WO2024031643A1 - 基于偏振多参量融合的ps-oct可视度提升方法及系统 - Google Patents
基于偏振多参量融合的ps-oct可视度提升方法及系统 Download PDFInfo
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Definitions
- the invention relates to the technical field of optical coherence tomography, and in particular to a PS-OCT visibility improvement method and system based on polarization multi-parameter fusion.
- Optical coherence tomography is currently recognized as the highest resolution imaging method in the field of intracavity imaging.
- OCT optical coherence tomography
- the traditional OCT system based on tissue intensity imaging has shortcomings in analyzing tissue characteristics, which makes artificial or When AI analyzes images, it will be difficult to distinguish different biological tissues such as different membrane structures and plaques.
- the image expression results obtained by the intensity OCT currently used clinically are blurred.
- light carries other additional characteristics.
- the additional characteristics carried by light can be used to analyze or quantitatively measure different tissues to improve visibility.
- the principle of polarization-sensitive OCT (PS-OCT) is based on this.
- Various biological tissues or samples can achieve polarization modulation of the input light, change the polarization state of the input light, and obtain additional ways to characterize the visibility of biological tissues or samples. Obtain feature information other than intensity.
- PS-OCT technology is based on the propagation and reflection of polarized light incident on the sample tissue through the sample medium, causing the polarization state of the input polarized light to change.
- the polarization characteristics of the sample can be obtained information to achieve depth-resolved imaging of tissue birefringence.
- This special property is particularly important in samples or biological tissues. Proteins or biological macromolecules with isotropic tissue structures in blood vessels can change the polarization state of incident light, such as collagen and actin. Inducing shape birefringence and producing a measurable optical signal.
- the polarization information of the sample at depth resolution can be obtained, such as phase retardation and optical axis orientation.
- the purpose of the present invention is to provide a PS-OCT visibility improvement method and system based on polarization multi-parameter fusion to achieve color images of different tissue structures of samples, more intuitively help doctors make diagnosis, and reduce the cost of existing intracavity The difficulty of learning imaging products.
- the present invention provides a PS-OCT visibility improvement method based on polarization multi-parameter fusion, which includes the following steps:
- the preprocessing includes the following steps:
- the fusion formula is as follows:
- Stru total is the fused image
- pH 1 and pH 2 are the upper and lower images of the H channel respectively
- pV 1 and pV 2 are the upper and lower images of the V channel respectively.
- the polarization state image adopts the following method:
- the Stokes matrix is normalized to form a QUV three-dimensional array.
- the contour of the sample to be tested is used to filter the QUV three-dimensional array.
- the pixels outside the contour are set to 0, and the QUV three-dimensional array is drawn in RGB to obtain the test sample.
- the Poincaré sphere is used to extract the spatial subnormal vector Bn of the PS-OCT image plane, and the second and third dimensions of Bn are swapped to obtain an x*y*3 matrix, where x and y represent the number of rows of image pixels. and the number of columns; after filtering the contour of the sample to be tested, the optical axis image is obtained.
- the local phase delay is calculated using the following formula:
- ⁇ n is the local phase delay
- N n is the normal vector in the nth intimate plane
- N n-1 is the normal vector of the n-1th intimate plane.
- the local optical axis image is calculated using the following formula:
- a n R n-1 (- ⁇ n-1 ; A n-1 )R n-2 (- ⁇ n-2 ; A n-2 )...R 1 (- ⁇ 1 ; A 1 )B n
- a n is the local optical axis
- B n represents the optical axis superimposed with the birefringence effect of tissues at different depths
- R n is the 3*3 rotation matrix from the n-1th optical axis to the nth optical axis
- ⁇ n is The phase retardation of the nth close plane
- a n (x), A n (y), and A n (z) are respectively the three dimensions of the local optical axis An of the three-dimensional array.
- the average gradient fusion of multiple images includes the following method:
- the polarization state image, the local optical axis image and the local phase delay image are normalized; the gradient features and adjustable fusion weight coefficients are used to fuse the three image calculation results.
- the weighted fusion of multiple images includes the following methods:
- d i is the fusion coefficient
- d 1 0.4
- d 2 0.2
- d 3 0.4
- Fusimage i represents the image after grayscale feature fusion, shape feature fusion and texture feature fusion
- the grayscale feature fusion includes the following process:
- grayscale feature values from grayscale images, where the grayscale feature values include mean, variance, energy, slope, and kurtosis;
- the fused five grayscale feature value fused images are fused again to finally become one grayscale fused image.
- the shape feature fusion includes: extracting shape features from three types of grayscale images and normalizing the central moments; obtaining 7 invariant moment shape features, and combining the 7 shapes
- the features are used as shape feature vectors to form a shape feature matrix, and the shape feature matrix is used for shape fusion to obtain a shape fusion image.
- the texture feature fusion includes: extracting texture features from three types of grayscale images, where the texture features include: energy, entropy, contrast and correlation; using texture features to construct a texture feature vector, and The three types of grayscale images are fused according to the constructed four types of texture feature vectors; four types of texture feature images are formed, and then the four types of texture feature images are fused according to equal weights to form a texture fusion image.
- the present invention also provides a PS-OCT visibility improvement system based on polarization multi-parameter fusion, which is used to implement the above-mentioned PS-OCT visibility improvement method based on polarization multi-parameter fusion, including an image acquisition module, an image processing module and an image Fusion module;
- the image acquisition module is used to acquire the original PS-OCT image, preprocess the original PS-OCT image, and obtain the outline of the sample to be tested;
- the image processing module is used to use the contour of the sample to be tested to filter the QUV three-dimensional array constructed based on the Stokes matrix to obtain a polarization state image. Based on the calculated polarization state, the Poincaré sphere is used to calculate the local optical axis image. and local phase delay images;
- the image fusion module is used to perform average gradient fusion or weighted fusion on the multiple images obtained above, and obtain the final PS-OCT image after fusion.
- the PS-OCT visibility improvement method and system provided by this application based on polarization multi-parameter fusion requires only a single input polarization state when acquiring PS-OCT, and does not require mutually coherent polarization inputs, which increases the complexity of the system. Less demanding. It has a wide range of applications and can be used for both endoscope-based PSOCT and galvanometer-based planar scanning PSOCT.
- the PS-OCT visibility improvement method and system based on polarization multi-parameter fusion uses multiple methods to resolve and fuse polarization information, which has better visibility than the existing technology.
- Figure 1 is a flow chart of the PS-OCT visibility improvement method based on polarization multi-parameter fusion provided by the present invention.
- Figure 2 is a schematic diagram of the PS-OCT image interface in the PS-OCT visibility improvement method based on polarization multi-parameter fusion provided by the present invention.
- Figure 3 is a schematic diagram of the Poincaré sphere of the PS-OCT visibility improvement method based on polarization multi-parameter fusion provided by the present invention.
- Figure 4 is a schematic diagram of the local optical axis of the PS-OCT visibility improvement method based on polarization multi-parameter fusion provided by the present invention
- Figure 5 is a schematic structural diagram of the PS-OCT visibility improvement system based on polarization multi-parameter fusion provided by the present invention.
- an embodiment of the present invention provides a PS-OCT visibility improvement method based on polarization multi-parameter fusion, which includes the following steps:
- the preprocessing process includes the following steps
- Stru total is the fused image
- pH 1 and pH 2 are the upper and lower images of the H channel respectively
- pV 1 and pV 2 are the upper and lower images of the V channel respectively.
- the system collects two orthogonal polarization A-scan data H and V, subtracts the reference plane, multiplies it by a cosine cone window for shaping, adds dispersion compensation, and then performs FFT to obtain H and the Fourier domain IMG_H and IMG_V of the V channel. They are complex matrices of x*y*4. Therefore, when displayed as an image, their absolute values are taken and averaged along the third dimension to obtain the original image. Because the birefringence effect of polarization produces phase delay, both the H and V channels have two upper and lower images, a total of 4 images, as shown in Figure 2:
- the fusion of these four images can obtain the structural diagram of the sample to be tested.
- the fusion formula is as follows:
- pH1, pH2, pV1 and pV2 are the upper and lower images of H and V channels respectively. It also includes setting the brightness threshold Thr. Pixels whose Stru total is lower than the threshold are regarded as noise, and the contour Msk_Thr of the sample to be tested is obtained. At this point, the data preprocessing is completed.
- the polarization state image adopts the following method:
- the Stokes matrix is normalized to form a QUV three-dimensional array.
- the contour of the sample to be tested is used to filter the QUV three-dimensional array.
- the pixels outside the contour are set to 0, and the QUV three-dimensional array is drawn in RGB to obtain the test sample.
- the following is the calculation process of polarization state:
- ⁇ is the phase difference between the H and V channels
- IMG_V * is the complex conjugate of IMG_V
- imag represents the complex
- the imaginary part of a number, real represents the real part of a complex number.
- Step 3 Filter.
- the filtering methods can be the following but are not limited to: median filtering, Gaussian filtering, mean filtering, imbox filtering, wiener filtering, dilation and corrosion, etc.
- Step 4 Construct a three-dimensional array. Construct Q, U, and V into x*y*3 three-dimensional array Stokes, then filter the Stokes through the contour Msk_Thr array, set the pixel values outside the contour to 0, and finally draw the resulting three-dimensional array in RGB format , obtain the polarization color image of the contour of the sample to be tested
- the Poincaré sphere is used to extract the spatial subnormal vector Bn of the PS-OCT image plane, and the second and third dimensions of Bn are swapped to obtain an x*y*3 matrix, where x and y represent the number of rows of image pixels. and the number of columns; after filtering the contour of the sample to be tested, the optical axis image is obtained.
- P1, P2, and P3 are three polarization states represented by Stokes parameters (S1, S2, S3), on a sphere; plane a is a plane fitted by three points P1, P2, and P3; A1 is the plane normal vector of a, which is the optical axis required here.
- P1 is the incident polarization state or input polarization state. Since P1 is incident on the surface of the sample and is directly reflected by the surface into the output polarization state without changing the polarization information, P1 is also the output polarization state.
- P2 and P3 are obtained by rotating P1 at a certain angle around the optical axis A1 of the sample.
- P1, P2, and P3 are the output polarization states received by the balanced detector
- N n B n ⁇ T n
- T n is the unit tangent vector formed by P n+1 and P n , T n-1 and T n form a close plane
- B n is the space subnormal vector of the plane, which is used to calculate the optical axis
- N n is the normal vector in this plane and is used to calculate the phase delay.
- the second and third dimensions of Bn are swapped to obtain an x*y*3 matrix (x and y represent the number of rows and columns of image pixels), and then through Msk_Thr filtering, the optical axis image can be obtained.
- ⁇ n is the local phase delay
- N n is the normal vector in the nth close plane
- N n-1 is the normal vector of the n-1th close plane
- the optical axis represented by Bn is the result of superimposing the birefringence effect of tissues at different depths. Deep in the tissue, the accumulated birefringence effect will cause distortion of the results. Therefore, the birefringence effect accumulated with depth must be removed to restore the depth of the tissue.
- the real optical axis information that is, the local optical axis, is A 2 in the figure below.
- a n R n-1 (- ⁇ n-1 ; A n-2 )R n-2 (- ⁇ n-2 ; A n-2 )...R 1 (- ⁇ 1 ; A 1 )B n
- a 2 R 1 (- ⁇ 1 ; A 1 )B 2
- E is the third-order standard identity matrix
- R n is the 3*3 rotation matrix from the n-1th optical axis to the nth optical axis
- ⁇ n is the phase delay of the nth close plane
- a n (x) , A n (y), and A n (z) are respectively the three dimensions of the local optical axis An of the three-dimensional array.
- the average gradient fusion of multiple images includes the following methods:
- the gradient features and adjustable fusion weight coefficients are used to fuse the three image calculation results.
- P represents the six images of polarization state, local phase retardation, and local optical axis, all of which are normalized by the above formula.
- M and N represent the width and height of the image respectively
- ⁇ x P (x, y) and ⁇ y P (x, y) respectively represent the difference calculation of the image P (x, y) in the x, y direction, Calculated as follows:
- the gradient features are used to fuse the three solution results.
- the fusion formula is as follows:
- F P a 1 *G Stokes *Stokes′+a 2 *G LocDP *LocDP′+a 3 *G LocOptAxis *LocOptAxis′
- a 1 + a 2 + a 3 1, which is the fusion weight coefficient.
- a clearer fusion image can be obtained, the same below. Images with greater information content have greater weights.
- weighted fusion of multiple images includes the following methods:
- d i is the fusion coefficient
- d 1 0.4
- d 2 0.2
- d 3 0.4
- Fusimage i represents the image after grayscale feature fusion, shape feature fusion and texture feature fusion
- the grayscale feature fusion includes the following process:
- grayscale feature values from grayscale images, where the grayscale feature values include mean, variance, energy, slope, and kurtosis;
- the fused five grayscale feature value fused images are fused again to finally become one grayscale fused image.
- the shape feature fusion includes: extracting shape features from three types of grayscale images and normalizing the central moments; obtaining 7 invariant moment shape features, and using the 7 shape features as shape features Vector, form a shape feature matrix, use the shape feature matrix to perform shape fusion, and obtain the shape fusion image.
- the texture feature fusion includes: extracting texture features from three types of grayscale images, where the texture features include: energy, entropy, contrast and correlation; using texture features to construct a texture feature vector, and combining the three types of grayscale images.
- the images are fused according to the constructed four texture feature vectors; four texture feature images are formed, and then the four texture feature images are fused according to equal weights to form a texture fusion image.
- Grayscale features include five statistics: mean m, variance v 2 , energy e, slope s, and kurtosis u. The meanings and calculation formulas of these five statistics are as follows:
- T represents the gray level
- di represents the number of pixels when the gray value is i
- D represents the total number of pixels in the image.
- Mean m represents the average value of image energy.
- the calculation formula is as follows:
- Variance v 2 represents the distribution of image gray value, the calculation formula is as follows:
- Energy e represents the distribution of image grayscale. When the distribution is more uniform, the energy is greater.
- the calculation formula is as follows:
- Slope s represents the asymmetry of the image histogram distribution. The higher the slope, the more asymmetric the histogram distribution.
- the calculation formula is as follows:
- Kurtosis u represents that the grayscale distribution of the image is close to its mean. It is used to analyze whether the grayscale distribution converges around its mean. The smaller the kurtosis value, the more concentrated the distribution is at the mean. The calculation formula is as follows:
- the results of the three solving methods are fused into five feature value maps based on five grayscale features using weighted fusion.
- the characteristic vectors of the three solution results are represented as h 1 , h 2 , h 3 , respectively, and the weights of each characteristic quantity are as follows:
- the five fused feature quantities are fused again to obtain an image with grayscale features.
- the formula is as follows:
- b 1 +b 2 +b 3 +b 4 +b 5 1, which are 0.2, 0.2, 0.3, 0.3, and 0 respectively in the experiment.
- X and Y represent the width and height of the image
- x and y represent the x-th and y-th pixels in the width and height directions, that is, the coordinates in the image.
- the central moment is normalized according to the following formula:
- ⁇ 3 (n 30 -3n 12 ) 2 + (3n 21 -n 03 ) 2
- ⁇ 5 ( ⁇ 30 -3 ⁇ 12 )( ⁇ 32 + ⁇ 12 ) ⁇ [( ⁇ 30 + ⁇ 12 ) 2 -3( ⁇ 21 + ⁇ 23 ) 2 ]
- ⁇ 6 ( ⁇ 20 - ⁇ 02 ) ⁇ [( ⁇ 30 + ⁇ 12 ) 2 -( ⁇ 21 + ⁇ 03 ) 2 ]+4 ⁇ 11 ( ⁇ 30 + ⁇ 12 )( ⁇ 21 + ⁇ 03 )
- ⁇ 7 (3n 21 -n 03 ) (n 30 +n 12 ) ⁇ [(n 30 +n 12 ) 2 -3 (n 21 +n 03 ) 2 ]
- the eta value with numerical subscript in the formula represents the normalized central moment value corresponding to p and q orders.
- the extraction of texture features is based on the gray level co-occurrence matrix.
- the gray level histogram can only directly describe the gray level distribution of one pixel, but the gray level co-occurrence matrix can describe the combined gray level distribution of two pixels.
- its grayscale distribution is (gx, gy).
- (x, y) moves (x+i, y+j) points will be obtained, and the corresponding (gx’, gy’) will also be generated.
- Count the number of grayscale values that appear in an image, and form all the grayscale values into a square matrix.
- the probability of is called the gray level co-occurrence matrix.
- the normalized formula of the gray level co-occurrence matrix is as follows: where Z represents the width and height of the square matrix image, that is, the image size is Z ⁇ Z:
- the energy value can not only describe the uniformity of grayscale distribution, but also express the texture thickness to a certain extent.
- E When the values of all parameters in the gray-level co-occurrence matrix P (gx, gy) are equal, E is relatively small; when the difference in parameter values is obvious, E becomes large.
- E When the parameters in the gray-level co-occurrence matrix are close to the center, E is larger, indicating that the image texture has good uniformity and changes regularly.
- the calculation method is to square the parameters of the elements in the gray level co-occurrence matrix P (gx, gy) first and then sum them, as follows:
- Entropy is used to represent the complexity of the image texture. When the values of the co-occurrence matrix are relatively uniform, the entropy is larger. The calculation formula is as follows:
- Contrast I Contrast is used to express the clarity of an image. The smaller the contrast, the shallower the grooves used to express the unevenness of the object's surface, and the lower the clarity of the image.
- the calculation formula is as follows:
- Correlation is used to represent the degree to which the parameters of the gray-level co-occurrence matrix P(gx,gy) are the same in the horizontal and vertical directions.
- the correlation value in a certain direction is greater than other directions, the texture characteristics in that direction Obviously, the correlation can therefore look for directions in which the texture is relatively strong.
- the calculation formula is as follows:
- ⁇ x , ⁇ y , ⁇ y , and ⁇ x are intermediate variables, and their calculation formulas are as follows:
- the feature vectors of the three solution result images are Y 1 , Y 2 , Y 3 respectively, and the weight
- the value calculation formula is as follows:
- Pi (x, y) represents the result image of the three solution methods.
- the FI j distribution represents the four feature images after fusion.
- d i is the fusion coefficient.
- the present invention also provides a PS-OCT visibility improvement system based on polarization multi-parameter fusion, which is used to implement the above-mentioned PS-OCT visibility improvement method based on polarization multi-parameter fusion, including an image acquisition module , image processing module and image fusion module;
- the image acquisition module is used to acquire the original PS-OCT image, preprocess the original PS-OCT image, and obtain the outline of the sample to be tested;
- the image processing module is used to filter the QUV three-dimensional array constructed based on the Stokes matrix using the contour of the sample to be tested, and obtain the polarization state image, polarization degree DOPU image and phase delay DPPR image; according to the calculated polarization state, Use the Poincaré sphere to calculate the optical axis image, local optical axis image and local phase delay image;
- the image fusion module is used to perform average gradient fusion or weighted fusion on the multiple images obtained above, and obtain the final PS-OCT image after fusion.
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Abstract
Description
Claims (13)
- 一种基于偏振多参量融合的PS-OCT可视度提升方法,其特征在于,包括以下步骤:S1、获取原始的PS-OCT图像,并对原始的PS-OCT图像进行预处理,获取待测样品的轮廓;S2、利用待测样品轮廓,对基于Stokes矩阵,构建的QUV三维数组进行滤波,得到偏振态图像;S3、根据计算得出的偏振态,利用庞加莱球计算局部光轴图像和局部相位延迟图像;S4、将S2和S3中得出的多种图像进行平均梯度融合或加权融合,融合后得到最终PS-OCT图像。
- 根据权利要求1所述的基于偏振多参量融合的PS-OCT可视度提升方法,其特征在于,在S1中,所述预处理包括如下步骤:S101、将原始的PS-OCT图像中的两个偏振态H通道数据和V通道数据,乘以余弦锥型窗进行整形;S102、对整形后的数据进行傅里叶变换,得到H通道和V通道的傅里叶域矩阵;S103、对H通道和V通道的傅里叶域矩阵,取平均值后,作为H通道和V通道的原始图像,将H通道和V通道的原始图像进行融合;S104、对融合后的图像按照设定的阈值滤除噪声,得到待测样品的轮廓。
- 根据权利要求1所述的基于偏振多参量融合的PS-OCT可视度提升方法,其特征在于,在S2中,所述偏振态图像采用如下方法:对Stokes矩阵进行归一化后形成QUV三维数组,利用待测样品轮廓,对QUV三维数组进行滤波,将轮廓外的像素点置0,并将QUV三维数组以RGB的方式描绘出来,得到待测样品轮廓的偏振态彩色图像。
- 根据权利要求1所述的基于偏振多参量融合的PS-OCT可视度提升方法,其特征在于,在S3中,在计算局部光轴图像时,还包括利用庞加莱球提取PS-OCT图像平面的空间副法向量Bn,将Bn的第二维和第三维进行对调,得到x*y*3的矩阵,其中,x和y代表图像像素的行数和列数;经过待测样品的轮廓滤波,得到光轴图像。
- 根据权利要求6所述的基于偏振多参量融合的PS-OCT可视度提升方法,其特征在于,所述局部光轴图像采用如下公式计算:A n=R n-1(-δ n-1;A n-1)R n-2(-δ n-2;A n-2)…R 1(-δ 1;A 1)B n其中,A n为局部光轴,B n代表叠加了不同深度组织双折射效应的光轴,R n是第n-1个光轴到第n个光轴的3*3旋转矩阵,δ n为第n个密切平面的相位延迟,A n(x)、A n(y)、A n(z)分别为三维数组局部光轴An的三个维度。
- 根据权利要求1所述的基于偏振多参量融合的PS-OCT可视度提升方法, 其特征在于,在S4中,将多种图像进行平均梯度融合包括如下方法:将偏振态图像、局部光轴图像和局部相位延迟图像,3种图像进行归一化;利用梯度特征和可调的融合权值系数,将3种图像解算结果进行融合。
- 根据权利要求9所述的基于偏振多参量融合的PS-OCT可视度提升方法,其特征在于,在S402中,所述灰度特征融合包括以下过程:对灰度图像进行灰度特征值提取,所述灰度特征值包括均值、方差、能量、倾斜度、峰态;将原来3种图像采用加权融合的方式融合成5张基于所述灰度特征值的图;分别计算五个灰度特征值的融合图像;对融合后的五张灰度特征值的融合图像再次进行融合,最终成为一张灰度融合图像。
- 根据权利要求9所述的基于偏振多参量融合的PS-OCT可视度提升方法,其特征在于,在S402中,所述形状特征融合包括:对3种灰度图像进行形状特 征提取,并对中心矩进行归一化;得出7个不变矩的形状特征,将7个形状特征作为形状特征矢量,形成一个形状特征矩阵,利用形状特征矩阵进行形状融合,得到形状融合图像。
- 根据权利要求9所述的基于偏振多参量融合的PS-OCT可视度提升方法,其特征在于,在S402中,所述纹理特征融合包括:对3种灰度图像进行纹理特征提取,所述纹理特征包括:能量、熵、对比度和相关性;利用纹理特征构建纹理特征矢量,将3种灰度图像按照构建的4种纹理特征矢量,进行融合;形成4种纹理特征图像,再将所述4种纹理特征图像按照等权重进行融合,形成纹理融合图像。
- 一种基于偏振多参量融合的PS-OCT可视度提升系统,用于实施上述权利要求1-12中任意一项所述的基于偏振多参量融合的PS-OCT可视度提升方法,其特征在于,包括图像获取模块,图像处理模块和图像融合模块;所述图像获取模块,用于获取原始的PS-OCT图像,并对原始的PS-OCT图像进行预处理,获取待测样品的轮廓;所述图像处理模块,用于利用待测样品轮廓,对基于Stokes矩阵,构建的QUV三维数组进行滤波,得到偏振态图像,根据计算得出的偏振态,利用庞加莱球计算局部光轴图像和局部相位延迟图像;所述图像融合模块,用于将上述得出的多种图像进行平均梯度融合或加权融合,融合后得到最终PS-OCT图像。
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