WO2022232931A1 - Catalytic tryptamine processes and precursors - Google Patents
Catalytic tryptamine processes and precursors Download PDFInfo
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- WO2022232931A1 WO2022232931A1 PCT/CA2022/050699 CA2022050699W WO2022232931A1 WO 2022232931 A1 WO2022232931 A1 WO 2022232931A1 CA 2022050699 W CA2022050699 W CA 2022050699W WO 2022232931 A1 WO2022232931 A1 WO 2022232931A1
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D209/00—Heterocyclic compounds containing five-membered rings, condensed with other rings, with one nitrogen atom as the only ring hetero atom
- C07D209/02—Heterocyclic compounds containing five-membered rings, condensed with other rings, with one nitrogen atom as the only ring hetero atom condensed with one carbocyclic ring
- C07D209/04—Indoles; Hydrogenated indoles
- C07D209/10—Indoles; Hydrogenated indoles with substituted hydrocarbon radicals attached to carbon atoms of the hetero ring
- C07D209/18—Radicals substituted by carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, e.g. ester or nitrile radicals
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D403/00—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group C07D401/00
- C07D403/02—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group C07D401/00 containing two hetero rings
- C07D403/04—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, not provided for by group C07D401/00 containing two hetero rings directly linked by a ring-member-to-ring-member bond
Definitions
- the present disclosure relates to the use of zinc amide enolate compounds for the preparation of tryptamines.
- the disclosure also relates to the use of catalysts and catalytic processes for the preparation of tryptamines using the zinc amide enolate compounds and tryptamine precursor compounds.
- Tryptamines are serotonin analogues, which can be described as derivatives of the indolamine metabolite of the amino acid tryptophan. Tryptamine itself (2-(3-indolyl)ethylamine) activates 5-HT4 receptors and regulates gastrointestinal mobility in humans (J.A. Jenkins etal. Nutrients 2016, 8, 56).
- the molecular structure of substituted tryptamines contains an indole ring connected to an amino group by an ethyl linker.
- the indole core, ethyl linker and amino group can be further modified with other substituents.
- the neurotransmitter serotonin (5-hydrotryptamine or 5-HT) and the sleep regulating hormone melatonin are well-known examples of substituted tryptamines (S. Young, J. Psychiatry Neurosci. 2007, 32, 394-399; R. Jockers et al. Br. J. Pharmacol. 2016, 173, 2702-2725).
- the tryptamine core is present in more complex compounds such as LSD, ibogaine, mitragynine, yohimbine, cipargamin, methysergide and flovatriptan.
- Tryptamine alkaloids are found in fungi, plants and animals. Some of these constitute traditional sources of medicines in various cultures or for neurological and psychotropic uses. These include N,N-dimethyltryptamine (DMT), 5-methoxy-N,N-dimethyltryptamine (5-MeO-DMT), bufotenin, psilocin and psilocybin (D.J. McKenna et al. J. Ethnopharmacol. 1984, 10, 195-223; J.J.H. Rucker et al. Neuropharmacology, 2018, 142, 200).
- DMT N,N-dimethyltryptamine
- 5-MeO-DMT 5-methoxy-N,N-dimethyltryptamine
- bufotenin psilocin and psilocybin
- Psilocybin is structurally related to other phosphorylated tryptamine natural products including norbaeocystin, baeocystin, and aeruginascin (J. Fricke et al. Angew. Chem., !nt. Ed. 2017, 56, 12352-12355).
- psilocybin On ingestion, psilocybin rapidly hydrolyses to psilocin, which is the pharmaceutically active ingredient (R.J. Dinis-Olivera Drug Metab. Rev. 2017, 49, 84) Natural and synthetic sources of these compounds and their analogues are used as psychedelic drugs.
- Tryptamines can be obtained from biological sources, biocatalytic processes and synthetic methods.
- Psilocin, psilocybin, DMT, 5-MeO-DMT and bufotenin can all be extracted from psychedelic mushrooms and plant sources.
- Such supplies rely on agricultural practices, which can be difficult and inconsistent.
- the yields are typically low (1-2% of biomass) and some compounds, such as psilocybin decomposes easily (D. Hoffmeisteretal. Chem. Eur. J. 2019, 25, 897-903).
- Biosynthetic production methods are currently being developed. These typically use enzymes extracted from mushroom, plant, or animal sources.
- There are several reports of advances using genetically modified yeasts and microbes, along with efforts to optimize and improve production yields using generational genetic optimization techniques A.M. Adams et al. Metabolic Engineering 2019, 56, 111-119).
- DMT, psilocin and 5-MeO-DMT can be prepared from the reaction of the respective indole with oxalyl chloride, followed by reaction with dimethylamine and reduction of the carbonyl functionalities with lithium aluminum hydride (M.E. Speeter and W.C. Anthony J. Am. Chem. Soc. 1954, 76, 6208-6210). Phosphorylation of psilocin is used to prepare psilocybin.
- Bufotenin can be derived from 5-O-benzyl-DMT by catalytic hydrogenolysis.
- the present disclosure in some aspects, describes a new approach to the synthesis of tryptamines that focuses on the use of commercially available and stable precursors that can be transformed into the desired tryptamine products and their phosphorylated derivatives.
- the invention relates to the use of zinc amide enolates and tryptamine precursors for the preparation of tryptamines and their derivatives using catalysts and catalytic processes.
- the zinc amide enolates and tryptamine precursors can be prepared and purified prior to transformation to the desired products.
- the indole precursors are air-stable and shelf-stable compounds that can be stored, transported and converted into the desired products on demand.
- the present invention relates to precursor compounds of Formula (I): wherein, Ri represents hydrogen, a linear or branched alkyl group of any length, possibly substituted, or an alkenyl group of any length, possibly substituted, or an alkynyl group, possibly substituted, or a cycloalkyl group, possibly substituted, or an aryl group, possibly substituted, or an heteroaryl group, possibly substituted, or an acyl group, possibly substituted, ora carbamate group, possibly substituted, or an OR c group or an NR C 2 group, possibly substituted, in which R c is a hydrogen atom or a cyclic, linear or branched alkyl, aryl or alkenyl group;
- LG represents any suitable leaving group, such as a halide group, sulphonate, or any other anionic leaving group
- R2 to R6 represent hydrogen, deuterium, a linear or branched alkyl group of any length, possibly substituted, or an alkenyl group of any length, possibly substituted, or an alkynyl group, possibly substituted, or a cycloalkyl group, possibly substituted, or an aryl group, possibly substituted, or an heteroaryl group, possibly substituted, or two adjacent or geminal groups are bonded together to form an optionally substituted ring, or an acyl group, possibly substituted, and one or more of the carbon atoms in the alkyl, alkenyl, alkynyl, cycloalkyl, aryl, heteroaryl or acyl groups of R2 to R6 is optionally replaced with a heteroatom selected from the group consisting of O, S, N, P and Si, which, where possible, is optionally substituted with one or more groups.
- the compounds of Formula (I) can be prepared and isolated prior to use.
- the compound of Formula (I) is achiral.
- the compound of Formula (I) is chiral.
- the present disclosure relates to zinc amide enolates of Formula (II): wherein, R7 to R10 represent hydrogen, deuterium, a linear or branched alkyl group of any length, possibly substituted, or an alkenyl group of any length, possibly substituted, or an alkynyl group, possibly substituted, or a cycloalkyl group, possibly substituted, or an aryl group, possibly substituted, or an heteroaryl group, possibly substituted, or two adjacent or geminal groups are bonded together to form an optionally substituted ring, or an acyl group, possibly substituted, and one or more of the carbon atoms in the alkyl, alkenyl, alkynyl, cycloalkyl, aryl, heteroaryl or acyl groups of R7 to R10 is optionally replaced with a heteroatom selected from the group consisting of O, S, N, P and Si, which,
- the compound of Formula (II) is achiral.
- the compound of Formula (II) is chiral.
- the present disclosure relates to the preparation of compounds of Formula (III): wherein, Ri represents hydrogen, a linear or branched alkyl group of any length, possibly substituted, or an alkenyl group of any length, possibly substituted, or an alkynyl group, possibly substituted, or a cycloalkyl group, possibly substituted, or an aryl group, possibly substituted, or an heteroaryl group, possibly substituted, or an acyl group, possibly substituted, ora carbamate group, possibly substituted, or an OR c group or an NR C 2 group, possibly substituted, in which R c is a hydrogen atom or a cyclic, linear or branched alkyl, aryl or alkenyl group;
- R2 to Rio represent hydrogen, deuterium, a linear or branched alkyl group of any length, possibly substituted, or an alkenyl group of any length, possibly substituted, or an alkynyl group, possibly substituted, or a cycloalkyl group, possibly substituted, or an aryl group, possibly substituted, or an heteroaryl group, possibly substituted, or two adjacent or geminal groups are bonded together to form an optionally substituted ring, or an acyl group, possibly substituted, and one or more of the carbon atoms in the alkyl, alkenyl, alkynyl, cycloalkyl, aryl, heteroaryl or acyl groups of R2 to R10 is optionally replaced with a heteroatom selected from the group consisting of O, S, N, P and Si, which, where possible, is optionally substituted with one or more groups.
- the compounds of Formula (III) can be prepared and isolated prior to use.
- the compound of Formula (III) is achiral. In another embodiment of the disclosure, the compound of Formula (III) is chiral.
- the present invention relates to the preparation of tryptamine compounds of Formula (IV): wherein,
- Ri represents hydrogen, a linear or branched alkyl group of any length, possibly substituted, or an alkenyl group of any length, possibly substituted, or an alkynyl group, possibly substituted, or a cycloalkyl group, possibly substituted, or an aryl group, possibly substituted, or an heteroaryl group, possibly substituted, or an acyl group, possibly substituted, ora carbamate group, possibly substituted, or an OR c group or an NR C 2 group, possibly substituted, in which R c is a hydrogen atom or a cyclic, linear or branched alkyl, aryl or alkenyl group;
- R2 to Rio represent hydrogen, deuterium, a linear or branched alkyl group of any length, possibly substituted, or an alkenyl group of any length, possibly substituted, or an alkynyl group, possibly substituted, or a cycloalkyl group, possibly substituted, or an aryl group, possibly substituted, or an heteroaryl group, possibly substituted, or two adjacent or geminal groups are bonded together to form an optionally substituted ring, or an acyl group, possibly substituted, and one or more of the carbon atoms in the alkyl, alkenyl, alkynyl, cycloalkyl, aryl, heteroaryl or acyl groups of R2 to R10 is optionally replaced with a heteroatom selected from the group consisting of O, S, N, P and Si, which, where possible, is optionally substituted with one or more groups; and R11 to Ri 2 represent hydrogen or deuterium.
- the compounds of Formula (IV) can be prepared and isolated prior to use.
- the compound of Formula (IV) is achiral.
- the compound of Formula (IV) is chiral.
- one or more of the carbon-12 atoms in the molecule are replaced with carbon-13.
- the transformations to which the compounds of the invention can be applied include but are not limited to catalytic and non-catalytic carbon-carbon bond forming Negishi reactions.
- Such carbon-carbon bond forming reactions include the use of compounds of the present disclosure to prepare tryptamine compounds.
- Scheme 1 illustrates the preparation of tert-Butyl 3-(2-(dimethylamino)- 2-oxoethyl)-5-methoxy-1 H-indole-1 -carboxylate, 2-(5-m ethoxy- 1 H-indol-3-yl)- N,N-dimethylethanamine (5-MeO-DMT) and 3-(2-(dimethylamino)ethyl)-1 H- indol-5-ol (bufotenin), according to the processes of this invention. This is shown as Figure 1.
- Figure 1 shows the scheme for the catalytic preparation of 5-MeO-DMT and bufotenin
- Figure 2 shows the X-ray crystal structure of tert-butyl 5-acetoxy-3- bromo-1 H-indole-1-carboxylate
- Figure 3 shows the X-ray crystal structure of tert-butyl 3-bromo-5- methoxy-1 H-indole-1 -carboxylate
- Figure 4 shows the X-ray crystal structure of tert-butyl 3-(2-
- Figure 5 shows the X-ray crystal structure of 2-(1 H-indol-3-yl)-N,N- diisopropylacetamide
- Figure 6 shows the X-ray crystal structure of 2-(1 H-indol-3-yl)-N,N- dimethylbutanamide
- Figure 7 shows the X-ray crystal structure of 4-(2-(1 H-indol-3- yl)ethyl)morpholine
- Figure 8 shows the 1 H NMR spectrum of tert-butyl 3-(2-(dimethylamino)- 2-oxoethyl)-1 H-indole-1 -carboxylate
- Figure 9 shows the 1 H NMR spectrum of 2-(1 H-indol-3-yl)-N,N- dimethylacetamide
- Figure 10 shows the 1 H NMR spectrum of tert-butyl 3-(1- (dimethylamino)-l -oxopropan-2-yl)-1 H-indole-1 -carboxylate;
- Figure 11 shows the 1 H NMR spectrum of 2-(1 H-indol-3-yl)-N,N- dimethylpropanamide
- Figure 12 shows the 1 H NMR spectrum of 2-(1 H-indol-3-yl)-N,N- dimethylbutanamide
- Figure 13 shows the 1 H NMR spectrum of 2-(5-methoxy-1 H-indol-3-yl)- N,N-dimethylacetamide;
- Figure 14 shows the 1 H NMR spectrum of 2-(4-methoxy-1 H-indol-3-yl)-
- Figure 15 shows the 1 H NMR spectrum of 2-(1 H-indol-3-yl)-N,N- diisopropylacetamide
- Figure 16 shows the 1 H NMR spectrum of N,N-diisopropyl-2-(5-methoxy- 1 H-indol-3-yl)acetamide
- Figure 17 shows the 1 H NMR spectrum of tert-butyl 3-(2-morpholino-2- oxoethyl)-1 H-indole-1 -carboxylate;
- Figure 18 shows the 1 H NMR spectrum of 2-(1 H-indol-3-yl)-1- morpholinoethanone;
- Figure 19 shows the 1 H NMR spectrum of 4-(2-(1 H-indol-3- yl)ethyl)morpholine
- Figure 20 shows the 1 H NMR spectrum of tert-butyl 5-methoxy-3-(2- morpholino-2-oxoethyl)-1 H-indole-1 -carboxylate;
- Figure 21 shows the 1 H NMR spectrum of 2-(5-methoxy-1 H-indol-3-yl)- 1 -morpholinoethanone
- Figure 22 shows the 1 H NMR spectrum of 4-(2-(5-methoxy-1 H-indol-3- yl)ethyl)morpholine.
- (Ci-Cp)-alkyl as used herein means straight and/or branched chain, saturated alkyl radicals containing one or more carbon atoms and includes (depending on the identity of “p”) methyl, ethyl, propyl, isopropyl, n- butyl, s-butyl, isobutyl, t-butyl, 2,2-dimethylbutyl, n-pentyl, 2-methylpentyl, 3- methylpentyl, 4-methylpentyl, n-hexyl and the like.
- (C2-C P )-alkenyl as used herein means straight and/or branched chain, unsaturated alkyl radicals containing two or more carbon atoms and one to three double bonds, and includes (depending on the identity of “p”) vinyl, allyl, 2-methylprop-1-enyl, but-1-enyl, but-2-enyl, but-3-enyl, 2- methylbut-1-enyl, 2-methylpent-1-enyl, 4-methylpent-1-enyl, 4-methylpent-2- enyl, 2-methylpent-2-enyl, 4-methylpenta-1 ,3-dienyl, hexen-1-yl and the like.
- (C2-C P )-alkynyl as used herein means straight and/or branched chain, unsaturated alkyl radicals containing two or more carbon atoms and one to three triple bonds, and includes (depending on the identity of “p”) ethynyl, propynyl, but-1-ynyl, but-2-ynyl, but-3-ynyl, 3-methylbut-1-enyl, 3- methylpent-1-ynyl, 4-methylpent-1-ynyl, 4-methylpent-2-ynyl, penta-1 ,3-di- ynyl, hexyn-1-yl and the like.
- (Ci-Cp)-alkoxy as used herein means straight and/or branched chain alkoxy group containing one or more carbon atoms and includes (depending on the identity of “p”) methoxy, ethoxy, propyloxy, isopropyloxy, t-butoxy, heptoxy, and the like.
- (C3-C P )-cycloalkyl as used herein means a monocyclic, bicyclic or tricyclic saturated carbocylic group containing three or more carbon atoms and includes (depending on the identity of “p”) cyclopropyl, cyclobutyl, cyclopentyl, cyclodecyl and the like.
- (C6-C P )-aryl as used herein means a monocyclic, bicyclic or tricyclic aromatic ring system containing at least one aromatic ring and 6 or more carbon atoms (and depending on the identity of “p”) and includes phenyl, naphthyl, anthracenyl, 1 ,2-dihydronaphthyl, 1 ,2,3,4-tetrahydronaphthyl, fluorenyl, indanyl, indenyl and the like.
- (C5-C P )-heteroaryl as used herein means a monocyclic, bicyclic or tricyclic ring system containing one or two aromatic rings and 5 or more atoms of which, unless otherwise specified, one, two, three, four or five are heteromoieties independently selected from N, NH, N(alkyl), O and S and depending on the value of “p” includes thienyl, furyl, pyrrolyl, pyrididyl, indolyl, quinolyl, isoquinolyl, tetrahydroquinolyl, benzofuryl, benzothienyl and the like.
- halo or “halogen” as used herein means chloro, fluoro, bromo or iodo.
- fluoro-substituted means that at least one, including all, of the hydrogens on the referenced group is replaced with fluorine.
- ring system refers to a carbon-containing ring system, that includes monocycles, fused bicyclic and polycyclic rings, bridged rings and metalocenes. Where specified, the carbons in the rings may be substituted or replaced with heteroatoms.
- leaving group refers to a group capable of being displaced from a compound when the compound undergoes reaction with a nucleophile.
- the term “comprising” and its derivatives, as used herein are intended to be open ended terms that specify the presence of the stated features, elements, components, groups, integers, and/or steps, but do not exclude the presence of other unstated features, elements, components, groups, integers and/or steps.
- the foregoing also applies to words having similar meanings such as the terms, “including”, “having” and their derivatives. For instance, “including” also encompasses “including but not limited to”.
- Ri represents hydrogen, a linear or branched alkyl group of any length, possibly substituted, or an alkenyl group of any length, possibly substituted, or an alkynyl group, possibly substituted, or a cycloalkyl group, possibly substituted, or an aryl group, possibly substituted, or an heteroaryl group, possibly substituted, or an acyl group, possibly substituted, or a carbamate group, possibly substituted, or an OR c group or an NR C 2 group, possibly substituted, in which R c is a hydrogen atom ora cyclic, linear or branched alkyl, aryl or alkenyl group;
- LG represents any suitable leaving group, such as a halide group, sulphonate, or any other anionic leaving group
- R2 to R6 represent hydrogen, deuterium, a linear or branched alkyl group of any length, possibly substituted, or an alkenyl group of any length, possibly substituted, or an alkynyl group, possibly substituted, or a cycloalkyl group, possibly substituted, or an aryl group, possibly substituted, or an heteroaryl group, possibly substituted, or two adjacent or geminal groups are bonded together to form an optionally substituted ring, or an acyl group, possibly substituted, and one or more of the carbon atoms in the alkyl, alkenyl, alkynyl, cycloalkyl, aryl, heteroaryl or acyl groups of R2 to R6 is optionally replaced with a heteroatom selected from the group consisting of O, S, N, P and Si, which, where possible, is optionally substituted with one or more groups.
- the compounds of Formula (I) can be prepared and isolated prior to use.
- the compound of Formula (I) is achiral.
- the compound of Formula (I) is chiral.
- Ri is a nitrogen protecting group such as a phosphinyl group, a phosphoryl group, a sulfenyl group, a sulfonyl group, or a silyl group (such as TMS, TIPS, TBDMS).
- a nitrogen protecting group such as a phosphinyl group, a phosphoryl group, a sulfenyl group, a sulfonyl group, or a silyl group (such as TMS, TIPS, TBDMS).
- LG represents any suitable leaving group, such as a halide group, sulphonate, or any other anionic leaving group.
- LG is chloro, bromo or iodo.
- LG is mesylate, triflate or tosylate.
- R2 to R6 represent hydrogen, deuterium, (OI-OQ)- alkyl, (C2-C6)-alkenyl, (C2-C6)-alkynyl, (C3-C7)-cycloalkyl, (Ce)-aryl, or (Cs-Ce)- heteroaryl.
- the present disclosure also relates to a tryptamine precursors of Formula (I), wherein one or more of the carbon-12 atoms are replaced with carbon-13.
- the present disclosure also relates to zinc amide enolates of Formula (II): wherein,
- R7 to R10 represent hydrogen, deuterium, a linear or branched alkyl group of any length, possibly substituted, or an alkenyl group of any length, possibly substituted, or an alkynyl group, possibly substituted, or a cycloalkyl group, possibly substituted, or an aryl group, possibly substituted, or an heteroaryl group, possibly substituted, or two adjacent or geminal groups are bonded together to form an optionally substituted 5-10-membered carboyclic or heterocyclic ring, or an acyl group, possibly substituted, and one or more of the carbon atoms in the alkyl, alkenyl, alkynyl, cycloalkyl, aryl, heteroaryl or acyl groups of R7 to R10 is optionally replaced with a heteroatom selected from the group consisting of O, S, N, P and Si, which, where possible, is optionally substituted with one or more groups.
- R7 to R10 represent hydrogen, deuterium, (OI-OQ)- alkyl, (C2-C6)-alkenyl, (C2-C6)-alkynyl, (C3-C7)-cycloalkyl, (Ce)-aryl, or (Cs-Ce)- heteroaryl.
- R7 and Re are joined together, along with the nitrogen atom to which they are attached, to form a 5-8-membered carbocyclic or heterocyclic ring.
- the compounds of Formula (II) can be prepared and isolated prior to use.
- the compound of Formula (II) is achiral.
- the compound of Formula (II) is chiral.
- Ri represents hydrogen, a linear or branched alkyl group of any length, possibly substituted, or an alkenyl group of any length, possibly substituted, or an alkynyl group, possibly substituted, or a cycloalkyl group, possibly substituted, or an aryl group, possibly substituted, or an heteroaryl group, possibly substituted, or an acyl group, possibly substituted, or a carbamate group, possibly substituted, or an OR c group or an NR C 2 group, possibly substituted, in which R c is a hydrogen atom ora cyclic, linear or branched alkyl, aryl or alkenyl group;
- R2 to Rio represent hydrogen, deuterium, a linear or branched alkyl group of any length, possibly substituted, or an alkenyl group of any length, possibly substituted, or an alkynyl group, possibly substituted, or a cycloalkyl group, possibly substituted, or an aryl group, possibly substituted, or an heteroaryl group, possibly substituted, or two adjacent or geminal groups are bonded together to form an optionally substituted ring, or an acyl group, possibly substituted, and one or more of the carbon atoms in the alkyl, alkenyl, alkynyl, cycloalkyl, aryl, heteroaryl or acyl groups of R2 to R10 is optionally replaced with a heteroatom selected from the group consisting of O, S, N, P and Si, which, where possible, is optionally substituted with one or more groups.
- R2 to R10 represent hydrogen, deuterium, (OI-OQ)- alkyl, (C2-C6)-alkenyl, (C2-C6)-alkynyl, (C3-C7)-cycloalkyl, (Ce)-aryl, or (Cs-Ce)- heteroaryl.
- the compounds of Formula (III) can be prepared and isolated prior to use.
- the compound of Formula (III) is achiral. In another embodiment of the disclosure, the compound of Formula (III) is chiral.
- Ri represents hydrogen, a linear or branched alkyl group of any length, possibly substituted, or an alkenyl group of any length, possibly substituted, or an alkynyl group, possibly substituted, or a cycloalkyl group, possibly substituted, or an aryl group, possibly substituted, or an heteroaryl group, possibly substituted, or an acyl group, possibly substituted, or a carbamate group, possibly substituted, or an OR c group or an NR C 2 group, possibly substituted, in which R c is a hydrogen atom ora cyclic, linear or branched alkyl, aryl or alkenyl group; R2 to Rio represent hydrogen, deuterium, a linear or branched alkyl group of any length, possibly substituted, or an alkenyl group of any length, possibly substituted, or an alkynyl group, possibly substituted, or a cycloalkyl group, possibly substituted, or an aryl group, possibly substituted, or an heteroaryl
- R11 to R12 represent hydrogen or deuterium.
- f3 ⁇ 4 to R10 represent hydrogen, deuterium, (C1-C6)- alkyl, (C2-Ce)-alkenyl, (C2-Ce)-alkynyl, (C3-C7)-cycloalkyl, (Ce)-aryl, or (Cs-Ce)- heteroaryl.
- the compounds of Formula (IV) can be prepared and isolated prior to use.
- the compound of Formula (IV) is achiral.
- the compound of Formula (IV) is chiral. In another embodiment, one or more of the carbon-12 atoms in the molecule are replaced with carbon-13.
- the present disclosure relates to compounds of Formula (V), Formula (VI), Formula (VII) and Formula (VIII):
- Ri represents hydrogen, a linear or branched alkyl group of any length, possibly substituted, or an alkenyl group of any length, possibly substituted, or an alkynyl group, possibly substituted, or a cycloalkyl group, possibly substituted, or an aryl group, possibly substituted, or an heteroaryl group, possibly substituted, or an acyl group, possibly substituted, or a carbamate group, possibly substituted, or an OR c group or an NR C 2 group, possibly substituted, in which R c is a hydrogen atom ora cyclic, linear or branched alkyl, aryl or alkenyl group;
- R2 to R10 represent hydrogen, deuterium, a linear or branched alkyl group of any length, possibly substituted, or an alkenyl group of any length, possibly substituted, or an alkynyl group, possibly substituted, or a cycloalkyl group, possibly substituted, or an aryl group, possibly substituted, or an heteroaryl group, possibly substituted, or two adjacent or geminal groups are bonded together to form an optionally substituted ring, or an acyl group, possibly substituted, and one or more of the carbon atoms in the alkyl, alkenyl, alkynyl, cycloalkyl, aryl, heteroaryl or acyl groups of R2 to R10 is optionally replaced with a heteroatom selected from the group consisting of O, S, N, P and Si, which, where possible, is optionally substituted with one or more groups.
- R2 to R10 represent hydrogen, deuterium, (OI-OQ)- alkyl, (C2-C6)-alkenyl, (C2-C6)-alkynyl, (C3-C7)-cycloalkyl, (Ce)-aryl, or (Cs-Ce)- heteroaryl
- the compounds of Formula (V), Formula (VI), Formula (VII) and Formula (VIII) are achiral.
- the compounds of Formula (V), Formula (VI), Formula (VII) and Formula (VIII) are chiral. In another embodiment, one or more of the carbon-12 atoms in the molecule are replaced with carbon-13.
- the present disclosure also relates to processes for the preparation of compounds of Formula (III): with a compound of Formula (II): in the presence of a suitable catalyst, wherein the variables R1-R10 and LG are as defined above.
- Suitable catalysts include but are not limited to transition metal salts and complexes, such as compounds of palladium, nickel, iron, ruthenium, cobalt, rhodium, iridium and copper.
- the catalysts are chiral and can facilitate asymmetric carbon-carbon bond forming reactions.
- the disclosure also relates to processes for the catalytic and non- catalytic conversion of compounds of Formula (III): to compounds of Formula (IV):
- Carbon-carbon bond forming reactions for the preparation of compounds of Formula (III) include but are not limited to catalytic and non-catalytic Negishi reactions.
- Reactions for the preparation of compounds of Formula (IV) include but are not limited to catalytic and non-catalytic reduction and hydrogenation reactions.
- Suitable reducing agents include borohydrides, borodeuterides, aluminohydrides, aluminodeuterides, silanes, boranes, hydrogen gas and deuterium gas.
- the catalytic system characterizing the process of the instant invention may comprise a base.
- said base can be any conventional base.
- non-limiting examples include: organic non-coordinating bases such as DBU, an alkaline or alkaline-earth metal carbonate, a carboxylate salt such as sodium or potassium acetate, or an alcoholate or hydroxide salt.
- Preferred bases are the alcoholate or hydroxide salts selected from the group consisting of the compounds of formula (RO)2l and ROM”, wherein M’ is an alkaline-earth metal, M” is an alkaline metal and R stands for hydrogen or a linear or branched alkyl group.
- the catalyst can be added to the reaction medium in a large range of concentrations.
- catalyst concentration values ranging from 0.001 % to 50 %, relative to the amount of substrate, thus representing respectively a substrate/catalyst (S/cat) ratio of 100,000 to 2.
- the complex concentration will be comprised between 0.01 % and 10 %, i.e. a S/cat ratio of 10,000 to 10 respectively.
- concentrations in the range of 0.1 to 5 %, corresponding to a S/cat ratio of 1000 to 20 respectively.
- useful quantities of base, added to the reaction mixture may be comprised in a relatively large range.
- non-limiting examples include: ranges between 1 to 100 molar equivalents relative to the substrate.
- base/substrate 1 to 3
- the catalytic reaction can be carried out in the presence or absence of a solvent.
- a solvent is required or used for practical reasons, then any solvent currently used in catalytic reactions can be used for the purposes of the invention.
- Non-limiting examples include aromatic solvents such as benzene, toluene or xylene, hydrocarbon solvents such as hexane or cyclohexane, ethers such as tetrahydrofuran, or yet primary or secondary alcohols, or water, or mixtures thereof.
- aromatic solvents such as benzene, toluene or xylene
- hydrocarbon solvents such as hexane or cyclohexane
- ethers such as tetrahydrofuran
- water or mixtures thereof.
- a person skilled in the art is well able to select the solvent most convenient in each case to optimize the catalytic reaction.
- the temperature at which the catalytic reaction can be carried out is comprised between -30 °C and 200 °C, more preferably in the range of between 0 °C and 100 °C.
- a person skilled in the art is also able to select the preferred temperature.
- Standard catalytic conditions typically implies the mixture of the substrate with the catalyst with or without a base, possibly in the presence of a solvent, and then treating such a mixture with the desired reactant at a chosen temperature in air or under an inert atmosphere of nitrogen or argon gas. Varying the reaction conditions, including for example, catalyst, temperature, solvent and reagent, to optimize the yield of the desired product would be well within the abilities of a person skilled in the art.
- Acetic anhydride (3.27 g, 32 mmol) was added slowly to a mixture of 4- hydroxyindole (3.88 g, 29 mmol) and triethylamine (4.4 g, 44 mmol) in dichloromethane (50 ml) at room temperature. The reaction was stirred for 3 hours, then water (30 ml) added. The phases were separated, and the aqueous layer was extracted with dichloromethane (2 x 15 ml). The combined organic layer was washed with water (50 ml), then brine (20 ml) and dried (MgSC ).
- Triethylamine (3.04 g, 30 mmol) was added to a solution of 4-(tert- butyldimethylsilyloxy)-1 H-indole (3.1 g, 12.5 mmol) in dichloromethane (20 ml) and di-tert-butyl decarbonate (3.27 g, 15 mmol) added, followed by DMAP (0.08 g, 0.65 mmol).
- the mixture was stirred for 24 hours with venting of the evolved gas through a bubbler.
- the reaction was evaporated to dryness and the residue was eluted through a pad of silica gel using hexanes/ether (7:1).
- Example 6 Preparation of tert-butyl 3-bromo-4-(tert- butyldimethylsilyloxy)-1 H-indole-1 -carboxylate
- NBS (0.282 g, 1.58 mmol) was added to a mixture of tert-butyl 4-(tert- butyldimethylsilyloxy)-1 H-indole-1 -carboxylate (0.5 g, 1.44 mmol) in dichloromethane (10 ml) and the reaction stirred overnight at room temperature. It was quenched with saturated NaHC03 solution (10 ml) and the phases separated. The aqueous layer was extracted with dichloromethane (2 x 10 ml) and the combined organic portion was washed water (10 ml), then dried over MgS04 and filtered.
- Boc Boc NBS (9.0 g, 50.6 mmol) was added to a mixture of tert-butyl 4-methoxy-1 H- indole-1-carboxylate (11.5 g, 46.5 mmol) and NFUCI (20 mg) in dichloromethane (200 ml), THF (10 ml) and DMF (4 drops) and the reaction stirred overnight at room temperature. It was quenched with saturated NaHCCb solution (100 ml) and the phases separated. The aqueous layer was extracted with dichloromethane (2 x 30 ml) and the combined organic portion was washed with brine (50 ml), then water (50 ml), then dried over MgSC and filtered.
- Acetic anhydride (4.4 g, 43 mmol) was added slowly to a mixture of 5- hydroxyindole (5.2 g, 39 mmol) and triethylamine (5.9 g, 58 mmol) in dichloromethane (50 ml) at room temperature. The reaction was stirred for 3 hours, then water (30 ml) added. The phases were separated, and the aqueous layer was extracted with dichloromethane (2 x 15 ml). The combined organic layer was washed with water (100 ml), then brine (20 ml) and dried (MgSC ).
- Figure 2 shows the X-ray crystal structure of tert-Butyl 5-acetoxy-3-bromo-1 H- indole-1 -carboxylate.
- Example 13 Preparation of tert-butyl 5-(tert-butyldimethylsilyloxy)-1H- indole-1 -carboxylate Triethylamine (3.04 g, 30 mmol) was added to a solution of 5-(tert- butyldimethylsilyloxy)-1 H-indole (3.1 g, 12.5 mmol) in dichloromethane (20 ml) and di-tert-butyl decarbonate (3.27 g, 15 mmol) added, followed by DMAP (0.08 g, 0.65 mmol). The mixture was stirred for 24 hours with venting of the evolved gas through a bubbler.
- NBS (0.282 g, 1.58 mmol) was added to a mixture of tert-butyl 5-(tert- butyldimethylsilyloxy)-1 H-indole-1 -carboxylate (0.5 g, 1.44 mmol) in dichloromethane (10 ml) and the reaction stirred overnight at room temperature. It was quenched with saturated NaHC03 solution (10 ml) and the phases separated. The aqueous layer was extracted with dichloromethane (2 x 10 ml) and the combined organic portion was washed water (10 ml), then dried over MgS04 and filtered.
- NBS (9.0 g, 50.6 mmol) was added to a mixture of tert-butyl 5-methoxy-1 H- indole-1-carboxylate (11.5 g, 46.5 mmol) and NFUCI (20 mg) in dichloromethane (200 ml), THF (10 ml) and DMF (4 drops) and the reaction stirred for one hour at room temperature. It was quenched with saturated NaHCCb solution (100 ml) and the phases separated. The aqueous layer was extracted with dichloromethane (2 x 30 ml) and the combined organic portion was washed with brine (50 ml), then water (50 ml), then dried over MgSC and filtered.
- Figure 3 shows the X-ray crystal structure of tert-butyl 3-bromo-5-methoxy-1 H- indole-1 -carboxylate.
- Example 18 Preparation of tert-butyl 3-bromo-1H-indole-1-carboxylate NBS (10.36 g, 58 mmol) was added to a mixture of tert-butyl 1 H-indole-1 - carboxylate (12.05 g, 55.4 mmol) and NhUCI (30 mg) in dichloromethane (150 ml) and the reaction stirred overnight at room temperature. Water (40 ml) was added, and the phases separated. The combined organic portion was washed with brine (30 ml), then water (20 ml), then dried over MgSC and filtered.
- Example 20 Preparation of 3-bromo-5-methoxy-1-tosyl-1H-indole A solution of NBS (0.30 g, 1.7 mmol) in dichloromethane (5 ml) was added dropwise to a mixture of 5-methoxy-1-tosyl-1 H-indole (0.50 g, 1.66 mmol) in dichloromethane (30 ml) at 0 °C. The reaction was stirred overnight at room temperature. Water (40 ml) was added, and the phases separated. The combined organic portion was washed with brine (30 ml), then water (20 ml), then dried over MgSC and filtered.
- Example 27 General procedure for the preparation of a-bromo amides A solution of the amine (99.1 mmol) in dichloromethane (100 ml) was added to a solution of 2-bromoacetyl bromide (49.5 mmol) in dichloromethane (50 ml) at -16 °C over 30 minutes and the reaction mixture stirred for another 30 minutes after the addition was completed. It was allowed to warm to room temperature and stirred for another one hour. Water (50 ml) was added, and the phases separated. The aqueous layer was extracted with dichloromethane (2 x 10 ml). The combined organic portion was washed with brine, dried over MgSC , filtered and the solvent removed under vacuum to yield the product.
- Example 28 General procedure for the preparation of zinc amide enolates
- Zinc granules (0.90 g, 13.76 mmol) were dried under vacuum while heating in a Schlenk flask, then refilled with argon. The flask was cooled to room temperature and a pinch of iodine was added while the flask was still warm.
- the a-bromo amide (12.53 mmol) was degassed with argon and dry THF (22 ml) added.
- the amide solution was added dropwise to the zinc at 0 °C with vigorous stirring. The mixture was allowed to warm to room temperature after the addition was completed and the stirring continued until all the amide reacted.
- the zinc amide enolates were used as a suspension in THF.
- Example 28(ii). (1-(Dimethylamino)-1-oxopropan-2-yl)zinc(ll) bromide
- Example 28(iii). (1-(Dimethylamino)-1-oxobutan-2-yl)zinc(ll) bromide
- Example 29. Catalyst screening for the Negishi coupling of tert-butyl 3- bromo-5-methoxy-1 H-indole-1 -carboxylate and (2-(dimethylamino)-2- oxoethyl)zinc(ll) bromide
- Figure 20 shows the 1 H NMR spectrum of tert-Butyl 5-methoxy-3-(2- morpholino-2-oxoethyl)-1 H-indole-1 -carboxylate.
- Example 30(vi) tert-Butyl 3-(2-(diethylamino)-2-oxoethyl)-5-methoxy-1H- indole-1 -carboxylate
- Figure 4 shows the X-ray crystal structure of tert-Butyl 3-(2-(diisopropylamino)- 2-oxoethyl)-5-methoxy-1 H-indole-1 -carboxylate.
- Figure 8 shows the 1 H NMR spectrum of tert-Butyl 3-(2-(dimethylamino)-2- oxoethyl)-1 H-indole-1 -carboxylate.
- Example 30(xiv) tert-Butyl 3-(1-(dimethylamino)-1-oxopropan-2-yl)-1H- indole-1 -carboxylate
- Figure 10 shows the 1 H NMR spectrum of tert-Butyl 3-(1-(dimethylamino)-1- oxopropan-2-yl)-1 H-indole-1 -carboxylate.
- Example 30(xv). tert-Butyl 3-(1-(dimethylamino)-1-oxobutan-2-yl)-1H- indole-1 -carboxylate
- Figure 17 shows the 1 H NMR spectrum of tert-Butyl 3-(2-morpholino-2- oxoethyl)-1 H-indole-1 -carboxylate.
- Example 30(xx) tert-Butyl 3-(2-(benzyl(methyl)amino)-2-oxoethyl)-1H- indole-1 -carboxylate
- Example 31 General procedure for the preparation of 2-(1H-indol-3-yl) acetamides A mixture of Cone. HCI (1 .0 ml) and methanol (2 ml) was added to the tert-butyl 3-(2-amino-2-oxoethyl)-1 H-indole-1-carboxylate (50 mg) and the mixture stirred for 12-24 hours at room temperature until the reaction was completed (TLC). The mixture was evaporated under reduced pressure and sodium carbonate solution added to the residue. The mixture was stirred for 10 minutes, then dichloromethane added, and the phases separated. The organic layer was dried over MgSC , then filtered and the solvent removed under reduced pressure. The residue was eluted through a silica gel pad. The eluent was evaporated to yield the crude product, which was purified by silica gel chromatography.
- Figure 13 shows the 1 H NMR spectrum of 2-(5-Methoxy-1 H-indol-3-yl)-N,N- dimethylacetamide.
- Figure 21 shows the 1 H NMR spectrum of 2-(5-Methoxy-1 H-indol-3-yl)-1- morpholinoethanone.
- Example 31 (vii) N,N-Diisopropyl-2-(5-methoxy-1 H-indol-3-yl)acetamide
- Figure 16 shows the 1 H NMR spectrum of N,N-Diisopropyl-2-(5-methoxy-1 H- indol-3-yl)acetamide.
- Example 31 (viii) N-Benzyl-2-(5-methoxy-1H-indol-3-yl)-N- methylacetamide
- Example 31 (ix) N,N-dibenzyl-2-(5-methoxy-1 H-indol-3-yl)acetamide
- Figure 9 shows the 1 H NMR spectrum of 2-(1 H-indol-3-yl)-N,N- dimethylacetamide.
- Figure 11 shows the 1 H NMR spectrum of 2-(1 H-indol-3-yl)-N,N- dimethylpropanamide.
- Figure 6 shows the X-ray crystal structure of 2-(1 H-indol-3-yl)-N,N- dimethylbutanamide.
- Figure 12 shows the 1 H NMR spectrum of 2-(1 H-indol-3-yl)-N,N- dimethylbutanamide.
- Example 31 (xvi). 2-(1 H-indol-3-yl)-1 -(pyrrolidin-1 -yl)ethanone
- Figure 18 shows the 1 H NMR spectrum of 2-(1 H-indol-3-yl)-1- morpholinoethanone.
- Figure 5 shows the X-ray crystal structure of 2-(1 H-indol-3-yl)-N,N- diisopropylacetamide.
- Figure 15 shows the 1 H NMR spectrum of 2-(1 H-indol-3-yl)-N,N- diisopropylacetamide.
- Figure 14 shows the 1 H NMR spectrum of 2-(4-m ethoxy- 1 H-indol-3-yl)-N,N- dimethylacetamide.
- Lithium aluminium hydride solution (1.0 ml of a 1.0 M solution in THF) was added to the 2-(1 H-indol-3-yl) acetamide (50 mg) in a Schlenk flask under argon and the mixture stirred for one hour. The solvent was removed, and ether (2 ml) added. Water (2 ml) was added dropwise at 0 °C and the resulting suspension stirred for 30 minutes. The phases were separated, and the ether layer was dried with MgSC , filtered and the solvent removed under reduced pressure to give the product.
- Figure 22 shows the 1 H NMR spectrum of 4-(2-(5-methoxy-1 H-indol-3- yl)ethyl)morpholine.
- Example 32(viii) 2-(5-methoxy-1H-indol-3-yl)-N,N-bis(methyl- d3)ethanamine
- Example 32(ix) 2-(5-methoxy-1H-indol-3-yl)-N,N-di(methyl-
- Figure 19 shows the 1 H NMR spectrum of 4-(2-(1 H-indol-3-yl)ethyl)morpholine.
- Example 32(xiv) 4-(2-(1H-indol-3-yl)ethyl)morpholine-d8
- Example 32(xv) 2-(4-methoxy-1 H-indol-3-yl)-N,N-dimethylethanamine
- Lithium aluminium deuteride solution (1.0 ml of a 1.0 M solution in THF) was added to the 2-(1 H-indol-3-yl) acetamide (50 mg) in a Schlenk flask under argon and the mixture stirred for one hour. The solvent was removed, and ether (2 ml) added. Water (2 ml) was added dropwise at 0 °C and the resulting suspension stirred for 30 minutes. The phases were separated, and the ether layer was dried with MgSC , filtered and the solvent removed under reduced pressure to give the product.
- Example 33(x) 2-(4-methoxy-1 H-indol-3-yl)-N,N-dimethylbutan-1 -amine- 1,1 -d 2
- Example 33(xi) 4-methoxy-3-(2-(pyrrolidin-1 -yl)ethyl-2,2-d2)-1 H-indole
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| IL308184A IL308184A (en) | 2021-05-05 | 2022-05-04 | Catalytic tryptamine processes and precursors |
| US18/558,674 US20240254081A1 (en) | 2021-05-05 | 2022-05-04 | Catalytic tryptamine processes and precursors |
| CN202280047871.1A CN117597329A (en) | 2021-05-05 | 2022-05-04 | Catalytic tryptamine methods and precursors |
| JP2023567195A JP2024516279A (en) | 2021-05-05 | 2022-05-04 | Catalytic tryptamine processes and precursors |
| CA3217559A CA3217559A1 (en) | 2021-05-05 | 2022-05-04 | Catalytic tryptamine processes and precursors |
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| US12239632B2 (en) | 2021-09-03 | 2025-03-04 | Alexander Shulgin Research Institute, Inc. | Asymmetric allyl tryptamines |
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