WO2001061015A3 - Thermostable chimeric nucleic acid polymerases and uses thereof - Google Patents

Thermostable chimeric nucleic acid polymerases and uses thereof Download PDF

Info

Publication number
WO2001061015A3
WO2001061015A3 PCT/EP2001/001790 EP0101790W WO0161015A3 WO 2001061015 A3 WO2001061015 A3 WO 2001061015A3 EP 0101790 W EP0101790 W EP 0101790W WO 0161015 A3 WO0161015 A3 WO 0161015A3
Authority
WO
WIPO (PCT)
Prior art keywords
nucleic acid
chimeric nucleic
polymerases
acid polymerases
thermostable
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Ceased
Application number
PCT/EP2001/001790
Other languages
German (de)
French (fr)
Other versions
WO2001061015A2 (en
Inventor
Dirk Loeffert
Andreas Missel
Jie Kang
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Qiagen GmbH
Original Assignee
Qiagen GmbH
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Qiagen GmbH filed Critical Qiagen GmbH
Priority to DE60133992T priority Critical patent/DE60133992D1/en
Priority to EP01953004A priority patent/EP1259624B1/en
Publication of WO2001061015A2 publication Critical patent/WO2001061015A2/en
Publication of WO2001061015A3 publication Critical patent/WO2001061015A3/en
Priority to US10/216,682 priority patent/US8637288B2/en
Anticipated expiration legal-status Critical
Priority to US14/108,863 priority patent/US20140154748A1/en
Ceased legal-status Critical Current

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12PFERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
    • C12P19/00Preparation of compounds containing saccharide radicals
    • C12P19/26Preparation of nitrogen-containing carbohydrates
    • C12P19/28N-glycosides
    • C12P19/30Nucleotides
    • C12P19/34Polynucleotides, e.g. nucleic acids, oligoribonucleotides
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/10Transferases (2.)
    • C12N9/12Transferases (2.) transferring phosphorus containing groups, e.g. kinases (2.7)
    • C12N9/1241Nucleotidyltransferases (2.7.7)
    • C12N9/1252DNA-directed DNA polymerase (2.7.7.7), i.e. DNA replicase
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K2319/00Fusion polypeptide

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Molecular Biology (AREA)
  • Engineering & Computer Science (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Genetics & Genomics (AREA)
  • Microbiology (AREA)
  • Biotechnology (AREA)
  • Biochemistry (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Biomedical Technology (AREA)
  • Medicinal Chemistry (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • General Chemical & Material Sciences (AREA)
  • Enzymes And Modification Thereof (AREA)
  • Micro-Organisms Or Cultivation Processes Thereof (AREA)
  • Saccharide Compounds (AREA)
  • Heat Sensitive Colour Forming Recording (AREA)

Abstract

Novel thermostable chimeric nucleic acid polymerases and methods for their generation and use are disclosed. It is shown that these chimeric nucleic acid polymerases, such as DNA polymerases, can be constructed using enzymatically active domains, isolated from different proteins or chemically synthesized. It is demonstrated that chimeric nucleic acid polymerases of the present invention possess the chemical and physical properties of their component domains (e.g., exonuclease activity, thermostability) and that the chimeric polymerases are thermostable.
PCT/EP2001/001790 2000-02-17 2001-02-16 Thermostable chimeric nucleic acid polymerases and uses thereof Ceased WO2001061015A2 (en)

Priority Applications (4)

Application Number Priority Date Filing Date Title
DE60133992T DE60133992D1 (en) 2000-02-17 2001-02-16 THERMOSTABILE CHIMERIC NUCLEIC ACID POLYMERASES AND ITS USES
EP01953004A EP1259624B1 (en) 2000-02-17 2001-02-16 Thermostable chimeric nucleic acid polymerases and uses thereof
US10/216,682 US8637288B2 (en) 2000-02-17 2002-08-08 Thermostable chimeric nucleic acid polymerases and uses thereof
US14/108,863 US20140154748A1 (en) 2000-02-17 2013-12-17 Thermostable chimeric nucleic acid polymerases and uses thereof

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US50615300A 2000-02-17 2000-02-17
US09/506,153 2000-02-17

Related Parent Applications (1)

Application Number Title Priority Date Filing Date
US50615300A Continuation-In-Part 2000-02-17 2000-02-17

Related Child Applications (1)

Application Number Title Priority Date Filing Date
US10/216,682 Continuation US8637288B2 (en) 2000-02-17 2002-08-08 Thermostable chimeric nucleic acid polymerases and uses thereof

Publications (2)

Publication Number Publication Date
WO2001061015A2 WO2001061015A2 (en) 2001-08-23
WO2001061015A3 true WO2001061015A3 (en) 2002-04-25

Family

ID=24013413

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/EP2001/001790 Ceased WO2001061015A2 (en) 2000-02-17 2001-02-16 Thermostable chimeric nucleic acid polymerases and uses thereof

Country Status (5)

Country Link
US (2) US8637288B2 (en)
EP (2) EP1925669B1 (en)
AT (2) ATE491031T1 (en)
DE (2) DE60143632D1 (en)
WO (1) WO2001061015A2 (en)

Families Citing this family (31)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2001061015A2 (en) 2000-02-17 2001-08-23 Qiagen Gmbh Thermostable chimeric nucleic acid polymerases and uses thereof
US6627424B1 (en) 2000-05-26 2003-09-30 Mj Bioworks, Inc. Nucleic acid modifying enzymes
DE10049211A1 (en) 2000-10-05 2002-04-18 Qiagen Gmbh Thermostable polymerase from Thermococcus pacificus
AU2002351193A1 (en) 2001-11-28 2003-06-10 Mj Bioworks Incorporated Parallel polymorphism scoring by amplification and error correction
JP4575160B2 (en) * 2002-07-25 2010-11-04 バイオ−ラッド ラボラトリーズ インコーポレーティッド Hybrid protein methods and compositions
US7560260B2 (en) 2002-07-25 2009-07-14 Bio-Rad Laboratories, Inc. Compositions with polymerase activity
US7960157B2 (en) 2002-12-20 2011-06-14 Agilent Technologies, Inc. DNA polymerase blends and uses thereof
JP4722035B2 (en) 2003-03-25 2011-07-13 アジレント・テクノロジーズ・インク DNA polymerase fusion and use thereof
US20060099567A1 (en) * 2004-04-08 2006-05-11 Biomatrica, Inc. Integration of sample storage and sample management for life science
US20080176209A1 (en) * 2004-04-08 2008-07-24 Biomatrica, Inc. Integration of sample storage and sample management for life science
CA2560513A1 (en) * 2004-04-08 2005-12-01 Biomatrica, Inc. Integration of sample storage and sample management for life science
GB2416538B (en) * 2004-07-26 2008-07-30 Bioline Ltd Chimeric DNA polymerase
US9481912B2 (en) * 2006-09-12 2016-11-01 Longhorn Vaccines And Diagnostics, Llc Compositions and methods for detecting and identifying nucleic acid sequences in biological samples
US8652782B2 (en) * 2006-09-12 2014-02-18 Longhorn Vaccines & Diagnostics, Llc Compositions and methods for detecting, identifying and quantitating mycobacterial-specific nucleic acids
US11041215B2 (en) 2007-08-24 2021-06-22 Longhorn Vaccines And Diagnostics, Llc PCR ready compositions and methods for detecting and identifying nucleic acid sequences
US20140038174A1 (en) * 2011-04-26 2014-02-06 Longhorn Vaccines And Diagnostics, Llc Compositions and Methods for Detecting and Identifying Nucleic Acid Sequences in Biological Samples
DK2279263T3 (en) 2008-04-30 2013-11-11 Integrated Dna Tech Inc RNASE-H-BASED ASSAYS USING MODIFIED RNA MONOMERS
US9434988B2 (en) 2008-04-30 2016-09-06 Integrated Dna Technologies, Inc. RNase H-based assays utilizing modified RNA monomers
US8911948B2 (en) 2008-04-30 2014-12-16 Integrated Dna Technologies, Inc. RNase H-based assays utilizing modified RNA monomers
WO2010062776A2 (en) 2008-11-03 2010-06-03 Kapabiosystems Chimeric dna polymerases
EP2430195B1 (en) * 2009-05-11 2019-01-23 Biomatrica, INC. Compositions and methods for biological sample storage
US9845489B2 (en) 2010-07-26 2017-12-19 Biomatrica, Inc. Compositions for stabilizing DNA, RNA and proteins in saliva and other biological samples during shipping and storage at ambient temperatures
CA2806670A1 (en) 2010-07-26 2012-02-09 Biomatrica, Inc. Compositions for stabilizing dna, rna and proteins in blood and other biological samples during shipping and storage at ambient temperatures
US9725703B2 (en) 2012-12-20 2017-08-08 Biomatrica, Inc. Formulations and methods for stabilizing PCR reagents
US10023856B2 (en) * 2013-09-25 2018-07-17 Thermo Fisher Scientific Baltics Uab Enzyme composition for DNA end repair, adenylation, phosphorylation
EP2986719B1 (en) 2013-12-06 2020-07-29 Bio-Rad Laboratories, Inc. Fusion polymerases
CN106572650B (en) 2014-06-10 2021-08-31 生物马特里卡公司 Stabilizes thrombocytes at ambient temperature
US10364420B2 (en) 2015-12-07 2019-07-30 Bio-Rad Laboratories, Inc Dimeric reverse transcriptase
SG11201804776SA (en) 2015-12-08 2018-07-30 Biomatrica Inc Reduction of erythrocyte sedimentation rate
CN114829593B (en) * 2019-12-23 2023-11-14 深圳华大生命科学研究院 Chimeric DNA polymerase and application thereof
CN117050967B (en) * 2023-08-21 2024-04-09 南京诺唯赞生物科技股份有限公司 A method for improving GC balance of next-generation sequencing library

Citations (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO1992006200A1 (en) * 1990-09-28 1992-04-16 F. Hoffmann-La-Roche Ag 5' to 3' exonuclease mutations of thermostable dna polymerases
WO1997029209A1 (en) * 1996-02-09 1997-08-14 President And Fellows Of Harvard College Dna polymerase with modified processivity
EP0892058A2 (en) * 1997-07-09 1999-01-20 F. Hoffmann-La Roche Ag Mutant chimeric DNA polymerases
WO1999047649A2 (en) * 1998-03-13 1999-09-23 Roche Diagnostics Gmbh Polymerase chimeras
GB2344591A (en) * 1998-08-24 2000-06-14 Bioline Limited A chimaeric DNA polymerase
WO2001018213A1 (en) * 1999-09-09 2001-03-15 Dzieglewska, Hanna Chimeric thermostable dna polymerases

Family Cites Families (29)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US4683202A (en) 1985-03-28 1987-07-28 Cetus Corporation Process for amplifying nucleic acid sequences
US4683195A (en) 1986-01-30 1987-07-28 Cetus Corporation Process for amplifying, detecting, and/or-cloning nucleic acid sequences
US4965188A (en) 1986-08-22 1990-10-23 Cetus Corporation Process for amplifying, detecting, and/or cloning nucleic acid sequences using a thermostable enzyme
US4800159A (en) 1986-02-07 1989-01-24 Cetus Corporation Process for amplifying, detecting, and/or cloning nucleic acid sequences
US4889818A (en) 1986-08-22 1989-12-26 Cetus Corporation Purified thermostable enzyme
US5079352A (en) 1986-08-22 1992-01-07 Cetus Corporation Purified thermostable enzyme
US5242818A (en) 1988-08-26 1993-09-07 Toyo Boseki Kabushiki Kaisha Method of producing a thermostable DNA polymerase from Thermus thermophilus
US5066584A (en) 1988-09-23 1991-11-19 Cetus Corporation Methods for generating single stranded dna by the polymerase chain reaction
US5091310A (en) 1988-09-23 1992-02-25 Cetus Corporation Structure-independent dna amplification by the polymerase chain reaction
US5075216A (en) 1988-09-23 1991-12-24 Cetus Corporation Methods for dna sequencing with thermus aquaticus dna polymerase
US5023171A (en) 1989-08-10 1991-06-11 Mayo Foundation For Medical Education And Research Method for gene splicing by overlap extension using the polymerase chain reaction
US5104792A (en) 1989-12-21 1992-04-14 The United States Of America As Represented By The Department Of Health And Human Services Method for amplifying unknown nucleic acid sequences
US5210036A (en) 1990-04-26 1993-05-11 New England Biolabs, Inc. Purified thermostable DNA polymerase obtainable from thermococcus litoralis
US5436149A (en) 1993-02-19 1995-07-25 Barnes; Wayne M. Thermostable DNA polymerase with enhanced thermostability and enhanced length and efficiency of primer extension
US5491086A (en) 1993-05-14 1996-02-13 Hoffmann-La Roche Inc. Purified thermostable nucleic acid polymerase and DNA coding sequences from pyrodictium species
US5912155A (en) 1994-09-30 1999-06-15 Life Technologies, Inc. Cloned DNA polymerases from Thermotoga neapolitana
CN1123328A (en) 1994-11-17 1996-05-29 中国科学院上海生物化学研究所 High-temperature, high-fidelity deoxyribonucleic acid (DNA) polymerase (HiFi Bst)
US5602011A (en) 1995-01-18 1997-02-11 Pharmacia Biotech Inc. Purified Thermococcus barossii DNA polymerase
JP3112148B2 (en) 1995-05-31 2000-11-27 東洋紡績株式会社 Nucleic acid amplification method and reagent therefor
WO1998023774A1 (en) * 1996-11-29 1998-06-04 Third Wave Technologies, Inc. Fen-1 endonucleases, mixtures and cleavage methods
EP0822256B1 (en) 1996-07-29 2003-09-24 Toyo Boseki Kabushiki Kaisha Modified thermostable DNA polymerase, and DNA polymerase composition for nucleic acid amplification
EP0834570A1 (en) 1996-10-03 1998-04-08 Roche Diagnostics GmbH Thermostable nucleic acid polymerase from Thermococcus gorgonarius
EP0834571A1 (en) 1996-10-03 1998-04-08 Roche Diagnostics GmbH Thermostable nucleic acid polymerase from Thermococcus gorgonarius
WO1998049274A1 (en) 1997-04-29 1998-11-05 Appligene-Oncor Thermostable dna polymerase and inteins of the thermococcus fumicolans species
US20030228616A1 (en) 1999-10-29 2003-12-11 Stratagene DNA polymerase mutants with reverse transcriptase activity
WO2001061015A2 (en) 2000-02-17 2001-08-23 Qiagen Gmbh Thermostable chimeric nucleic acid polymerases and uses thereof
US6627424B1 (en) * 2000-05-26 2003-09-30 Mj Bioworks, Inc. Nucleic acid modifying enzymes
EP1322936A2 (en) 2000-10-03 2003-07-02 California Institute Of Technology Microfluidic devices and methods of use
DE10049211A1 (en) 2000-10-05 2002-04-18 Qiagen Gmbh Thermostable polymerase from Thermococcus pacificus

Patent Citations (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO1992006200A1 (en) * 1990-09-28 1992-04-16 F. Hoffmann-La-Roche Ag 5' to 3' exonuclease mutations of thermostable dna polymerases
WO1997029209A1 (en) * 1996-02-09 1997-08-14 President And Fellows Of Harvard College Dna polymerase with modified processivity
EP0892058A2 (en) * 1997-07-09 1999-01-20 F. Hoffmann-La Roche Ag Mutant chimeric DNA polymerases
WO1999047649A2 (en) * 1998-03-13 1999-09-23 Roche Diagnostics Gmbh Polymerase chimeras
GB2344591A (en) * 1998-08-24 2000-06-14 Bioline Limited A chimaeric DNA polymerase
WO2001018213A1 (en) * 1999-09-09 2001-03-15 Dzieglewska, Hanna Chimeric thermostable dna polymerases

Also Published As

Publication number Publication date
DE60143632D1 (en) 2011-01-20
DE60133992D1 (en) 2008-06-26
US20030138805A1 (en) 2003-07-24
EP1925669A1 (en) 2008-05-28
ATE491031T1 (en) 2010-12-15
EP1259624A2 (en) 2002-11-27
EP1259624B1 (en) 2008-05-14
US20140154748A1 (en) 2014-06-05
WO2001061015A2 (en) 2001-08-23
US8637288B2 (en) 2014-01-28
EP1925669B1 (en) 2010-12-08
ATE395420T1 (en) 2008-05-15

Similar Documents

Publication Publication Date Title
WO2001061015A3 (en) Thermostable chimeric nucleic acid polymerases and uses thereof
CA2335153A1 (en) Enzyme stabilization by cationic surfactants
EP2272952B8 (en) Thermostable or thermoactive DNA polymerase with attenuated 3'-5' exonuclease activity
WO1999054459A8 (en) Nucleic acid molecules with novel chemical compositions capable of modulating gene expression
EP0892058A3 (en) Mutant chimeric DNA polymerases
WO2001051621A3 (en) Dna polymerase mutant having one or more mutations in the active site
WO2005084409A3 (en) Rna-dependent dna polymerase from geobacillus stearothermophilus
AU2002365811A1 (en) Methods for the selection and cloning of nucleic acid molecules free of unwanted nucleotide sequence alterations
EP1319719B8 (en) Reversibly modified thermostable enzymes for DNA synthesis and amplification in vitro
WO2004024749A3 (en) Thermostable reverse transcriptases and uses thereof
ATE346938T1 (en) POLYKETIDE SYNTHASE ENZYMES AND RECOMBINANT DNA CONSTRUCTS FOR PRODUCING COMPOUNDS RELATED TO FK-506 AND FK-520
WO2003025117A3 (en) Cloning and sequencing of pyruvate decarboxylase (pdc) genes from bacteria and uses therefor
ATE321867T1 (en) COMPOSITIONS AND METHODS OF USING DNA POLYMERASES
CA2123354A1 (en) Thermostable nucleic acid polymerase
WO2002038806A3 (en) Detection of nucleic acid polymorphisms
CA2205382A1 (en) Enzymatic dna molecules
WO2005007867A3 (en) Thermostable amylase polypeptides, nucleic acids encoding those polypeptides and uses thereof
WO2001094562A3 (en) Cold sensitive mutant dna polymerases
ATE269402T1 (en) IKK-BETA PROTEINS, NUCLEIC ACIDS AND METHODS
AU3928999A (en) Novel n-oxides
EP1507002A3 (en) Thermostable Taq polymerase fragment
DE60138029D1 (en) PROCESS FOR THE PRODUCTION OF BIOPTERINES
DE60229050D1 (en) PROCESS FOR THE PREPARATION OF ASCORBIC ACID INTERMEDIATE PRODUCTS IN HOST CELLS
WO2001025483A3 (en) Compositions for dna amplification, synthesis, and mutagenesis
WO1995014782A3 (en) A modified thermo resistant dna polymerase

Legal Events

Date Code Title Description
AK Designated states

Kind code of ref document: A2

Designated state(s): JP US

AL Designated countries for regional patents

Kind code of ref document: A2

Designated state(s): AT BE CH CY DE DK ES FI FR GB GR IE IT LU MC NL PT SE TR

DFPE Request for preliminary examination filed prior to expiration of 19th month from priority date (pct application filed before 20040101)
121 Ep: the epo has been informed by wipo that ep was designated in this application
WWE Wipo information: entry into national phase

Ref document number: 10216682

Country of ref document: US

WWE Wipo information: entry into national phase

Ref document number: 2001953004

Country of ref document: EP

WWP Wipo information: published in national office

Ref document number: 2001953004

Country of ref document: EP

NENP Non-entry into the national phase

Ref country code: JP

WWG Wipo information: grant in national office

Ref document number: 2001953004

Country of ref document: EP