ATE497020T1 - Verfahren zur kartierung von polymorphismen und polymorphismus-mikroarrays - Google Patents
Verfahren zur kartierung von polymorphismen und polymorphismus-mikroarraysInfo
- Publication number
- ATE497020T1 ATE497020T1 AT06752497T AT06752497T ATE497020T1 AT E497020 T1 ATE497020 T1 AT E497020T1 AT 06752497 T AT06752497 T AT 06752497T AT 06752497 T AT06752497 T AT 06752497T AT E497020 T1 ATE497020 T1 AT E497020T1
- Authority
- AT
- Austria
- Prior art keywords
- dna
- tags
- polymorphism
- populations
- collection
- Prior art date
Links
- 238000000034 method Methods 0.000 title abstract 3
- 238000002493 microarray Methods 0.000 title abstract 2
- 238000013507 mapping Methods 0.000 title 1
- 108020004414 DNA Proteins 0.000 abstract 3
- 108020004707 nucleic acids Proteins 0.000 abstract 2
- 102000039446 nucleic acids Human genes 0.000 abstract 2
- 150000007523 nucleic acids Chemical class 0.000 abstract 2
- 239000002773 nucleotide Substances 0.000 abstract 2
- 125000003729 nucleotide group Chemical group 0.000 abstract 2
- 108091008146 restriction endonucleases Proteins 0.000 abstract 2
- 108091028043 Nucleic acid sequence Proteins 0.000 abstract 1
- 238000013459 approach Methods 0.000 abstract 1
- 239000011324 bead Substances 0.000 abstract 1
- 238000012217 deletion Methods 0.000 abstract 1
- 230000037430 deletion Effects 0.000 abstract 1
- 238000001514 detection method Methods 0.000 abstract 1
- 230000029087 digestion Effects 0.000 abstract 1
- 239000012634 fragment Substances 0.000 abstract 1
- 238000003205 genotyping method Methods 0.000 abstract 1
- 238000003780 insertion Methods 0.000 abstract 1
- 230000037431 insertion Effects 0.000 abstract 1
- 238000002955 isolation Methods 0.000 abstract 1
- 239000000463 material Substances 0.000 abstract 1
- 102000054765 polymorphisms of proteins Human genes 0.000 abstract 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6813—Hybridisation assays
- C12Q1/6827—Hybridisation assays for detection of mutation or polymorphism
- C12Q1/683—Hybridisation assays for detection of mutation or polymorphism involving restriction enzymes, e.g. restriction fragment length polymorphism [RFLP]
Landscapes
- Chemical & Material Sciences (AREA)
- Organic Chemistry (AREA)
- Life Sciences & Earth Sciences (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Health & Medical Sciences (AREA)
- Engineering & Computer Science (AREA)
- Microbiology (AREA)
- Biochemistry (AREA)
- Physics & Mathematics (AREA)
- Molecular Biology (AREA)
- Biotechnology (AREA)
- Biophysics (AREA)
- Analytical Chemistry (AREA)
- Immunology (AREA)
- Bioinformatics & Cheminformatics (AREA)
- General Engineering & Computer Science (AREA)
- General Health & Medical Sciences (AREA)
- Genetics & Genomics (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Apparatus Associated With Microorganisms And Enzymes (AREA)
- Investigating Or Analysing Biological Materials (AREA)
Applications Claiming Priority (3)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US67969305P | 2005-05-10 | 2005-05-10 | |
| US78242406P | 2006-03-14 | 2006-03-14 | |
| PCT/US2006/018150 WO2006122215A2 (en) | 2005-05-10 | 2006-05-10 | Methods of mapping polymorphisms and polymorphism microarrays |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| ATE497020T1 true ATE497020T1 (de) | 2011-02-15 |
Family
ID=36997839
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| AT06752497T ATE497020T1 (de) | 2005-05-10 | 2006-05-10 | Verfahren zur kartierung von polymorphismen und polymorphismus-mikroarrays |
Country Status (9)
| Country | Link |
|---|---|
| US (1) | US9365893B2 (de) |
| EP (1) | EP1885882B1 (de) |
| AT (1) | ATE497020T1 (de) |
| AU (1) | AU2006244042B2 (de) |
| CA (1) | CA2612145A1 (de) |
| DE (1) | DE602006019855D1 (de) |
| DK (1) | DK1885882T3 (de) |
| NZ (1) | NZ564095A (de) |
| WO (1) | WO2006122215A2 (de) |
Families Citing this family (14)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| CA2612145A1 (en) | 2005-05-10 | 2006-11-16 | Eric A. Johnson | Methods of mapping polymorphisms and polymorphism microarrays |
| US8785353B2 (en) | 2005-06-23 | 2014-07-22 | Keygene N.V. | Strategies for high throughput identification and detection of polymorphisms |
| US10316364B2 (en) | 2005-09-29 | 2019-06-11 | Keygene N.V. | Method for identifying the source of an amplicon |
| CA2910861C (en) | 2005-09-29 | 2018-08-07 | Michael Josephus Theresia Van Eijk | High throughput screening of mutagenized populations |
| ES2882401T3 (es) * | 2005-12-22 | 2021-12-01 | Keygene Nv | Método de detección de polimorfismos basado en AFLP de alto rendimiento |
| EP2002017B1 (de) | 2006-04-04 | 2015-06-10 | Keygene N.V. | Nachweis von molekularmarkern mit hohem durchsatz auf der basis von restriktionsfragmenten |
| WO2008153804A2 (en) * | 2007-05-31 | 2008-12-18 | Monsanto Technology Llc | Soybean polymorphisms and methods of genotyping |
| DK2599877T3 (da) * | 2010-06-30 | 2017-11-20 | Bgi Genomics Co Ltd | Hidtil ukendt pcr sekvenseringsfremgangsmåde og anvendelse deraf i hla-genotypebestemmelse |
| CN102560688B (zh) * | 2010-12-15 | 2013-11-20 | 深圳华大基因科技服务有限公司 | 一种新的基于illumina测序平台的文库构建方法 |
| SG11202111928SA (en) * | 2019-05-10 | 2021-11-29 | Univ Hong Kong Chinese | Primers and assays for linking regions using polymerases |
| CN112575102B (zh) * | 2020-12-11 | 2022-08-30 | 武汉市农业科学院 | 控制莲心皮数的主效qtl、snp分子标记、kasp检测引物组及应用 |
| CN113755631B (zh) * | 2021-09-29 | 2024-05-24 | 石家庄博瑞迪生物技术有限公司 | 一种基于mSNP技术检测西葫芦种子纯度的混样检测方法 |
| CN117965794B (zh) * | 2024-02-29 | 2024-09-13 | 云南省农业科学院质量标准与检测技术研究所 | 香石竹品种鉴定的特异性snp分子标记组合及应用 |
| CN118308513B (zh) * | 2024-04-03 | 2025-06-24 | 海南省农业科学院热带园艺研究所 | 一种越南油茶资源SNP和InDel分子标记的多态性引物开发及其应用方法 |
Family Cites Families (37)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US4794075A (en) | 1985-08-29 | 1988-12-27 | Lifecodes Corporation | Method for locating and purifying DNA containing single base mismatches |
| ZA927323B (en) | 1991-09-24 | 1993-08-30 | Keygene Nv | Selective restriction fragment amplification: A general method for DNA fingerprinting |
| US7026115B1 (en) | 1991-09-24 | 2006-04-11 | Keygene N.V. | Selective restriction fragment amplification: fingerprinting |
| US5750335A (en) | 1992-04-24 | 1998-05-12 | Massachusetts Institute Of Technology | Screening for genetic variation |
| GB9214873D0 (en) | 1992-07-13 | 1992-08-26 | Medical Res Council | Process for categorising nucleotide sequence populations |
| US6468742B2 (en) | 1993-11-01 | 2002-10-22 | Nanogen, Inc. | Methods for determination of single nucleic acid polymorphisms using bioelectronic microchip |
| US6110709A (en) | 1994-03-18 | 2000-08-29 | The General Hospital Corporation | Cleaved amplified modified polymorphic sequence detection methods |
| CA2188660C (en) | 1994-04-25 | 2005-01-18 | Richard G. H. Cotton | Detection of mutation by resolvase cleavage |
| US5723320A (en) | 1995-08-29 | 1998-03-03 | Dehlinger; Peter J. | Position-addressable polynucleotide arrays |
| US5922535A (en) | 1995-11-07 | 1999-07-13 | Huo; Li | Identifying sequence differences in nucleic acid populations |
| TW304626U (en) * | 1996-06-26 | 1997-05-01 | United Microelectronics Corp | Ceramic ring structure to guide the chip to slide down to the bottom electrode in a dry etcher |
| US5726022A (en) * | 1996-11-18 | 1998-03-10 | Lifespan Biosciences, Inc. | Subtractive hybridization and capture methods and kits for differential isolation of nucleic acids including disease-associated sequences |
| JP2001521754A (ja) | 1997-10-30 | 2001-11-13 | コールド スプリング ハーバー ラボラトリー | Dna識別のためのプローブアレイ及びプローブアレイの使用方法 |
| IL143486A0 (en) | 1998-12-04 | 2002-04-21 | Keygene Nv | Array and method for analysing nucleic acid sequences |
| EP1024201B1 (de) | 1999-01-27 | 2003-11-26 | Commissariat A L'energie Atomique | Microassay zur Serienanalyse der Genexpression und Anwendungen davon |
| US7135284B1 (en) | 1999-02-05 | 2006-11-14 | Integrated Dna Technologies, Inc. | Primer extension methods for production of high specific activity nucleic acid probes |
| CA2372131A1 (en) | 1999-02-22 | 2000-08-31 | Sydney Brenner | Polymorphic dna fragments and uses thereof |
| WO2000055364A2 (en) * | 1999-03-12 | 2000-09-21 | Amersham Pharmacia Biotech Uk Limited | Genetic analysis |
| DE60025850T2 (de) | 1999-12-29 | 2006-08-03 | Keygene N.V. | Verfahren zur erzeugung von oligonukleotiden, im besonderen zur detektion amplifizierter restriktionsfragmente, die durch aflp erhalten wurden |
| WO2001073119A2 (en) | 2000-03-29 | 2001-10-04 | Cambia | Methods for genotyping by hybridization analysis |
| AU2001258924A1 (en) | 2000-05-15 | 2001-11-26 | Keygene N.V. | Microsatellite-aflp |
| US6934408B2 (en) | 2000-08-25 | 2005-08-23 | Amnis Corporation | Method and apparatus for reading reporter labeled beads |
| WO2002034948A2 (en) | 2000-10-25 | 2002-05-02 | City Of Hope | Candidate region mismatch scanning for genotyping and mutation detection |
| WO2002034949A2 (en) | 2000-10-27 | 2002-05-02 | Molecular Staging Inc. | Methods for identifying genes associated with diseases or specific phenotypes |
| US6783943B2 (en) | 2000-12-20 | 2004-08-31 | The Regents Of The University Of California | Rolling circle amplification detection of RNA and DNA |
| CA2443999A1 (en) | 2001-04-16 | 2002-10-24 | Applera Corporation | Methods and compositions for nucleotide analysis |
| US20050064406A1 (en) * | 2001-04-20 | 2005-03-24 | Eugene Zabarovsky | Methods for high throughput genome analysis using restriction site tagged microarrays |
| US6799122B2 (en) * | 2001-08-31 | 2004-09-28 | Conagra Grocery Products Company | Method for identifying polymorphic markers in a population |
| US20030186279A1 (en) * | 2002-03-28 | 2003-10-02 | Affymetrix, Inc. | Large scale genotyping methods |
| EP1362929A3 (de) | 2002-05-17 | 2004-05-19 | Affymetrix, Inc. | Methoden zur Genotypisierung |
| US7141371B2 (en) * | 2002-09-06 | 2006-11-28 | State Of Oregon Acting By And Through The State Board Of Higher Education On Behalf Of The University Of Oregon | Methods for detecting and localizing DNA mutations by microarray |
| EP1578994A2 (de) | 2002-11-11 | 2005-09-28 | Affymetrix, Inc. | Verfahren zur erkennung von änderungen der dna-kopienanzahl |
| DE602004026033D1 (de) | 2003-01-29 | 2010-04-29 | 454 Corp | Zweiendige sequenzierung |
| CA2612145A1 (en) | 2005-05-10 | 2006-11-16 | Eric A. Johnson | Methods of mapping polymorphisms and polymorphism microarrays |
| US8785353B2 (en) | 2005-06-23 | 2014-07-22 | Keygene N.V. | Strategies for high throughput identification and detection of polymorphisms |
| US20070172839A1 (en) | 2006-01-24 | 2007-07-26 | Smith Douglas R | Asymmetrical adapters and methods of use thereof |
| EP2002017B1 (de) | 2006-04-04 | 2015-06-10 | Keygene N.V. | Nachweis von molekularmarkern mit hohem durchsatz auf der basis von restriktionsfragmenten |
-
2006
- 2006-05-10 CA CA002612145A patent/CA2612145A1/en not_active Abandoned
- 2006-05-10 DK DK06752497.5T patent/DK1885882T3/da active
- 2006-05-10 NZ NZ564095A patent/NZ564095A/en not_active IP Right Cessation
- 2006-05-10 DE DE602006019855T patent/DE602006019855D1/de not_active Expired - Lifetime
- 2006-05-10 AT AT06752497T patent/ATE497020T1/de not_active IP Right Cessation
- 2006-05-10 US US11/914,099 patent/US9365893B2/en active Active
- 2006-05-10 AU AU2006244042A patent/AU2006244042B2/en not_active Ceased
- 2006-05-10 WO PCT/US2006/018150 patent/WO2006122215A2/en not_active Ceased
- 2006-05-10 EP EP06752497A patent/EP1885882B1/de not_active Expired - Lifetime
Also Published As
| Publication number | Publication date |
|---|---|
| EP1885882A2 (de) | 2008-02-13 |
| CA2612145A1 (en) | 2006-11-16 |
| AU2006244042A1 (en) | 2006-11-16 |
| AU2006244042B2 (en) | 2010-07-29 |
| US20080194418A1 (en) | 2008-08-14 |
| WO2006122215A2 (en) | 2006-11-16 |
| DK1885882T3 (da) | 2011-04-11 |
| EP1885882B1 (de) | 2011-01-26 |
| NZ564095A (en) | 2009-06-26 |
| US9365893B2 (en) | 2016-06-14 |
| WO2006122215A3 (en) | 2007-03-22 |
| DE602006019855D1 (de) | 2011-03-10 |
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Legal Events
| Date | Code | Title | Description |
|---|---|---|---|
| RER | Ceased as to paragraph 5 lit. 3 law introducing patent treaties |