ATE471387T1 - Screening-verfahren zur identifizierung wirksamer prä-trans-spleissmoleküle - Google Patents

Screening-verfahren zur identifizierung wirksamer prä-trans-spleissmoleküle

Info

Publication number
ATE471387T1
ATE471387T1 AT03779324T AT03779324T ATE471387T1 AT E471387 T1 ATE471387 T1 AT E471387T1 AT 03779324 T AT03779324 T AT 03779324T AT 03779324 T AT03779324 T AT 03779324T AT E471387 T1 ATE471387 T1 AT E471387T1
Authority
AT
Austria
Prior art keywords
ptm
reporter molecule
optimal
trans
ptms
Prior art date
Application number
AT03779324T
Other languages
English (en)
Inventor
Lloyd Mitchell
Madaiah Puttaraju
Mariano Garcia-Blanco
Edward Otto
Yanping Yang
Original Assignee
Virxsys Corp
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Virxsys Corp filed Critical Virxsys Corp
Application granted granted Critical
Publication of ATE471387T1 publication Critical patent/ATE471387T1/de

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/10Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/102Mutagenizing nucleic acids
    • C12N15/1027Mutagenizing nucleic acids by DNA shuffling, e.g. RSR, STEP, RPR
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/10Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/1034Isolating an individual clone by screening libraries
    • C12N15/1086Preparation or screening of expression libraries, e.g. reporter assays
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/5005Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving human or animal cells
    • G01N33/5008Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving human or animal cells for testing or evaluating the effect of chemical or biological compounds, e.g. drugs, cosmetics
    • G01N33/502Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving human or animal cells for testing or evaluating the effect of chemical or biological compounds, e.g. drugs, cosmetics for testing non-proliferative effects
    • G01N33/5023Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving human or animal cells for testing or evaluating the effect of chemical or biological compounds, e.g. drugs, cosmetics for testing non-proliferative effects on expression patterns

Landscapes

  • Health & Medical Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Chemical & Material Sciences (AREA)
  • Biomedical Technology (AREA)
  • Genetics & Genomics (AREA)
  • Biotechnology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Organic Chemistry (AREA)
  • Wood Science & Technology (AREA)
  • General Engineering & Computer Science (AREA)
  • Molecular Biology (AREA)
  • Zoology (AREA)
  • Microbiology (AREA)
  • Immunology (AREA)
  • Biochemistry (AREA)
  • General Health & Medical Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Crystallography & Structural Chemistry (AREA)
  • Urology & Nephrology (AREA)
  • Plant Pathology (AREA)
  • Hematology (AREA)
  • Biophysics (AREA)
  • Food Science & Technology (AREA)
  • Analytical Chemistry (AREA)
  • Pathology (AREA)
  • General Physics & Mathematics (AREA)
  • Medicinal Chemistry (AREA)
  • Cell Biology (AREA)
  • Tropical Medicine & Parasitology (AREA)
  • Toxicology (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Micro-Organisms Or Cultivation Processes Thereof (AREA)
  • Investigating Or Analysing Materials By The Use Of Chemical Reactions (AREA)
AT03779324T 2002-10-23 2003-10-23 Screening-verfahren zur identifizierung wirksamer prä-trans-spleissmoleküle ATE471387T1 (de)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US42049802P 2002-10-23 2002-10-23
PCT/US2003/034102 WO2004038380A2 (en) 2002-10-23 2003-10-23 Screening methods for identification of efficient pre-trans-splicing molecules

Publications (1)

Publication Number Publication Date
ATE471387T1 true ATE471387T1 (de) 2010-07-15

Family

ID=32176581

Family Applications (1)

Application Number Title Priority Date Filing Date
AT03779324T ATE471387T1 (de) 2002-10-23 2003-10-23 Screening-verfahren zur identifizierung wirksamer prä-trans-spleissmoleküle

Country Status (8)

Country Link
US (1) US20060154257A1 (de)
EP (1) EP1579004B1 (de)
JP (1) JP4654033B2 (de)
AT (1) ATE471387T1 (de)
AU (1) AU2003285009B2 (de)
CA (1) CA2503247A1 (de)
DE (1) DE60333032D1 (de)
WO (1) WO2004038380A2 (de)

Families Citing this family (19)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US8053232B2 (en) * 2004-01-23 2011-11-08 Virxsys Corporation Correction of alpha-1-antitrypsin genetic defects using spliceosome mediated RNA trans splicing
EP1716165A4 (de) * 2004-01-23 2008-06-18 Virxsys Corp Expression von apoa-1 und varianten davon unter verwendung des spleissosom-vermittelten rna-trans-spleissens
US7968334B2 (en) * 2004-01-23 2011-06-28 Virxsys Corporation Expression of apoAI and variants thereof using spliceosome mediated RNA trans-splicing
US20060094110A1 (en) * 2004-07-30 2006-05-04 Mcgarrity Gerard J Use of spliceosome mediated RNA trans-splicing for immunotherapy
US7871795B2 (en) * 2004-10-08 2011-01-18 Virxsys Corporation Targeted trans-splicing of highly abundant transcripts for in vivo production of recombinant proteins
DE102006034964B3 (de) * 2006-07-28 2007-09-06 Semikron Elektronik Gmbh & Co. Kg Anordnung mit einem Leistungshalbleiterbauelement und mit einer Kontakteinrichtung
WO2010022194A2 (en) * 2008-08-20 2010-02-25 Virxsys Corporation Compositions and methods for generation of pluripotent stem cells
WO2013166460A1 (en) * 2012-05-04 2013-11-07 The Regents Of The University Of California Antibiotic susceptibility testing using probes for preribosomal rna
WO2014110509A1 (en) * 2013-01-14 2014-07-17 Cellecta, Inc. Methods and compositions for single cell expression profiling
MX2016000811A (es) * 2013-07-23 2016-10-13 Univ California Amdinocilina para la rápida determinación de la susceptibilidad a antibióticos beta-lactámicos.
CA3005474A1 (en) 2015-11-19 2017-05-26 The Trustees Of The University Of Pennsylvania Compositions and methods for correction of heritable ocular disease
EP3436590A4 (de) 2016-04-01 2019-12-04 National University of Singapore Transspleissen von rna (tsrna)
IT201700105372A1 (it) * 2017-09-20 2019-03-20 Fondazione St Italiano Tecnologia Molecola di acido nucleico funzionale e relativo uso
KR102866133B1 (ko) 2018-04-17 2025-09-30 더 트러스티스 오브 더 유니버시티 오브 펜실바니아 트랜스-스플라이싱 분자
CN110819707B (zh) * 2019-11-24 2023-07-18 中南大学湘雅医院 一种针对多种来源细胞样本中内部核糖体结合位点元件的高通量鉴定方法
GB202102118D0 (en) * 2021-02-15 2021-03-31 Cambridge Entpr Ltd RNA Trans-Splicing molecule
EP4522758A4 (de) 2022-05-13 2026-05-06 Ascidian Therapeutics Inc Abca4-transspleissmoleküle
WO2026012439A1 (en) * 2024-07-11 2026-01-15 Sichuan Real & Best Biotech Co., Ltd. Rna trans-splicing molecules and systems
CN121344095B (zh) * 2025-12-16 2026-04-28 北京肿瘤医院(北京大学肿瘤医院) 一种细胞内mRNA传感器开关的DNA文库筛选方法及应用

Family Cites Families (35)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US4980286A (en) * 1985-07-05 1990-12-25 Whitehead Institute For Biomedical Research In vivo introduction and expression of foreign genetic material in epithelial cells
US5585362A (en) * 1989-08-22 1996-12-17 The Regents Of The University Of Michigan Adenovirus vectors for gene therapy
US5616326A (en) * 1990-01-25 1997-04-01 The University Court Of The University Of Glasgow Recombinant canine adenovirus 2 (CAV-2)
US5670488A (en) * 1992-12-03 1997-09-23 Genzyme Corporation Adenovirus vector for gene therapy
US5173414A (en) * 1990-10-30 1992-12-22 Applied Immune Sciences, Inc. Production of recombinant adeno-associated virus vectors
GB9223084D0 (en) * 1992-11-04 1992-12-16 Imp Cancer Res Tech Compounds to target cells
US5919676A (en) * 1993-06-24 1999-07-06 Advec, Inc. Adenoviral vector system comprising Cre-loxP recombination
US5747072A (en) * 1993-07-30 1998-05-05 University Of Michigan Adenoviral-mediated gene transfer to synovial cells in vivo
TW442569B (en) * 1993-10-25 2001-06-23 Canji Inc Recombinant adenoviral vector
PT728214E (pt) * 1993-11-09 2004-11-30 Ohio Med College Linhas celulares estaveis capazes de expressar o gene de replicacao do virus adeno-associado
US5820868A (en) * 1993-12-09 1998-10-13 Veterinary Infectious Disease Organization Recombinant protein production in bovine adenovirus expression vector system
FR2716682B1 (fr) * 1994-01-28 1996-04-26 Centre Nat Rech Scient Procédé de préparation de virus adéno-associés (AAV) recombinants et utilisations.
US5928944A (en) * 1994-02-04 1999-07-27 The United States Of America As Represented By The Department Of Health And Human Services Method of adenoviral-medicated cell transfection
CA2117668C (en) * 1994-03-09 2005-08-09 Izumu Saito Recombinant adenovirus and process for producing the same
US5851806A (en) * 1994-06-10 1998-12-22 Genvec, Inc. Complementary adenoviral systems and cell lines
US5962311A (en) * 1994-09-08 1999-10-05 Genvec, Inc. Short-shafted adenoviral fiber and its use
US5856152A (en) * 1994-10-28 1999-01-05 The Trustees Of The University Of Pennsylvania Hybrid adenovirus-AAV vector and methods of use therefor
US5693609A (en) * 1994-11-17 1997-12-02 Eli Lilly And Company Acylated insulin analogs
US5998205A (en) * 1994-11-28 1999-12-07 Genetic Therapy, Inc. Vectors for tissue-specific replication
US5843742A (en) * 1994-12-16 1998-12-01 Avigen Incorporated Adeno-associated derived vector systems for gene delivery and integration into target cells
JP3770333B2 (ja) * 1995-03-15 2006-04-26 大日本住友製薬株式会社 組換えdnaウイルスおよびその製造方法
US5756283A (en) * 1995-06-05 1998-05-26 The Trustees Of The University Of Pennsylvania Method for improved production of recombinant adeno-associated viruses for gene therapy
US20020115207A1 (en) * 1995-12-15 2002-08-22 Mitchell Lloyd G. Methods and compositions for use in spliceosome mediated RNA trans-splicing
ATE354957T1 (de) * 1995-12-15 2006-03-15 Intronn Inc Durch trans-spaltung erhaltene therapeutische molekule
US6083702A (en) * 1995-12-15 2000-07-04 Intronn Holdings Llc Methods and compositions for use in spliceosome mediated RNA trans-splicing
US6280978B1 (en) * 1995-12-15 2001-08-28 Intronn Holdings, Llc Methods and compositions for use in spliceosome mediated RNA trans-splicing
US5858351A (en) * 1996-01-18 1999-01-12 Avigen, Inc. Methods for delivering DNA to muscle cells using recombinant adeno-associated virus vectors
US5962313A (en) * 1996-01-18 1999-10-05 Avigen, Inc. Adeno-associated virus vectors comprising a gene encoding a lyosomal enzyme
US6541197B2 (en) * 1996-01-22 2003-04-01 Human Gene Therapy Research Institute Vehicles for stable transfer of green fluorescent protein gene and methods of use for same
US5952221A (en) * 1996-03-06 1999-09-14 Avigen, Inc. Adeno-associated virus vectors comprising a first and second nucleic acid sequence
US5891690A (en) * 1996-04-26 1999-04-06 Massie; Bernard Adenovirus E1-complementing cell lines
US5877011A (en) * 1996-11-20 1999-03-02 Genzyme Corporation Chimeric adenoviral vectors
US6897066B1 (en) * 1997-09-26 2005-05-24 Athersys, Inc. Compositions and methods for non-targeted activation of endogenous genes
WO2000055378A1 (en) * 1999-03-16 2000-09-21 Dana-Farber Cancer Institute, Inc. Lentiviral vector system for high quantity screening
WO2003035834A2 (en) * 2001-10-22 2003-05-01 Athersys, Inc. Compositions and methods for making mutations in cell lines and animals

Also Published As

Publication number Publication date
US20060154257A1 (en) 2006-07-13
CA2503247A1 (en) 2004-05-06
EP1579004A4 (de) 2006-06-28
WO2004038380A2 (en) 2004-05-06
EP1579004A2 (de) 2005-09-28
DE60333032D1 (de) 2010-07-29
EP1579004B1 (de) 2010-06-16
AU2003285009B2 (en) 2010-10-07
JP2006506984A (ja) 2006-03-02
JP4654033B2 (ja) 2011-03-16
WO2004038380A3 (en) 2005-04-21
AU2003285009A1 (en) 2004-05-13

Similar Documents

Publication Publication Date Title
ATE471387T1 (de) Screening-verfahren zur identifizierung wirksamer prä-trans-spleissmoleküle
Lee et al. Advances in CLIP technologies for studies of protein-RNA interactions
Gambill et al. A split ribozyme that links detection of a native RNA to orthogonal protein outputs
Parker et al. m6A modification of U6 snRNA modulates usage of two major classes of pre-mRNA 5’splice site
Birol et al. Assembling the 20 Gb white spruce (Picea glauca) genome from whole-genome shotgun sequencing data
Weiner et al. Enhancing heterologous expression in Chlamydomonas reinhardtii by transcript sequence optimization
Narrowe et al. Uncovering the diversity and activity of methylotrophic methanogens in freshwater wetland soils
DK1507865T3 (da) Fröen som eventyrprins, en transposonvektor for overföring af gener i hvirveldyr
RU2006124515A (ru) СПОСОБ ПРОГНОЗИРОВАНИЯ ЭФФЕКТИВНОСТИ ИНТЕРФЕРИРУЮЩЕЙ РНК (PHKi)
CA3046824A1 (en) Thermostable cas9 nucleases
Tzani et al. Tracing production instability in a clonally derived CHO cell line using single‐cell transcriptomics
Lutzmayer et al. Novel small RNA spike-in oligonucleotides enable absolute normalization of small RNA-Seq data
US20230348958A1 (en) Genome-scale imaging of the 3d organization and transcriptional activity of chromatin
Yang et al. CRISPR-array-mediated imaging of non-repetitive and multiplex genomic loci in living cells
DK1809750T3 (da) Selektion af værtsceller, der udtrykker protein ved høje niveauer
Zhang et al. Primary sequence-assisted prediction of m6A RNA methylation sites from Oxford nanopore direct RNA sequencing data
Varman et al. Hybrid phenolic-inducible promoters towards construction of self-inducible systems for microbial lignin valorization
Shi et al. Polymerase-extension-based selection method for DNA-encoded chemical libraries against nonimmobilized protein targets
Buerger et al. Wiring cell growth to product formation
Wower et al. SmpB: a protein that binds to double-stranded segments in tmRNA and tRNA
Nadal-Ribelles et al. Transcriptional heterogeneity shapes stress-adaptive responses in yeast
ATE524563T1 (de) System zur herstellung synthetischer promotoren
Martin-Gonzalez et al. DNA supercoiling enhances DNA condensation by ParB proteins
Chiara et al. A-GAME: improving the assembly of pooled functional metagenomics sequence data
Battjes et al. Mitochondrial efficiency determines Crabtree effect across yeasts

Legal Events

Date Code Title Description
RER Ceased as to paragraph 5 lit. 3 law introducing patent treaties