ATE513925T1 - Verfahren zum de-novo-nachweis von sequenzen in nukleinsäuren: zielsequenzierung durch fragmentierung - Google Patents

Verfahren zum de-novo-nachweis von sequenzen in nukleinsäuren: zielsequenzierung durch fragmentierung

Info

Publication number
ATE513925T1
ATE513925T1 AT05733836T AT05733836T ATE513925T1 AT E513925 T1 ATE513925 T1 AT E513925T1 AT 05733836 T AT05733836 T AT 05733836T AT 05733836 T AT05733836 T AT 05733836T AT E513925 T1 ATE513925 T1 AT E513925T1
Authority
AT
Austria
Prior art keywords
nucleic acid
sequences
sequence
fragmentation
target
Prior art date
Application number
AT05733836T
Other languages
English (en)
Inventor
Charles Cantor
Fouad Siddiqi
Original Assignee
Univ Boston
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Univ Boston filed Critical Univ Boston
Application granted granted Critical
Publication of ATE513925T1 publication Critical patent/ATE513925T1/de

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing
    • C12Q1/6872—Methods for sequencing involving mass spectrometry

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Zoology (AREA)
  • Physics & Mathematics (AREA)
  • Wood Science & Technology (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Analytical Chemistry (AREA)
  • Immunology (AREA)
  • Microbiology (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
AT05733836T 2004-04-09 2005-04-08 Verfahren zum de-novo-nachweis von sequenzen in nukleinsäuren: zielsequenzierung durch fragmentierung ATE513925T1 (de)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US56328304P 2004-04-09 2004-04-09
US56528404P 2004-04-26 2004-04-26
PCT/US2005/011812 WO2005100607A1 (en) 2004-04-09 2005-04-08 Method for de novo detection of sequences in nucleic acids:target sequencing by fragmentation

Publications (1)

Publication Number Publication Date
ATE513925T1 true ATE513925T1 (de) 2011-07-15

Family

ID=35150018

Family Applications (1)

Application Number Title Priority Date Filing Date
AT05733836T ATE513925T1 (de) 2004-04-09 2005-04-08 Verfahren zum de-novo-nachweis von sequenzen in nukleinsäuren: zielsequenzierung durch fragmentierung

Country Status (7)

Country Link
US (2) US7470517B2 (de)
EP (1) EP1740719B1 (de)
CN (1) CN1977053A (de)
AT (1) ATE513925T1 (de)
AU (2) AU2005233598B2 (de)
CA (1) CA2562557A1 (de)
WO (1) WO2005100607A1 (de)

Families Citing this family (14)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US7470517B2 (en) * 2004-04-09 2008-12-30 Trustees Of Boston University Method for de novo detection of sequences in nucleic acids: target sequencing by fragmentation
DK1907571T3 (en) 2005-06-15 2017-08-21 Complete Genomics Inc NUCLEIC ACID ANALYSIS USING INCIDENTAL MIXTURES OF NON-OVERLAPPING FRAGMENTS
WO2008128111A1 (en) * 2007-04-13 2008-10-23 Sequenom, Inc. Comparative sequence analysis processes and systems
CA2687218A1 (en) * 2007-05-14 2008-11-27 Insight Genetics, Inc. Methods of screening nucleic acids for single nucleotide variations
US8592150B2 (en) 2007-12-05 2013-11-26 Complete Genomics, Inc. Methods and compositions for long fragment read sequencing
CN101251510B (zh) * 2008-03-14 2012-06-06 毅新兴业（北京）科技有限公司 一种联合限制性酶切法和质谱法以检测snp的方法
CN101251511B (zh) * 2008-03-14 2012-06-06 毅新兴业（北京）科技有限公司 一种利用限制性内切酶双酶切检测snp的方法
CN101246142B (zh) * 2008-04-03 2012-06-20 毅新兴业（北京）科技有限公司 一种检测单核苷酸多态性的方法
US9524369B2 (en) 2009-06-15 2016-12-20 Complete Genomics, Inc. Processing and analysis of complex nucleic acid sequence data
WO2011137368A2 (en) 2010-04-30 2011-11-03 Life Technologies Corporation Systems and methods for analyzing nucleic acid sequences
US9268903B2 (en) 2010-07-06 2016-02-23 Life Technologies Corporation Systems and methods for sequence data alignment quality assessment
US20160153060A1 (en) * 2013-07-09 2016-06-02 Tech-Knowhow Corp. Method for species identification by using molecular weights of nucleic acid cleavage fragments
CN103667491A (zh) * 2013-12-13 2014-03-26 中国科学院苏州生物医学工程技术研究所 一种核酸测序方法
WO2019116346A1 (en) * 2017-12-15 2019-06-20 Novartis Ag Polya tail length analysis of rna by mass spectrometry

Family Cites Families (16)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6610492B1 (en) 1998-10-01 2003-08-26 Variagenics, Inc. Base-modified nucleotides and cleavage of polynucleotides incorporating them
US6566059B1 (en) 1998-10-01 2003-05-20 Variagenics, Inc. Method for analyzing polynucleotides
US6458945B1 (en) 1998-10-01 2002-10-01 Variagenics, Inc. Method for analyzing polynucleotides
AU779112B2 (en) 1999-04-30 2005-01-06 Sequenom, Inc. Diagnostic sequencing by a combination of specific cleavage and mass spectrometry
IL148344A0 (en) 1999-09-01 2002-09-12 Yeda Res & Dev Template-dependent nucleic acid polymerization using oligonucleotide triphosphate building blocks
US6287778B1 (en) 1999-10-19 2001-09-11 Affymetrix, Inc. Allele detection using primer extension with sequence-coded identity tags
GB9929381D0 (en) 1999-12-10 2000-02-09 Pyrosequencing Ab A method of assessing the amount of nucleic acid in a sample
US6660229B2 (en) 2000-06-13 2003-12-09 The Trustees Of Boston University Use of nucleotide analogs in the analysis of oligonucleotide mixtures and in highly multiplexed nucleic acid sequencing
AU2003215083A1 (en) * 2002-02-06 2003-09-02 Tethys Bioscience, Inc. Method and apparatus for validating dna sequences without sequencing
US8034567B2 (en) 2002-09-06 2011-10-11 Trustees Of Boston University Quantification of gene expression
US7700325B2 (en) 2003-01-17 2010-04-20 Trustees Of Boston University Haplotype analysis
WO2005023091A2 (en) 2003-09-05 2005-03-17 The Trustees Of Boston University Method for non-invasive prenatal diagnosis
JP2007508017A (ja) 2003-10-08 2007-04-05 ザ トラスティーズ オブ ボストン ユニバーシティ 染色体異常の出生前診断のための方法
EP1721014B1 (de) 2004-02-18 2013-07-17 Trustees Of Boston University Verfahren zum nachweis und zur quantifizierung seltener mutationen
US7470517B2 (en) 2004-04-09 2008-12-30 Trustees Of Boston University Method for de novo detection of sequences in nucleic acids: target sequencing by fragmentation
US7901208B2 (en) * 2006-10-20 2011-03-08 Ultradent Products, Inc. Chemically impregnated absorbent gingival retraction cord comprising silk

Also Published As

Publication number Publication date
AU2005233598B2 (en) 2010-09-30
AU2010212334A1 (en) 2010-09-09
US7470517B2 (en) 2008-12-30
CN1977053A (zh) 2007-06-06
EP1740719A1 (de) 2007-01-10
HK1098794A1 (en) 2007-07-27
US20090075288A1 (en) 2009-03-19
EP1740719A4 (de) 2008-03-05
AU2005233598A1 (en) 2005-10-27
CA2562557A1 (en) 2005-10-27
EP1740719B1 (de) 2011-06-22
US20080096194A1 (en) 2008-04-24
US7807375B2 (en) 2010-10-05
WO2005100607A1 (en) 2005-10-27

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