGene AG
<120> Monomeric Protein of the TGF-beta Family
<130> 20780pwomd
<140> <141>
<150> EP99115613 <151> 1999-08-06
<160> 8
<170> Patentln Ver. 2.1
<210> 1
<211> 2703
<212> DNA
<213> Homo sapiens
<220>
<221> CDS
<222> (S40) .. (2142)
<400> 1 ccatggcctc gaaagggcag cggtgatttt tttcacataa atatatcgca cttaaatgag 60
tttagacagc atgacatcag agagtaatta aattggtttg ggttggaatt ccgtttccaa 120
ttcctgagtt caggtttgta aaagattttt ctgagcacct gcaggcctgt gagtgtgtgt 180
gtgtgtgtgt gtgtgtgtgt gtgtgtgtga agtattttca ctggaaagga ttcaaaacta 240
gggggaaaaa aaaactggag cacacaggca gcattacgcc attcttcctt cttggaaaaa 300 tccctcagcc ttatacaagc ctccttcaag ccctcagtca gttgtgcagg agaaaggggg 360
cggttggctt tctcctttca agaacgagtt attttcagct gctgactgga gacggtgcac 420
gtctggatac gagagcattt ccactatggg actggataca aacacacacc cggcagactt 480
caagagtctc agactgagga gaaagccttt ccttctgctg ctactgctgc tgccgctgct 540
tttgaaagtc cactcctttc atggtttttc ctgccaaacc agaggcacct ttgctgctgc 600
cgctgttctc tttggtgtca ttcagcggct ggccagagg atg aga etc ccc aaa 654
Met Arg Leu Pro Lys 1 5
etc etc act ttc ttg ctt tgg tac ctg get tgg ctg gac ctg gaa ttc 702 Leu Leu Thr Phe Leu Leu Trp Tyr Leu Ala Trp Leu Asp Leu Glu Phe 10 15 20
ate tgc act gtg ttg ggt gcc cct gac ttg ggc cag aga ccc cag ggg 750 He Cys Thr Val Leu Gly Ala Pro Asp Leu Gly Gin Arg Pro Gin Gly
25 30 35
ace agg cca gga ttg gcc aaa gca gag gcc aag gag agg ccc ccc ctg 798 Thr Arg Pro Gly Leu Ala Lys Ala Glu Ala Lys Glu Arg Pro Pro Leu 40 45 50
gcc egg aac gtc ttc agg cca ggg ggt cac age tat ggt ggg ggg gcc 846 Ala Arg Asn Val Phe Arg Pro Gly Gly His Ser Tyr Gly Gly Gly Ala 55 60 65
ace aat gcc aat gcc agg gca aag gga ggc ace ggg cag aca gga ggc 894 Thr Asn Ala Asn Ala Arg Ala Lys Gly Gly Thr Gly Gin Thr Gly Gly 70 75 80 85
ctg aca cag ccc aag aag gat gaa ccc aaa aag ctg ccc ccc aga ccg 942 Leu Thr Gin Pro Lys Lys Asp Glu Pro Lys Lys Leu Pro Pro Arg Pro 90 95 100 ggc ggc cct gaa ccc aag cca gga cac cct ccc caa aca agg cag get 990 Gly Gly Pro Glu Pro Lys Pro Gly His Pro Pro Gin Thr Arg Gin Ala 105 110 115
aca gcc egg act gtg ace cca aaa gga cag ctt ccc gga ggc aag gca 1038 Thr Ala Arg Thr Val Thr Pro Lys Gly Gin Leu Pro Gly Gly Lys Ala 120 125 130
ccc cca aaa gca gga tct gtc ccc age tec ttc ctg ctg aag aag gcc 1086 Pro Pro Lys Ala Gly Ser Val Pro Ser Ser Phe Leu Leu Lys Lys Ala 135 140 145
agg gag ccc ggg ccc cca cga gag ccc aag gag ccg ttt cgc cca ccc 1134 Arg Glu Pro Gly Pro Pro Arg Glu Pro Lys Glu Pro Phe Arg Pro Pro 150 155 160 165
ccc ate aca ccc cac gag tac atg etc teg ctg tac agg acg ctg tec 1182 Pro He Thr Pro His Glu Tyr Met Leu Ser Leu Tyr Arg Thr Leu Ser 170 175 180
gat get gac aga aag gga ggc aac age age gtg aag ttg gag get ggc 1230 Asp Ala Asp Arg Lys Gly Gly Asn Ser Ser Val Lys Leu Glu Ala Gly 185 190 195
ctg gcc aac ace ate ace age ttt att gac aaa ggg caa gat gac cga 1278 Leu Ala Asn Thr He Thr Ser Phe He Asp Lys Gly Gin Asp Asp Arg 200 205 210
ggt ccc gtg gtc agg aag cag agg tac gtg ttt gac att agt gcc ctg 1326 Gly Pro Val Val Arg Lys Gin Arg Tyr Val Phe Asp He Ser Ala Leu 215 220 225
gag aag gat ggg ctg ctg ggg gcc gag ctg egg ate ttg egg aag aag 1374 Glu Lys Asp Gly Leu Leu Gly Ala Glu Leu Arg He Leu Arg Lys Lys 230 235 240 245
ccc teg gac acg gcc aag cca gcg gcc ccc gga ggc ggg egg get gcc 1422 Pro Ser Asp Thr Ala Lys Pro Ala Ala Pro Gly Gly Gly Arg Ala Ala 250 255 260
cag ctg aag ctg tec age tgc ccc age ggc egg cag ccg gcc tec ttg 1470 Gin Leu Lys Leu Ser Ser Cys Pro Ser Gly Arg Gin Pro Ala Ser Leu 265 270 275 ctg gat gtg cgc tec gtg cca ggc ctg gac gga tct ggc tgg gag gtg 1518 Leu Asp Val Arg Ser Val Pro Gly Leu Asp Gly Ser Gly Trp Glu Val 280 285 290
ttc gac ate tgg aag etc ttc cga aac ttt aag aac teg gcc cag ctg 1566 Phe Asp He Trp Lys Leu Phe Arg Asn Phe Lys Asn Ser Ala Gin Leu 295 300 305
tgc ctg gag ctg gag gcc tgg gaa egg ggc agg gcc gtg gac etc cgt 1614 Cys Leu Glu Leu Glu Ala Trp Glu Arg Gly Arg Ala Val Asp Leu Arg 310 315 320 325
ggc ctg ggc ttc gac cgc gcc gcc egg cag gtc cac gag aag gcc ctg 1662 Gly Leu Gly Phe Asp Arg Ala Ala Arg Gin Val His Glu Lys Ala Leu 330 335 340
ttc ctg gtg ttt ggc cgc ace aag aaa egg gac ctg ttc ttt aat gag 1710 Phe Leu Val Phe Gly Arg Thr Lys Lys Arg Asp Leu Phe Phe Asn Glu 345 350 355
att aag gcc cgc tct ggc cag gac gat aag ace gtg tat gag tac ctg 1758 He Lys Ala Arg Ser Gly Gin Asp Asp Lys Thr Val Tyr Glu Tyr Leu 360 365 370
ttc age cag egg cga aaa egg egg gcc cca ctg gcc act cgc cag ggc 1806 Phe Ser Gin Arg Arg Lys Arg Arg Ala Pro Leu Ala Thr Arg Gin Gly 375 380 385
aag cga ccc age aag aac ctt aag get cgc tgc agt egg aag gca ctg 1854 Lys Arg Pro Ser Lys Asn Leu Lys Ala Arg Cys Ser Arg Lys Ala Leu 390 395 400 405
cat gtc aac ttc aag gac atg ggc tgg gac gac tgg ate ate gca ccc 1902 His Val Asn Phe Lys Asp Met Gly Trp Asp Asp Trp He He Ala Pro 410 415 420
ctt gag tac gag get ttc cac tgc gag ggg ctg tgc gag ttc cca ttg 1950 Leu Glu Tyr Glu Ala Phe His Cys Glu Gly Leu Cys Glu Phe Pro Leu 425 430 435
cgc tec cac ctg gag ccc acg aat cat gca gtc ate cag ace ctg atg 1998 Arg Ser His Leu Glu Pro Thr Asn His Ala Val He Gin Thr Leu Met 440 445 450 aac tec atg gac ccc gag tec aca cca ccc ace nnn tgt gtg ccc acg 2046 Asn Ser Met Asp Pro Glu Ser Thr Pro Pro Thr Xaa Cys Val Pro Thr 455 460 465
egg ctg agt ccc ate age ate etc ttc att gac tct gcc aac aac gtg 2094 Arg Leu Ser Pro He Ser He Leu Phe He Asp Ser Ala Asn Asn Val 470 475 480 485
gtg tat aag cag tat gag gac atg gtc gtg gag teg tgt ggc tgc agg 2142 Val Tyr Lys Gin Tyr Glu Asp Met Val Val Glu Ser Cys Gly Cys Arg
490 495 500
tagcagcact ggecctctgt cttectgggt ggcacatccc aagagcccct tcctgcactc 2202
ctggaatcac agaggggtca ggaagctgtg gcaggagcat ctacacagct tgggtgaaag 2262
gggattccaa taagcttgct cgctctctga gtgtgacttg ggctaaaggc ccccttttat 2322
ccacaagttc ccctggctga ggattgctgc ccgtctgctg atgtgaccag tggcaggcac 2382
aggtccaggg agacagactc tgaatgggac tgagtcccag gaaacagtgc tttccgatga 2442
gactcagccc accatttcte etcacctggg ecttetcage ctetggactc tcetaagcac 2502
ctctcaggag agccacaggt gccactgcct cctcaaatca catttgtgcc tggtgacttc 2562
ctgtccctgg gacagttgag aagctgactg ggcaagagtg ggagagaaga ggagagggct 2622
tggatagagt tgaggagtgt gaggctgtta gactgttaga tttaaatgta tattgatgag 2682
ataaaaagca aaactgtgcc t 2703
<210> 2 <211> 501 <212> PRT <213> Homo sapiens
<400> 2 Met Arg Leu Pro Lys Leu Leu Thr Phe Leu Leu Trp Tyr Leu Ala Trp 1 5 10 15
Leu Asp Leu Glu Phe He Cys Thr Val Leu Gly Ala Pro Asp Leu Gly 20 25 30 Gln Arg Pro Gin Gly Thr Arg Pro Gly Leu Ala Lys Ala Glu Ala Lys 35 40 45
Glu Arg Pro Pro Leu Ala Arg Asn Val Phe Arg Pro Gly Gly His Ser 50 55 60
Tyr Gly Gly Gly Ala Thr Asn Ala Asn Ala Arg Ala Lys Gly Gly Thr 65 70 75 80
Gly Gin Thr Gly Gly Leu Thr Gin Pro Lys Lys Asp Glu Pro Lys Lys
85 90 95
Leu Pro Pro Arg Pro Gly Gly Pro Glu Pro Lys Pro Gly His Pro Pro 100 105 110
Gin Thr Arg Gin Ala Thr Ala Arg Thr Val Thr Pro Lys Gly Gin Leu 115 120 125
Pro Gly Gly Lys Ala Pro Pro Lys Ala Gly Ser Val Pro Ser Ser Phe 130 135 140
Leu Leu Lys Lys Ala Arg Glu Pro Gly Pro Pro Arg Glu Pro Lys Glu 145 150 155 160
Pro Phe Arg Pro Pro Pro He Thr Pro His Glu Tyr Met Leu Ser Leu
165 170 175
Tyr Arg Thr Leu Ser Asp Ala Asp Arg Lys Gly Gly Asn Ser Ser Val 180 185 190
Lys Leu Glu Ala Gly Leu Ala Asn Thr He Thr Ser Phe He Asp Lys 195 200 205
Gly Gin Asp Asp Arg Gly Pro Val Val Arg Lys Gin Arg Tyr Val Phe 210 215 220
Asp He Ser Ala Leu Glu Lys Asp Gly Leu Leu Gly Ala Glu Leu Arg 225 230 235 240
He Leu Arg Lys Lys Pro Ser Asp Thr Ala Lys Pro Ala Ala Pro Gly
245 250 255
Gly Gly Arg Ala Ala Gin Leu Lys Leu Ser Ser Cys Pro Ser Gly Arg 260 265 270 Gin Pro Ala Ser Leu Leu Asp Val Arg Ser Val Pro Gly Leu Asp Gly 275 280 285
Ser Gly Trp Glu Val Phe Asp He Trp Lys Leu Phe Arg Asn Phe Lys 290 295 300
Asn Ser Ala Gin Leu Cys Leu Glu Leu Glu Ala Trp Glu Arg Gly Arg 305 310 315 320
Ala Val Asp Leu Arg Gly Leu Gly Phe Asp Arg Ala Ala Arg Gin Val
325 330 335
His Glu Lys Ala Leu Phe Leu Val Phe Gly Arg Thr Lys Lys Arg Asp 340 345 350
Leu Phe Phe Asn Glu He Lys Ala Arg Ser Gly Gin Asp Asp Lys Thr 355 360 365
Val Tyr Glu Tyr Leu Phe Ser Gin Arg Arg Lys Arg Arg Ala Pro Leu 370 375 380
Ala Thr Arg Gin Gly Lys Arg Pro Ser Lys Asn Leu Lys Ala Arg Cys 385 390 395 400
Ser Arg Lys Ala Leu His Val Asn Phe Lys Asp Met Gly Trp Asp Asp
405 410 415
Trp He He Ala Pro Leu Glu Tyr Glu Ala Phe His Cys Glu Gly Leu 420 425 430
Cys Glu Phe Pro Leu Arg Ser His Leu Glu Pro Thr Asn His Ala Val 435 440 445
He Gin Thr Leu Met Asn Ser Met Asp Pro Glu Ser Thr Pro Pro Thr 450 455 460
Xaa Cys Val Pro Thr Arg Leu Ser Pro He Ser He Leu Phe He Asp 465 470 475 480
Ser Ala Asn Asn Val Val Tyr Lys Gin Tyr Glu Asp Met Val Val Glu
485 490 495
Ser Cys Gly Cys Arg 500 <210> 3 <211> 2272 <212> DNA <213> Homo sapiens
<220> <221> CDS
<222> (128) .. (1183)
<400> 3 caaggagcca tgccagctgg acacacactt cttccagggc ctctggcagc caggacagag 60
ttgagaeeac agctgttgag accctgagcc etgagtctgt attgctcaag aagggccttc 120
cccagca atg ace tec tea ttg ctt ctg gcc ttt etc etc ctg get cca 169 Met Thr Ser Ser Leu Leu Leu Ala Phe Leu Leu Leu Ala Pro 1 5 10
ace aca gtg gcc act ccc aga get ggc ggt cag tgt cca gca tgt ggg 217 Thr Thr Val Ala Thr Pro Arg Ala Gly Gly Gin Cys Pro Ala Cys Gly 15 20 25 30
ggg ccc ace ttg gaa ctg gag age cag egg gag ctg ctt ctt gat ctg 265 Gly Pro Thr Leu Glu Leu Glu Ser Gin Arg Glu Leu Leu Leu Asp Leu
35 40 45
gcc aag aga age ate ttg gac aag ctg cac etc ace cag cgc cca aca 313 Ala Lys Arg Ser He Leu Asp Lys Leu His Leu Thr Gin Arg Pro Thr 50 55 60
ctg aac cgc cct gtg tec aga get get ttg agg act gca ctg cag cac 361 Leu Asn Arg Pro Val Ser Arg Ala Ala Leu Arg Thr Ala Leu Gin His 65 70 75
etc cac ggg gtc cca cag ggg gca ctt eta gag gac aac agg gaa cag 409 Leu His Gly Val Pro Gin Gly Ala Leu Leu Glu Asp Asn Arg Glu Gin 80 85 90
gaa tgt gaa ate ate age ttt get gag aca ggc etc tec ace ate aac 457 Glu Cys Glu He He Ser Phe Ala Glu Thr Gly Leu Ser Thr He Asn 95 100 105 110 cag act cgt ctt gat ttt cac ttc tec tct gat aga act get ggt gac 505 Gin Thr Arg Leu Asp Phe His Phe Ser Ser Asp Arg Thr Ala Gly Asp 115 120 125
agg gag gtc cag cag gcc agt etc atg ttc ttt gtg cag etc cct tec 553 Arg Glu Val Gin Gin Ala Ser Leu Met Phe Phe Val Gin Leu Pro Ser 130 135 140
aat ace act tgg ace ttg aaa gtg aga gtc ctt gtg ctg ggt cca cat 601 Asn Thr Thr Trp Thr Leu Lys Val Arg Val Leu Val Leu Gly Pro His 145 150 155
aat ace aac etc ace ttg get act cag tac ctg ctg gag gtg gat gcc 649 Asn Thr Asn Leu Thr Leu Ala Thr Gin Tyr Leu Leu Glu Val Asp Ala 160 165 170
agt ggc tgg cat caa etc ccc eta ggg cct gaa get caa get gcc tgc 697 Ser Gly Trp His Gin Leu Pro Leu Gly Pro Glu Ala Gin Ala Ala Cys 175 180 185 190
age cag ggg cac ctg ace ctg gag ctg gta ctt gaa ggc cag gta gcc 745 Ser Gin Gly His Leu Thr Leu Glu Leu Val Leu Glu Gly Gin Val Ala 195 200 205
cag age tea gtc ate ctg ggt gga get gcc cat agg cct ttt gtg gca 793 Gin Ser Ser Val He Leu Gly Gly Ala Ala His Arg Pro Phe Val Ala 210 215 220
gcc egg gtg aga gtt ggg ggc aaa cac cag att cac cga cga ggc ate 841 Ala Arg Val Arg Val Gly Gly Lys His Gin He His Arg Arg Gly He 225 230 235
gac tgc caa gga ggg tec agg atg tgc tgt cga caa gag ttt ttt gtg 889 Asp Cys Gin Gly Gly Ser Arg Met Cys Cys Arg Gin Glu Phe Phe Val 240 245 250
gac ttc cgt gag att ggc tgg cac gac tgg ate ate cag cct gag ggc 937 Asp Phe Arg Glu He Gly Trp His Asp Trp He He Gin Pro Glu Gly 255 260 265 270
tac gcc atg aac ttc tgc ata ggg cag tgc cca eta cac ata gca ggc 985 Tyr Ala Met Asn Phe Cys He Gly Gin Cys Pro Leu His He Ala Gly 275 280 285 atg cct ggt att get gcc tec ttt cac act gca gtg etc aat ctt etc 1033 Met Pro Gly He Ala Ala Ser Phe His Thr Ala Val Leu Asn Leu Leu 290 295 300
aag gcc aac aca get gca ggc ace act gga ggg ggc tea nnn tgt gta 1081 Lys Ala Asn Thr Ala Ala Gly Thr Thr Gly Gly Gly Ser Xaa Cys Val 305 310 315
ccc acg gcc egg cgc ccc ctg tct ctg etc tat tat gac agg gac age 1129 Pro Thr Ala Arg Arg Pro Leu Ser Leu Leu Tyr Tyr Asp Arg Asp Ser 320 325 330
aac att gtc aag act gac ata cct gac atg gta gta gag gcc tgt ggg 1177 Asn He Val Lys Thr Asp He Pro Asp Met Val Val Glu Ala Cys Gly 335 340 345 350
tgc agt tagtctatgt gtggtatggg cagcccaagg ttgcatggga aaacacgccc 1233 Cys Ser
ctacagaagt gcacttcctt gagaggaggg aatgacctca ttctctgtcc agaatgtgga 1293
ctccctcttc ctgagcatct tatggaaatt accccacctt tgacttgaag aaaccttcat 1353
ctaaagcaag tcactgtgcc atcttcctga ccactaccct ctttcctagg gcatagtcca 1413
tcccgctagt ccatcccgct agccccactc cagggactca gacccatctc caaccatgag 1473
caatgccatc tggttcccag gcaaagacac ccttagctca cctttaatag accccataac 1533
ccactatgcc ttcctgtcct ttctactcaa tggtccccac tccaagatga gttgacacaa 1593
ccccttcccc caatttttgt ggatctccag agaggccctt ctttggattc accaaagttt 1653
agatcactgc tgcccaaaat agaggcttac ctacccccct ctttgttgtg agcccctgtc 1713
cttcttagtt gtccaggtga actactaaag ctctctttgc ataccttcat ccattttttg 1773
tccttetetg cettteteta tgcccttaag gggtgaettg cctgagctet atcacctgag 1833
ctcccctgcc ctctggcttc ctgctgaggt cagggcattt cttatccctg ttccctctct 1893
gtctaggtgt eatggttetg tgtaactgtg gctattctgt gtecctaeae taectggcta 1953
cececttcca tggccceagc tctgcctaca ttctgatttt tttttttttt ttttttttga 2013 aaagttaaaa attecttaat tttttattec tggtaceact aceacaattt acagggeaat 2073
atacctgatg taatgaaaag aaaaagaaaa agacaaagct acaacagata aaagacctca 2133
ggaatgtaca tetaattgae actacattgc attaateaat agctgeaett tttgeaaaet 2193
gtggctatga cagteetgaa caagaagggt ttcetgttta agetgcagta acttttctga 2253
ctatggatca tcgttcctt 2272
<210> 4 <211> 352 <212> PRT <213> Homo sapiens
<400> 4
Met Thr Ser Ser Leu Leu Leu Ala Phe Leu Leu Leu Ala Pro Thr Thr 1 5 10 15
Val Ala Thr Pro Arg Ala Gly Gly Gin Cys Pro Ala Cys Gly Gly Pro 20 25 30
Thr Leu Glu Leu Glu Ser Gin Arg Glu Leu Leu Leu Asp Leu Ala Lys 35 40 45
Arg Ser He Leu Asp Lys Leu His Leu Thr Gin Arg Pro Thr Leu Asn 50 55 60
Arg Pro Val Ser Arg Ala Ala Leu Arg Thr Ala Leu Gin His Leu His 65 70 75 80
Gly Val Pro Gin Gly Ala Leu Leu Glu Asp Asn Arg Glu Gin Glu Cys 85 90 95
Glu He He Ser Phe Ala Glu Thr Gly Leu Ser Thr He Asn Gin Thr 100 105 110
Arg Leu Asp Phe His Phe Ser Ser Asp Arg Thr Ala Gly Asp Arg Glu 115 120 125
Val Gin Gin Ala Ser Leu Met Phe Phe Val Gin Leu Pro Ser Asn Thr 130 135 140 Thr Trp Thr Leu Lys Val Arg Val Leu Val Leu Gly Pro His Asn Thr 145 150 155 160
Asn Leu Thr Leu Ala Thr Gin Tyr Leu Leu Glu Val Asp Ala Ser Gly 165 170 175
Trp His Gin Leu Pro Leu Gly Pro Glu Ala Gin Ala Ala Cys Ser Gin 180 185 190
Gly His Leu Thr Leu Glu Leu Val Leu Glu Gly Gin Val Ala Gin Ser 195 200 205
Ser Val He Leu Gly Gly Ala Ala His Arg Pro Phe Val Ala Ala Arg 210 215 220
Val Arg Val Gly Gly Lys His Gin He His Arg Arg Gly He Asp Cys 225 230 235 240
Gin Gly Gly Ser Arg Met Cys Cys Arg Gin Glu Phe Phe Val Asp Phe 245 250 255
Arg Glu He Gly Trp His Asp Trp He He Gin Pro Glu Gly Tyr Ala 260 265 270
Met Asn Phe Cys He Gly Gin Cys Pro Leu His He Ala Gly Met Pro 275 280 285
Gly He Ala Ala Ser Phe His Thr Ala Val Leu Asn Leu Leu Lys Ala 290 295 300
Asn Thr Ala Ala Gly Thr Thr Gly Gly Gly Ser Xaa Cys Val Pro Thr 305 310 315 320
Ala Arg Arg Pro Leu Ser Leu Leu Tyr Tyr Asp Arg Asp Ser Asn He 325 330 335
Val Lys Thr Asp He Pro Asp Met Val Val Glu Ala Cys Gly Cys Ser 340 345 350
<210> 5 <211> 30 <212> DNA <213> Artificial Sequence <220 >
<223> Description of Artificial Sequence: mutagenic primer
<400> 5 ccacaccacc caccgcctgt gtgcccacgc 30
<210> 6 <211> 30 <212> DNA <213> Artificial Sequence
<220>
<223> Description of Artificial Sequence: mutagenic primer
<400> 6 gcgtgggcac acaggcggtg ggtggtgtgg 30
<210> 7 <211> 30 <212> DNA <213> Artificial Sequence
<220> <223> Description of Artificial Sequence: mutagenic primer
<400> 7 ctggaggggg ctcagcctgt gtacccacgg 30
<210> 8 <211> 30 <212> DNA
<213> Artificial Sequence
<220>
<223> Description of Artificial Sequence: mutagenic primer <400> 8 ccgtgggtae acaggctgag ccecctecag 30

Claims

Claims
1 . Protein selected from the members of the TGF-β superfamily, characterized in that the protein is necessarily monomeric due to substitution or deletion of a cysteine which is responsible for dimer formation.
2. Protein according to claim 1 , characterized in that the protein is a mature protein or a biologically active part or variant thereof.
3. Protein according to any one of the preceeding claims, characterized in that the protein contains at least the 7 cysteine region characteristic for the TGF-β protein superfamily.
4. Protein according to claim 3, characterized in that it contains a consensus sequence according to Formula I: C(Y)25.29CYYYC(Y)25.35XC(Y)27.34CYC or Formula II: C(Y)28CYYYC(Y)30.32XC(Y)31CYC, wherein C denotes cysteine, Y denotes any amino acid and X denotes any amino acid except cysteine.
5. Protein according to any one of claims 1 to 4, characterized in that the protein is a morphogenetic protein.
6. Protein according to any one of the preceeding claims, characterized in that the proteins belongs to the TGF- ?, BMP, GDF, activin or GDNF family.
7. Protein according to claim 6, characterized in that the protein is MP52 (GDF5) or a biologically active part or variant thereof.
8. Protein according to any one of the preceeding claims, characterized in that it comprises the amino acid sequence according to SEQ. ID. NO.2 or a part thereof.
9. Protein according to claim 6, characterized in that the protein is MP1 21 or a biologically active part or variant thereof.
10. Protein according to claim 9, characterized in that it comprises the amino acid sequence according to SEQ. ID. NO.4 or a part thereof.
1 1 . Protein according to any one of claims 1 to 10, characterized in that the cysteine residue is substituted by an amino acid selected from the group of alanine, serine, threonine, leucine, isoleucine, glycine and valine.
1 2. Protein according to any one of claims 1 to 1 1 , characterized in that it contains additional amino acids that facilitate or mediate the transfer and localization of the protein in a certain tissue.
1 3. Nucleic acid, characterized in that it encodes a protein according to any one of claims 1 to 1 2.
1 4. Nucleic acid according to claim 1 3, characterized in that it is a DNA.
1 5. Nucleic acid according to claim 1 3 or 1 4, characterized in that it contains a sequence as shown in SEQ.ID.NO.1 or a fragment thereof.
1 6. Nucleic acid according to claim 1 3 or 14, characterized in that it contains a sequence as shown in SEQ.ID.NO.3 or a fragment thereof.
1 7. Nucleic acid according to any one of claims 1 3 to 1 6, characterized in that it further contains suitable expression control sequences facilitating and/or driving expression of the encoded protein.
1 8. Expression vector, characterized in that it contains a nucleic acid according to any one of claims 1 3 to 1 7 in a suitable vector system.
1 9. Expression vector according to claim 1 8, characterized in that the vector system is suitable for prokaryotic expression.
20. Host cell, characterized in that it contains a nucleic acid according to any one of claims 1 3 to 1 7 or an expression vector according to claims 1 8 or
1 9 and upon expression of said nucleic acid or vector is able to produce a monomeric protein according to any one of claims 1 to 1 2.
21 . Host cell according to claim 20, characterized in that it is a prokaryotic host cell.
22. Host cell according to claim 20, characterized in that it is an embryonal cell.
23. Pharmaceutical composition, characterized in that it contains at least one protein according to any one of claims 1 to 1 2 or at least one nucleic acid according to any one of claims 1 3 to 1 7, at least one expression vector according to any one of claims 1 8 or 1 9 or at least one host cell according to claim 20 or 22.
24. Pharmaceutical composition according to claim 23, characterized in that the protein and/or nucleic acid are contained in and/or on a biocompatible matrix material.
25. Pharmaceutical composition according to claim 24, characterized in that the matrix material is biodegradable.
26. Pharmaceutical composition according to claims 24 or 25, characterized in that the matrix material is itself osteogenically active.
27. Pharmaceutical compostion according to any one of claims 23 to 26, for the prevention or therapy of diseases for which also the dimeric form of the protein would be indicated.
28. Pharmaceutical composition according to claim 27, for prevention or therapy of diseases associated with bone and/or cartilage damage or affecting bone and/or cartilage disease or situations in which cartilage and/or bone growth is desirable or for spinal fusion.
29. Pharmaceutical composition according to claim 27, for prevention or therapy of damaged or diseased tissue associated with connective tissue including tendon and/or ligament, periodontal or dental tissue including dental implants, neural tissue including CNS tissue and neuropathological situations, tissue of the sensory system, liver, pancreas, cardiac, blood vessel, renal, uterine and thyroid tissue, skin, mucous membranes, endothelium, epithelium, for promotion or induction of nerve growth, tissue regeneration, angiogenesis, wound healing including ulcers, burns, injuries or skin grafts, induction of proliferation of progenitor cells or bone marrow cells, for maintenance of a state of proliferation or differentiation, for treatment or preservation of tissue or cells for organ or tissue transplantation, for integrity of gastrointestinal lining, for treatment of disturbances in fertility, contraception or pregnancy.
30. Pharmaceutical composition according to any one of claims 23 to 29 for surgical local application, topical or systemic application.
31 . Pharmaceutical compostion according to any one of claims 23 to 30 characterized in that it further contains pharmacologically acceptable auxiliary substances.
32. Pharmaceutical composition according to any one of claims 30 or 31 , characterized in that the composition is injectable.
33. Pharmaceutical composition according to anyone of claims 30 to 32, characterized in that it is contained in a vehicle that allows to direct and release the composition to a determined site of action.
34. Pharmaceutical composition according to claim 33, characterized in that the vehicle is selected from liposomes, nanospheres, larger implantable containers and micropumps.
35. Use of a pharmaceutical composition according to any one of claims 23 to 34 for the prevention or treatment of any indications of the dimeric form of the protein.
PCT/EP2000/007600 1996-12-25 2000-08-04 MONOMERIC PROTEIN OF THE TGF-β FAMILY Ceased WO2001011041A1 (en)

Priority Applications (12)

Application Number Priority Date Filing Date Title
DK00958383T DK1198570T3 (en) 1999-08-06 2000-08-04 Monomeric protein of the TGF-Beta family
AT00958383T ATE299937T1 (en) 1999-08-06 2000-08-04 MONOMERIC PROTEIN OF THE TGF-BETA FAMILY
US10/048,458 US6972321B1 (en) 1999-08-06 2000-08-04 Monomeric protein of the TGF-β family
NZ517125A NZ517125A (en) 1999-08-06 2000-08-04 Monomeric protein of the TGF-beta family
AU69927/00A AU782481B2 (en) 1999-08-06 2000-08-04 Monomeric protein of the TGF-beta family
DE60021388T DE60021388T2 (en) 1999-08-06 2000-08-04 MONOMERES PROTEIN OF THE TGF-BETA FAMILY
CA002381219A CA2381219C (en) 1999-08-06 2000-08-04 Monomeric protein of the tgf-beta family
EP00958383A EP1198570B1 (en) 1999-08-06 2000-08-04 Monomeric protein of the tgf-beta family
JP2001515827A JP2003506086A (en) 1999-08-06 2000-08-04 TGF-β family monomeric protein
US10/414,954 US20040019185A1 (en) 1996-12-25 2003-04-16 Process for preparing purified active monomer of bone-derived factor
US10/734,583 US7811793B2 (en) 1996-12-25 2003-12-15 Process for preparing purified active monomer of bone-derived factor
US11/191,072 US7569227B2 (en) 1999-08-06 2005-07-28 Monomeric protein of the TGF-β family

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
EP99115613.4 1999-08-06
EP99115613A EP1074620A1 (en) 1999-08-06 1999-08-06 Monomeric protein of the TGF-beta family

Related Child Applications (4)

Application Number Title Priority Date Filing Date
US10048458 A-371-Of-International 2000-08-04
US10/414,954 Continuation-In-Part US20040019185A1 (en) 1996-12-25 2003-04-16 Process for preparing purified active monomer of bone-derived factor
US10/734,583 Continuation-In-Part US7811793B2 (en) 1996-12-25 2003-12-15 Process for preparing purified active monomer of bone-derived factor
US11/191,072 Continuation US7569227B2 (en) 1999-08-06 2005-07-28 Monomeric protein of the TGF-β family

Publications (1)

Publication Number Publication Date
WO2001011041A1 true WO2001011041A1 (en) 2001-02-15

Family

ID=8238746

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/EP2000/007600 Ceased WO2001011041A1 (en) 1996-12-25 2000-08-04 MONOMERIC PROTEIN OF THE TGF-β FAMILY

Country Status (12)

Country Link
US (2) US6972321B1 (en)
EP (3) EP1074620A1 (en)
JP (1) JP2003506086A (en)
AT (1) ATE299937T1 (en)
AU (1) AU782481B2 (en)
CA (1) CA2381219C (en)
DE (1) DE60021388T2 (en)
DK (1) DK1198570T3 (en)
ES (1) ES2242630T3 (en)
NZ (1) NZ517125A (en)
WO (1) WO2001011041A1 (en)
ZA (1) ZA200201032B (en)

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