WO2007005928A3 - Oleosin genes and promoters from coffee - Google Patents

Oleosin genes and promoters from coffee Download PDF

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Publication number
WO2007005928A3
WO2007005928A3 PCT/US2006/026121 US2006026121W WO2007005928A3 WO 2007005928 A3 WO2007005928 A3 WO 2007005928A3 US 2006026121 W US2006026121 W US 2006026121W WO 2007005928 A3 WO2007005928 A3 WO 2007005928A3
Authority
WO
WIPO (PCT)
Prior art keywords
coffee
promoters
oleosin
oleosin genes
genes
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Ceased
Application number
PCT/US2006/026121
Other languages
French (fr)
Other versions
WO2007005928A2 (en
Inventor
Andrew John Simkin
James Gerard Mccarthy
Vincent Petiard
Steven D Tanksley
Chenwei Lin
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Nestec SA
Cornell Research Foundation Inc
Original Assignee
Nestec SA
Cornell Research Foundation Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Priority to AU2006265068A priority Critical patent/AU2006265068A1/en
Priority to EP06786315A priority patent/EP1902132A2/en
Priority to BRPI0613726-1A priority patent/BRPI0613726A2/en
Priority to CA002613738A priority patent/CA2613738A1/en
Priority to AP2007004262A priority patent/AP2007004262A0/en
Priority to US11/988,045 priority patent/US7910718B2/en
Application filed by Nestec SA, Cornell Research Foundation Inc filed Critical Nestec SA
Priority to CN2006800242019A priority patent/CN101213302B/en
Publication of WO2007005928A2 publication Critical patent/WO2007005928A2/en
Publication of WO2007005928A3 publication Critical patent/WO2007005928A3/en
Priority to EC2007008012A priority patent/ECSP078012A/en
Anticipated expiration legal-status Critical
Ceased legal-status Critical Current

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    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/79—Vectors or expression systems specially adapted for eukaryotic hosts
    • C12N15/82—Vectors or expression systems specially adapted for eukaryotic hosts for plant cells, e.g. plant artificial chromosomes (PACs)
    • C12N15/8216—Methods for controlling, regulating or enhancing expression of transgenes in plant cells
    • C12N15/8222—Developmentally regulated expression systems, tissue, organ specific, temporal or spatial regulation
    • C12N15/823—Reproductive tissue-specific promoters
    • C12N15/8234—Seed-specific, e.g. embryo, endosperm
    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07K—PEPTIDES
    • C07K14/00—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/415—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from plants
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/79—Vectors or expression systems specially adapted for eukaryotic hosts
    • C12N15/82—Vectors or expression systems specially adapted for eukaryotic hosts for plant cells, e.g. plant artificial chromosomes (PACs)
    • C12N15/8216—Methods for controlling, regulating or enhancing expression of transgenes in plant cells
    • C12N15/8222—Developmentally regulated expression systems, tissue, organ specific, temporal or spatial regulation
    • C12N15/8223—Vegetative tissue-specific promoters
    • C12N15/8225—Leaf-specific, e.g. including petioles, stomata
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/79—Vectors or expression systems specially adapted for eukaryotic hosts
    • C12N15/82—Vectors or expression systems specially adapted for eukaryotic hosts for plant cells, e.g. plant artificial chromosomes (PACs)
    • C12N15/8241—Phenotypically and genetically modified plants via recombinant DNA technology
    • C12N15/8242—Phenotypically and genetically modified plants via recombinant DNA technology with non-agronomic quality (output) traits, e.g. for industrial processing; Value added, non-agronomic traits
    • C12N15/8243—Phenotypically and genetically modified plants via recombinant DNA technology with non-agronomic quality (output) traits, e.g. for industrial processing; Value added, non-agronomic traits involving biosynthetic or metabolic pathways, i.e. metabolic engineering, e.g. nicotine, caffeine
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/79—Vectors or expression systems specially adapted for eukaryotic hosts
    • C12N15/82—Vectors or expression systems specially adapted for eukaryotic hosts for plant cells, e.g. plant artificial chromosomes (PACs)
    • C12N15/8241—Phenotypically and genetically modified plants via recombinant DNA technology
    • C12N15/8242—Phenotypically and genetically modified plants via recombinant DNA technology with non-agronomic quality (output) traits, e.g. for industrial processing; Value added, non-agronomic traits
    • C12N15/8243—Phenotypically and genetically modified plants via recombinant DNA technology with non-agronomic quality (output) traits, e.g. for industrial processing; Value added, non-agronomic traits involving biosynthetic or metabolic pathways, i.e. metabolic engineering, e.g. nicotine, caffeine
    • C12N15/8247—Phenotypically and genetically modified plants via recombinant DNA technology with non-agronomic quality (output) traits, e.g. for industrial processing; Value added, non-agronomic traits involving biosynthetic or metabolic pathways, i.e. metabolic engineering, e.g. nicotine, caffeine involving modified lipid metabolism, e.g. seed oil composition

Landscapes

  • Health & Medical Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Engineering & Computer Science (AREA)
  • Chemical & Material Sciences (AREA)
  • Biomedical Technology (AREA)
  • Organic Chemistry (AREA)
  • Biotechnology (AREA)
  • General Engineering & Computer Science (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Wood Science & Technology (AREA)
  • Zoology (AREA)
  • Molecular Biology (AREA)
  • Biophysics (AREA)
  • Biochemistry (AREA)
  • General Health & Medical Sciences (AREA)
  • Microbiology (AREA)
  • Plant Pathology (AREA)
  • Physics & Mathematics (AREA)
  • Cell Biology (AREA)
  • Nutrition Science (AREA)
  • Botany (AREA)
  • Developmental Biology & Embryology (AREA)
  • Pregnancy & Childbirth (AREA)
  • Reproductive Health (AREA)
  • Oil, Petroleum & Natural Gas (AREA)
  • Gastroenterology & Hepatology (AREA)
  • Medicinal Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Breeding Of Plants And Reproduction By Means Of Culturing (AREA)
  • Micro-Organisms Or Cultivation Processes Thereof (AREA)
  • Peptides Or Proteins (AREA)
  • Tea And Coffee (AREA)

Abstract

Oleosin- and steroleosin-encoding polynucleotides from coffee plants are disclosed. Also disclosed are promoter sequences from coffee oleosin genes, and methods for using these polynucleotides and promoters for gene regulation and manipulation of flavor, aroma and other features of coffee beans.
PCT/US2006/026121 2005-07-01 2006-06-30 Oleosin genes and promoters from coffee Ceased WO2007005928A2 (en)

Priority Applications (8)

Application Number Priority Date Filing Date Title
EP06786315A EP1902132A2 (en) 2005-07-01 2006-06-30 Oleosin genes and promoters from coffee
BRPI0613726-1A BRPI0613726A2 (en) 2005-07-01 2006-06-30 coffee nucleic acid molecule (coffea spp), mrna and cdna molecule, oligonucleotide, vector, method for modulating the flavor or aroma of coffee beans, promoter, chimeric gene
CA002613738A CA2613738A1 (en) 2005-07-01 2006-06-30 Oleosin genes and promoters from coffee
AP2007004262A AP2007004262A0 (en) 2005-07-01 2006-06-30 Oleosin genes and promoters from coffee
US11/988,045 US7910718B2 (en) 2005-07-01 2006-06-30 Oleosin genes and promoters from coffee
AU2006265068A AU2006265068A1 (en) 2005-07-01 2006-06-30 Oleosin genes and promoters from coffee
CN2006800242019A CN101213302B (en) 2005-07-01 2006-06-30 Coffee oleosin genes and promoters
EC2007008012A ECSP078012A (en) 2005-07-01 2007-12-17 OLEOSINE GENES AND COFFEE PROMOTERS

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US69644505P 2005-07-01 2005-07-01
US60/696,445 2005-07-01

Publications (2)

Publication Number Publication Date
WO2007005928A2 WO2007005928A2 (en) 2007-01-11
WO2007005928A3 true WO2007005928A3 (en) 2007-08-09

Family

ID=37605175

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/US2006/026121 Ceased WO2007005928A2 (en) 2005-07-01 2006-06-30 Oleosin genes and promoters from coffee

Country Status (10)

Country Link
US (1) US7910718B2 (en)
EP (2) EP1902132A2 (en)
CN (1) CN101213302B (en)
AP (1) AP2007004262A0 (en)
AU (1) AU2006265068A1 (en)
BR (1) BRPI0613726A2 (en)
CA (1) CA2613738A1 (en)
EC (1) ECSP078012A (en)
WO (1) WO2007005928A2 (en)
ZA (1) ZA200801046B (en)

Families Citing this family (14)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
ITRM20070129A1 (en) * 2007-03-14 2008-09-15 Plantechno S R L TOBACCO PLANTS MUTAGENIZED AS SEED CULTURE FOR OIL PRODUCTION TO BE USED FOR INDUSTRIAL AND FOOD ENERGY PURPOSES
NZ554114A (en) * 2007-04-23 2010-01-29 Agres Ltd Plants with an increased ratio of oleosin to TAG synthesising enzymes
WO2009156371A1 (en) 2008-06-23 2009-12-30 Nestec S.A. Genes for modulating coffee maturation and methods for their use
CN101899447B (en) * 2009-05-26 2012-06-06 中国农业科学院油料作物研究所 Bnoleosin1 gene of rape DNA molecule and use thereof
TWI377954B (en) * 2009-11-25 2012-12-01 Univ China Medical Oil body carriers, uses in target therapy and/or detection of the same, and fusion proteins comprised therein
JP2013521003A (en) 2010-03-09 2013-06-10 ネステク ソシエテ アノニム Adjustment of galactomannan content in coffee
WO2011127118A1 (en) * 2010-04-06 2011-10-13 Algenetix, Inc. Methods of producing oil in non-plant organisms
WO2012126789A1 (en) 2011-03-18 2012-09-27 Nestec S.A. Production of chlorogenic and dactylifric acid species
BR102012008162B1 (en) * 2012-04-09 2018-08-14 Empresa Brasileira De Pesquisa Agropecuária - Embrapa compositions and methods for modifying the expression of genes of interest
CN102925480B (en) * 2012-11-02 2014-05-07 浙江大学 A plant expression vector for suppressing rice 2-PGK gene expression and method for cultivating low phytic acid rice
DE102012220083B3 (en) 2012-11-05 2014-03-06 Technische Universität Dresden Method and system for direct, radiationless energy transfer over liquid phase boundaries
WO2015069796A1 (en) 2013-11-05 2015-05-14 Board Of Regents, The University Of Texas System Methods for engineering sugar transporter preferences
WO2015179701A1 (en) * 2014-05-21 2015-11-26 Board Of Regents, The University Of Texas System Engineered xylose transporters with reduced glucose inhibition
US20230027430A1 (en) * 2019-12-16 2023-01-26 Cargill, Incorporated Isolated oleosome composition and process for preparing it

Citations (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2001036648A1 (en) * 1999-11-18 2001-05-25 Societe Des Produits Nestle S.A. Recombinant oleosins from cacao and their use as flavoring or emulsifying agents
WO2004013304A2 (en) * 2002-08-02 2004-02-12 Basf Plant Science Gmbh Sugar and lipid metabolism regulators in plants iv
WO2004111244A2 (en) * 2003-06-17 2004-12-23 Sembiosys Genetics Inc. Methods for the production of insulin in plants
WO2004113520A2 (en) * 2003-06-20 2004-12-29 Nestec S.A. Modulation of coffee flavour precursor levels in green coffee grains
WO2005047455A2 (en) * 2003-11-14 2005-05-26 Sembiosys Genetics Inc. Methods for the production of apolipoproteins in transgenic plants

Family Cites Families (11)

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US3962321A (en) 1972-04-11 1976-06-08 General Foods Corporation Enhancement of coffee flavor
US4072761A (en) 1975-11-24 1978-02-07 Societe D'assistance Technique Pour Produits Nestle S.A. Aromatization of coffee products
US5948667A (en) 1996-11-13 1999-09-07 Her Majesty The Queen In Right Of Canada, As Represented By The Department Of Agriculture And Agri-Food Xylanase obtained from an anaerobic fungus
US5977436A (en) * 1997-04-09 1999-11-02 Rhone Poulenc Agrochimie Oleosin 5' regulatory region for the modification of plant seed lipid composition
BR9809691A (en) 1997-05-27 2000-10-03 Sembiosys Genetics Inc Uses of oil substances
JPH1156248A (en) 1997-06-09 1999-03-02 Ajinomoto Co Inc Separation and production of substance containing high concentration of oil and indentured protein from oil-containing seed
US6586658B1 (en) 1998-03-06 2003-07-01 Metabolix, Inc. Modification of fatty acid metabolism in plants
US7008664B1 (en) * 1998-06-11 2006-03-07 E. I. Du Pont De Nemours And Company Method for improving the carcass quality of an animal
AU5788299A (en) 1998-08-28 2000-03-21 Pioneer Hi-Bred International, Inc. Seed-preferred promoters from (end) genes
US6501004B1 (en) 1999-05-06 2002-12-31 National Research Council Of Canada Transgenic reduction of sinapine in crucifera
AU2004262481A1 (en) 2003-08-12 2005-02-17 Unilever Plc Ice confection and its manufacturing process

Patent Citations (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2001036648A1 (en) * 1999-11-18 2001-05-25 Societe Des Produits Nestle S.A. Recombinant oleosins from cacao and their use as flavoring or emulsifying agents
WO2004013304A2 (en) * 2002-08-02 2004-02-12 Basf Plant Science Gmbh Sugar and lipid metabolism regulators in plants iv
WO2004111244A2 (en) * 2003-06-17 2004-12-23 Sembiosys Genetics Inc. Methods for the production of insulin in plants
WO2004113520A2 (en) * 2003-06-20 2004-12-29 Nestec S.A. Modulation of coffee flavour precursor levels in green coffee grains
WO2005047455A2 (en) * 2003-11-14 2005-05-26 Sembiosys Genetics Inc. Methods for the production of apolipoproteins in transgenic plants

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Title
CHEN JEFF C F ET AL: "Cloning, expression and isoform classification of a minor oleosin in sesame oil bodies", JOURNAL OF BIOCHEMISTRY (TOKYO), vol. 122, no. 4, October 1997 (1997-10-01), pages 819 - 824, XP002416737, ISSN: 0021-924X *
DATABASE EMBL [online] 2 June 1997 (1997-06-02), "Sesamum indicum 15.5 kDa oleosin mRNA, complete cds.", XP002416744, retrieved from EBI accession no. EM_PRO:U97700 Database accession no. U97700 *
DATABASE EMBL [online] 23 December 2005 (2005-12-23), "Coffea arabica oleosin mRNA, complete cds.", XP002416745, retrieved from EBI accession no. EM_PRO:AY928084 Database accession no. AY928084 *
DATABASE EMBL [online] 23 December 2005 (2005-12-23), "Coffea canephora STO-1 mRNA, complete cds.", XP002433929, retrieved from EBI accession no. EMBL:AY841276 Database accession no. AY841276 *
DATABASE EMBL [online] 3 June 2002 (2002-06-03), "Sesamum indicum steroleosin-B mRNA, complete cds.", XP002433925, retrieved from EBI accession no. EMBL:AF498264 Database accession no. AF498264 *
KIM HYUN UK ET AL: "A novel group of oleosins is present inside the pollen of Arabidopsis", JOURNAL OF BIOLOGICAL CHEMISTRY, vol. 277, no. 25, 21 June 2002 (2002-06-21), pages 22677 - 22684, XP002416739, ISSN: 0021-9258 *
LEPRINCE O ET AL: "OLEOSINS PREVENT OIL-BODY COALESCENCE DURING SEED IMBIBITION AS SUGGESTED BY A LOW-TEMPERATURE SCANNING ELECTRON MICROSCOPE STUDY OF DESICCATION-TOLERANT AND -SENSITIVE OILSEEDS", PLANTA, SPRINGER VERLAG, DE, vol. 204, 1998, pages 109 - 119, XP000885490, ISSN: 0032-0935 *
LIN LI-JEN ET AL: "Steroleosin, a sterol-binding dehydrogenase in seed oil bodies", PLANT PHYSIOLOGY (ROCKVILLE), vol. 128, no. 4, April 2002 (2002-04-01), pages 1200 - 1211, XP002416741, ISSN: 0032-0889 *
LIN LI-JEN ET AL: "Two distinct steroleosins are present in seed oil bodies", PLANT PHYSIOLOGY AND BIOCHEMISTRY (PARIS), vol. 42, no. 7-8, July 2004 (2004-07-01), pages 601 - 608, XP004545182, ISSN: 0981-9428 *
MURPHY DENIS J ET AL: "Role of lipid bodies and lipid-body proteins in seeds and other tissues", JOURNAL OF PLANT PHYSIOLOGY, vol. 158, no. 4, April 2001 (2001-04-01), pages 471 - 478, XP002416740, ISSN: 0176-1617 *
SIMKIN ANDREW J ET AL: "Oleosin gene family of Coffea canephora: Quantitative expression analysis of five oleosin genes in developing and germinating coffee grain", JOURNAL OF PLANT PHYSIOLOGY, vol. 163, no. 7, May 2006 (2006-05-01), pages 691 - 708, XP002416738, ISSN: 0176-1617 *

Also Published As

Publication number Publication date
AP2007004262A0 (en) 2007-12-31
AU2006265068A1 (en) 2007-01-11
US20090229007A1 (en) 2009-09-10
CN101213302A (en) 2008-07-02
EP2189532A1 (en) 2010-05-26
US7910718B2 (en) 2011-03-22
CN101213302B (en) 2012-09-05
ZA200801046B (en) 2009-07-29
CA2613738A1 (en) 2007-01-11
WO2007005928A2 (en) 2007-01-11
ECSP078012A (en) 2008-03-26
BRPI0613726A2 (en) 2011-02-01
EP1902132A2 (en) 2008-03-26

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