WO2004004698A3 - Proteins binding to cross-beta structure comprising amyloid and methods for detection and modulation of the cross-beta structure, its formation and its associated toxicity - Google Patents

Proteins binding to cross-beta structure comprising amyloid and methods for detection and modulation of the cross-beta structure, its formation and its associated toxicity Download PDF

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Publication number
WO2004004698A3
WO2004004698A3 PCT/NL2003/000501 NL0300501W WO2004004698A3 WO 2004004698 A3 WO2004004698 A3 WO 2004004698A3 NL 0300501 W NL0300501 W NL 0300501W WO 2004004698 A3 WO2004004698 A3 WO 2004004698A3
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WO
WIPO (PCT)
Prior art keywords
cross
beta structure
methods
beta
formation
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Ceased
Application number
PCT/NL2003/000501
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French (fr)
Other versions
WO2004004698A2 (en
Inventor
Martijn Frans Ben Gera Gebbink
Barend Bouma
Onno Wouter Kranenburg
Louise Maria Johanna Kroon
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Universiteit Utrecht Holding BV
Universitair Medisch Centrum Utrecht
Original Assignee
Universiteit Utrecht Holding BV
Universitair Medisch Centrum Utrecht
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Filing date
Publication date
Application filed by Universiteit Utrecht Holding BV, Universitair Medisch Centrum Utrecht filed Critical Universiteit Utrecht Holding BV
Priority to DE60325381T priority Critical patent/DE60325381D1/en
Priority to NZ537495A priority patent/NZ537495A/en
Priority to DK03762927T priority patent/DK1536778T3/en
Priority to AU2003251233A priority patent/AU2003251233B2/en
Priority to EP03762927A priority patent/EP1536778B1/en
Priority to CA002492010A priority patent/CA2492010A1/en
Priority to JP2004519368A priority patent/JP2005537254A/en
Publication of WO2004004698A2 publication Critical patent/WO2004004698A2/en
Publication of WO2004004698A3 publication Critical patent/WO2004004698A3/en
Anticipated expiration legal-status Critical
Priority to US11/033,105 priority patent/US20060045853A1/en
Priority to US11/087,102 priority patent/US20070003552A1/en
Priority to US11/982,161 priority patent/US8158585B2/en
Priority to US13/437,807 priority patent/US20120189615A1/en
Ceased legal-status Critical Current

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    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K31/00Medicinal preparations containing organic active ingredients
    • A61K31/70Carbohydrates; Sugars; Derivatives thereof
    • A61K31/7004Monosaccharides having only carbon, hydrogen and oxygen atoms
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K31/00Medicinal preparations containing organic active ingredients
    • AHUMAN NECESSITIES
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    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K31/00Medicinal preparations containing organic active ingredients
    • A61K31/185Acids; Anhydrides, halides or salts thereof, e.g. sulfur acids, imidic, hydrazonic or hydroximic acids
    • A61K31/19Carboxylic acids, e.g. valproic acid
    • A61K31/195Carboxylic acids, e.g. valproic acid having an amino group
    • AHUMAN NECESSITIES
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    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K31/00Medicinal preparations containing organic active ingredients
    • A61K31/185Acids; Anhydrides, halides or salts thereof, e.g. sulfur acids, imidic, hydrazonic or hydroximic acids
    • A61K31/19Carboxylic acids, e.g. valproic acid
    • A61K31/195Carboxylic acids, e.g. valproic acid having an amino group
    • A61K31/197Carboxylic acids, e.g. valproic acid having an amino group the amino and the carboxyl groups being attached to the same acyclic carbon chain, e.g. gamma-aminobutyric acid [GABA], beta-alanine, epsilon-aminocaproic acid or pantothenic acid
    • AHUMAN NECESSITIES
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    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K31/00Medicinal preparations containing organic active ingredients
    • A61K31/185Acids; Anhydrides, halides or salts thereof, e.g. sulfur acids, imidic, hydrazonic or hydroximic acids
    • A61K31/19Carboxylic acids, e.g. valproic acid
    • A61K31/195Carboxylic acids, e.g. valproic acid having an amino group
    • A61K31/197Carboxylic acids, e.g. valproic acid having an amino group the amino and the carboxyl groups being attached to the same acyclic carbon chain, e.g. gamma-aminobutyric acid [GABA], beta-alanine, epsilon-aminocaproic acid or pantothenic acid
    • A61K31/198Alpha-amino acids, e.g. alanine or edetic acid [EDTA]
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K38/00Medicinal preparations containing peptides
    • A61K38/16Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • A61K38/43Enzymes; Proenzymes; Derivatives thereof
    • A61K38/46Hydrolases (3)
    • A61K38/48Hydrolases (3) acting on peptide bonds (3.4)
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    • A61P9/10Drugs for disorders of the cardiovascular system for treating ischaemic or atherosclerotic diseases, e.g. antianginal drugs, coronary vasodilators, drugs for myocardial infarction, retinopathy, cerebrovascula insufficiency, renal arteriosclerosis
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K16/00Immunoglobulins [IG], e.g. monoclonal or polyclonal antibodies
    • C07K16/18Immunoglobulins [IG], e.g. monoclonal or polyclonal antibodies against material from animals or humans
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    • C12N9/00Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/14Hydrolases (3)
    • C12N9/48Hydrolases (3) acting on peptide bonds (3.4)
    • C12N9/50Proteinases, e.g. Endopeptidases (3.4.21-3.4.25)
    • C12N9/64Proteinases, e.g. Endopeptidases (3.4.21-3.4.25) derived from animal tissue
    • C12N9/6421Proteinases, e.g. Endopeptidases (3.4.21-3.4.25) derived from animal tissue from mammals
    • C12N9/6424Serine endopeptidases (3.4.21)
    • C12N9/6456Plasminogen activators
    • C12N9/6459Plasminogen activators t-plasminogen activator (3.4.21.68), i.e. tPA
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    • C12Y304/00Hydrolases acting on peptide bonds, i.e. peptidases (3.4)
    • C12Y304/21Serine endopeptidases (3.4.21)
    • C12Y304/21069Protein C activated (3.4.21.69)
    • GPHYSICS
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    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/68Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
    • G01N33/6854Immunoglobulins
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
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    • G01N33/6893Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids related to diseases not provided for elsewhere
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    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K2319/00Fusion polypeptide
    • C07K2319/20Fusion polypeptide containing a tag with affinity for a non-protein ligand
    • C07K2319/23Fusion polypeptide containing a tag with affinity for a non-protein ligand containing a GST-tag
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    • G01N2333/90Enzymes; Proenzymes
    • G01N2333/914Hydrolases (3)
    • G01N2333/948Hydrolases (3) acting on peptide bonds (3.4)
    • G01N2333/972Plasminogen activators
    • G01N2333/9726Tissue plasminogen activator
    • GPHYSICS
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Abstract

The invention relates to cross-beta structures and the biological role of these cross-beta structures. Methods for modulating extracellular protein degradation and/or protein clearance by dialysis or for diminishing plaques involved in conformational diseases by modulating cross-beta structure formation and/or tissue plasminogen activator (tPA)-like activity are disclosed, as well as diagnostic methods by visualising cross-beta structures.
PCT/NL2003/000501 2002-07-09 2003-07-08 Proteins binding to cross-beta structure comprising amyloid and methods for detection and modulation of the cross-beta structure, its formation and its associated toxicity Ceased WO2004004698A2 (en)

Priority Applications (11)

Application Number Priority Date Filing Date Title
DE60325381T DE60325381D1 (en) 2002-07-09 2003-07-08 PROTEINS BINDING THE CROSS-BETA STRUCTURE-CONTAINING AMYLOID, AND METHOD FOR MODULATING THE CROSS-BETA STRUCTURE, THEIR EDUCATION AND RELATED TOXICITY
NZ537495A NZ537495A (en) 2002-07-09 2003-07-08 Proteins binding to cross-beta structure comprising amyloid and methods for detection and modulation of the cross-beta structure, its formation and its associated toxicity
DK03762927T DK1536778T3 (en) 2002-07-09 2003-07-08 Proteins that bind to cross-beta structural amyloid and methods for modulating cross-beta structure, its formation and its associated toxicity
AU2003251233A AU2003251233B2 (en) 2002-07-09 2003-07-08 Proteins binding to cross-beta structure comprising amyloid and methods for detection and modulation of the cross-beta structure, its formation and its associated toxicity
EP03762927A EP1536778B1 (en) 2002-07-09 2003-07-08 Proteins binding to cross-beta structure comprising amyloid and methods for modulation of the cross-beta structure, its formation and its associated toxicity
CA002492010A CA2492010A1 (en) 2002-07-09 2003-07-08 Proteins binding to cross-beta structure comprising amyloid and methods for detection and modulation of the cross-beta structure, its formation and its associated toxicity
JP2004519368A JP2005537254A (en) 2002-07-09 2003-07-08 CROSS-β STRUCTURE COMPRISING AMYLOID-BINDING PROTEIN, METHOD FOR DETECTING CROSS-β STRUCTURE, METHOD FOR MODULATION OF CROSS-β STRUCTURE FIBRILLATION, AND METHOD FOR MODULATION OF TOXICITY TRANSPORTED BY CROSS-β STRUCTURE
US11/033,105 US20060045853A1 (en) 2002-07-09 2005-01-10 Cross-beta structure comprising amyloid-binding proteins and methods for detection of the cross-beta structure, for modulating cross-beta structures fibril formation and for modulating cross-beta structure-mediated toxicity
US11/087,102 US20070003552A1 (en) 2002-07-09 2005-03-21 Cross-beta structure comprising amyloid binding proteins and methods for detection of the cross-beta structure, for modulating cross-beta structures fibril formation and for modulating cross-beta structure-mediated toxicity and method for interfering with blood coagulation
US11/982,161 US8158585B2 (en) 2002-07-09 2007-10-31 Cross-β structure comprising amyloid-binding proteins and methods for detection of the cross-β structure, for modulating cross-β structures fiber formation and modulating cross-β structure-mediated toxicity
US13/437,807 US20120189615A1 (en) 2002-07-09 2012-04-02 CROSS-ß STRUCTURE COMPRISING AMYLOID-BINDING PROTEINS AND METHODS FOR DETECTION OF THE CROSS-ß STRUCTURE, FOR MODULATING CROSS-ß STRUCTURES FIBER FORMATION AND FOR MODULATING CROSS-ß STRUCTURE-MEDIATED TOXICITY

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
EP02077797.5 2002-07-09
EP02077797A EP1380290A1 (en) 2002-07-09 2002-07-09 Cross-beta structure pathway and its therapeutic relevance

Related Child Applications (1)

Application Number Title Priority Date Filing Date
US11/033,105 Continuation US20060045853A1 (en) 2002-07-09 2005-01-10 Cross-beta structure comprising amyloid-binding proteins and methods for detection of the cross-beta structure, for modulating cross-beta structures fibril formation and for modulating cross-beta structure-mediated toxicity

Publications (2)

Publication Number Publication Date
WO2004004698A2 WO2004004698A2 (en) 2004-01-15
WO2004004698A3 true WO2004004698A3 (en) 2004-06-10

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PCT/NL2003/000501 Ceased WO2004004698A2 (en) 2002-07-09 2003-07-08 Proteins binding to cross-beta structure comprising amyloid and methods for detection and modulation of the cross-beta structure, its formation and its associated toxicity

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Country Link
US (3) US20060045853A1 (en)
EP (5) EP1380290A1 (en)
JP (1) JP2005537254A (en)
AT (1) ATE417605T1 (en)
AU (2) AU2003251233B2 (en)
CA (1) CA2492010A1 (en)
DE (1) DE60325381D1 (en)
DK (1) DK1536778T3 (en)
ES (1) ES2319982T3 (en)
NZ (2) NZ561168A (en)
PT (1) PT1536778E (en)
WO (1) WO2004004698A2 (en)
ZA (1) ZA200500062B (en)

Families Citing this family (22)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP1820806A1 (en) * 2006-02-16 2007-08-22 Crossbeta Biosciences B.V. Affinity regions
US20070003552A1 (en) * 2002-07-09 2007-01-04 Gebbink Martijn F B Cross-beta structure comprising amyloid binding proteins and methods for detection of the cross-beta structure, for modulating cross-beta structures fibril formation and for modulating cross-beta structure-mediated toxicity and method for interfering with blood coagulation
EP1380290A1 (en) * 2002-07-09 2004-01-14 Universitair Medisch Centrum Utrecht Cross-beta structure pathway and its therapeutic relevance
EP1704867A1 (en) * 2005-03-18 2006-09-27 Crossbeta Biosciences B.V. Cross-beta structures on microbial organisms
US20090202980A1 (en) * 2005-03-21 2009-08-13 Crossbeta Biosciences B.V. Cross-Beta Structure Comprising Amyloid Binding Proteins and Methods for Detection of the Cross-Beta Structure, for Modulating Cross-Beta Structures Fibril Formation and for Modulating Cross-Beta Structure-Mediated Toxicity and Method for Interfering With Blood Coagulation
AU2006267176A1 (en) * 2005-07-13 2007-01-18 Crossbeta Biosciences B.V. Cross-beta structure binding compounds
US20070015133A1 (en) * 2005-07-13 2007-01-18 Umc Utrecht Holding B.V. Method for detecting and/or removing protein and/or peptide comprising a cross-beta structure from an aqueous solution comprising a protein
WO2007008073A2 (en) * 2005-07-13 2007-01-18 Crossbeta Biosciences B.V. METHODS FOR DETERMINING THE EFFECT OF A TREATMENT ON THE CROSS-ß STRUCTURE CONTENT OF A PROTEIN; SELECTION OF TREATMENTS AND USES THEREOF
US8114832B2 (en) * 2005-07-13 2012-02-14 Crossbeta Biosciences B.V. Method for detecting and/or removing a protein comprising a cross-beta structure from a pharmaceutical composition
BRPI0613525A2 (en) * 2005-07-13 2011-05-31 Crossbeta Biosciences Bv methods for producing an immunogenic composition, for enhancing the immunogenicity of a composition, for enhancing the immunogenicity of a vaccine composition, and for determining the amount of beta-cross structures in a vaccine composition, uses of beta-cross structures, and an immunogenic composition, subunit vaccine, and immunogenic composition
CA2645930A1 (en) * 2006-03-17 2007-09-27 Crossbeta Biosciences B.V. Methods of binding of cross-beta structures by chaperones
GB0710976D0 (en) 2007-06-07 2007-07-18 Bioalvo Am Screening method
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