CA2352476A1 - Arrangement et procede d'analyse de sequences d'acides nucleiques - Google Patents

Arrangement et procede d'analyse de sequences d'acides nucleiques Download PDF

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Publication number
CA2352476A1
CA2352476A1 CA002352476A CA2352476A CA2352476A1 CA 2352476 A1 CA2352476 A1 CA 2352476A1 CA 002352476 A CA002352476 A CA 002352476A CA 2352476 A CA2352476 A CA 2352476A CA 2352476 A1 CA2352476 A1 CA 2352476A1
Authority
CA
Canada
Prior art keywords
array
nucleic acid
aflp
markers
acid sequence
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Abandoned
Application number
CA002352476A
Other languages
English (en)
Inventor
Petrus Antonius Josephina Vos
Michael Josephus Theresia Van Eijk
Rene Cornelis Josephus Hogers
Leo Heijnen
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Keygene NV
Original Assignee
Individual
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Individual filed Critical Individual
Publication of CA2352476A1 publication Critical patent/CA2352476A1/fr
Abandoned legal-status Critical Current

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Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813—Hybridisation assays
    • C12Q1/6827—Hybridisation assays for detection of mutation or polymorphism
    • C12Q1/683—Hybridisation assays for detection of mutation or polymorphism involving restriction enzymes, e.g. restriction fragment length polymorphism [RFLP]
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813—Hybridisation assays
    • C12Q1/6834—Enzymatic or biochemical coupling of nucleic acids to a solid phase
    • C12Q1/6837—Enzymatic or biochemical coupling of nucleic acids to a solid phase using probe arrays or probe chips

Landscapes

  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Biochemistry (AREA)
  • Physics & Mathematics (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Analytical Chemistry (AREA)
  • Immunology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)

Abstract

L'invention concerne un arrangement servant à analyser une séquence d'acides nucléiques ou un mélange de séquences d'acides nucléiques. Cet arrangement comprend : a) un support, et b) au moins deux séquences d'acides nucléiques différentes, liées audit support, chaque séquence liée comprenant au moins une séquence d'acides nucléiques correspondant à la séquence d'un fragment de restriction que l'on peut obtenir par restriction d'un ADN génomique et/ou d'au moins un ADNc avec au moins une enzyme de restriction à points de coupure fréquents et au moins une enzyme de restriction à point de coupure rare. Cet arrangement comprend, de préférence, au moins 10, préférablement au moins 100, et idéalement au moins 1000 séquences d'acides nucléiques différentes liées au support. En outre, cet arrangement comprend plusieurs marqueurs AFLP~ pris à partir d'un individu ou d'un groupe d'individus apparentés. L'invention concerne également un procédé de préparation de séquences d'acides nucléiques, et notamment de marqueurs AFLP~, utiles dans un tel arrangement, de même que des procédés d'analyse d'une séquence d'acides nucléiques ou d'un mélange de séquences d'acides nucléiques au moyen d'un tel arrangement. Enfin, l'invention concerne une trousse d'éléments comprenant notamment l'arrangement de l'invention, de même que des données obtenues au moyen de cet arrangement.
CA002352476A 1998-12-04 1999-12-03 Arrangement et procede d'analyse de sequences d'acides nucleiques Abandoned CA2352476A1 (fr)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
EP98204114 1998-12-04
EP98204114.7 1998-12-04
PCT/NL1999/000743 WO2000034518A1 (fr) 1998-12-04 1999-12-03 Arrangement et procede d'analyse de sequences d'acides nucleiques

Publications (1)

Publication Number Publication Date
CA2352476A1 true CA2352476A1 (fr) 2000-06-15

Family

ID=8234431

Family Applications (1)

Application Number Title Priority Date Filing Date
CA002352476A Abandoned CA2352476A1 (fr) 1998-12-04 1999-12-03 Arrangement et procede d'analyse de sequences d'acides nucleiques

Country Status (6)

Country Link
EP (1) EP1135524A1 (fr)
JP (1) JP2002532070A (fr)
AU (1) AU1696800A (fr)
CA (1) CA2352476A1 (fr)
IL (1) IL143486A0 (fr)
WO (1) WO2000034518A1 (fr)

Families Citing this family (7)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2000061801A2 (fr) * 1999-04-09 2000-10-19 Keygene N.V. METHODE DE DETECTION ET/OU D'ANALYSE, AU MOYEN DE TECHNIQUES D'EXTENSION D'AMORCES, DE POLYMORPHISMES NUCLEOTIDIQUES UNIQUES DANS DES FRAGMENTS DE RESTRICTION, ET NOTAMMENT DANS DES FRAGMENTS DE RESTRICTION AMPLIFIES GENERES PAR AFLP$m(3)
ATE317024T1 (de) * 1999-12-29 2006-02-15 Keygene Nv Verfahren zur erzeugung von oligonukleotiden, im besonderen zur detektion amplifizierter restriktionsfragmente, die durch aflp erhalten wurden
MXPA02009431A (es) * 2000-03-29 2005-08-26 Cambia Metodos para la genotipificacion mediante analisis de hibridacion.
US6713258B2 (en) * 2000-03-29 2004-03-30 Center For The Application Of Molecular Biology To International Agriculture (Cambia) Methods for genotyping by hybridization analysis
US7141371B2 (en) 2002-09-06 2006-11-28 State Of Oregon Acting By And Through The State Board Of Higher Education On Behalf Of The University Of Oregon Methods for detecting and localizing DNA mutations by microarray
DK1885882T3 (da) * 2005-05-10 2011-04-11 State Of Oregon Acting By & Through The State Board Of Higher Eduction On Behalf Of The University O Fremgangsmåder til kortlægning af polymorfier og polymorfi-mikroarray
JP5799484B2 (ja) * 2009-12-14 2015-10-28 トヨタ自動車株式会社 Ｄｎａマイクロアレイにおけるプローブ設計方法、当該方法により設計されたプローブを有するｄｎａマイクロアレイ

Family Cites Families (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP0804618B1 (fr) * 1994-11-28 1999-01-27 E.I. Du Pont De Nemours And Company Sondes de microsatellites composes pour la detection de polymorphismes genetiques
JP2002515738A (ja) * 1996-01-23 2002-05-28 アフィメトリックス，インコーポレイティド 核酸分析法
EP1007730A4 (fr) * 1996-08-30 2004-04-28 Invitrogen Corp PROCEDES D'IDENTIFICATION ET D'ISOLEMENT DE SEQUENCES DE NUCLEOTIDES SPECIFIQUES DANS L'ADNc ET L'ADN GENOMIQUE
JP2001521754A (ja) * 1997-10-30 2001-11-13 コールド スプリング ハーバー ラボラトリー Ｄｎａ識別のためのプローブアレイ及びプローブアレイの使用方法

Also Published As

Publication number Publication date
EP1135524A1 (fr) 2001-09-26
JP2002532070A (ja) 2002-10-02
AU1696800A (en) 2000-06-26
IL143486A0 (en) 2002-04-21
WO2000034518A1 (fr) 2000-06-15

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Legal Events

Date Code Title Description
FZDE Discontinued
FZDE Discontinued

Effective date: 20041203