WO2022133236A1 - Solid forms of a compound - Google Patents
Solid forms of a compound Download PDFInfo
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- WO2022133236A1 WO2022133236A1 PCT/US2021/064069 US2021064069W WO2022133236A1 WO 2022133236 A1 WO2022133236 A1 WO 2022133236A1 US 2021064069 W US2021064069 W US 2021064069W WO 2022133236 A1 WO2022133236 A1 WO 2022133236A1
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D271/00—Heterocyclic compounds containing five-membered rings having two nitrogen atoms and one oxygen atom as the only ring hetero atoms
- C07D271/02—Heterocyclic compounds containing five-membered rings having two nitrogen atoms and one oxygen atom as the only ring hetero atoms not condensed with other rings
- C07D271/10—1,3,4-Oxadiazoles; Hydrogenated 1,3,4-oxadiazoles
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D271/00—Heterocyclic compounds containing five-membered rings having two nitrogen atoms and one oxygen atom as the only ring hetero atoms
- C07D271/02—Heterocyclic compounds containing five-membered rings having two nitrogen atoms and one oxygen atom as the only ring hetero atoms not condensed with other rings
- C07D271/10—1,3,4-Oxadiazoles; Hydrogenated 1,3,4-oxadiazoles
- C07D271/113—1,3,4-Oxadiazoles; Hydrogenated 1,3,4-oxadiazoles with oxygen, sulfur or nitrogen atoms, directly attached to ring carbon atoms, the nitrogen atoms not forming part of a nitro radical
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K31/00—Medicinal preparations containing organic active ingredients
- A61K31/33—Heterocyclic compounds
- A61K31/395—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins
- A61K31/41—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having five-membered rings with two or more ring hetero atoms, at least one of which being nitrogen, e.g. tetrazole
- A61K31/4245—Oxadiazoles
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P25/00—Drugs for disorders of the nervous system
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P25/00—Drugs for disorders of the nervous system
- A61P25/28—Drugs for disorders of the nervous system for treating neurodegenerative disorders of the central nervous system, e.g. nootropic agents, cognition enhancers, drugs for treating Alzheimer's disease or other forms of dementia
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07B—GENERAL METHODS OF ORGANIC CHEMISTRY; APPARATUS THEREFOR
- C07B2200/00—Indexing scheme relating to specific properties of organic compounds
- C07B2200/13—Crystalline forms, e.g. polymorphs
Definitions
- the present disclosure relates generally to solid forms of compounds that modulate eukaryotic initiation factor 2B (EIF2B), pharmaceutical compositions thereof, therapeutic uses thereof, and processes for making the solid forms.
- EIF2B eukaryotic initiation factor 2B
- the present disclosure relates to small molecule modulators of eukaryotic initiation factor 2B (EIF2B) and their use as therapeutic agents, for example, in treating diseases such as Alzheimer’s disease, Parkinson’s disease, vanishing white matter disease, ALS, and frontotemporal dementia.
- EIF2B eukaryotic initiation factor 2B
- the present disclosure provides polymorphic and/or amorphous forms of Compound I (CAS Registry number 2278265-85-1) and salts, co-crystals, solvates, and hydrates thereof. Also described herein are processes for making the forms of Compound I, pharmaceutical compositions comprising forms of Compound I, and methods for using such forms and pharmaceutical compositions in the treatment of diseases mediated by EIF2B.
- FIG. 1 A is an X-ray powder diffractogram of Compound I Form A.
- FIG. IB is a long time X-ray powder diffractogram of Compound I Form A.
- FIG. 2 is a thermogravimetric analysis (TGA) (top line) and a differential scanning calorimeter (DSC) curve (bottom line) of Compound I Form A.
- TGA thermogravimetric analysis
- DSC differential scanning calorimeter
- FIG. 3 is a dynamic vapor sorption (DVS isotherm plot) of Compound I Form A.
- FIG. 4 is an X-ray powder diffractogram of Compound I Form B.
- FIG. 5A is an X-ray powder diffractogram of Compound I Form C.
- FIG. 5B is a long time X-ray powder diffractogram of Compound I Form C.
- FIG. 6 is a thermogravimetric analysis (TGA) (top line) and a differential scanning calorimeter (DSC) curve (bottom line) of Compound I Form C.
- TGA thermogravimetric analysis
- DSC differential scanning calorimeter
- FIG. 7 is a dynamic vapor sorption (DVS isotherm plot) of Compound I Form C.
- FIG. 8 is a heat-cool-heat differential scanning calorimeter (DSC) study of Compound I Form A. The bottom line represents DSC of Compound I Form D.
- FIG. 9 shows X-ray powder diffractograms of Compound I Form D, freshly made (bottom), and upon storage for 7 days under different conditions.
- FIG. 10A depicts a thermal ellipsoid (ORTEP) drawing of Compound I Form A, asymmetric unit molecule 1.
- FIG. 10B depicts a thermal ellipsoid (ORTEP) drawing of Compound I Form A, asymmetric unit molecule 2.
- FIG. 11 A shows thermal ellipsoid drawing of Compound I Form C asymmetric unit (Part 1 of the disorder in -OCF3).
- FIG. 1 IB shows thermal ellipsoid drawing of Compound I Form C asymmetric unit (Part 2 of the disorder in -OCF3).
- Compound I is a modulator of eukaryotic initiation factor 2B.
- the synthesis and method of use thereof is described in PCT International Application Publication No. WO 2019/032743 which is herein incorporated by reference in its entirety.
- the term “about” includes the indicated amount ⁇ 5%. In certain other embodiments, the term “about” includes the indicated amount ⁇ 2.5%. In certain other embodiments, the term “about” includes the indicated amount ⁇ 1%. Also, to the term “about X” includes description of “X”.
- Forms of Compound I or salts, co-crystals, solvates, or hydrates thereof are provided herein.
- reference to a form of Compound I or a salt, co-crystal, solvate, or hydrate thereof means that at least 50% to 99% (e.g., at least 50%, at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, or at least 99%) of Compound I or a salt, co-crystal, solvate, or hydrate thereof present in a composition is in the designated form.
- reference to Compound I Form A means that at least 50%, at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, at least 95%, or at least 99% of Compound I present in a composition is Form A.
- solid form refers to a type of solid-state material that includes amorphous as well as crystalline forms.
- crystalline form refers to polymorphs as well as solvates, hydrates, etc.
- polymorph refers to a particular crystal structure having particular physical properties such as X-ray diffraction, melting point, and the like.
- co-crystal refers to a molecular complex of a compound disclosed herein and one or more non-ionized co-crystal formers connected via non-covalent interactions.
- the co-crystals disclosed herein may include a non-ionized form of Compound I (e.g., Compound I free form) and one or more non-ionized co-crystal formers, where non-ionized Compound I and the co-crystal former (s) are connected through non-covalent interactions.
- co-crystals disclosed herein may include an ionized form of Compound I (e.g., a salt of Compound I) and one or more nonionized co-crystals formers, where ionized Compound I and the co-crystal former(s) are connected through non-covalent interactions.
- Co-crystals may additionally be present in anhydrous, solvated or hydrated forms.
- co-crystals may have improved properties as compared to the parent form (i.e., the free molecule, zwitterion, etc.) or a salt of the parent compound.
- Improved properties can be increased solubility, increased dissolution, increased bioavailability, increased dose response, decreased hygroscopicity, increased stability, a crystalline form of a normally amorphous compound, a crystalline form of a difficult to salt or unsaltable compound, decreased form diversity, more desired morphology, and the like.
- Methods for making and characterizing co-crystals are known to those of skill in the art.
- co-crystal former or “co-former” refers to one or more pharmaceutically acceptable bases or pharmaceutically acceptable acids disclosed herein in association with Compound I, or any other compound disclosed herein.
- solvate refers to a complex formed by combination of solvent molecules with molecules or ions of the solute.
- the solvent can be an organic compound, an inorganic compound, or a mixture of both.
- solvate includes a “hydrate” (z.e. , a complex formed by combination of water molecules with molecules or ions of the solute), hemi-hydrate, channel hydrate, etc.
- solvents include, but are not limited to, methanol, N,N-dimethylformamide, tetrahydrofuran, dimethylsulfoxide, and water.
- the solvated forms are equivalent to unsolvated forms and are encompassed within the scope of the present disclosure.
- desolvated refers to a Compound I form that is a solvate as described herein, and from which solvent molecules have been partially or completely removed.
- Desolvation techniques to produce desolvated forms include, without limitation, exposure of a Compound I form (solvate) to a vacuum, subjecting the solvate to elevated temperature, exposing the solvate to a stream of gas, such as air or nitrogen, or any combination thereof.
- a desolvated Compound I form can be anhydrous, i.e., completely without solvent molecules, or partially solvated wherein solvent molecules are present in stoichiometric or non-stoichiometric amounts.
- amorphous refers to a state in which the material lacks long range order at the molecular level and, depending upon temperature, may exhibit the physical properties of a solid or a liquid. Typically such materials do not give distinctive X-ray diffraction patterns and, while exhibiting the properties of a solid, are more formally described as a liquid. Upon heating, a change from solid to liquid properties occurs which is characterized by a change of state, typically second order (glass transition).
- any formula or structure given herein, including Compound I, is also intended to represent unlabeled forms as well as isotopically labeled forms of the compounds. It is understood that for any given atom, the isotopes may be present essentially in ratios according to their natural occurrence, or one or more particular atoms may be enhanced with respect to one or more isotopes using synthetic methods known to one skilled in the art.
- hydrogen includes for example 1 H, 2 H, 3 H; carbon includes for example n C, 12 C, 13 C, 14 C; oxygen includes for example 16 O, 17 O, 18 O; nitrogen includes for example 13 N, 14 N, 15 N; sulfur includes for example 32 S, 33 S, 34 S, 35 S, 36 S, 37 S, 38 S; fluoro includes for example 17 F, 18 F, 19 F; chloro includes for example 35 C1, 36 C1, 37 C1, 38 C1, 39 C1; and the like.
- the terms “treat,” “treating,” “therapy,” “therapies,” and like terms refer to the administration of material, e.g., any one or more solid, crystalline or polymorphs of Compound I as described herein in an amount effective to prevent, alleviate, or ameliorate one or more symptoms of a disease or condition, i.e., indication, and/or to prolong the survival of the subject being treated.
- administering refers to oral administration, administration as a suppository, topical contact, intravenous, intraperitoneal, intramuscular, intralesional, intranasal or subcutaneous administration, or the implantation of a slow-release device e.g., a mini-osmotic pump, to a subject.
- Administration is by any route, including parenteral and transmucosal (e.g., buccal, sublingual, palatal, gingival, nasal, vaginal, rectal, or transdermal).
- Parenteral administration includes, e.g., intravenous, intramuscular, intra-arteriole, intradermal, subcutaneous, intraperitoneal, intraventricular, and intracranial.
- Other modes of delivery include, but are not limited to, the use of liposomal formulations, intravenous infusion, transdermal patches, etc.
- the term “modulating” or “modulate” refers to an effect of altering a biological activity, especially a biological activity associated with a particular biomolecule such as EIF2B.
- an agonist or antagonist of a particular biomolecule modulates the activity of that biomolecule, e.g., EIF2B, by either increasing e.g. agonist, activator), or decreasing (e.g. antagonist, inhibitor) the activity of the biomolecule.
- Such activity is typically indicated in terms of an inhibitory concentration (IC50) or excitation concentration (EC50) of the compound for an inhibitor or activator, respectively, with respect to, for example, EIF2B.
- EIF2B mediated disease or condition refers to a disease or condition in which the biological function of EIF2B, including any mutations thereof, affects the development, course, and/or symptoms of the disease or condition, and/or in which modulation of EIF2B alters the development, course, and/or symptoms of the disease or condition.
- the EIF2B mediated disease or condition includes a disease or condition for which EIF2B modulation provides a therapeutic benefit, e.g. wherein treatment with compound(s), including one or more solid, crystalline or polymorphs of Compound I as described herein, provides a therapeutic benefit to the subject suffering from or at risk of the disease or condition.
- composition refers to a pharmaceutical preparation suitable for administration to an intended subject for therapeutic purposes that contains at least one pharmaceutically active compound, including any solid form thereof.
- the composition may include at least one pharmaceutically acceptable component to provide an improved formulation of the compound, such as a suitable carrier or excipient.
- High energy milling refers to the mechanical reduction, in a mill, of a solid to smaller nanoparticles. Examples of high energy milling or nano-milling include wet grinding, jet milling, fluidized bed jet milling, agitated bead milling, and ball milling. In some embodiments, high energy milling or nano-milling reduces the particle size to less than about 1 micron.
- the d90 for nano-milled material is less than about 900 nm, less than about 800 nm, less than about 700 nm, less than about 600 nm, less than about 500 nm, less than about 400 nm, less than about 300 nm, less than about 200 nm, or less than about 100 nm. In some embodiments the d90 for nano-milled material is less than about 100 nm. In some embodiments the d90 for nano-milled material is between 100 and 1 nm.
- D90 (or d90) means that 90% of the sample is smaller than the referenced size.
- the term “subject” or “patient” refers to a living organism that is treated with compounds as described herein, including, but not limited to, any mammal, such as a human, other primates, sports animals, animals of commercial interest such as cattle, farm animals such as horses, or pets such as dogs and cats.
- pharmaceutically acceptable indicates that the indicated material does not have properties that would cause a reasonably prudent medical practitioner to avoid administration of the material to a patient, taking into consideration the disease or conditions to be treated and the respective route of administration. For example, it is commonly required that such a material be essentially sterile, e.g., for injectables.
- the term “therapeutically effective” or “effective amount” indicates that the materials or amount of material is effective to prevent, alleviate, or ameliorate one or more symptoms of a disease or medical condition, and/or to prolong the survival of the subject being treated.
- the therapeutically effective amount will vary depending on the compound, the disorder or condition and its severity and the age, weight, etc., of the mammal to be treated.
- an effective amount is an amount sufficient to effectuate a beneficial or desired clinical result.
- the effective amounts can be provided all at once in a single administration or in fractional amounts that provide the effective amount in several administrations.
- the phrase “substantially shown in Figure” as applied to an X-ray powder diffractogram is meant to include a variation of ⁇ 0.2 °20 or ⁇ 0.1 °20, as applied to DSC thermograms is meant to include a variation of ⁇ 3 “Celsius, and as applied to thermogravimetric analysis (TGA) is meant to include a variation of ⁇ 2% in weight loss.
- “Substantially pure form (of a polymorph),” in some embodiments, means that in the referenced material, at least 99.9% of the material is the referenced polymorph. “Substantially pure form (of a polymorph),” in some embodiments, means that in the referenced material, at least 99.5% of the material is the referenced polymorph. “Substantially pure form (of a polymorph),” in some embodiments, means that in the referenced material, at least 99% of the material is the referenced polymorph. “Substantially pure form (of a polymorph),” in some embodiments, means that in the referenced material, at least 98% of the material is the referenced polymorph.
- “Substantially pure form (of a polymorph),” in some embodiments, means that in the referenced material, at least 97% of the material is the referenced polymorph. “Substantially pure form (of a polymorph),” in some embodiments, means that in the referenced material, at least 96% of the material is the referenced polymorph. “Substantially pure form (of a polymorph),” in some embodiments, means that in the referenced material, at least 95% of the material is the referenced polymorph.
- the term “contacting” means that the compound(s) are caused to be in sufficient proximity to a particular molecule, complex, cell, tissue, organism, or other specified material that potential binding interactions and/or chemical reaction between the compound and other specified material can occur.
- the present disclosure provides crystalline forms of the compound, 2-(4-chlorophenoxy)-N-[3-[5-[cis-3-(trifluoromethoxy)cyclobutyl]-l,3,4-oxadiazol-2-yl]-l- bicyclo[l.l.l]pent-l-yl]acetamide (hereinafter “compound” of “Compound I”), and salts, co-crystals, solvates, or hydrates thereof.
- Crystalline forms of Compound I and salts, co-crystals, solvates, or hydrates thereof, and other forms (e.g., amorphous forms) of Compound I and salts, co-crystals, solvates, or hydrates thereof are collectively referred to herein as “forms of Compound I.”
- Compound I is a free base. In some embodiments, Compound I is a salt or a co-crystal. In some embodiments, Compound I is a pharmaceutically acceptable salt or cocrystal. In some embodiments, Compound I is a solvate. In some embodiments, Compound I is a hydrate. In some embodiments, Compound I is an anhydrate.
- Compound I is an amorphous form.
- Compound I is crystalline and a Form A polymorph (hereinafter “Compound I Form A” or “Form A”) that exhibits an X-ray powder diffraction pattern (hereinafter XRPD or diffractogram) having characteristic peaks expressed in ⁇ 0.2 degrees 2-theta at 22.2, 22.6, and 22.9.
- XRPD X-ray powder diffraction pattern
- the X-ray powder diffraction pattern is made using CuKa radiation.
- the XRPD is obtained on a diffractometer using CuKa radiation at a wavelength of about 1.54 A.
- micronized Form A polymorph is provided herein.
- the Form A polymorph diffractogram further comprises one or more peaks expressed in ⁇ 0.2 degrees 2-theta selected from 17.8, 20.0, 20.8, and 21.0. In one embodiment, the Form A polymorph diffractogram further comprises two or more peaks expressed in ⁇ 0.2 degrees 2- theta selected from 17.8, 20.0, 20.8, 21.0 and 26.7. In one embodiment, the Form A polymorph diffractogram further comprises three or more peaks expressed in ⁇ 0.2 degrees 2-theta selected from: 15.9, 17.8, 19.5, 20.0, 20.8, 21.0, and 26.7. In one embodiment, the Form A polymorph diffractogram further comprises one or more peaks expressed in ⁇ 0.2 degrees 2-theta selected from 15.9, 17.8, 19.5, 20.0, 20.8, 21.0, 22.2, 22.6, 22.9, and 26.7.
- the compound is the Form A polymorph having an X-ray powder diffraction pattern substantially free of peaks at 16.4, 16.9, 18.5, 23.3, 25.1, and 25.8 ⁇ 0.05 degrees 2- theta.
- Compound I Form A is characterized by the X-ray powder diffractogram substantially as shown in FIG. 1.
- Compound I Form A is characterized by a differential scanning calorimetry (DSC) curve that comprises an endotherm at about 126.5 °C (onset temperature). In one embodiment, Compound I Form A is characterized by the DSC curve as substantially shown in FIG. 2 (bottom line).
- DSC differential scanning calorimetry
- Compound I Form A is characterized by a thermogravimetric analysis (TGA) thermogram showing a weight loss of about 0.08% up to about 150 °C. In one embodiment, Compound I Form A is characterized by the thermogram as substantially shown in FIG. 2 (top line).
- TGA thermogravimetric analysis
- Compound I Form A is characterized by a DVS Isotherm substantially as shown in FIG. 3. In one embodiment, Compound I Form A is an anhydrate. In one embodiment, Compound I Form A has an aqueous solubility of about 9.7 microgram/mL.
- a single crystal of Compound I Form A is in a monoclinic crystal system and P2i/c space group.
- Compound I Form A is characterized by one or more of the crystal structure parameters of Table 1.
- the Form A polymorph is a polymorph obtained by vacuum drying of a Form B polymorph described below.
- the Form A polymorph is produced by subjecting a solution of Compound I to diffusion of the vapor of a counter solvent at room temperature.
- Amorphous compound I may be dissolved, for instance in a solvent such as dimethylacetamide, and subjected to vapor diffusion of a counter solvent, e.g., vapor of a counter solvent such as water.
- a counter solvent e.g., vapor of a counter solvent such as water.
- Other solvent counter solvent pairs include and are not limited to heptane vapor diffused into a solution of Compound I in dichloromethane, or cyclohexane vapor diffusion into a solution of Compound I in 1 ,4-dioxane.
- Compound I is crystalline and a Form B polymorph (hereinafter “Compound I Form B”) that exhibits an X-ray powder diffraction pattern having characteristic peaks expressed in ⁇ 0.2 degrees 2-theta at 16.4 and 16.9.
- Compound I Form B a Form B polymorph
- the X-ray powder diffraction pattern is made using CuKal radiation.
- the XRPD is obtained on a diffractometer using CuKal radiation at a wavelength of about 1.54 A.
- the Form B diffractogram further comprises one or more peaks expressed in ⁇ 0.2 degrees 2-theta selected from at 19.2, and 22.6. In one embodiment, the Form B diffractogram further comprises two or more peaks expressed in ⁇ 0.2 degrees 2-theta selected from at 19.2, and 22.6. In one embodiment, the Form B diffractogram further comprises two or more peaks expressed in ⁇ 0.2 degrees 2-theta selected from at 19.2, and 22.6. In one embodiment, the Form B diffractogram further comprises two or more peaks expressed in ⁇ 0.2 degrees 2-theta selected from at
- the Form B diffractogram further comprises three or more peaks expressed in ⁇ 0.2 degrees 2-theta selected from 10.2, 13.6, 19.2, 22.2, 22.6, and 27.9. In one embodiment the Form B diffractogram further comprises one or more peaks expressed in ⁇ 0.2 degrees 2-theta selected from 10.2, 13.6, 16.4, 16.9, 19.2, 22.2, 22.6, and 27.9.
- the compound is the Form B polymorph having an X-ray powder diffraction pattern substantially free of peaks at 18.5, 22.9, 23.3, 25.1, and 25.8, ⁇ 0.05 degrees 2-theta.
- the Compound I Form B is characterized by the X-ray powder diffractogram substantially as shown in Figure 5.
- the Form B polymorph is a 1 ,4-dioxane solvate.
- the Form B polymorph upon vacuum drying, converts to Form A characterized by an X-ray powder diffractogram comprising peaks expressed in ⁇ 0.2 degrees 2-theta at:
- crystalline Compound I is a Form C polymorph (herein after “Compound I Form C”) that exhibits an X-ray powder diffraction pattern having characteristic peaks expressed in ⁇ 0.2 degrees 2-theta at 18.5, 23.3, 25.1, and 25.8.
- the X-ray powder diffraction pattern is made using CuKa radiation.
- the XRPD is obtained on a diffractometer using CuKa radiation at a wavelength of about 1.54 A.
- micronized Form C polymorph In one embodiment, provided herein is a micronized Form C polymorph.
- the Form C polymorph diffractogram further comprises one or more peaks expressed in ⁇ 0.2 degrees 2-theta selected from 17.3, 17.9, and 20.2. In one embodiment, the Form C polymorph diffractogram further comprises two or more peaks expressed in ⁇ 0.2 degrees 2-theta selected from 14.4, 17.3, 17.9, 20.2, and 20.6. In one embodiment, the Form C polymorph diffractogram further comprises three or more peaks expressed in ⁇ 0.2 degrees 2-theta selected from 14.4, 17.3, 17.9,
- the Form C polymorph diffractogram further comprises one or more peaks expressed in ⁇ 0.2 degrees 2-theta selected from 14.4, 17.3, 17.9, 18.5, 20.2, 20.6,
- the compound is the Form C polymorph having an X-ray powder diffraction pattern substantially free of peaks at 16.4, 16.9, 22.2, 22.6, and 22.9, ⁇ 0.05 degrees 2-theta.
- Compound I Form C is characterized by the X-ray powder diffractogram substantially as shown in Figure 6.
- Compound I Form C is characterized by a differential scanning calorimetry (DSC) curve that comprises an endotherm onset at about 132.3 °C.
- DSC differential scanning calorimetry
- Compound I Form C is characterized by a DSC curve substantially as shown in Figure 7.
- Compound I Form C is characterized by a DVS Isotherm substantially as shown in Figure 8.
- the Compound I Form C is an anhydrate. In one embodiment, the Compound I Form C has an aqueous solubility of about 1.02 micrograms/mL.
- a single crystal of Compound I Form C is in a monoclinic crystal system and P21/c space group.
- Compound I Form C is characterized by one or more of the crystal structure parameters of Table 2.
- Form C polymorph is produced by subjecting a Form A polymorph of 2- (4-chlorophenoxy)-N-[3-[5-[cis-3-(trifluoromethoxy)cyclobutyl]-l,3,4-oxadiazol-2-yl]-l- bicyclo[l.l.l]pent-l-yl]acetamide that exhibits an X-ray powder diffraction pattern having peaks expressed in ⁇ 0.2 degrees 2-theta at 22.2, 22.6, and 22.9, wherein the X-ray powder diffraction pattern is made using CuKa radiation, to high energy milling.
- Form A was subjected to 100 polymorph screening experiments including anti-solvent addition, solid vapor diffusion, liquid vapor diffusion, slurry, evaporation, slow cooling, polymer induced crystallization, grinding, and humidity induced phase transition; none of these experiments resulted in any other stable crystals including Form C.
- Form C was not obtained until Form A was subjected to nano-milling, a form of high energy milling, which is not a routine method for identifying polymorphic forms.
- Nano-milling requires specialized equipment including a milling chamber and specialized beads (e.g., beads of suitable hardness and size for nanomilling). In some embodiments, the beads are less than or equal to 0.8 mm in diameter.
- the beads are zirconia beads or yttria-stabilized zirconia beads.
- any crystalline compound described herein is in a substantially pure form.
- Form C polymorph is substantially pure.
- the present disclosure provides, in one embodiment, an amorphous form of 2-(4- chlorophenoxy)-A-[3-[5-[cA-3-(trifluoromethoxy)cyclobutyl]-l,3,4-oxadiazol-2-yl]-l- bicyclo[l.l.l]pentanyl]acetamide (“Compound I, Form D” or “Form D”).
- Compound I Form D is characterized by a glass transition temperature of about 27 °C (Compound I Form D) from a heat-cool-heat differential scanning calorimetry (DSC) cycle.
- Compound I Form D is characterized by a differential scanning calorimetry (DSC) curve that comprises an endotherm at about 26.8 °C (onset temperature). In one embodiment, Compound I Form D is characterized by DSC substantially as shown in FIG. 8 (bottom line).
- DSC differential scanning calorimetry
- Micronization of any form of Compound I is achieved using standard micronizing procedures, for instance, a jet mill. Particle size obtained after micronization depends on many factors such as the initial particle size, the number of passes through the micronizer, the feeder rate, the feed pressure, the mill pressure, and the like,
- micronized Compound I e.g., micronized Form A, micronized Form C
- micronized Compound I e.g., micronized Form A, micronized Form C
- Compound I (e.g., Form A, Form C), is nano-milled and has a d90 ⁇ 1 pm. In some embodiments, Compound I (e.g., Form A, Form C), is nano-milled and has a particle size distribution d90 ranging from about 1 pm to about 1 nm. In some embodiments, Compound I (e.g., Form A, Form C), is nano-milled and has a d90 ⁇ 0.5 pm (500 nm). In some embodiments, Compound I (e.g., Form A, Form C), is nano-milled and has a d90 ⁇ 0.1 pm (100 nm). In some embodiments, Compound I (e.g., Form A, Form C), is nano-milled and has a d90 ⁇ 0.01 pm (10 nm).
- compositions comprising one or more of the forms of Compound I described herein and one or more pharmaceutically acceptable vehicles such as carriers, adjuvants and excipients.
- suitable pharmaceutically acceptable vehicles may include, for example, inert solid diluents and fillers, diluents, including sterile aqueous solution and various organic solvents, permeation enhancers, solubilizers and adjuvants.
- Such compositions are prepared in a manner well known in the pharmaceutical art. See, e.g., Remington’s Pharmaceutical Sciences, Mace Publishing Co., Philadelphia, Pa. 17th Ed. (1985); and Modern Pharmaceutics, Marcel Dekker, Inc. 3rd Ed. (G.S. Banker & C.T. Rhodes, Eds.).
- the pharmaceutical compositions may be administered alone or in combination with other therapeutic agents.
- compositions comprising a therapeutically effective amount of a solid form of Compound I described herein.
- a pharmaceutical composition comprises a solid form selected from Compound I Form A, Compound I Form B, Compound I Form C, and Compound I Form D; and one or more pharmaceutically acceptable carriers.
- a pharmaceutical composition comprises Compound I, wherein at least 95% of Compound I is in a crystalline form as described herein.
- a pharmaceutical composition comprises Compound I, wherein at least 95% of Compound I is in an amorphous form as described herein.
- a pharmaceutical composition comprises Compound I, wherein at least 95% of Compound I is in Form A.
- a pharmaceutical composition comprises Compound I, wherein at least 95% of Compound I is in Form B.
- a pharmaceutical composition comprises Compound I, wherein at least 95% of Compound I is in Form C.
- a pharmaceutical composition comprises Compound I, wherein at least 95% of Compound I is Form D.
- a pharmaceutical composition comprises Compound I, wherein at least 97% of Compound I is in a crystalline form or an amorphous form as described herein. In one embodiment, a pharmaceutical composition comprises Compound I, wherein at least 97% of Compound I is in Form A. In one embodiment, a pharmaceutical composition comprises Compound I, wherein at least 97% of Compound I is in Form B. In one embodiment, a pharmaceutical composition comprises Compound I, wherein at least 97% of Compound I is in Form C. In one embodiment, a pharmaceutical composition comprises Compound I, wherein at least 97% of Compound I is in Form D.
- a pharmaceutical composition comprises Compound I, wherein at least 99% of Compound I is in a crystalline form as described herein. In one embodiment, a pharmaceutical composition comprises Compound I, wherein at least 99% of Compound I is in Form A. In one embodiment, a pharmaceutical composition comprises Compound I, wherein at least 99% of Compound I is in Form B. In one embodiment, a pharmaceutical composition comprises Compound I, wherein at least 99% of Compound I is in Form C. In one embodiment, a pharmaceutical composition comprises Compound I, wherein at least 99% of Compound I is in an amorphous form, i.e., Form D.
- a pharmaceutical composition comprises Compound I, wherein at least 99.5% of Compound I is in a crystalline form as described herein.
- a pharmaceutical composition comprises Compound I, wherein at least 99.5% of Compound I is in Form A.
- a pharmaceutical composition comprises Compound I, wherein at least 99.5% of Compound I is in Form B.
- a pharmaceutical composition comprises Compound I, wherein at least 99.5% of Compound I is in Form C.
- a pharmaceutical composition comprises Compound I, wherein at least 99.5% of Compound I is in an amorphous form, i.e., Form D.
- a pharmaceutical composition comprises Compound I, wherein at least 99.9% of Compound I is in a crystalline form as described herein.
- a pharmaceutical composition comprises Compound I, wherein at least 99.9% of Compound I is in Form A.
- a pharmaceutical composition comprises Compound I, wherein at least 99.9% of Compound I is in Form B.
- a pharmaceutical composition comprises Compound I, wherein at least 99.9% of Compound I is in Form C.
- a pharmaceutical composition comprises Compound I, wherein at least 99.9% of Compound I is in an amorphous form, i.e., Form D.
- compositions comprise pharmaceutically acceptable carriers or excipients, such as fillers, binders, disintegrants, glidants, lubricants, complexing agents, solubilizers, and surfactants, which may be chosen to facilitate administration of the compound by a particular route.
- carriers include calcium carbonate, calcium phosphate, various sugars such as lactose, glucose, or sucrose, types of starch, cellulose derivatives, gelatin, lipids, liposomes, nanoparticles, and the like.
- Carriers also include physiologically compatible liquids as solvents or for suspensions, including, for example, sterile solutions of water for injection (WFI), saline solution, dextrose solution, Hank’s solution, Ringer’s solution, vegetable oils, mineral oils, animal oils, polyethylene glycols, liquid paraffin, and the like.
- WFI water for injection
- Excipients may also include, for example, colloidal silicon dioxide, silica gel, talc, magnesium silicate, calcium silicate, sodium aluminosilicate, magnesium trisilicate, powdered cellulose, macrocrystalline cellulose, carboxymethyl cellulose, cross-linked sodium carboxymethylcellulose, sodium benzoate, calcium carbonate, magnesium carbonate, stearic acid, aluminum stearate, calcium stearate, magnesium stearate, zinc stearate, sodium stearyl fumarate, syloid, stearowet C, magnesium oxide, starch, sodium starch glycolate, glyceryl monostearate, glyceryl dibehenate, glyceryl palmitostearate, hydrogenated vegetable oil, hydrogenated cotton seed oil, castor seed oil mineral oil, polyethylene glycol (e.g.
- PEG 4000-8000 polyoxyethylene glycol
- poloxamers povidone
- crospovidone croscarmellose sodium
- alginic acid casein
- methacrylic acid divinylbenzene copolymer sodium docusate
- cyclodextrins e.g. 2-hydroxypropyl-.delta.-cyclodextrin
- polysorbates e.g.
- polysorbate 80 cetrimide
- TPGS d-alpha-tocopherol polyethylene glycol 1000 succinate
- magnesium lauryl sulfate sodium lauryl sulfate
- polyethylene glycol ethers di-fatty acid ester of polyethylene glycols
- a polyoxyalkylene sorbitan fatty acid ester e.g., polyoxyethylene sorbitan ester Tween®
- polyoxyethylene sorbitan fatty acid esters sorbitan fatty acid ester, e.g.
- a fatty acid such as oleic, stearic or palmitic acid
- mannitol xylitol
- sorbitol maltose
- lactose
- compositions may be presented in unit dose forms containing a predetermined amount of active ingredient per unit dose.
- a unit may contain, for example, 0.5 mg to 1 g, or 1 mg to 700 mg, or 5 mg to 100 mg of a compound of the present disclosure (as a free-acid, solvate (including hydrate) or salt, in any form), depending on the condition being treated, the route of administration, and the age, weight and condition of the patient.
- unit dosage formulations are those containing a daily dose, weekly dose, monthly dose, a sub-dose or an appropriate fraction thereof, of an active ingredient.
- such pharmaceutical formulations may be prepared by any of the methods well known in the pharmacy art.
- compositions that contain one or more of Compound I, and any of its forms as described herein, a pharmaceutically acceptable salt, stereoisomer, mixture of stereoisomers or prodrug thereof and one or more pharmaceutically acceptable vehicles selected from carriers, adjuvants and excipients.
- Suitable pharmaceutically acceptable vehicles may include, for example, inert solid diluents and fillers, diluents, including sterile aqueous solution and various organic solvents, permeation enhancers, solubilizers and adjuvants.
- Such compositions are prepared in a manner well known in the pharmaceutical art.
- the pharmaceutical compositions may be administered in either single or multiple doses.
- the pharmaceutical composition may be administered by various methods including, for example, rectal, buccal, intranasal and transdermal routes.
- the pharmaceutical composition may be administered by intra-arterial injection, intravenously, intraperitoneally, parenterally, intramuscularly, subcutaneously, orally, topically, or as an inhalant.
- Oral administration may be another route for administration of the compounds described herein. Administration may be via, for example, capsule or enteric coated tablets.
- the active ingredient is usually diluted by an excipient and/or enclosed within such a carrier that can be in the form of a capsule, sachet, paper or other container.
- the excipient serves as a diluent, it can be in the form of a solid, semi-solid, or liquid material, which acts as a vehicle, carrier or medium for the active ingredient.
- compositions can be in the form of tablets, pills, powders, lozenges, sachets, cachets, elixirs, suspensions, emulsions, solutions, syrups, aerosols (as a solid or in a liquid medium), ointments, soft and hard gelatin capsules, sterile injectable solutions, and sterile packaged powders.
- oral delivery may be achieved via stick packs.
- Stick packs provide a compact portable unit dose form suitable for powders/granules/gels.
- the components of a stick pack can be sprinkled onto or mixed with food or water.
- oral delivery may be achieved by use of sachets or pouches comprising powders/granules/gels which can be sprinkled onto or mixed with food or water.
- excipients include, e.g., lactose, dextrose, sucrose, sorbitol, mannitol, starches, gum acacia, calcium phosphate, alginates, tragacanth, gelatin, calcium silicate, microcrystalline cellulose, polyvinylpyrrolidone, cellulose, sterile water, syrup and methyl cellulose.
- the formulations can additionally include lubricating agents such as talc, magnesium stearate and mineral oil; wetting agents; emulsifying and suspending agents; preserving agents such as methyl and propylhydroxybenzoates; sweetening agents; and flavoring agents.
- compositions that include at least one of the forms of Compound I as described herein can be formulated so as to provide quick, sustained or delayed release of the active ingredient after administration to the subject by employing procedures known in the art.
- Controlled release drug delivery systems for oral administration include osmotic pump systems and dissolutional systems containing polymer-coated reservoirs or drug-polymer matrix formulations.
- Another formulation for use in the methods disclosed herein employ transdermal delivery devices (“patches”). Such transdermal patches may be used to provide continuous or discontinuous infusion of the compounds described herein in controlled amounts.
- the construction and use of transdermal patches for the delivery of pharmaceutical agents is well known in the art. Such patches may be constructed for continuous, pulsatile, or on demand delivery of pharmaceutical agents.
- the principal active ingredient may be mixed with a pharmaceutical excipient to form a solid preformulation composition containing a homogeneous mixture of Compound I, and any of its forms as described herein.
- a pharmaceutical excipient When referring to these preformulation compositions as homogeneous, the active ingredient may be dispersed evenly throughout the composition so that the composition may be readily subdivided into equally effective unit dosage forms such as tablets, pills and capsules.
- the tablets or pills of Compound I, and any of its forms as described herein, may be coated or otherwise compounded to provide a dosage form affording the advantage of prolonged action, or to protect from the acid conditions of the stomach.
- the tablet or pill can include an inner dosage and an outer dosage component, the latter being in the form of an envelope over the former.
- the two components can be separated by an enteric layer that serves to resist disintegration in the stomach and permit the inner component to pass intact into the duodenum or to be delayed in release.
- enteric layers or coatings such materials including a number of polymeric acids and mixtures of polymeric acids with such materials as shellac, cetyl alcohol and cellulose acetate.
- compositions for inhalation or insufflation may include solutions and suspensions in pharmaceutically acceptable, aqueous or organic solvents, or mixtures thereof, and powders.
- the liquid or solid compositions may contain suitable pharmaceutically acceptable excipients as described herein.
- the compositions are administered by the oral or nasal respiratory route for local or systemic effect.
- compositions in pharmaceutically acceptable solvents may be nebulized by use of inert gases. Nebulized solutions may be inhaled directly from the nebulizing device or the nebulizing device may be attached to a facemask tent, or intermittent positive pressure breathing machine. Solution, suspension, or powder compositions may be administered, in some embodiments orally or nasally, from devices that deliver the formulation in an appropriate manner.
- any composition described herein may further comprise a penetration enhancer.
- kits or containers that include a Compound I, and any of its forms as described herein, or any of the pharmaceutical compositions thereof described herein.
- the compound or composition is packaged, e.g., in a vial, bottle, flask, which may be further packaged, e.g., within a box, envelope, or bag; the compound or composition is approved by the U.S.
- kits or container disclosed herein may include written instructions for use and/or other indication that the compound or composition is suitable or approved for administration to a mammal, e.g., a human, for a bromodomain-mediated disease or condition; and the compound or composition may be packaged in unit dose or single dose form, e.g., single dose pills, capsules, or the like.
- the amounts of various compounds to be administered can be determined by standard procedures taking into account factors such as the compound activity (in vitro, e.g. the compound IC50 vs. target, or in vivo activity in animal efficacy models), pharmacokinetic results in animal models e.g. biological half-life or bioavailability), the age, size, and weight of the subject, and the disorder associated with the subject. The importance of these and other factors are well known to those of ordinary skill in the art. Generally, a dose will be in the range of about 0.01 to 50 mg/kg, also about 0.1 to 20 mg/kg of the subject being treated. Multiple doses may be used.
- a dosage may be expressed as a number of milligrams of a compound described herein per kilogram of the subject’s body weight (mg/kg). Dosages of between about 0.1 and 150 mg/kg may be appropriate. In some embodiments, about 0.1 and 100 mg/kg may be appropriate. In other embodiments a dosage of between 0.5 and 60 mg/kg may be appropriate.
- a dosage of from about 0.0001 to about 100 mg per kg of body weight per day, from about 0.001 to about 50 mg of compound per kg of body weight, or from about 0.01 to about 10 mg of compound per kg of body weight may be appropriate.
- body weight Normalizing according to the subject’s body weight is particularly useful when adjusting dosages between subjects of widely disparate size, such as occurs when using the drug in both children and adult humans or when converting an effective dosage in a non-human subject such as dog to a dosage suitable for a human subject.
- Eukaryotic initiation factor 2B functions as a guanine nucleotide exchange factor (GEF) that catalyzes the exchange of guanosine-5'-diphosphate (GDP) with guanosine-5'-triphosphate (GTP) on eukaryotic initiation factor 2, thereby allowing the GTP bound eukaryotic initiation factor 2 to bind to the initiating methionine transfer RNA and initiate protein synthesis.
- GEF guanine nucleotide exchange factor
- eukaryotic initiation factor 2B plays an important role in the integrated stress response (ISR) pathway. Activation of this pathway leads in part to ATF4 (Activating Transcription Factor 4) expression and stress granule formation. Aberrant ISR activation is found in multiple neurodegenerative diseases, with a strong functional link to pathology characterized by the RNA-binding/stress-granule protein TAR DNA binding protein (TARDBP), also known as TDP43. Activation of eIF2B inhibits the ISR and ISR dependent stress granule formation and is found to be neuroprotective in multiple disease models.
- ISR integrated stress response
- Impairment of eukaryotic initiation factor 2B activity is correlated to activation of the ISR pathway that is implicated in a variety of neurodegenerative diseases including Parkinson’s disease, amyotrophic lateral sclerosis (AES), Alzheimer’s disease, vanishing white matter disease (VWMD), and frontotemporal dementia.
- EIF2B Loss-of-function mutations in EIF2B that impair protein translation can cause progressive neurodegenerative syndromes.
- maladaptive PERK activation and EIF2B inhibition occur as part of the cellular response to an accumulation of misfolded proteins in the endoplasmic reticulum (Stutzbach L. D. et al., 2013, Acta Neuropathol Commun. Jul 6; 1 (1):31).
- the resulting deficit in protein synthesis contributes to synaptic dysfunction and memory impairment.
- EIF2B inhibition is also linked to stress granule formation and pathogenic protein aggregation.
- Compound I, and any of its forms as described herein can be used to treat cellular proliferative disorders, including both cancerous and non-cancerous cellular proliferative disorders. Treatment of cellular- proliferative disorders may comprise, but is not limited to, inhibiting cellular proliferation, including rapid proliferation. It is contemplated that Compound I, and any of its forms as described herein can be used to treat any type of cancer, including, but not limited to, carcinomas, sarcomas, lymphomas, leukemias and germ cell tumors.
- Exemplary cancers include, but are not limited to, adrenocortical carcinoma, anal cancer, appendix cancer, basal cell carcinoma, cholangiocarcinoma, bladder cancer, bone cancer, osteosarcoma or malignant fibrous histiocytoma, brain cancer (e.g., brain stem glioma, astrocytoma (e.g., cerebellar, cerebral, etc.), atypical teratoid/rhabdoid tumor, central nervous system embryonal tumors, malignant glioma, craniopharyngioma, ependymoblastoma, ependymoma, medulloblastoma, medulloepithelioma, pineal parenchymal tumors of intermediate differentiation, supratentorial primitive neuroectodermal tumors and/or pineoblastoma, visual pathway and/or hypothalamic glioma, brain and spinal cord tumors, etc.), breast cancer, bron
- noncancerous cellular proliferative disorders include, but are not limited to, fibroadenoma, adenoma, intraductal papilloma, nipple adenoma, adenosis, fibrocystic disease or changes of breast, plasma cell proliferative disorder (PCPD), restenosis, atherosclerosis, rheumatoid arthritis, myofibromatosis, fibrous hamartoma, granular lymphocyte proliferative disorders, benign hyperplasia of prostate, heavy chain diseases (HCDs), lymphoproliferative disorders, psoriasis, idiopathic pulmonary fibrosis, scleroderma, cirrhosis of the liver, IgA nephropathy, mesangial proliferative glomerulonephritis, membranoproliferative glomerulonephritis, hemangiomas, vascular and non-vascular intraocular proliferative
- Compound I and any of its forms as described herein can be used to treat lung injury and/or lung inflammation.
- Compound I and any of its forms as described herein can be used to treat cancer, pre-cancerous syndromes and diseases/injuries associated with activated unfolded protein response pathways, such as Alzheimer's disease, neuropathic pain, spinal cord injury, traumatic brain injury, ischemic stroke, stroke, Parkinson's disease, diabetes, metabolic syndrome, metabolic disorders, Huntington's disease, Creutzfeldt- Jakob Disease, fatal familial insomnia, Gerstmann-Straussler-Scheinker syndrome, and related prion diseases, amyotrophic lateral sclerosis, progressive supranuclear palsy, myocardial infarction, cardiovascular disease, inflammation, organ fibrosis, chronic and acute diseases of the liver, fatty liver disease, liver steatosis, liver fibrosis, chronic and acute diseases of the lung, lung fibrosis, chronic and acute diseases of the kidney, kidney fibrosis, chronic traumatic encephalopathy (CTE), neurodegeneration, dementias, frontotempo
- CTE chronic traumatic ence
- Compound I and any of its forms as described herein can be used to treat or lessen the severity of cancer, Alzheimer’s disease, stroke, Type 1 diabetes, Parkinson disease, Huntington's disease, amyotrophic lateral sclerosis, myocardial infarction, cardiovascular disease, atherosclerosis, arrhythmias, or age-related macular degeneration.
- Compound I and any of its forms as described herein can be used to treat neuropathic pain.
- the ocular disease includes vascular leakage (e.g., edema or neovascularization for any occlusive or inflammatory retinal vascular disease, such as rubeosis irides, neovascular glaucoma, pterygium, vascularized glaucoma filtering blebs, conjunctival papilloma), choroidal neovascularization (e.g., neovascular age-related macular degeneration (AMD), myopia, prior uveitis, trauma, or idiopathic), macular edema (e.g., post surgical macular edema, macular edema secondary to uveitis including retinal and/or choroidal inflammation, macular edema secondary to diabetes, and macular vascular leakage (e.g., edema or neovascularization for any occlusive or inflammatory retinal vascular disease, such as rubeosis irides
- the neovascular age-related macular degeneration is wet age- related macular degeneration.
- the neovascular age-related macular degeneration is dry age-related macular degeneration and the patient is characterized as being at increased risk of developing wet age-related macular degeneration.
- Compound I and any of its forms as described herein can be used to treat viral infections (e.g., to prevent the initiation of viral protein synthesis).
- viruses which can be treated using the compounds disclosed herein include, but are not limited to, picomaviridae (e.g., polio viruses), reoviridae (e.g., rotaviruses), togaviridae (e.g., encephalitis viruses, yellow fever virus, rubella virus, etc.), orthomyxoviridae (e.g., influenza viruses), paramyxoviridae (e.g., respiratory syncytial virus, measles virus, mumps virus, parainfluenza virus, etc.), rhabdoviridae (e.g., rabies virus), corona viridae, bunyaviridae, flaviviridae, filoviridae, arena viridae, bunyaviridae and retroviridae
- picomaviridae
- Compound I and any of its forms as described herein can be used to treat disorders associated with viral infections.
- disorders include, but are not limited to neurological symptoms (e.g., encephalitis, meningoencephalitis, paralysis, myelopathy, neuropathy, aseptic meningitis, hemiparesis, dementia, dysphagia, lack of muscular coordination, impaired vision, coma, etc.), wasting symptoms (e.g., inflammatory cell infiltration, perivascular cuffing of blood vessels, demyelination, necrosis, reactive gliosis, etc.), gastroenteritis symptoms (e.g., diarrhea, vomiting, cramps, etc.), hepatitis symptoms (nausea, vomiting, right upper quadrant pain, raised liver enzyme levels (e.g., AST, ALT, etc.), jaundice, etc.), hemorrhagic fever symptoms (e.g., headache, fever, chills body pains, diarrhea, vomiting, dizziness
- neurological symptoms e.g
- Compound I and any of its forms as described herein can be used to treat disorders characterized by unwanted synthesis and/or abnormal accumulation of one or more mutant and/or wild-type proteins. It is contemplated that the compounds disclosed herein that can inhibit translation initiation and thus can reduce the load on the protein-folding machinery and, accordingly, may reduce the severity of the disorder.
- disorders associated with unwanted synthesis and/or abnormal accumulation of one or more mutant and/or wild-type proteins include, but are not limited to, Tay-Sachs disease, cystic fibrosis, phenylketonuria, Fabry disease, Alzheimer's disease, Huntington's disease, Parkinson's disease, frontotemporal dementia, congophilic angiopathy, prion related disorders (i.e., transmissible spongiform encephalopathies such as Creutzfeldt- Jacob disease, kuru, fatal familial insomnia, scrapie, bovine spongiform encephalopathy, etc.), and the like.
- Compound I and any of its forms as described herein, and compositions disclosed herein, are capable of inhibiting neuronal cell death, such as in prion disease.
- the method includes administering a therapeutically effective amount of Compound I, and any of its forms as described herein or composition as described herein, to a patient in need of.
- the disorder is a neurodegenerative disease.
- neurodegenerative disease refers to a disease or condition in which the function of a subject's nervous system becomes impaired.
- Examples of neurodegenerative diseases include, e.g., Alexander’s disease, Alper’s disease, Alzheimer’s disease, Amyotrophic lateral sclerosis, Ataxia telangiectasia, Batten disease (also known as Spielmeyer-Vogt-Sjogren-Batten disease), Bovine spongiform encephalopathy (BSE), Canavan disease, Cockayne syndrome, Corticobasal degeneration, Creutzfeldt- Jakob disease, frontotemporal dementia, vanishing white matter disease, Gerstmann-Straussler-Scheinker syndrome, Huntington's disease, HIV-associated dementia, Kennedy’s disease, Krabbe’s disease, kuru, Lewy body dementia, Machado-Joseph disease (Spinocerebellar ataxia
- the presently disclosed Compound I and any of its forms as described herein for use in the treatment of Alzheimer’s disease, Parkinson’s disease, vanishing white matter disease, dementia, or ALS.
- the dementia is frontotemporal dementia.
- Compound I may be tested in the following assay.
- the ATF4 Nano Luciferase reporter was constructed by fusing the human full length 5’ untranslated region (5 ’-UTR) and a small portion of the coding sequence of the ATF4 gene upstream of the Nano Luciferase (NLuc) coding sequence lacking it’s start codon.
- nucleotides +1 through +364 (relative to the transcriptional start site) of ATF4 transcript variant 2 (NCBI NM_182810.2) flanked 5’ by EcoRI and 3’ by BamHI restriction enzyme sites were synthesized and cloned into the EcoRI/BamHI cloning sites of pLVX-EFla-IRES-Puro lentivirus vector (Clontech).
- Lentiviral particles were produced with Lenti-X single shots (VSV-G, Clontech) according to the manufacturer’s instructions and used to transduce a human H4 neuroglioma cell line (ATCC HTB-148).
- H4 cells were selected with 1.25 pg/mL Puromycin, and clonal cell lines generated by limiting dilution. We utilized this cell line to generate an integrated stress response (ISR) assay to evaluate the activity of ISR pathway inhibitors via luminescence readout.
- the H4 ATF4-NLuc (clone 17) cell line is plated at a density of 15,000 or 2,50 cells in 96-well or 384- well respectively in DMEM +10% fetal bovine serum. 24-hours later test compounds diluted in dimethyl sulfoxide (DMSO) are added for 30 minutes at 37 degree Celsius, followed by ISR pathway activation with 50um sodium arsenite aqueous solution for 6 additional hours.
- DMSO dimethyl sulfoxide
- Nano Gio luciferase reagent (N1150, Promega) is added according to manufacturer instructions and the luminescence signal (corresponding to the level of ATF4 translation and thus ISR pathway activation) is read with a standard plate reader with luminescence detection capabilities.
- Compound I demonstrates an IC50 of less than 1 pM in this assay.
- the present disclosure provides use of Compound I, and any of its forms as described herein, or any of the pharmaceutical compositions thereof described herein in the manufacture of a medicament for the treatment of a disease or condition as described herein.
- the present disclosure provides Compound I, and any of its forms as described herein, or any of the pharmaceutical compositions thereof described herein for use in treating a disease or condition as described herein.
- Standard XRPD patterns were collected using a Bruker D8 Advance diffractometer.
- the X- ray source is a Cu tube that was operated at 40 kV and 40 mA.
- the axial soller was 4.1° and the divergence slit was 0.6 mm.
- Powder samples were prepared on zero-background Si holders using manual light pressure to keep the sample surfaces flat. Each sample was analyzed from 3 to 45° 20 with an effective step size of 0.02° 20 and 0.2 s exposure time. For a long time XRPD measurement, conditions were different: the axial soller was 2.5°; the divergence slit was 0.2 mm; the step size was 0.01°; the exposure time was 6 s.
- TGA characterization was conducted on a TA Instruments Discovery 55.
- the instrument balance was calibrated using standard weights, and the temperature calibration was performed using nickel.
- the nitrogen purge was 40 mL per minute at the balance and 60 mL per minute at the furnace.
- Each sample was placed into a pre-tared platinum pan and heated from 25 °C to 300 °C at a rate of 10 °C/minute.
- DSC analyses were conducted on a TA Instruments Discovery 2500. Calibration of the instrument temperature and cell constant was performed using indium.
- the DSC cell was kept under a nitrogen purge of 60 mL per minute during each analysis.
- the sample was placed in a T zero hermetic pan with a pinhole and was heated from 25 °C to 250 °C at a rate of 10 °C/minute.
- DVS analysis was carried out using a Surface Measurement System DVS Intrinsic analyzer. The instrument was calibrated with standard weights. Approximately 15-20 mg of sample was loaded into a pan for analysis. The sample was analyzed at 25 °C in 10 % relative humidity (RH) steps from 0 to 95% RH (adsorption cycle) and from 95 to 0 % RH (desorption cycle). The movement from one step to the next occurred either after satisfying the equilibrium criterion of 0.002% weight change (dm/dt) or, if the equilibrium criterion was not met, after ten hours.
- RH relative humidity
- the resulting reaction mixture was heated to 100 oC overnight, cooled to rt and was diluted with sat. aq. NaHCO 3 solution (10 mL) and EtOAc (10 mL). The layers were separated, and the aqueous layer was extracted with EtOAc (3 x 10 mL). The combined organic layers were dried over anhydrous MgSO 4 , filtered, and concentrated under reduced pressure.
- the crude reaction mixture was purified employing reverse-phase prep-HPLC to deliver the desired product as a clear oil.
- the suspension was stirred for 12 hours at 20 °C.
- the filter cake was dried under vacuum at 50 °C for 12 h to give Form A (1.05kg).
- Form A can also be generated by alternative methods such as slow evaporation of a solution of Compound I in solvents including: MeOH, EtOH, IPA, IPAc, EtOAc, THF, MTBE, DCM, CHCl3, toluene, 2-MeTHF, and EtOAc/acetone (1:1), and/or any combinations thereof, anti-solvent addition, solid vapor diffusion, liquid vapor diffusion, slurry, evaporation, slow cooling, polymer induced crystallization, grinding and humidity induced phase transition, or other suitable techniques.
- solvents including: MeOH, EtOH, IPA, IPAc, EtOAc, THF, MTBE, DCM, CHCl3, toluene, 2-MeTHF, and EtOAc/acetone (1:1), and/or any combinations thereof, anti-solvent addition, solid vapor diffusion, liquid vapor diffusion, slurry, evaporation, slow cooling, polymer induced crystallization, grinding and humidity induced phase transition, or other suitable techniques
- Form D (amorphous) was dissolved in 0.1 mL of 2- methoxyethanol.
- the vial containing the as-prepared clear solution was placed in a larger vial containing water (water atmosphere) to allow vapor diffusion at room temperature which produced Form A solids.
- Form A could also be prepared from Form D via vapor-diffusion of heptane into Form D DCM solution or cyclohexane vapor-diffusion into Form D 1 ,4-dioxane solution.
- Compound I Form A was characterized by XRPD, DSC, TGA, Polarized Light Microscopy (PLM), DVS, and single-crystal X-ray diffraction.
- the XRPD was consistent with the theoretical XRPD calculated from the single-crystal X-ray diffraction experiment.
- TGA indicated low weight loss
- DSC indicated a single sharp melt at around 127 °C.
- DVS showed that Form A is non-hygroscopic with no form change after exposure to humidity.
- a suitable single crystal was selected from block-like crystals and analyzed by single-crystal X-ray diffractometer.
- the data were collected to a minimum diffraction angle (0) of 2.639° and a maximum diffraction angle (0) of 66.760°.
- the data set was 99.0 % complete, having a Mean I/o of 33.6 and D min (Cu) of 0.84 A.
- the calculated XRPD pattern was generated for Cu radiation using Mercury program and the atomic coordinates, space group, and unit cell parameters from the single crystal structure.
- a 1,4-dioxane solution of Form A was prepared by dissolving 20 mg in 0.2- 1.0 mL of 1,4- dioxane until clear solution was obtained. Then, water was added while maintaining magnetic agitation until precipitate appeared. Form B converted to Form A after vacuum drying at room temperature. XRPD data was obtained on the wet-cake prior to drying.
- FIG. 4 is an X-ray powder diffractogram of Compound I Form B.
- Form C could also be obtained by other methods in locations where Form C had been previously formed or in locations previously exposed to Form C.
- Form C was also observed to form under a variety of conditions including by slow evaporation of solutions of Compound I in MeOH, EtOH, nPrOH, IPA, acetone, MIBK, EtOAc, IP Ac, ethyl formate, butyl formate, 1,4-dioxane, diethylether, MTBE, 2-methoxyethanol, dimethoxyethane, acetonitrile, toluene, DCM, chloroform, and THF, and/or any combinations thereof, anti-solvent addition, solid vapor diffusion, liquid vapor diffusion, slurry, evaporation, slow cooling, polymer induced crystallization, grinding and humidity induced phase transition, or other suitable techniques.
- Form C was characterized by XRPD, single-crystal X-ray diffraction, TGA, DSC, PLM, and DVS.
- XRPD revealed a crystalline structure, and the calculated XRPD pattern was consistent with the experimental data.
- TGA indicated low-weight loss, and the DSC showed a single sharp melt at about 133 °C.
- DVS study showed there was no weight change and no polymorphic change after exposure to humidity.
- PLM showed rod-like particle morphology. The data are consistent with Form C existing as an anhydrate form.
- Form C crystals with high crystallinity were obtained after cooling the solution.
- the melting point of crystals prepared by cooling IPA/water solution is about 133.8 °C.
- the crystals obtained by this method are Form C with high crystallinity.
- One crystal having a size of 0.1 x 0.08 x 0.05 mm was used for SCXRD.
- SCXRD Single-crystal X-ray Diffractometry
- SCXRD were collected using a Rigaku SuperNova diffractometer.
- the X-ray source is a Cu tube, operated at 50 kV and 0.8 mA.
- a suitable single crystal was selected and mounted on a glass fiber. The crystal was kept at a steady temperature at 223 K during data collection. Data were measured using ⁇ scans of 1.0° per frame for 2.0/8.0 s. Preliminary examination and data collection were performed and analyzed with the CrysAlisPro software package. Cell parameters and an orientation matrix for data collection were retrieved and refined (least-squares refinement) by CrysAlisPro software using the setting angles of 8555 reflections in the range 4.3550° ⁇ 0 ⁇ 75.9450°.
- the data were collected to a minimum diffraction angle (0) of 4.37° and a maximum diffraction angle (0) of 76.05°.
- the final data completeness was 97.50 %, having a Mean I/ ⁇ of 20.3 and D min (Cu) of 0.79 A.
- Form A was kept in an oven at 150 °C until all solids melted. The melt was kept at 150 °C for 5 minutes and was then taken out of the oven and cooled to room temperature. Form D was stable for 7 days when stored at 5 °C but converted to Form C at RT-60 °C.
- Form D was characterized by XRPD and DSC.
- the XRPD trace (FIG. 9) revealed a characteristic amorphous halo with no significant diffraction peaks.
- DSC from a heat-cool-heat DSC cycle showed the glass transition temperature of Form D to be around 27 °C (FIG. 8). These data show that Form D is amorphous and non-crystalline.
- Forms A and C are stable anhydrous, crystalline forms, whereas Forms B and D are metastable forms.
- Form B can only be prepared in a location where Form C has rigorously been excluded, otherwise the conditions to prepare Form B (described above) will instead produce Form C, the most thermodynamically stable form identified. When Form C has been excluded, Form B desolvates to Form A upon vacuum drying.
- Form D will convert to Form C upon standing at room temperature or higher than room temperature (e.g., 25 °C - 50 °C) for several days.
- Form A slurry converts to Form C in the presence of Form C seed.
- Form A (10 mg) and Form C (10 mg) were stirred in saturated IPA/water and MeCN/water at temperatures ranging from 5-60 °C. After 6-8 days, the solids were analyzed by XRPD and DSC, and the results show that only Form C was present. These results indicate that Form C is thermodynamically more stable than Form A at temperatures of 5-60 °C.
- the reverse experiment was also performed and showed that Form C is the more stable form - i.e., Form A could not be obtained by seeding Compound I solutions with Form A in locations where Form C had been prepared. Form A could only be prepared in a location uncontaminated with Form C (e.g., locations where From C had not previously existed).
- Form A can be converted to Form C without seeding such as in a laboratory where Form C was previously produced.
- Form A 3 g
- Form A 3 g
- IPA:heptane 24 mL
- heptane 24 mL
- the resulting slurry was cooled to 0-5 °C and isolated by filtration.
- the resulting solids were found to be Form C by DSC analysis.
- Biorelevant media solubility of Forms A and C were studied in water, SGF, FaSSIF, and FeSSIF at 37 °C. 10-20 mg of Form A or C was weighed into 2-3 mL glass vials and media was added to achieve a solids loading of ⁇ 5 mg/mL. Each slurry was magnetically agitated at 750-1000 rpm at 37 °C, filtered via centrifugation, and the supernatant was analyzed by HPLC to determine solubility. In all cases, there was no polymorphic form change observed by XRPD analysis of the filtered solids. The results are summarized in Table 5 below. Form C solubility was lower than Form A. Form C also has a higher melt temperature indicating that Form C is thermodynamically favored over Form A.
- Forms A and C were stored under 25 °C/60% RH (open), 40 °C/75% RH (open), and 60 °C for up to 4 weeks. Samples were analyzed by XRPD, TGA, DSC, and HPLC purity. No form change, weight gain, or purity changes were observed for either Forms A or C solids as shown in Table 6 below.
- Example 9 Plasma pharmacokinetic (PK) study of Form A (micronized and unmicronized) compared to Form C (micronized) in monkeys
- Non-naive male cynomolgus monkeys were used in this study with at least a 7-day washout period prior to dosing. Animals were administered micronized Form A, unmicronized Form A, or micronized Form C powder in capsule by single oral administration at 15 mg/kg. The capsules were prepared according to the animals’ body weights on dosing day. Blood samples were collected at 0.25, 0.5, 1, 2, 4, 8, 24, 48, and 72 hours post-dose. Concentrations of Compound I in plasma samples were determined by LC/MS/MS and the data is provided in the table below.
- Micronized Form A and Form C provided comparable exposure and PK profiles in cynomolgus monkeys dosed at 15 mg/kg. Unmicronized Form A showed relatively lower AUC and C ma x compared to micronized Form A.
- Non-naive male cynomolgus monkeys were used in this study with at least a 7-day washout period prior to dosing. Animals were administered a nanosuspension of Form C as a single oral administration at 25 mg/kg. The nanosuspension was prepared by suspending nano-milled Form C in deionized water (5 mg/mL) to obtain an opaque homogenous suspension. Blood samples were collected at 0.25, 0.5, 1, 2, 4, 8, 24, 48, and 72 hours post-dose. Concentrations of Compound I in plasma samples were determined by LC/MS/MS.
- Form C is superior to Form A by having better stability while also having comparable systemic exposure (AUC and C max ).
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- Heterocyclic Carbon Compounds Containing A Hetero Ring Having Nitrogen And Oxygen As The Only Ring Hetero Atoms (AREA)
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Abstract
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Priority Applications (12)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| CN202180087980.1A CN116710427A (en) | 2020-12-18 | 2021-12-17 | solid form of the compound |
| IL303609A IL303609A (en) | 2020-12-18 | 2021-12-17 | solid forms of a compound |
| PE2023001881A PE20231440A1 (en) | 2020-12-18 | 2021-12-17 | SOLID FORMS OF A COMPOUND |
| CR20230254A CR20230254A (en) | 2020-12-18 | 2021-12-17 | Solid forms of a compound |
| MX2023007066A MX2023007066A (en) | 2020-12-18 | 2021-12-17 | Solid forms of a compound. |
| CA3205231A CA3205231A1 (en) | 2020-12-18 | 2021-12-17 | Solid forms of a compound |
| US18/268,144 US20240059662A1 (en) | 2020-12-18 | 2021-12-17 | Solid forms of a compound |
| EP21907909.2A EP4263488A4 (en) | 2020-12-18 | 2021-12-17 | SOLID FORMS OF A COMPOUND |
| JP2023536429A JP2024500101A (en) | 2020-12-18 | 2021-12-17 | solid form of a compound |
| AU2021400317A AU2021400317A1 (en) | 2020-12-18 | 2021-12-17 | Solid forms of a compound |
| KR1020237022100A KR20230121777A (en) | 2020-12-18 | 2021-12-17 | solid form of the compound |
| CONC2023/0007730A CO2023007730A2 (en) | 2020-12-18 | 2023-06-14 | solid forms of a compound |
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| Application Number | Priority Date | Filing Date | Title |
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| US202063127816P | 2020-12-18 | 2020-12-18 | |
| US63/127,816 | 2020-12-18 |
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| WO2022133236A1 true WO2022133236A1 (en) | 2022-06-23 |
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| PCT/US2021/064069 Ceased WO2022133236A1 (en) | 2020-12-18 | 2021-12-17 | Solid forms of a compound |
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| Country | Link |
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| US (1) | US20240059662A1 (en) |
| EP (1) | EP4263488A4 (en) |
| JP (1) | JP2024500101A (en) |
| KR (1) | KR20230121777A (en) |
| CN (1) | CN116710427A (en) |
| AU (1) | AU2021400317A1 (en) |
| CA (1) | CA3205231A1 (en) |
| CL (1) | CL2023001726A1 (en) |
| CO (1) | CO2023007730A2 (en) |
| CR (1) | CR20230254A (en) |
| IL (1) | IL303609A (en) |
| MX (1) | MX2023007066A (en) |
| PE (1) | PE20231440A1 (en) |
| TW (1) | TW202241857A (en) |
| WO (1) | WO2022133236A1 (en) |
Cited By (5)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US11851440B2 (en) | 2017-08-09 | 2023-12-26 | Denali Therapeutics Inc. | Modulators of eukaryotic initiation factor 2B, compositions and methods |
| WO2023250107A1 (en) * | 2022-06-23 | 2023-12-28 | Denali Therapeutics Inc. | Process for preparing modulators of eukaryotic initiation factor 2b |
| US11958840B2 (en) | 2019-02-13 | 2024-04-16 | Denali Therapeutics Inc. | Compounds, compositions and methods |
| US12091392B2 (en) | 2019-02-13 | 2024-09-17 | Denali Therapeutics Inc. | Compounds, compositions and methods |
| US12139478B2 (en) | 2017-09-01 | 2024-11-12 | Denali Therapeutics Inc. | Compounds, compositions and methods |
Citations (3)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| WO2019032743A1 (en) | 2017-08-09 | 2019-02-14 | Denali Therapeutics Inc. | Compounds, compositions and methods |
| WO2019183589A1 (en) * | 2018-03-23 | 2019-09-26 | Denali Therapeutics Inc. | Modulators of eukaryotic initiation factor 2 |
| WO2020168011A1 (en) * | 2019-02-13 | 2020-08-20 | Denali Therapeutics Inc. | Compounds, compositions and methods |
-
2021
- 2021-12-17 US US18/268,144 patent/US20240059662A1/en active Pending
- 2021-12-17 MX MX2023007066A patent/MX2023007066A/en unknown
- 2021-12-17 EP EP21907909.2A patent/EP4263488A4/en active Pending
- 2021-12-17 CN CN202180087980.1A patent/CN116710427A/en active Pending
- 2021-12-17 CR CR20230254A patent/CR20230254A/en unknown
- 2021-12-17 AU AU2021400317A patent/AU2021400317A1/en not_active Abandoned
- 2021-12-17 JP JP2023536429A patent/JP2024500101A/en active Pending
- 2021-12-17 KR KR1020237022100A patent/KR20230121777A/en not_active Withdrawn
- 2021-12-17 PE PE2023001881A patent/PE20231440A1/en unknown
- 2021-12-17 WO PCT/US2021/064069 patent/WO2022133236A1/en not_active Ceased
- 2021-12-17 TW TW110147461A patent/TW202241857A/en unknown
- 2021-12-17 IL IL303609A patent/IL303609A/en unknown
- 2021-12-17 CA CA3205231A patent/CA3205231A1/en active Pending
-
2023
- 2023-06-14 CO CONC2023/0007730A patent/CO2023007730A2/en unknown
- 2023-06-14 CL CL2023001726A patent/CL2023001726A1/en unknown
Patent Citations (3)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| WO2019032743A1 (en) | 2017-08-09 | 2019-02-14 | Denali Therapeutics Inc. | Compounds, compositions and methods |
| WO2019183589A1 (en) * | 2018-03-23 | 2019-09-26 | Denali Therapeutics Inc. | Modulators of eukaryotic initiation factor 2 |
| WO2020168011A1 (en) * | 2019-02-13 | 2020-08-20 | Denali Therapeutics Inc. | Compounds, compositions and methods |
Non-Patent Citations (4)
| Title |
|---|
| "Remington's Pharmaceutical Sciences", 1985, MACE PUBLISHING CO. |
| See also references of EP4263488A4 |
| SMITH H. L.MALLUCCI, G. R., BRAIN, vol. 139, 11 May 2016 (2016-05-11), pages 2113 - 21 |
| STUTZBACH L. D. ET AL., ACTA NEUROPATHOL COMMUN., vol. 1, no. 1, 2013, pages 31 |
Cited By (5)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US11851440B2 (en) | 2017-08-09 | 2023-12-26 | Denali Therapeutics Inc. | Modulators of eukaryotic initiation factor 2B, compositions and methods |
| US12139478B2 (en) | 2017-09-01 | 2024-11-12 | Denali Therapeutics Inc. | Compounds, compositions and methods |
| US11958840B2 (en) | 2019-02-13 | 2024-04-16 | Denali Therapeutics Inc. | Compounds, compositions and methods |
| US12091392B2 (en) | 2019-02-13 | 2024-09-17 | Denali Therapeutics Inc. | Compounds, compositions and methods |
| WO2023250107A1 (en) * | 2022-06-23 | 2023-12-28 | Denali Therapeutics Inc. | Process for preparing modulators of eukaryotic initiation factor 2b |
Also Published As
| Publication number | Publication date |
|---|---|
| CN116710427A (en) | 2023-09-05 |
| CL2023001726A1 (en) | 2024-01-26 |
| US20240059662A1 (en) | 2024-02-22 |
| CA3205231A1 (en) | 2022-06-23 |
| TW202241857A (en) | 2022-11-01 |
| JP2024500101A (en) | 2024-01-04 |
| MX2023007066A (en) | 2023-07-25 |
| EP4263488A1 (en) | 2023-10-25 |
| AU2021400317A1 (en) | 2023-07-06 |
| KR20230121777A (en) | 2023-08-21 |
| EP4263488A4 (en) | 2024-11-27 |
| CR20230254A (en) | 2023-07-26 |
| PE20231440A1 (en) | 2023-09-14 |
| IL303609A (en) | 2023-08-01 |
| CO2023007730A2 (en) | 2023-08-09 |
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