WO2013134174A3 - Recombinant bacteria comprising novel sucrose transporters - Google Patents

Recombinant bacteria comprising novel sucrose transporters Download PDF

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Publication number
WO2013134174A3
WO2013134174A3 PCT/US2013/028970 US2013028970W WO2013134174A3 WO 2013134174 A3 WO2013134174 A3 WO 2013134174A3 US 2013028970 W US2013028970 W US 2013028970W WO 2013134174 A3 WO2013134174 A3 WO 2013134174A3
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WIPO (PCT)
Prior art keywords
recombinant bacteria
sucrose
recombinant
polypeptide
sucrose transporters
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Ceased
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PCT/US2013/028970
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French (fr)
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WO2013134174A2 (en
Inventor
Kristin Ruebling-Jass
Jean-Francois Tomb
Tina K. Van Dyk
Zheng YOU
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EIDP Inc
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EI Du Pont de Nemours and Co
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Application filed by EI Du Pont de Nemours and Co filed Critical EI Du Pont de Nemours and Co
Priority to AU2013230162A priority Critical patent/AU2013230162A1/en
Priority to JP2014561008A priority patent/JP2015509379A/en
Priority to CN201380012400.8A priority patent/CN104302661A/en
Priority to KR1020147027717A priority patent/KR20140132392A/en
Priority to SG11201405338YA priority patent/SG11201405338YA/en
Priority to IN6652DEN2014 priority patent/IN2014DN06652A/en
Priority to EP13709706.9A priority patent/EP2822960A2/en
Priority to US14/382,343 priority patent/US20150064755A1/en
Priority to CA2865014A priority patent/CA2865014A1/en
Publication of WO2013134174A2 publication Critical patent/WO2013134174A2/en
Publication of WO2013134174A3 publication Critical patent/WO2013134174A3/en
Anticipated expiration legal-status Critical
Ceased legal-status Critical Current

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    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/195Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from bacteria
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    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/195Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from bacteria
    • C07K14/24Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from bacteria from Enterobacteriaceae (F), e.g. Citrobacter, Serratia, Proteus, Providencia, Morganella, Yersinia
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    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/195Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from bacteria
    • C07K14/24Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from bacteria from Enterobacteriaceae (F), e.g. Citrobacter, Serratia, Proteus, Providencia, Morganella, Yersinia
    • C07K14/245Escherichia (G)
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    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/195Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from bacteria
    • C07K14/315Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from bacteria from Streptococcus (G), e.g. Enterococci
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    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/195Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from bacteria
    • C07K14/33Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from bacteria from Clostridium (G)
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    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/195Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from bacteria
    • C07K14/335Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from bacteria from Lactobacillus (G)
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    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/195Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from bacteria
    • C07K14/34Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from bacteria from Corynebacterium (G)
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    • C12N9/00Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/10Transferases (2.)
    • C12N9/1048Glycosyltransferases (2.4)
    • C12N9/1051Hexosyltransferases (2.4.1)
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    • C12N9/00Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/10Transferases (2.)
    • C12N9/12Transferases (2.) transferring phosphorus containing groups, e.g. kinases (2.7)
    • C12N9/1205Phosphotransferases with an alcohol group as acceptor (2.7.1), e.g. protein kinases
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    • C12N9/00Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/14Hydrolases (3)
    • C12N9/24Hydrolases (3) acting on glycosyl compounds (3.2)
    • C12N9/2402Hydrolases (3) acting on glycosyl compounds (3.2) hydrolysing O- and S- glycosyl compounds (3.2.1)
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    • C12N9/14Hydrolases (3)
    • C12N9/24Hydrolases (3) acting on glycosyl compounds (3.2)
    • C12N9/2402Hydrolases (3) acting on glycosyl compounds (3.2) hydrolysing O- and S- glycosyl compounds (3.2.1)
    • C12N9/2405Glucanases
    • C12N9/2408Glucanases acting on alpha -1,4-glucosidic bonds
    • C12N9/2431Beta-fructofuranosidase (3.2.1.26), i.e. invertase
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    • C12P7/00Preparation of oxygen-containing organic compounds
    • C12P7/02Preparation of oxygen-containing organic compounds containing a hydroxy group
    • C12P7/04Preparation of oxygen-containing organic compounds containing a hydroxy group acyclic
    • C12P7/18Preparation of oxygen-containing organic compounds containing a hydroxy group acyclic polyhydric
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    • C12P7/00Preparation of oxygen-containing organic compounds
    • C12P7/02Preparation of oxygen-containing organic compounds containing a hydroxy group
    • C12P7/04Preparation of oxygen-containing organic compounds containing a hydroxy group acyclic
    • C12P7/18Preparation of oxygen-containing organic compounds containing a hydroxy group acyclic polyhydric
    • C12P7/20Glycerol
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    • C12P7/00Preparation of oxygen-containing organic compounds
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    • C12YENZYMES
    • C12Y204/00Glycosyltransferases (2.4)
    • C12Y204/01Hexosyltransferases (2.4.1)
    • C12Y204/01007Sucrose phosphorylase (2.4.1.7)
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    • C12Y207/00Transferases transferring phosphorus-containing groups (2.7)
    • C12Y207/01Phosphotransferases with an alcohol group as acceptor (2.7.1)
    • C12Y207/01001Hexokinase (2.7.1.1)
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    • C12Y207/00Transferases transferring phosphorus-containing groups (2.7)
    • C12Y207/01Phosphotransferases with an alcohol group as acceptor (2.7.1)
    • C12Y207/01003Ketohexokinase (2.7.1.3)
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    • C12Y207/00Transferases transferring phosphorus-containing groups (2.7)
    • C12Y207/01Phosphotransferases with an alcohol group as acceptor (2.7.1)
    • C12Y207/01004Fructokinase (2.7.1.4)
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    • C12Y302/00Hydrolases acting on glycosyl compounds, i.e. glycosylases (3.2)
    • C12Y302/01Glycosidases, i.e. enzymes hydrolysing O- and S-glycosyl compounds (3.2.1)
    • C12Y302/01026Beta-fructofuranosidase (3.2.1.26), i.e. invertase

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  • Chemical & Material Sciences (AREA)
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  • Genetics & Genomics (AREA)
  • Zoology (AREA)
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  • Proteomics, Peptides & Aminoacids (AREA)
  • Biophysics (AREA)
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  • General Chemical & Material Sciences (AREA)
  • Micro-Organisms Or Cultivation Processes Thereof (AREA)
  • Preparation Of Compounds By Using Micro-Organisms (AREA)

Abstract

Recombinant bacteria capable of metabolizing sucrose are described. The recombinant bacteria comprise in their genome or on at least one recombinant construct, a novel nucleotide sequence encoding a polypeptide having sucrose transporter activity and a nucleotide sequence encoding a polypeptide having sucrose hydrolase activity. These nucleotide sequences are each operably linked to the same or a different promoter. Recombinant bacteria capable of metabolizing sucrose to produce glycerol and/or glycerol-derived products such as 1,3-propanediol and 3-hydroxypropionic acid are also described.
PCT/US2013/028970 2012-03-05 2013-03-05 Recombinant bacteria comprising novel sucrose transporters Ceased WO2013134174A2 (en)

Priority Applications (9)

Application Number Priority Date Filing Date Title
AU2013230162A AU2013230162A1 (en) 2012-03-05 2013-03-05 Recombinant bacteria comprising novel sucrose transporters
JP2014561008A JP2015509379A (en) 2012-03-05 2013-03-05 Recombinant bacteria comprising a novel sucrose transporter
CN201380012400.8A CN104302661A (en) 2012-03-05 2013-03-05 Recombinant bacteria comprising novel sucrose transporters
KR1020147027717A KR20140132392A (en) 2012-03-05 2013-03-05 Recombinant bacteria comprising novel sucrose transporters
SG11201405338YA SG11201405338YA (en) 2012-03-05 2013-03-05 Recombinant bacteria comprising novel sucrose transporters
IN6652DEN2014 IN2014DN06652A (en) 2012-03-05 2013-03-05
EP13709706.9A EP2822960A2 (en) 2012-03-05 2013-03-05 Recombinant bacteria comprising novel sucrose transporters
US14/382,343 US20150064755A1 (en) 2012-03-05 2013-03-05 Recombinant bacteria comprising novel sucrose transporters
CA2865014A CA2865014A1 (en) 2012-03-05 2013-03-05 Recombinant bacteria comprising novel sucrose transporters

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US13/412,193 2012-03-05
US13/412,193 US9017961B2 (en) 2012-03-05 2012-03-05 Recombinant bacteria comprising novel sucrose transporters

Publications (2)

Publication Number Publication Date
WO2013134174A2 WO2013134174A2 (en) 2013-09-12
WO2013134174A3 true WO2013134174A3 (en) 2013-12-27

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PCT/US2013/028970 Ceased WO2013134174A2 (en) 2012-03-05 2013-03-05 Recombinant bacteria comprising novel sucrose transporters

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US (3) US9017961B2 (en)
EP (1) EP2822960A2 (en)
JP (1) JP2015509379A (en)
KR (1) KR20140132392A (en)
CN (1) CN104302661A (en)
AU (1) AU2013230162A1 (en)
CA (1) CA2865014A1 (en)
IN (1) IN2014DN06652A (en)
SG (1) SG11201405338YA (en)
WO (1) WO2013134174A2 (en)

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US9688967B2 (en) 2014-12-05 2017-06-27 Synlogic, Inc. Bacteria engineered to treat diseases associated with hyperammonemia
WO2016183532A1 (en) * 2015-05-13 2016-11-17 Synlogic, Inc. Bacteria engineered to treat a disease or disorder
US11883439B2 (en) 2015-05-13 2024-01-30 Synlogic Operating Company, Inc. Bacteria engineered to treat a disease or disorder
ES2881384T3 (en) 2015-05-13 2021-11-29 Synlogic Operating Co Inc Engineered bacteria to reduce hyperphenylalaninemia
ES2925049T3 (en) 2015-11-16 2022-10-13 Synlogic Operating Co Inc Engineered bacteria to reduce hyperphenylalaninemia
CN107058205B (en) * 2017-06-05 2020-05-08 江南大学 Recombinant bacillus subtilis for producing sucrose phosphorylase and application thereof
CN111655841A (en) 2017-06-21 2020-09-11 同生运营公司 bacteria used to treat disorders
CN108070579A (en) * 2017-12-21 2018-05-25 中诺生物科技发展江苏有限公司 A kind of invertase industrialized preparing process
CN108504616B (en) * 2018-04-03 2020-05-29 广西科学院 A kind of recombinant clostridium beijerinckii efficiently fermenting sucrose and method for improving sucrose fermentation performance of clostridium beijerinckii
KR102201720B1 (en) * 2018-05-24 2021-01-12 한화솔루션 주식회사 Recombinant Corynebacterium Producing 1,3-PDO and Inhibited 3-HP Production and Method for Preparing 1,3-PDO Using Thereof
BR112022018571A2 (en) 2020-03-20 2022-11-01 Synlogic Operating Co Inc MICRO-ORGANISMS MANIPULATED TO REDUCE HYPERPHENYLALANINEMIA
CN117947025B (en) * 2023-11-07 2025-06-10 华南农业大学 Yellow beam wood sucrose transporter NcSUT gene promoter and application thereof
CN118086444B (en) * 2024-04-28 2024-06-28 山东德普新材料科技有限公司 Method for co-producing 1, 3-propanediol and 3-hydroxypropionic acid through fermentation

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DATABASE UniProt [online] 1 March 2003 (2003-03-01), "SubName: Full=Sucrose transport protein;", XP002713334, retrieved from EBI accession no. UNIPROT:Q8G7X9 Database accession no. Q8G7X9 *
DATABASE UniProt [online] 10 May 2005 (2005-05-10), "SubName: Full=Sugar transport protein;", XP002713332, retrieved from EBI accession no. UNIPROT:Q564C6 Database accession no. Q564C6 *
DATABASE UniProt [online] 22 February 2012 (2012-02-22), "SubName: Full=Oligosaccharide:H+ symporter;", XP002705617, retrieved from EBI accession no. UNIPROT:G9SK52 Database accession no. G9SK52 *
DATABASE UniProt [online] 23 January 2007 (2007-01-23), "SubName: Full=Sucrose transport protein;", XP002713335, retrieved from EBI accession no. UNIPROT:A1A2J7 Database accession no. A1A2J7 *
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DATABASE UniProt [online] 9 February 2010 (2010-02-09), "SubName: Full=Sucrose transport protein;", XP002713333, retrieved from EBI accession no. UNIPROT:D1NSR6 Database accession no. D1NSR6 *
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