ATE497020T1 - Verfahren zur kartierung von polymorphismen und polymorphismus-mikroarrays - Google Patents

Verfahren zur kartierung von polymorphismen und polymorphismus-mikroarrays

Info

Publication number
ATE497020T1
ATE497020T1 AT06752497T AT06752497T ATE497020T1 AT E497020 T1 ATE497020 T1 AT E497020T1 AT 06752497 T AT06752497 T AT 06752497T AT 06752497 T AT06752497 T AT 06752497T AT E497020 T1 ATE497020 T1 AT E497020T1
Authority
AT
Austria
Prior art keywords
dna
tags
polymorphism
populations
collection
Prior art date
Application number
AT06752497T
Other languages
English (en)
Inventor
Eric Johnson
Guowen Liu
Michael Miller
Original Assignee
State Of Oregon Acting By & Through The State Board Of Higher Eduction On Behalf Of The University O
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
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First worldwide family litigation filed litigation Critical https://patents.darts-ip.com/?family=36997839&utm_source=google_patent&utm_medium=platform_link&utm_campaign=public_patent_search&patent=ATE497020(T1) "Global patent litigation dataset” by Darts-ip is licensed under a Creative Commons Attribution 4.0 International License.
Application filed by State Of Oregon Acting By & Through The State Board Of Higher Eduction On Behalf Of The University O filed Critical State Of Oregon Acting By & Through The State Board Of Higher Eduction On Behalf Of The University O
Application granted granted Critical
Publication of ATE497020T1 publication Critical patent/ATE497020T1/de

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Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813—Hybridisation assays
    • C12Q1/6827—Hybridisation assays for detection of mutation or polymorphism
    • C12Q1/683—Hybridisation assays for detection of mutation or polymorphism involving restriction enzymes, e.g. restriction fragment length polymorphism [RFLP]

Landscapes

  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Biochemistry (AREA)
  • Physics & Mathematics (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Analytical Chemistry (AREA)
  • Immunology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
AT06752497T 2005-05-10 2006-05-10 Verfahren zur kartierung von polymorphismen und polymorphismus-mikroarrays ATE497020T1 (de)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US67969305P 2005-05-10 2005-05-10
US78242406P 2006-03-14 2006-03-14
PCT/US2006/018150 WO2006122215A2 (en) 2005-05-10 2006-05-10 Methods of mapping polymorphisms and polymorphism microarrays

Publications (1)

Publication Number Publication Date
ATE497020T1 true ATE497020T1 (de) 2011-02-15

Family

ID=36997839

Family Applications (1)

Application Number Title Priority Date Filing Date
AT06752497T ATE497020T1 (de) 2005-05-10 2006-05-10 Verfahren zur kartierung von polymorphismen und polymorphismus-mikroarrays

Country Status (9)

Country Link
US (1) US9365893B2 (de)
EP (1) EP1885882B1 (de)
AT (1) ATE497020T1 (de)
AU (1) AU2006244042B2 (de)
CA (1) CA2612145A1 (de)
DE (1) DE602006019855D1 (de)
DK (1) DK1885882T3 (de)
NZ (1) NZ564095A (de)
WO (1) WO2006122215A2 (de)

Families Citing this family (14)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2006122215A2 (en) 2005-05-10 2006-11-16 State Of Oregon Acting By & Through The State Board Of Higher Education On Behalf Of The University Of Oregon Methods of mapping polymorphisms and polymorphism microarrays
DK2302070T3 (da) 2005-06-23 2012-11-26 Keygene Nv Strategier til identifikation og detektion af polymorfismer med højt gennemløb
US10316364B2 (en) 2005-09-29 2019-06-11 Keygene N.V. Method for identifying the source of an amplicon
WO2007037678A2 (en) 2005-09-29 2007-04-05 Keygene N.V. High throughput screening of mutagenized populations
CN103937899B (zh) 2005-12-22 2017-09-08 凯津公司 用于基于aflp的高通量多态性检测的方法
EP3239304B1 (de) 2006-04-04 2020-08-19 Keygene N.V. Nachweis von molekularmarkern mit hohem durchsatz auf der basis von aflp und mit hoher durchsatzsequenzierung
US9271455B2 (en) 2007-05-31 2016-03-01 Monsanto Technology Llc Soybean polymorphisms and methods of genotyping
CA2803940C (en) * 2010-06-30 2019-07-02 Bgi Genomics Co., Ltd. Application of a pcr sequencing method, based on dna barcoding technique and dna incomplete shearing strategy, in hla genotyping
CN102560688B (zh) * 2010-12-15 2013-11-20 深圳华大基因科技服务有限公司 一种新的基于illumina测序平台的文库构建方法
KR102662493B1 (ko) * 2019-05-10 2024-04-30 더 차이니즈 유니버시티 오브 홍콩 중합효소를 사용하여 부위를 연결시키는 프라이머 및 검정
CN112575102B (zh) * 2020-12-11 2022-08-30 武汉市农业科学院 控制莲心皮数的主效qtl、snp分子标记、kasp检测引物组及应用
CN113755631B (zh) * 2021-09-29 2024-05-24 石家庄博瑞迪生物技术有限公司 一种基于mSNP技术检测西葫芦种子纯度的混样检测方法
CN117965794B (zh) * 2024-02-29 2024-09-13 云南省农业科学院质量标准与检测技术研究所 香石竹品种鉴定的特异性snp分子标记组合及应用
CN118308513B (zh) * 2024-04-03 2025-06-24 海南省农业科学院热带园艺研究所 一种越南油茶资源SNP和InDel分子标记的多态性引物开发及其应用方法

Family Cites Families (37)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US4794075A (en) * 1985-08-29 1988-12-27 Lifecodes Corporation Method for locating and purifying DNA containing single base mismatches
US7026115B1 (en) * 1991-09-24 2006-04-11 Keygene N.V. Selective restriction fragment amplification: fingerprinting
AU672760B2 (en) * 1991-09-24 1996-10-17 Keygene N.V. Selective restriction fragment amplification: a general method for DNA fingerprinting
US5750335A (en) * 1992-04-24 1998-05-12 Massachusetts Institute Of Technology Screening for genetic variation
GB9214873D0 (en) 1992-07-13 1992-08-26 Medical Res Council Process for categorising nucleotide sequence populations
US6468742B2 (en) * 1993-11-01 2002-10-22 Nanogen, Inc. Methods for determination of single nucleic acid polymorphisms using bioelectronic microchip
US6110709A (en) 1994-03-18 2000-08-29 The General Hospital Corporation Cleaved amplified modified polymorphic sequence detection methods
AU693198B2 (en) * 1994-04-25 1998-06-25 Avitech Diagnostics, Inc. Detection of mutation by resolvase cleavage
US5723320A (en) * 1995-08-29 1998-03-03 Dehlinger; Peter J. Position-addressable polynucleotide arrays
US5922535A (en) * 1995-11-07 1999-07-13 Huo; Li Identifying sequence differences in nucleic acid populations
TW304626U (en) * 1996-06-26 1997-05-01 United Microelectronics Corp Ceramic ring structure to guide the chip to slide down to the bottom electrode in a dry etcher
US5726022A (en) * 1996-11-18 1998-03-10 Lifespan Biosciences, Inc. Subtractive hybridization and capture methods and kits for differential isolation of nucleic acids including disease-associated sequences
WO1999023256A1 (en) 1997-10-30 1999-05-14 Cold Spring Harbor Laboratory Probe arrays and methods of using probe arrays for distinguishing dna
CA2352476A1 (en) * 1998-12-04 2000-06-15 Keygene N.V. Array and method for analysing nucleic acid sequences
EP1024201B1 (de) 1999-01-27 2003-11-26 Commissariat A L'energie Atomique Microassay zur Serienanalyse der Genexpression und Anwendungen davon
US7135284B1 (en) * 1999-02-05 2006-11-14 Integrated Dna Technologies, Inc. Primer extension methods for production of high specific activity nucleic acid probes
CA2372131A1 (en) 1999-02-22 2000-08-31 Sydney Brenner Polymorphic dna fragments and uses thereof
JP2002538837A (ja) 1999-03-12 2002-11-19 アマシャム バイオサイエンス ユーケイ リミテッド 遺伝分析
WO2001049882A2 (en) * 1999-12-29 2001-07-12 Keygene N.V. METHOD FOR GENERATING OLIGONUCLEOTIDES, IN PARTICULAR FOR THE DETECTION OF AMPLIFIED RESTRICTION FRAGMENTS OBTAINED USING AFLP$m(3)
AU6052001A (en) * 2000-03-29 2001-10-08 Ct For The Applic Of Molecular Methods for genotyping by hybridization analysis
EP1282729A2 (de) * 2000-05-15 2003-02-12 Keygene N.V. Mikrosatelliten-aflp
US6934408B2 (en) * 2000-08-25 2005-08-23 Amnis Corporation Method and apparatus for reading reporter labeled beads
US20020146723A1 (en) * 2000-10-25 2002-10-10 Krontiris Theodore G. Candidate region mismatch scanning for genotyping and mutation detection
WO2002034949A2 (en) * 2000-10-27 2002-05-02 Molecular Staging Inc. Methods for identifying genes associated with diseases or specific phenotypes
US6783943B2 (en) * 2000-12-20 2004-08-31 The Regents Of The University Of California Rolling circle amplification detection of RNA and DNA
JP2004526453A (ja) 2001-04-16 2004-09-02 アプレラ コーポレイション ヌクレオチド分析のための方法および組成物
US20050064406A1 (en) * 2001-04-20 2005-03-24 Eugene Zabarovsky Methods for high throughput genome analysis using restriction site tagged microarrays
US6799122B2 (en) * 2001-08-31 2004-09-28 Conagra Grocery Products Company Method for identifying polymorphic markers in a population
US20030186279A1 (en) * 2002-03-28 2003-10-02 Affymetrix, Inc. Large scale genotyping methods
US20070065816A1 (en) 2002-05-17 2007-03-22 Affymetrix, Inc. Methods for genotyping
US7141371B2 (en) * 2002-09-06 2006-11-28 State Of Oregon Acting By And Through The State Board Of Higher Education On Behalf Of The University Of Oregon Methods for detecting and localizing DNA mutations by microarray
EP1578994A2 (de) 2002-11-11 2005-09-28 Affymetrix, Inc. Verfahren zur erkennung von änderungen der dna-kopienanzahl
CA2513899C (en) * 2003-01-29 2013-03-26 454 Corporation Methods of amplifying and sequencing nucleic acids
WO2006122215A2 (en) 2005-05-10 2006-11-16 State Of Oregon Acting By & Through The State Board Of Higher Education On Behalf Of The University Of Oregon Methods of mapping polymorphisms and polymorphism microarrays
DK2302070T3 (da) 2005-06-23 2012-11-26 Keygene Nv Strategier til identifikation og detektion af polymorfismer med højt gennemløb
US20070172839A1 (en) 2006-01-24 2007-07-26 Smith Douglas R Asymmetrical adapters and methods of use thereof
EP3239304B1 (de) 2006-04-04 2020-08-19 Keygene N.V. Nachweis von molekularmarkern mit hohem durchsatz auf der basis von aflp und mit hoher durchsatzsequenzierung

Also Published As

Publication number Publication date
EP1885882B1 (de) 2011-01-26
WO2006122215A2 (en) 2006-11-16
AU2006244042B2 (en) 2010-07-29
US9365893B2 (en) 2016-06-14
NZ564095A (en) 2009-06-26
CA2612145A1 (en) 2006-11-16
US20080194418A1 (en) 2008-08-14
EP1885882A2 (de) 2008-02-13
AU2006244042A1 (en) 2006-11-16
DK1885882T3 (da) 2011-04-11
DE602006019855D1 (de) 2011-03-10
WO2006122215A3 (en) 2007-03-22

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