CL2021001409A1 - Sistemas y métodos para facilitar la selección de clones - Google Patents

Sistemas y métodos para facilitar la selección de clones

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Publication number
CL2021001409A1
CL2021001409A1 CL2021001409A CL2021001409A CL2021001409A1 CL 2021001409 A1 CL2021001409 A1 CL 2021001409A1 CL 2021001409 A CL2021001409 A CL 2021001409A CL 2021001409 A CL2021001409 A CL 2021001409A CL 2021001409 A1 CL2021001409 A1 CL 2021001409A1
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CL
Chile
Prior art keywords
image
processor
colony
analyzing
cell
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CL2021001409A
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English (en)
Inventor
Graham F Milne
Yu Yuan
Tony Y Wang
Kim H Le
Glenn Tan
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Amgen Inc
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Publication date
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Publication of CL2021001409A1 publication Critical patent/CL2021001409A1/es

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    • GPHYSICS
    • G06COMPUTING OR CALCULATING; COUNTING
    • G06VIMAGE OR VIDEO RECOGNITION OR UNDERSTANDING
    • G06V20/00Scenes; Scene-specific elements
    • G06V20/60Type of objects
    • G06V20/69Microscopic objects, e.g. biological cells or cellular parts
    • G06V20/695Preprocessing, e.g. image segmentation
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N21/00Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
    • G01N21/62Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light
    • G01N21/63Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light optically excited
    • G01N21/64Fluorescence; Phosphorescence
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N5/00Undifferentiated human, animal or plant cells, e.g. cell lines; Tissues; Cultivation or maintenance thereof; Culture media therefor
    • C12N5/0018Culture media for cell or tissue culture
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N5/00Undifferentiated human, animal or plant cells, e.g. cell lines; Tissues; Cultivation or maintenance thereof; Culture media therefor
    • C12N5/0068General culture methods using substrates
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N15/00Investigating characteristics of particles; Investigating permeability, pore-volume or surface-area of porous materials
    • G01N15/10Investigating individual particles
    • G01N15/14Optical investigation techniques, e.g. flow cytometry
    • G01N15/1404Handling flow, e.g. hydrodynamic focusing
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/5005Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving human or animal cells
    • GPHYSICS
    • G06COMPUTING OR CALCULATING; COUNTING
    • G06FELECTRIC DIGITAL DATA PROCESSING
    • G06F18/00Pattern recognition
    • G06F18/20Analysing
    • G06F18/24Classification techniques
    • G06F18/241Classification techniques relating to the classification model, e.g. parametric or non-parametric approaches
    • G06F18/2413Classification techniques relating to the classification model, e.g. parametric or non-parametric approaches based on distances to training or reference patterns
    • GPHYSICS
    • G06COMPUTING OR CALCULATING; COUNTING
    • G06NCOMPUTING ARRANGEMENTS BASED ON SPECIFIC COMPUTATIONAL MODELS
    • G06N3/00Computing arrangements based on biological models
    • G06N3/02Neural networks
    • G06N3/04Architecture, e.g. interconnection topology
    • GPHYSICS
    • G06COMPUTING OR CALCULATING; COUNTING
    • G06NCOMPUTING ARRANGEMENTS BASED ON SPECIFIC COMPUTATIONAL MODELS
    • G06N3/00Computing arrangements based on biological models
    • G06N3/02Neural networks
    • G06N3/04Architecture, e.g. interconnection topology
    • G06N3/0464Convolutional networks [CNN, ConvNet]
    • GPHYSICS
    • G06COMPUTING OR CALCULATING; COUNTING
    • G06NCOMPUTING ARRANGEMENTS BASED ON SPECIFIC COMPUTATIONAL MODELS
    • G06N3/00Computing arrangements based on biological models
    • G06N3/02Neural networks
    • G06N3/08Learning methods
    • G06N3/09Supervised learning
    • GPHYSICS
    • G06COMPUTING OR CALCULATING; COUNTING
    • G06VIMAGE OR VIDEO RECOGNITION OR UNDERSTANDING
    • G06V10/00Arrangements for image or video recognition or understanding
    • G06V10/70Arrangements for image or video recognition or understanding using pattern recognition or machine learning
    • G06V10/764Arrangements for image or video recognition or understanding using pattern recognition or machine learning using classification, e.g. of video objects
    • GPHYSICS
    • G06COMPUTING OR CALCULATING; COUNTING
    • G06VIMAGE OR VIDEO RECOGNITION OR UNDERSTANDING
    • G06V10/00Arrangements for image or video recognition or understanding
    • G06V10/70Arrangements for image or video recognition or understanding using pattern recognition or machine learning
    • G06V10/82Arrangements for image or video recognition or understanding using pattern recognition or machine learning using neural networks
    • GPHYSICS
    • G06COMPUTING OR CALCULATING; COUNTING
    • G06VIMAGE OR VIDEO RECOGNITION OR UNDERSTANDING
    • G06V20/00Scenes; Scene-specific elements
    • G06V20/60Type of objects
    • G06V20/69Microscopic objects, e.g. biological cells or cellular parts
    • G06V20/693Acquisition
    • GPHYSICS
    • G06COMPUTING OR CALCULATING; COUNTING
    • G06VIMAGE OR VIDEO RECOGNITION OR UNDERSTANDING
    • G06V20/00Scenes; Scene-specific elements
    • G06V20/60Type of objects
    • G06V20/69Microscopic objects, e.g. biological cells or cellular parts
    • G06V20/698Matching; Classification

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  • Engineering & Computer Science (AREA)
  • Theoretical Computer Science (AREA)
  • Health & Medical Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Physics & Mathematics (AREA)
  • General Physics & Mathematics (AREA)
  • General Health & Medical Sciences (AREA)
  • Biomedical Technology (AREA)
  • Evolutionary Computation (AREA)
  • Multimedia (AREA)
  • Molecular Biology (AREA)
  • Artificial Intelligence (AREA)
  • Software Systems (AREA)
  • Computing Systems (AREA)
  • Data Mining & Analysis (AREA)
  • Computer Vision & Pattern Recognition (AREA)
  • Chemical & Material Sciences (AREA)
  • General Engineering & Computer Science (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Medical Informatics (AREA)
  • Databases & Information Systems (AREA)
  • Biotechnology (AREA)
  • Immunology (AREA)
  • Biochemistry (AREA)
  • Genetics & Genomics (AREA)
  • Wood Science & Technology (AREA)
  • Zoology (AREA)
  • Organic Chemistry (AREA)
  • Computational Linguistics (AREA)
  • Biophysics (AREA)
  • Mathematical Physics (AREA)
  • Evolutionary Biology (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Cell Biology (AREA)
  • Microbiology (AREA)
  • Analytical Chemistry (AREA)
  • Pathology (AREA)
  • Urology & Nephrology (AREA)
  • Hematology (AREA)
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Abstract

Un método para facilitar la selección de clones incluye generar imágenes de secuencia de tiempo de un pocillo que contiene un medio, que incluyen una primera imagen y una segunda imagen posterior. El método también incluye detectar, por uno o más procesadores que analizan la primera imagen, uno o más objetos candidatos representados en la primera imagen y, para cada uno de los objetos candidatos, determinar si el objeto es una célula individual analizando una imagen del objeto usando una red neuronal convolucional. El método incluye adicionalmente detectar, analizando la segunda imagen con el procesador o procesadores, una colonia de células representada en la segunda imagen, y determinar, por el procesador o procesadores, si la colonia se formó a partir de únicamente una célula basándose al menos en si se determinó que cada objeto candidato era una célula individual. El método incluye adicionalmente generar, por el procesador o procesadores, datos de salida que indican si la colonia se formó a partir de únicamente una célula.
CL2021001409A 2018-11-30 2021-05-28 Sistemas y métodos para facilitar la selección de clones CL2021001409A1 (es)

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
US201862774154P 2018-11-30 2018-11-30

Publications (1)

Publication Number Publication Date
CL2021001409A1 true CL2021001409A1 (es) 2021-11-12

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Application Number Title Priority Date Filing Date
CL2021001409A CL2021001409A1 (es) 2018-11-30 2021-05-28 Sistemas y métodos para facilitar la selección de clones

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US (1) US12561992B2 (es)
EP (1) EP3888004B1 (es)
JP (2) JP7789560B2 (es)
KR (1) KR20210099028A (es)
CN (1) CN113168519A (es)
AU (1) AU2019387079B2 (es)
BR (1) BR112021010404A2 (es)
CA (1) CA3120281A1 (es)
CL (1) CL2021001409A1 (es)
EA (1) EA202191499A1 (es)
IL (1) IL283577B2 (es)
MX (1) MX2021005938A (es)
SG (1) SG11202105399RA (es)
WO (1) WO2020112723A1 (es)

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KR20220073738A (ko) * 2019-08-30 2022-06-03 주노 쎄러퓨티크스 인코퍼레이티드 세포 분류를 위한 기계 학습 방법
EP4115388A1 (en) 2020-03-06 2023-01-11 Amgen Inc. Systems and methods for assessing cell growth rates
US12183119B2 (en) * 2021-04-12 2024-12-31 Bitsensing Inc. Face identification using millimeter-wave radar sensor data
JPWO2024161784A1 (es) 2023-01-30 2024-08-08
WO2024161783A1 (ja) 2023-01-30 2024-08-08 富士フイルム株式会社 学習支援装置、学習支援装置の作動方法、および学習支援装置の作動プログラム
WO2024242686A1 (en) * 2023-05-24 2024-11-28 Wyatt Technology, Llc Detecting bubbles in images of a sample in a well plate

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ES2104699T3 (es) 1990-03-30 1997-10-16 Neuromedical Systems Inc Metodo y sistema automatizados de clasificar una muestra citologica.
DE19616997A1 (de) 1996-04-27 1997-10-30 Boehringer Mannheim Gmbh Verfahren zur automatisierten mikroskopunterstützten Untersuchung von Gewebeproben oder Körperflüssigkeitsproben
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EP2739937B1 (en) 2011-08-02 2023-03-01 The Regents of The University of California Rapid, massively parallel single-cell drug response measurements via live cell interferometry
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ES2772300T3 (es) * 2015-06-02 2020-07-07 Baxalta Inc Método para recoger una colonia de células
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Also Published As

Publication number Publication date
AU2019387079B2 (en) 2024-08-01
JP2022509201A (ja) 2022-01-20
SG11202105399RA (en) 2021-06-29
IL283577A (en) 2021-07-29
MX2021005938A (es) 2021-06-30
IL283577B1 (en) 2025-12-01
BR112021010404A2 (pt) 2021-08-24
JP7789560B2 (ja) 2025-12-22
CN113168519A (zh) 2021-07-23
EP3888004A1 (en) 2021-10-06
AU2019387079A1 (en) 2021-06-03
WO2020112723A1 (en) 2020-06-04
CA3120281A1 (en) 2020-06-04
EP3888004B1 (en) 2026-03-18
EA202191499A1 (ru) 2021-08-20
US12561992B2 (en) 2026-02-24
IL283577B2 (en) 2026-04-01
US20220012465A1 (en) 2022-01-13
KR20210099028A (ko) 2021-08-11
JP2025013804A (ja) 2025-01-28

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