ATE335851T1 - Verfahren zur abschätzung des diplotyps aus dem genotyp eines individuums - Google Patents

Verfahren zur abschätzung des diplotyps aus dem genotyp eines individuums

Info

Publication number
ATE335851T1
ATE335851T1 AT02717173T AT02717173T ATE335851T1 AT E335851 T1 ATE335851 T1 AT E335851T1 AT 02717173 T AT02717173 T AT 02717173T AT 02717173 T AT02717173 T AT 02717173T AT E335851 T1 ATE335851 T1 AT E335851T1
Authority
AT
Austria
Prior art keywords
diplotype
individual
genotype
estimating
inferred
Prior art date
Application number
AT02717173T
Other languages
English (en)
Inventor
Naoyuki Kamatani
Yutaka Kitamura
Original Assignee
Hubit Genomix Inc
Stagen Co Ltd
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Hubit Genomix Inc, Stagen Co Ltd filed Critical Hubit Genomix Inc
Application granted granted Critical
Publication of ATE335851T1 publication Critical patent/ATE335851T1/de

Links

Classifications

    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/40—Population genetics; Linkage disequilibrium
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/20—Allele or variant detection, e.g. single nucleotide polymorphism [SNP] detection
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Engineering & Computer Science (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Medical Informatics (AREA)
  • Biotechnology (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Genetics & Genomics (AREA)
  • Theoretical Computer Science (AREA)
  • Biophysics (AREA)
  • General Health & Medical Sciences (AREA)
  • Evolutionary Biology (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Analytical Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Molecular Biology (AREA)
  • Chemical & Material Sciences (AREA)
  • Data Mining & Analysis (AREA)
  • Epidemiology (AREA)
  • Artificial Intelligence (AREA)
  • Bioethics (AREA)
  • Computer Vision & Pattern Recognition (AREA)
  • Physiology (AREA)
  • Databases & Information Systems (AREA)
  • Ecology (AREA)
  • Evolutionary Computation (AREA)
  • Public Health (AREA)
  • Software Systems (AREA)
  • Complex Calculations (AREA)
  • Management, Administration, Business Operations System, And Electronic Commerce (AREA)
  • Testing, Inspecting, Measuring Of Stereoscopic Televisions And Televisions (AREA)
  • Maintenance And Management Of Digital Transmission (AREA)
AT02717173T 2001-04-19 2002-04-16 Verfahren zur abschätzung des diplotyps aus dem genotyp eines individuums ATE335851T1 (de)

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
JP2001121641 2001-04-19

Publications (1)

Publication Number Publication Date
ATE335851T1 true ATE335851T1 (de) 2006-09-15

Family

ID=18971470

Family Applications (1)

Application Number Title Priority Date Filing Date
AT02717173T ATE335851T1 (de) 2001-04-19 2002-04-16 Verfahren zur abschätzung des diplotyps aus dem genotyp eines individuums

Country Status (5)

Country Link
EP (1) EP1386973B1 (de)
JP (1) JPWO2002086161A1 (de)
AT (1) ATE335851T1 (de)
DE (1) DE60213783D1 (de)
WO (1) WO2002086161A1 (de)

Families Citing this family (8)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
KR100561854B1 (ko) 2003-12-16 2006-03-16 삼성전자주식회사 해플로타입 데이터의 저장, 이를 위한 정렬 방법 및 이에따른 검색 방법
JP2006293481A (ja) * 2005-04-06 2006-10-26 Hitachi Software Eng Co Ltd 遺伝子データ解析方法プログラム
CN103146820B (zh) * 2013-02-22 2014-07-02 公安部物证鉴定中心 一种推断未知来源个体汉、藏、维群体来源的方法和系统
WO2017120556A1 (en) * 2016-01-07 2017-07-13 The Children's Mercy Hospital A system for determining diplotypes
US20170270245A1 (en) 2016-01-11 2017-09-21 Edico Genome, Corp. Bioinformatics systems, apparatuses, and methods for performing secondary and/or tertiary processing
DK3982368T3 (da) * 2016-06-07 2024-06-24 Illumina Inc Bioinformatiksystemer, apparater og fremgangsmåder til udførelse af sekundær og/eller tertiær processering
EP4490735A1 (de) 2022-03-08 2025-01-15 Illumina Inc Softwarebeschleunigte genomische lese-mapping-engine mit mehreren durchgängen
JP7826148B2 (ja) * 2022-08-18 2026-03-09 株式会社東芝 情報処理装置、情報処理方法およびプログラム

Family Cites Families (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6531279B1 (en) * 1998-04-15 2003-03-11 Genset S.A. Genomic sequence of the 5-lipoxygenase-activating protein (FLAP), polymorphic markers thereof and methods for detection of asthma
WO2001080156A1 (en) * 2000-04-18 2001-10-25 Genaissance Pharmaceuticals, Inc. Method and system for determining haplotypes from a collection of polymorphisms
US20020077775A1 (en) * 2000-05-25 2002-06-20 Schork Nicholas J. Methods of DNA marker-based genetic analysis using estimated haplotype frequencies and uses thereof

Also Published As

Publication number Publication date
EP1386973A1 (de) 2004-02-04
JPWO2002086161A1 (ja) 2004-08-12
EP1386973B1 (de) 2006-08-09
WO2002086161A1 (en) 2002-10-31
EP1386973A4 (de) 2004-09-08
DE60213783D1 (de) 2006-09-21

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