CN107619829B - The method that GINS2 gene knockouts are carried out to mescenchymal stem cell using CRISPR-CAS systems - Google Patents
The method that GINS2 gene knockouts are carried out to mescenchymal stem cell using CRISPR-CAS systems Download PDFInfo
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Abstract
本发明提供了一种采用CRISPR‑cas9系统针对间充质干细胞进行GINS2基因编辑,特别是涉及一种构建GINS2基因敲除的间充质干细胞细胞系的建立。其中使用了新的增效蛋白CREnhancer1.0,能够显著提高细胞内CRISPR/Cas9基因编辑效率。本发明提供的骨髓间充质干细胞GINS2敲除质粒具有较好的遗传稳定性。The present invention provides a GINS2 gene editing method for mesenchymal stem cells using a CRISPR-cas9 system, and in particular relates to the establishment of a GINS2 gene knockout mesenchymal stem cell line. Among them, the new enhancer protein CREnhancer1.0 is used, which can significantly improve the efficiency of CRISPR/Cas9 gene editing in cells. The bone marrow mesenchymal stem cell GINS2 knockout plasmid provided by the invention has better genetic stability.
Description
技术领域technical field
本发明提供一种采用CRISPR-cas系统针对间充质干细胞进行GINS2基因编辑,特别是涉及一种构建GINS2基因敲除的间充质干细胞细胞系的建立。The present invention provides a GINS2 gene editing method for mesenchymal stem cells using a CRISPR-cas system, and in particular relates to the establishment of a GINS2 gene knockout mesenchymal stem cell line.
背景技术Background technique
间充质干细胞(mesenchymal stem cells,MSC),是一种具有自我复制能力和多向分化潜能的成体干细胞,这种干细胞能够发育成硬骨、软骨、脂肪和其他类型的细胞。间充质干细胞可以接受移植,而它们会成长为何种类型的细胞取决于其被注入的部位。例如,被注入心脏的间充质干细胞能够形成健康的新组织等。Mesenchymal stem cells (MSCs) are adult stem cells with self-replication ability and multi-directional differentiation potential, which can develop into bone, cartilage, fat and other types of cells. Mesenchymal stem cells can be transplanted, and the type of cells they grow into depends on where they are injected. For example, mesenchymal stem cells injected into the heart can form healthy new tissue, among other things.
间充质干细胞(MSCs)是一类多能干细胞,源于发育早期的中胚层和外胚层。主要存在于结缔组织和器官间质中,以骨髓组织中含量最为丰富,由于骨髓是其主要来源,因此统称为骨髓间充质干细胞。间充质干细胞属于非终末分化细胞,它既有间质细胞,又有内皮细胞及上皮细胞的特征。间充质干细胞在体外特定的诱导条件下,可分化为脂肪、软骨、骨、肌肉、肌腱、神经、肝、心肌、胰岛β细胞和内皮等多种组织细胞,连续传代培养和冷冻保存后仍具有多向分化潜能。不论是自体还是同种异源的间充质干细胞,一般都不会引起宿主的免疫反应。由于间充质干细胞具备的这种免疫学特性,使其在自身免疫性疾病以及各种替代治疗等方面具有广阔的临床应用前景。通过自体移植可以重建组织器官的结构和功能,并且可避免免疫排斥反应。Mesenchymal stem cells (MSCs) are a type of pluripotent stem cells derived from the mesoderm and ectoderm in early development. Mainly exist in connective tissue and interstitium of organs, and the content is most abundant in bone marrow tissue. Since bone marrow is its main source, they are collectively called bone marrow mesenchymal stem cells. Mesenchymal stem cells are non-terminal differentiated cells, which have the characteristics of mesenchymal cells, endothelial cells and epithelial cells. Under specific induction conditions in vitro, mesenchymal stem cells can differentiate into fat, cartilage, bone, muscle, tendon, nerve, liver, myocardium, pancreatic β cells, and endothelial cells. Potential for multidirectional differentiation. Whether autologous or allogeneic mesenchymal stem cells generally do not cause the host's immune response. Due to the immunological characteristics of mesenchymal stem cells, it has broad clinical application prospects in autoimmune diseases and various alternative treatments. The structure and function of tissues and organs can be reconstructed through autologous transplantation, and immune rejection can be avoided.
间充质干细胞的临床研究已经在许多国家开展,美国批准了60余项临床试验,随着间充质干细胞及其相关技术的日益成熟,我国也批准了多项临床试验,走入了间充质干细胞核心技术研发的舞台。我国已经大力加强干细胞研究工作的开展,包括国家昂赛细胞基因工程有限公司、细胞产品国家工程研究中心在内的多家权威研究机构以及各地方脐带血库已将研究技术引向临床。对于间充质干细胞用于治疗十余种难治性疾病的治疗研究,除了用来促进恢复造血,与造血干细胞共移植提高白血病和难治性贫血等以外,还用于心脑血管疾病,肝硬化、骨和肌肉衰退性疾病、脑和脊髓神经损伤、老年痴呆及红斑狼疮和硬皮病等自身免疫性疾病的治疗研究,已经取得的部分临床试验结果令人鼓舞。迄今的研究表明,脐带来源的间充质干细胞不但能够成为骨髓间充质干细胞的理想替代物,而且具有更大的应用潜能。脐带间充质干细胞表达多种胚胎干细胞的特有分子标志,具有分化潜力大、增殖能力强、免疫原性低、取材方便、无道德伦理问题的限制、易于工业化制备等特征,因此有可能成为最具临床应用前景的多能干细胞。Clinical research on mesenchymal stem cells has been carried out in many countries. The United States has approved more than 60 clinical trials. With the maturation of mesenchymal stem cells and related technologies, my country has also approved a number of clinical trials. The stage for the research and development of the core technology of mesenchymal stem cells. my country has vigorously strengthened the development of stem cell research work, and many authoritative research institutions including the National Oncell Cell Gene Engineering Co., Ltd., the National Engineering Research Center for Cell Products, and local cord blood banks have introduced the research technology to the clinic. For the research on the use of mesenchymal stem cells in the treatment of more than ten kinds of refractory diseases, in addition to promoting the recovery of hematopoiesis, co-transplantation with hematopoietic stem cells to improve leukemia and refractory anemia, etc., it is also used for cardiovascular and cerebrovascular diseases, liver Some clinical trial results have been encouraging for research on the treatment of sclerosis, bone and muscle degenerative diseases, brain and spinal cord nerve injuries, Alzheimer's, and autoimmune diseases such as lupus erythematosus and scleroderma. Studies so far have shown that umbilical cord-derived mesenchymal stem cells can not only become an ideal substitute for bone marrow mesenchymal stem cells, but also have greater application potential. Umbilical cord mesenchymal stem cells express a variety of specific molecular markers of embryonic stem cells, and have the characteristics of high differentiation potential, strong proliferation ability, low immunogenicity, convenient material extraction, no restrictions on moral and ethical issues, and easy industrial production. Pluripotent stem cells with clinical application prospects.
GINS2是DNA复制复合体GINS家族成员之一,位于人染色体16q24上,其mRNA长度为1196bp,编码相对分子质量为21000的蛋白质。GINS是一种复制解旋酶,在移动到复制叉前打开DNA双链。研究表明,GINS家族成员在癌症的发生中起一定作用,如GINS家族成员在侵袭性黑色素瘤中过表达,也有文献表明,DNA复制相关蛋白在不同细胞中有不同的作用,如在决定中心体复制数量和疾病发生的不同阶段方面,GINS均发挥了一定功能,特别是与染色体的分离密切相关。GINS2 is a member of the DNA replication complex GINS family, located on human chromosome 16q24, its mRNA length is 1196bp, and it encodes a protein with a relative molecular mass of 21000. GINS is a replicative helicase that unwinds the DNA double strand before moving to the replication fork. Studies have shown that GINS family members play a role in the occurrence of cancer, for example, GINS family members are overexpressed in invasive melanoma, and there are also literatures showing that DNA replication-related proteins have different roles in different cells, such as in determining the centrosome GINS has played a certain role in terms of the number of copies and different stages of disease occurrence, especially closely related to the segregation of chromosomes.
而目前关于GINS2在肿瘤相关领域的报道很少。在CN106620703 A中,针对人GINS2基因的小分子干扰RNA序列,RNA干扰载体和RNA干扰慢病毒,进一步检测了GINS2基因的沉默效率、GINS2-siRNA慢病毒对肿瘤细胞增殖能力和凋亡水平的影响,结果显示采用RNAi方法下调人GINS2基因的表达后可有效抑制肿瘤细胞的增殖和生长并促进其凋亡,表明GINS2基因是原癌基因,可作为肿瘤治疗的靶点,通过RNAi方式沉默GINS2基因的表达可作为抑制肿瘤发展的有效手段。但是在该研究中,采用的是SiRNA进行干扰,所述方法具有敲除不彻底,不能稳定的敲除遗传的缺陷。在(Integration of Genomic,Biologic,and ChemicalApproaches to Target p53 Loss and Gain-of-Function in Triple NegativeBreastCancer)中,虽然提到了CRISPR/Cas可以用于MCM2,GINS2,C19orf43,ELOVL2,ARL4D,DNM3OS,FGFR2,IFIT2,MPPED2,B2M,ERRFI1,GLUL CASP4,CPED1,SPTLC2,CMTM6,CFH,CARS2,SUMF1,但是只是一个构想,并没有实施。针对不同的基因进行CRISPR修饰并非简单容易设计的,需要克服众多障碍,具有极大地实验困难。However, there are few reports about GINS2 in tumor-related fields. In CN106620703 A, aiming at the small molecule interference RNA sequence of human GINS2 gene, RNA interference carrier and RNA interference lentivirus, the silencing efficiency of GINS2 gene and the effect of GINS2-siRNA lentivirus on tumor cell proliferation ability and apoptosis level were further detected , the results showed that down-regulating the expression of human GINS2 gene by RNAi method can effectively inhibit the proliferation and growth of tumor cells and promote their apoptosis, indicating that GINS2 gene is a proto-oncogene and can be used as a target for tumor therapy. GINS2 gene can be silenced by RNAi The expression of can be used as an effective means to inhibit tumor development. However, in this study, siRNA was used for interference, and the method has the defects of incomplete knockout and unstable genetic knockout. In (Integration of Genomic, Biologic, and Chemical Approaches to Target p53 Loss and Gain-of-Function in Triple Negative Breast Cancer), although it is mentioned that CRISPR/Cas can be used for MCM2, GINS2, C19orf43, ELOVL2, ARL4D, DNM3OS, FGFR2, IFIT2 , MPPED2, B2M, ERRFI1, GLUL CASP4, CPED1, SPTLC2, CMTM6, CFH, CARS2, SUMF1, but it is only an idea and has not been implemented. CRISPR modification for different genes is not simple and easy to design, many obstacles need to be overcome, and there are great experimental difficulties.
基于间充质干细胞的多能性,为了研究敲除GINS2基因的间充质干细胞在癌症治疗方面的功能,建立敲除GINS2基因的间充质干细胞细胞系变得尤为重要。Based on the pluripotency of mesenchymal stem cells, in order to study the function of GINS2 gene knockout mesenchymal stem cells in cancer therapy, it is particularly important to establish GINS2 gene knockout mesenchymal stem cell lines.
发明内容Contents of the invention
本发明的目的是提供一种敲除GINS2基因的间充质干细胞,有效克服了现有技术使用siRNA进行干扰不能稳定遗传的技术缺陷。The purpose of the present invention is to provide a GINS2 gene knockout mesenchymal stem cell, which effectively overcomes the technical defect of using siRNA to interfere with stable inheritance in the prior art.
为实现上述目的,本发明提供一种CRISPR-cas系统的靶标,根据GINS2的基因序列,设计的具体可选择的靶位点如下(划线部分表示PAM基序):In order to achieve the above object, the present invention provides a target of the CRISPR-cas system. According to the gene sequence of GINS2, the specific selectable target sites designed are as follows (the underlined part indicates the PAM motif):
GINS2-sgRNA1:5’to 3’gcgtctcctccgggacgctgagg GINS2-sgRNA1: 5'to 3'gcgtctcctccgggacgctg agg
GINS2-sgRNA2:5’to 3’ccgaggagaccgtgaggctctgg GINS2-sgRNA2: 5'to 3'ccgaggagaccgtgaggctctgg
GINS2-sgRNA3:5’to 3’attcctcgccgagaaggagctgg GINS2-sgRNA3: 5'to 3'attcctcgccgagaaggagc tgg
GINS2-sgRNA4:5’to 3’gtcgcctgctccctccagagtgg GINS2-sgRNA4: 5'to 3'gtcgcctgctccctccagagtgg
GINS2-sgRNA5:5’to 3’cctgctccctccagagtggatgg GINS2-sgRNA5: 5'to 3'cctgctccctccagagtgga tgg
GINS2-sgRNA6:5’to 3’gtggatggatgtagaaaagttgg GINS2-sgRNA6: 5'to 3'gtggatggatgtagaaaagttgg
GINS2-sgRNA7:5’to 3’aatgcccagcccttactacatgg GINS2-sgRNA7: 5'to 3'aatgcccagcccttactaca tgg
GINS2-sgRNA8:5’to 3’tcccgaaggcagacgaaatccgg GINS2-sgRNA8: 5'to 3'tcccgaaggcagacgaaatc cgg
GINS2-sgRNA9:5’to 3’ggcagacgaaatccggaccctgg GINS2-sgRNA9: 5'to 3'ggcagacgaaatccggaccctgg
GINS2-sgRNA10:5’to 3’tgacagctttgtgagacagcagg GINS2-sgRNA10: 5'to 3'tgacagctttgtgagacagc agg
GINS2-sgRNA11:5’to 3’cagctttgtgagacagcaggagg GINS2-sgRNA11: 5'to 3' cagctttgtgagacagcagg agg
GINS2-sgRNA12:5’to 3’gctggataacttgaccttgatgg GINS2-sgRNA12: 5'to 3'gctggataacttgaccttga tgg
GINS2-sgRNA13:5’to 3’ttgatggagatcaacaccagcgg GINS2-sgRNA13: 5'to 3'ttgatggagatcaacaccag -cgg
GINS2-sgRNA14:5’to 3’ccgcacgaacctccagcctctgg GINS2-sgRNA14:5'to 3'ccgcacgaacctccagcctctgg
GINS2-sgRNA15:5’to 3’tctggagagtactcagtctcagg GINS2-sgRNA15: 5'to 3'tctggagagtactcagtctc agg
GINS2-sgRNA16:5’to 3’gtctcaggacttctagagaaagg GINS2-sgRNA16: 5'to 3'gtctcaggacttctagagaa agg
GINS2-sgRNA17:5’to 3’gatgcatgaaaaatgtgtgatgg GINS2-sgRNA17: 5'to 3'gatgcatgaaaaatgtgtga tgg
GINS2-sgRNA18:5’to 3’gaaaaatgtgtgatggtgcaagg GINS2-sgRNA18: 5'to 3'gaaaaatgtgtgatggtgca agg
GINS2-sgRNA19:5’to 3’atggtgcaaggaatggattcagg GINS2-sgRNA19: 5'to 3'atggtgcaaggaatggattc agg
GINS2-sgRNA20:5’to 3’gtccttaaaacttagctccctgg GINS2-sgRNA20: 5'to 3'gtccttaaaacttagctccctgg
GINS2-sgRNA21:5’to 3’tccttaaaacttagctccctggg GINS2-sgRNA21: 5'to 3'tccttaaaacttagctccctggg
GINS2-sgRNA22:5’to 3’tctccctagcagagccacttggg GINS2-sgRNA22: 5'to 3'tctccctagcagagccacttggg
GINS2-sgRNA23:5’to 3’tgcatggaagccatcacacttgg GINS2-sgRNA23:5'to 3'tgcatggaagccatcacacttgg
GINS2-sgRNA24:5’to 3’gcaggtgttcagtgactggtagg GINS2-sgRNA24:5'to 3'gcaggtgttcagtgactggt agg
GINS2-sgRNA25:5’to 3’ctggtaggtgtagatacagcagg。GINS2-sgRNA25:5'to 3'ctggtaggtgtagatacagc agg .
根据这些靶位点,设计具体的sgRNA如下:According to these target sites, design specific sgRNA as follows:
GINS2-sgRNA1:5’to 3’gcgtctcctccgggacgctgGINS2-sgRNA1:5'to 3'gcgtctcctccgggacgctg
GINS2-sgRNA2:5’to 3’ccgaggagaccgtgaggctcGINS2-sgRNA2:5'to 3'ccgaggagaccgtgaggctc
GINS2-sgRNA3:5’to 3’attcctcgccgagaaggagcGINS2-sgRNA3:5'to 3'attcctcgccgagaaggagc
GINS2-sgRNA4:5’to 3’gtcgcctgctccctccagagGINS2-sgRNA4:5'to 3'gtcgcctgctccctccagag
GINS2-sgRNA5:5’to 3’cctgctccctccagagtggaGINS2-sgRNA5:5'to 3'cctgctccctccagagtgga
GINS2-sgRNA6:5’to 3’gtggatggatgtagaaaagtGINS2-sgRNA6:5'to 3'gtggatggatgtagaaaagt
GINS2-sgRNA7:5’to 3’aatgcccagcccttactacaGINS2-sgRNA7:5'to 3'aatgcccagcccttactaca
GINS2-sgRNA8:5’to 3’tcccgaaggcagacgaaatcGINS2-sgRNA8:5'to 3'tcccgaaggcagacgaaatc
GINS2-sgRNA9:5’to 3’ggcagacgaaatccggacccGINS2-sgRNA9:5'to 3'ggcagacgaaatccggaccc
GINS2-sgRNA10:5’to 3’tgacagctttgtgagacagcGINS2-sgRNA10:5'to 3'tgacagctttgtgagacagc
GINS2-sgRNA11:5’to 3’cagctttgtgagacagcaggGINS2-sgRNA11:5'to 3'cagctttgtgagacagcagg
GINS2-sgRNA12:5’to 3’gctggataacttgaccttgaGINS2-sgRNA12:5'to 3'gctggataacttgaccttga
GINS2-sgRNA13:5’to 3’ttgatggagatcaacaccagGINS2-sgRNA13:5'to 3'ttgatggagatcaacaccag
GINS2-sgRNA14:5’to 3’ccgcacgaacctccagcctcGINS2-sgRNA14:5'to 3'ccgcacgaacctccagcctc
GINS2-sgRNA15:5’to 3’tctggagagtactcagtctcGINS2-sgRNA15:5'to 3'tctggagagtactcagtctc
GINS2-sgRNA16:5’to 3’gtctcaggacttctagagaaGINS2-sgRNA16:5'to 3'gtctcaggacttctagagaa
GINS2-sgRNA17:5’to 3’gatgcatgaaaaatgtgtgaGINS2-sgRNA17:5'to 3'gatgcatgaaaaatgtgtga
GINS2-sgRNA18:5’to 3’gaaaaatgtgtgatggtgcaGINS2-sgRNA18:5'to 3'gaaaaatgtgtgatggtgca
GINS2-sgRNA19:5’to 3’atggtgcaaggaatggattcGINS2-sgRNA19:5'to 3'atggtgcaaggaatggattc
GINS2-sgRNA20:5’to 3’gtccttaaaacttagctcccGINS2-sgRNA20:5'to 3'gtccttaaaacttagctccc
GINS2-sgRNA21:5’to 3’tccttaaaacttagctccctGINS2-sgRNA21:5'to 3'tccttaaaacttagctccct
GINS2-sgRNA22:5’to 3’tctccctagcagagccacttGINS2-sgRNA22:5'to 3'tctccctagcagagccactt
GINS2-sgRNA23:5’to 3’tgcatggaagccatcacactGINS2-sgRNA23:5'to 3'tgcatggaagccatcacact
GINS2-sgRNA24:5’to 3’gcaggtgttcagtgactggtGINS2-sgRNA24:5'to 3'gcaggtgttcagtgactggt
GINS2-sgRNA25:5’to 3’ctggtaggtgtagatacagcGINS2-sgRNA25:5'to 3'ctggtaggtgtagatacagc
为了提高基因编辑效率,包括向间充质干细胞中引入增效蛋白,所述增效蛋白CREnhancer1.0是由SEQ ID NO:1所示的核苷酸序列编码的蛋白质。In order to improve gene editing efficiency, it includes introducing a potentiating protein into the mesenchymal stem cells, and the synergizing protein CREnhancer1.0 is a protein encoded by the nucleotide sequence shown in SEQ ID NO:1.
进一步地,所述增效蛋白包含a)或b):Further, the synergistic protein comprises a) or b):
a)SEQ ID NO:1所示的核苷酸序列编码的蛋白质的多核苷酸序列;a) the polynucleotide sequence of the protein encoded by the nucleotide sequence shown in SEQ ID NO:1;
b)SEQ ID NO:2所示的氨基酸序列。b) The amino acid sequence shown in SEQ ID NO:2.
进一步地,克隆增效蛋白CREnhancer1.0基因,构建EGFP标记的增效蛋白CREnhancer1.0慢病毒表达载体,用GP2-293T细胞包装慢病毒,修饰干细胞。Further, clone the synergistic protein CREnhancer1.0 gene, construct the EGFP-labeled synergistic protein CREnhancer1.0 lentiviral expression vector, use GP2-293T cells to package the lentivirus, and modify the stem cells.
更进一步地,提供一种在间充质干细胞中采用CRISPR/Cas9进行基因编辑的系统,其特征在于所述系统包括:(1)用于表达SEQ ID NO:1所述的CREnhancer1.0基因的质粒;(2)sgRNA已经插入的表达PX330的质粒(其可以表达sgRNA和cas9)。Furthermore, a system for gene editing using CRISPR/Cas9 in mesenchymal stem cells is provided, characterized in that the system includes: (1) for expressing the CREnhancer1.0 gene described in SEQ ID NO: 1 Plasmid; (2) PX330-expressing plasmid (which can express sgRNA and cas9) into which sgRNA has been inserted.
更进一步地,所述sgRNA和cas9表达载体也可以是本领域常用的其他表达载体。Furthermore, the sgRNA and cas9 expression vectors may also be other expression vectors commonly used in the art.
为实现上述目的,本发明还提供一种构建GINS2基因敲除的间充质干细胞细胞系方法,包括将所述基因编辑系统导入间充质干细胞中,获得编辑阳性细胞,随后繁殖、收获所述干细胞。To achieve the above purpose, the present invention also provides a method for constructing a GINS2 gene knockout mesenchymal stem cell line, comprising introducing the gene editing system into the mesenchymal stem cells to obtain edited positive cells, and then propagating and harvesting the stem cell.
具体的间充质干细胞为人骨髓间充质干细胞(hMSCs)PC015,购买自上海艾研生物科技有限公司。The specific mesenchymal stem cells are human bone marrow mesenchymal stem cells (hMSCs) PC015, purchased from Shanghai Ayan Biotechnology Co., Ltd.
本发明提供了一种构建GINS2基因敲除的间充质干细胞细胞系方法,具有以下优点:本发明在间充质干细胞中,构建了GINS2基因敲除的细胞系,筛选并优化获得了最佳的sgRNA,敲除效率高,传代稳定。The invention provides a method for constructing a GINS2 gene knockout mesenchymal stem cell line, which has the following advantages: the present invention constructs a GINS2 gene knockout cell line in the mesenchymal stem cells, screens and optimizes to obtain the best sgRNA with high knockout efficiency and stable passage.
下面通过附图和实施例,对本发明的技术方案做进一步的详细描述。The technical solutions of the present invention will be described in further detail below with reference to the accompanying drawings and embodiments.
附图说明Description of drawings
图1 PX330质粒图;Figure 1 PX330 plasmid map;
图2 PX330中sgRNA插入位点图;Figure 2 sgRNA insertion site map in PX330;
图3 25个sgRNA基因标记效率示意图;Figure 3 Schematic diagram of 25 sgRNA gene labeling efficiencies;
具体实施方式Detailed ways
下面通过具体实施例进一步说明本发明提高基因组编辑效率的方法的技术方案。The technical scheme of the method for improving genome editing efficiency of the present invention will be further illustrated below through specific examples.
实施例1、CRISPR表达载体的构建Embodiment 1, construction of CRISPR expression vector
gRNA的设计gRNA design
根据靶基因的基因序列,通过申请人独特的优化设计方法,具体筛选得到具体的sgRNA的形式如下:According to the gene sequence of the target gene, through the applicant's unique optimization design method, the specific form of sgRNA obtained through specific screening is as follows:
GINS2-sgRNA1:5’to 3’gcgtctcctccgggacgctgGINS2-sgRNA1:5'to 3'gcgtctcctccgggacgctg
GINS2-sgRNA2:5’to 3’ccgaggagaccgtgaggctcGINS2-sgRNA2:5'to 3'ccgaggagaccgtgaggctc
GINS2-sgRNA3:5’to 3’attcctcgccgagaaggagcGINS2-sgRNA3:5'to 3'attcctcgccgagaaggagc
GINS2-sgRNA4:5’to 3’gtcgcctgctccctccagagGINS2-sgRNA4:5'to 3'gtcgcctgctccctccagag
GINS2-sgRNA5:5’to 3’cctgctccctccagagtggaGINS2-sgRNA5:5'to 3'cctgctccctccagagtgga
GINS2-sgRNA6:5’to 3’gtggatggatgtagaaaagtGINS2-sgRNA6:5'to 3'gtggatggatgtagaaaagt
GINS2-sgRNA7:5’to 3’aatgcccagcccttactacaGINS2-sgRNA7:5'to 3'aatgcccagcccttactaca
GINS2-sgRNA8:5’to 3’tcccgaaggcagacgaaatcGINS2-sgRNA8:5'to 3'tcccgaaggcagacgaaatc
GINS2-sgRNA9:5’to 3’ggcagacgaaatccggacccGINS2-sgRNA9:5'to 3'ggcagacgaaatccggaccc
GINS2-sgRNA10:5’to 3’tgacagctttgtgagacagcGINS2-sgRNA10:5'to 3'tgacagctttgtgagacagc
GINS2-sgRNA11:5’to 3’cagctttgtgagacagcaggGINS2-sgRNA11:5'to 3'cagctttgtgagacagcagg
GINS2-sgRNA12:5’to 3’gctggataacttgaccttgaGINS2-sgRNA12:5'to 3'gctggataacttgaccttga
GINS2-sgRNA13:5’to 3’ttgatggagatcaacaccagGINS2-sgRNA13:5'to 3'ttgatggagatcaacaccag
GINS2-sgRNA14:5’to 3’ccgcacgaacctccagcctcGINS2-sgRNA14:5'to 3'ccgcacgaacctccagcctc
GINS2-sgRNA15:5’to 3’tctggagagtactcagtctcGINS2-sgRNA15:5'to 3'tctggagagtactcagtctc
GINS2-sgRNA16:5’to 3’gtctcaggacttctagagaaGINS2-sgRNA16:5'to 3'gtctcaggacttctagagaa
GINS2-sgRNA17:5’to 3’gatgcatgaaaaatgtgtgaGINS2-sgRNA17:5'to 3'gatgcatgaaaaatgtgtga
GINS2-sgRNA18:5’to 3’gaaaaatgtgtgatggtgcaGINS2-sgRNA18:5'to 3'gaaaaatgtgtgatggtgca
GINS2-sgRNA19:5’to 3’atggtgcaaggaatggattcGINS2-sgRNA19:5'to 3'atggtgcaaggaatggattc
GINS2-sgRNA20:5’to 3’gtccttaaaacttagctcccGINS2-sgRNA20:5'to 3'gtccttaaaacttagctccc
GINS2-sgRNA21:5’to 3’tccttaaaacttagctccctGINS2-sgRNA21:5'to 3'tccttaaaacttagctccct
GINS2-sgRNA22:5’to 3’tctccctagcagagccacttGINS2-sgRNA22:5'to 3'tctccctagcagagccactt
GINS2-sgRNA23:5’to 3’tgcatggaagccatcacactGINS2-sgRNA23:5'to 3'tgcatggaagccatcacact
GINS2-sgRNA24:5’to 3’gcaggtgttcagtgactggtGINS2-sgRNA24:5'to 3'gcaggtgttcagtgactggt
GINS2-sgRNA25:5’to 3’ctggtaggtgtagatacagcGINS2-sgRNA25:5'to 3'ctggtaggtgtagatacagc
根据上述的gRNA,在其5'端加上CACC得到正向寡核苷酸序列,在其互补链的5'端加上AAAC得到反向寡核苷酸序列,分别合成正向和反向寡核苷酸序列,然后将合成的序列变性、退火,得到具有BbsI粘性末端的双链DNA片段,如下:正向:5’-CACCNNNNNNNNNNNNNNNNNNNN反向:NNNNNNNNNNNNNNNNNNNNCAAA-5’,变性、退火体系为:2μl正向寡核苷酸链(50μM)2μl反向寡核苷酸链(50μM)46μll*NEBbuffer在PCR仪中按以下程序运行:90℃,4min;70℃,10min;37℃,20min;25℃,20min。According to the above gRNA, add CACC to its 5' end to obtain the forward oligonucleotide sequence, add AAAC to the 5' end of its complementary strand to obtain the reverse oligonucleotide sequence, and synthesize forward and reverse oligonucleotides respectively Nucleotide sequence, and then denature and anneal the synthesized sequence to obtain a double-stranded DNA fragment with BbsI sticky ends, as follows: Forward: 5'-CACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAA-5', denaturation, annealing system: 2μl forward To the oligonucleotide chain (50 μM) 2 μl reverse oligonucleotide chain (50 μM) 46 μll*NEBbuffer in the PCR machine according to the following procedures: 90 ° C, 4 min; 70 ° C, 10 min; 37 ° C, 20 min; 25 ° C, 20min.
退火后的双链寡核苷酸链含有BbsI的粘性末端,直接与被BbsI酶切过的pX330-U6-Chimeric_BB-CBh-hSpCas9(以下简称PX330)(SEQ ID NO.3)载体进行连接,可以得PX330-gRNA-Cas9重组质粒。The annealed double-stranded oligonucleotide chain contains the cohesive end of BbsI, and is directly connected to the pX330-U6-Chimeric_BB-CBh-hSpCas9 (hereinafter referred to as PX330) (SEQ ID NO.3) vector cut by BbsI, which can be The PX330-gRNA-Cas9 recombinant plasmid was obtained.
酶切体系:水39.3μl,10*FD buffer 5μl,BbsI 2μl,PX330 3.7μl(2μg)37℃水浴2h酶切后的质粒直接用胶回收试剂盒回收。Enzyme digestion system: 39.3 μl of water, 5 μl of 10*FD buffer, 2 μl of BbsI, 3.7 μl (2 μg) of PX330 in a water bath at 37°C for 2 hours. The digested plasmid was directly recovered with a gel recovery kit.
连接体系:退火产物0.5μl,线性化的PX330质粒2μ1,5*ligation buffer 2μl,T4DNA Ligase(3units/μ1),1μl,水4.5μl,16℃水浴2h将上述步骤得到的连接产物转化JM109感受态细胞,涂布于Amp+的LB平板,挑取阳性克隆接菌,37℃摇床摇菌过夜,质粒抽提试剂盒提取质粒并进行测序鉴定,得到PX330-gRNA质粒。Ligation system: 0.5 μl of annealed product, 2 μl of linearized PX330 plasmid, 2 μl of 5*ligation buffer, 1 μl of T4 DNA Ligase (3units/μ1), 4.5 μl of water, 2 hours in a water bath at 16°C, and transform the ligation product obtained in the above steps into JM109 competent The cells were spread on the Amp+ LB plate, the positive clones were picked and inoculated, and the bacteria were shaken overnight at 37°C, and the plasmid was extracted by the plasmid extraction kit and sequenced to obtain the PX330-gRNA plasmid.
实施例2 克隆增效蛋白CREnhancer1.0及构建载体Example 2 Cloning of enhancer protein CREnhancer1.0 and constructing vector
克隆增效蛋白CREnhancer1.0基因,通过全基因合成的方法,获得SEQ ID NO:1所述的基因序列,以该序列为模板,根据上下游引物序列分别为5'-ATGCAGGAGAACCTGGCCCCCTG-3',5'-CAGGCAGCTCACGCTCCTCTCG-3',引物和全基因组由上海生工有限公司合成。PCR反应扩增CREnhancer1.0基因目的基因片段,扩增反应体系如下:95℃、40s,57℃、1min,72℃、1min,72℃、10min,循环35次,PCR产物由上海生工有限公司进行测序,通过测序,结合与SEQ ID NO:1完全匹配。随后,将PCR扩增的目的基因连接在空载体慢病毒载体pHIV-CS-CDF-CG-PRE上,通过PCR扩增、酶切、测序等方法鉴定重组慢病毒载体。结合证明重组慢病毒载体构建成功。随后将该重组慢病毒载体质粒同辅助质粒一起共感染人骨髓间充质干细胞(hMSCs)PC015,通过重组而包装成能表达CREnhancer1.0基因的人骨髓间质干细胞。通过PCR筛选鉴定,将稳定转染的干细胞用于后续基因编辑应用。The CREnhancer1.0 gene was cloned, and the gene sequence described in SEQ ID NO: 1 was obtained by the method of whole gene synthesis. Using this sequence as a template, according to the sequences of the upstream and downstream primers, they were 5'-ATGCAGGAGAACCTGGCCCCCTG-3', 5 '-CAGGCAGCTCACGCTCCTCTCG-3', primers and whole genome were synthesized by Shanghai Sangong Co., Ltd. The target gene fragment of CREnhancer1.0 gene was amplified by PCR reaction. The amplification reaction system was as follows: 95°C, 40s, 57°C, 1min, 72°C, 1min, 72°C, 10min, cycled 35 times, and the PCR product was produced by Shanghai Shenggong Co., Ltd. Sequencing was performed, and the binding was a complete match to SEQ ID NO:1 by sequencing. Subsequently, the target gene amplified by PCR was connected to the empty vector lentiviral vector pHIV-CS-CDF-CG-PRE, and the recombinant lentiviral vector was identified by methods such as PCR amplification, enzyme digestion, and sequencing. The combination proved that the recombinant lentiviral vector was constructed successfully. Subsequently, the recombinant lentiviral vector plasmid and the helper plasmid were co-infected into human bone marrow mesenchymal stem cells (hMSCs) PC015, and packaged into human bone marrow mesenchymal stem cells capable of expressing CREnhancer1.0 gene through recombination. Identified by PCR screening, the stably transfected stem cells were used for subsequent gene editing applications.
实施例3 CRISPR/Cas9在骨髓间质干细胞中的应用Example 3 Application of CRISPR/Cas9 in bone marrow mesenchymal stem cells
基于含BSD-fsEGFP融合基因pBGN质粒的CRISPR/Cas9编辑载体CRISPR/Cas9 editing vector based on pBGN plasmid containing BSD-fsEGFP fusion gene
(1)BSD-fsEGFP融合基因:利用常规PCR,扩增公知的BSD基因,5’-PCR引物带HindIII位点,3’-PCR引物引入I-SceI和EcoRI位点。将PCR产物(BSD)插入EGFP质粒(EGFP核苷酸序列为本领域公知的序列,例如CN105647968A中的序列1和序列2所示)中CMV驱动子和EGFP编码区的之间的HindIII和EcoRI位点,生成含BSD-fsEGFP融合基因的质粒pBGN,BSD-fsEGFP融合基因核苷酸序列为如CN105647968A中的序列3和序列4所示)。该融合基因由CMV驱动子或PGK驱动子驱动,但EGFP由于移码而无活性,因此称fsEGFP。(1) BSD-fsEGFP fusion gene: use conventional PCR to amplify the known BSD gene, 5'-PCR primers with HindIII sites, and 3'-PCR primers to introduce I-SceI and EcoRI sites. Insert the PCR product (BSD) into the HindIII and EcoRI positions between the CMV driver and the EGFP coding region in the EGFP plasmid (the EGFP nucleotide sequence is a sequence known in the art, such as shown in sequence 1 and sequence 2 in CN105647968A) Point, generate the plasmid pBGN containing the BSD-fsEGFP fusion gene, the nucleotide sequence of the BSD-fsEGFP fusion gene is as shown in sequence 3 and sequence 4 in CN105647968A). The fusion gene is driven by CMV driver or PGK driver, but EGFP is inactive due to frameshift, so it is called fsEGFP.
5’-PCR引物为5'-PCR primers are
CTCAAGCTTAACTAAACCATGGCCAAGCCTTTGTCTCAAGAAG,CTCAAGCTTAACTAAACCATGGCCAAGCCCTTTGTCTCAAGAAG,
3’-PCR引物为3'-PCR primers are
AGAATTCCAGTAGGGATAACAGGGTAATGCCAGGTCCGCCCTCCCACACATAACCAGAG。AGAATTCCAGTAGGGATAACAGGGTAATGCCAGGTCCGCCCTCCCACACATAACCAGAG.
(2)将测试质粒pBGN,实施例1制备的表达质粒共转染骨髓间质干细胞。以未转染实施例2的增效基因的干细胞作为阳性对照,同时,将常规用的GFP表达质粒平行转染细胞以测定转染效率,利用转染效率校正获取的CRISPR/Cas9基因编辑相对效率。(2) The test plasmid pBGN and the expression plasmid prepared in Example 1 were co-transfected into bone marrow mesenchymal stem cells. Stem cells that were not transfected with the synergistic gene of Example 2 were used as a positive control. At the same time, cells were transfected in parallel with conventional GFP expression plasmids to determine the transfection efficiency, and the relative efficiency of CRISPR/Cas9 gene editing obtained was corrected using the transfection efficiency .
(4)转染2-3天后,利用流式细胞仪测量GFP+细胞的频率。(4) 2-3 days after transfection, the frequency of GFP + cells was measured by flow cytometry.
(5)计算特定sgRNA介导的CRISPR/Cas9基因编辑相对效率。这个相对效率由GFP阳性细胞频率与转染效率的比值代表,结果如图3所示。我们发现未转染实施例2的增效蛋白的干细胞中GFP阳性细胞频率明显低于转染了实施例2的增效蛋白的细胞。其中在25个sgRNA中,只有GINS2-sgRNA7和GINS2-sgRNA23具有较好的基因编辑效果。采用空载体制备的阴性对照没有GFP阳性细胞,其中P值均小于0.01,具有统计学意义。(5) Calculate the relative efficiency of specific sgRNA-mediated CRISPR/Cas9 gene editing. This relative efficiency is represented by the ratio of the frequency of GFP-positive cells to the transfection efficiency, and the results are shown in FIG. 3 . We found that the frequency of GFP-positive cells in stem cells not transfected with the potentiating protein of Example 2 was significantly lower than that of cells transfected with the potentiating protein of Example 2. Among the 25 sgRNAs, only GINS2-sgRNA7 and GINS2-sgRNA23 had good gene editing effects. The negative control prepared with empty vector had no GFP-positive cells, and the P values were all less than 0.01, which was statistically significant.
将骨髓间质干细胞GINS2-sgRNA23(即采用GINS2-sgRNA23进行CRISPR编辑后获得的干细胞)和将骨髓间质干细胞GINS2-sgRNA7进行稳定传代培养,培养40代之后,通过针对GINS2PCR测序,发现该基因仍然是突变失活的,保持了基因被敲除的效果。这充分说明,本发明的敲出系统具有较好的稳定性。Bone marrow mesenchymal stem cells GINS2-sgRNA23 (that is, stem cells obtained after CRISPR editing with GINS2-sgRNA23) and bone marrow mesenchymal stem cells GINS2-sgRNA7 were stably subcultured. After 40 generations of culture, the gene was found to be still It is inactivated by mutation and maintains the effect of gene knockout. This fully demonstrates that the knockout system of the present invention has better stability.
最后所应说明的是,以上实施例仅用以说明本发明的技术方案而非限制,尽管参照较佳实施例对本发明进行了详细说明,本领域的普通技术人员应当理解,可以对本发明的技术方案进行修改或者等同替换,而不脱离本发明技术方案的精神和范围。Finally, it should be noted that the above embodiments are only used to illustrate the technical solutions of the present invention without limitation. Although the present invention has been described in detail with reference to the preferred embodiments, those of ordinary skill in the art should understand that the technical solutions of the present invention can be The scheme shall be modified or equivalently replaced without departing from the spirit and scope of the technical scheme of the present invention.
序列表sequence listing
<110> 洛阳轩智生物科技有限公司<110> Luoyang Xuanzhi Biotechnology Co., Ltd.
<120> 使用CRISPR-CAS系统对间充质干细胞进行GINS2基因敲除的方法<120> A method for knocking out GINS2 gene in mesenchymal stem cells using CRISPR-CAS system
<160> 7<160> 7
<170> SIPOSequenceListing 1.0<170> SIPOSequenceListing 1.0
<210> 1<210> 1
<211> 1578<211> 1578
<212> DNA<212>DNA
<213> 人工序列(2 Ambystoma laterale x Ambystoma jeffersonianum)<213> Artificial sequence (2 Ambystoma laterale x Ambystoma jeffersonianum)
<400> 1<400> 1
atgcaggaga acctggcccc ctggggcgag ctggccaccg acaacatcat cctgaccgtg 60atgcaggaga acctggcccc ctggggcgag ctggccaccg acaacatcat cctgaccgtg 60
cccaccacca acctgcaggc cctgaaggac cccgagcccg tgctgaggct gtgggacgag 120cccaccacca acctgcaggc cctgaaggac cccgagcccg tgctgaggct gtgggacgag 120
atgatgcagg ccgtggccag gctggccgcc gagcccttcc ccttcaggag gcccgagagg 180atgatgcagg ccgtggccag gctggccgcc gagcccttcc ccttcaggag gcccgagagg 180
atcgtggccg acgtgcagat cagcgccggc tggatgcaca gcggctaccc catcatgtgc 240atcgtggccg acgtgcagat cagcgccggc tggatgcaca gcggctaccc catcatgtgc 240
cacctggaga gcgtgaagga gatcatcaac gagatggaca tgaggagcag gggcgtgtgg 300cacctggaga gcgtgaagga gatcatcaac gagatggaca tgaggagcag gggcgtgtgg 300
ggccccatcc acgagctggg ccacaaccag cagaggcacg gctgggagtt ccccccccac 360ggccccatcc acgagctggg ccacaaccag cagaggcacg gctggggagtt ccccccccac 360
accaccgagg ccacctgcaa cctgtggagc gtgtacgtgc acgagaccgt gctgggcatc 420accaccgagg ccacctgcaa cctgtggagc gtgtacgtgc acgagaccgt gctgggcatc 420
cccagggccc aggcccacga ggccctgagc ccccccgaga gggagaggag gatcaaggcc 480cccagggccc aggcccacga ggccctgagc ccccccgaga gggagaggag gatcaaggcc 480
cacctgggca agggcgcccc cctgtgcgac tggaacgtgt ggaccgccct ggagacctac 540cacctgggca agggcgcccc cctgtgcgac tggaacgtgt ggaccgccct ggagacctac 540
ctgcaggtgc tgagcaggaa cagcggcagg aggggcgtgg acggcaggct ggtgcacacc 600ctgcaggtgc tgagcaggaa cagcggcagg aggggcgtgg acggcaggct ggtgcacacc 600
tgcatcaagg ccggcgccgt gaggtggctg gccaggggcc agaccggcaa ggtgggcgtg 660tgcatcaagg ccggcgccgt gaggtggctg gccaggggcc agaccggcaa ggtgggcgtg 660
aacaccaacc tgaaggacct gtgccccctg ctgagcgagc acggcctgca gtgcagcctg 720aacaccaacc tgaaggacct gtgccccctg ctgagcgagc acggcctgca gtgcagcctg 720
gagccccacc tgaacagcga cctgtgcgtg tactgctgca aggcctacag cgacaaggag 780gagccccacc tgaacagcga cctgtgcgtg tactgctgca aggcctacag cgacaaggag 780
gccaagcagc tgcaggagtt cgtggccgag ggcggcggcc tgctgatcgg cggccaggcc 840gccaagcagc tgcaggagtt cgtggccgag ggcggcggcc tgctgatcgg cggccaggcc 840
tggtggtggg ccagccagaa ccccggccac tgccccctgg ccggcttccc cggcaacatc 900tggtggtggg ccagccagaa ccccggccac tgccccctgg ccggcttccc cggcaacatc 900
atcctgaact gcttcggcct gagcatcctg ccccagaccc tgaaggccgg ctgcttcccc 960atcctgaact gcttcggcct gagcatcctg ccccagaccc tgaaggccgg ctgcttcccc 960
gtgcccaccc ccgagatgag gagctaccac ttcaggaagg ccctgagcca gttccaggcc1020gtgcccaccc ccgagatgag gagctaccac ttcaggaagg ccctgagcca gttccaggcc1020
atcctgaacc acgagaacgg caacctggag aagagctgcc tggccaagct gagggtggac1080atcctgaacc acgagaacgg caacctggag aagagctgcc tggccaagct gagggtggac1080
ggcgccgcct tcctgcagat ccccgccgag ggcgtgcccg cctacatcag cctgcacagg1140ggcgccgcct tcctgcagat ccccgccgag ggcgtgcccg cctacatcag cctgcacagg1140
ctgctgagga agatgctgag gggcagcggc ctgcccgccg tgagcaggga gaaccccgtg1200ctgctgagga agatgctgag gggcagcggc ctgcccgccg tgagcaggga gaaccccgtg1200
gccagcgaca gctacgaggc cgccgtgctg agcctggcca ccggcctggc ccacagcggc1260gccagcgaca gctacgaggc cgccgtgctg agcctggcca ccggcctggc ccacagcggc1260
accgactgca gccagctggc ccagggcctg ggcacctgga cctgcagcag cagcctgtac1320accgactgca gccagctggc ccagggcctg ggcacctgga cctgcagcag cagcctgtac1320
cccagcaagc accccatcac cgtggagatc aacggcatca accccggcaa caacgactgc1380cccagcaagc accccatcac cgtggagatc aacggcatca accccggcaa caacgactgc1380
tgggtgagca ccggcctgta cctgctggag ggccagaacg ccgaggtgag cctgagcgag1440tgggtgagca ccggcctgta cctgctggag ggccagaacg ccgaggtgag cctgagcgag1440
gccgccgcca gcgccggcct gagggtgcag atcggctgcc acaccgacga cctgaccaag1500gccgccgcca gcgccggcct gagggtgcag atcggctgcc acaccgacga cctgaccaag1500
gccaggaagc tgagcagggc ccccatggtg acccaccagt gctggatgga caggaccgag1560gccaggaagc tgagcagggc ccccatggtg accccaccagt gctggatgga caggaccgag1560
aggagcgtga gctgcctg 1578aggagcgtga gctgcctg 1578
<210> 2<210> 2
<211> 526<211> 526
<212> PRT<212> PRT
<213> 人工序列(2 Ambystoma laterale x Ambystoma jeffersonianum)<213> Artificial sequence (2 Ambystoma laterale x Ambystoma jeffersonianum)
<400> 2<400> 2
Met Gln Glu Asn Leu Ala Pro Trp Gly Glu Leu Ala Thr Asp Asn IleMet Gln Glu Asn Leu Ala Pro Trp Gly Glu Leu Ala Thr Asp Asn Ile
1 5 10 151 5 10 15
Ile Leu Thr Val Pro Thr Thr Asn Leu Gln Ala Leu Lys Asp Pro GluIle Leu Thr Val Pro Thr Thr Asn Leu Gln Ala Leu Lys Asp Pro Glu
20 25 30 20 25 30
Pro Val Leu Arg Leu Trp Asp Glu Met Met Gln Ala Val Ala Arg LeuPro Val Leu Arg Leu Trp Asp Glu Met Met Gln Ala Val Ala Arg Leu
35 40 45 35 40 45
Ala Ala Glu Pro Phe Pro Phe Arg Arg Pro Glu Arg Ile Val Ala AspAla Ala Glu Pro Phe Pro Phe Arg Arg Pro Glu Arg Ile Val Ala Asp
50 55 60 50 55 60
Val Gln Ile Ser Ala Gly Trp Met His Ser Gly Tyr Pro Ile Met CysVal Gln Ile Ser Ala Gly Trp Met His Ser Gly Tyr Pro Ile Met Cys
65 70 75 8065 70 75 80
His Leu Glu Ser Val Lys Glu Ile Ile Asn Glu Met Asp Met Arg SerHis Leu Glu Ser Val Lys Glu Ile Ile Asn Glu Met Asp Met Arg Ser
85 90 95 85 90 95
Arg Gly Val Trp Gly Pro Ile His Glu Leu Gly His Asn Gln Gln ArgArg Gly Val Trp Gly Pro Ile His Glu Leu Gly His Asn Gln Gln Arg
100 105 110 100 105 110
His Gly Trp Glu Phe Pro Pro His Thr Thr Glu Ala Thr Cys Asn LeuHis Gly Trp Glu Phe Pro Pro His Thr Thr Glu Ala Thr Cys Asn Leu
115 120 125 115 120 125
Trp Ser Val Tyr Val His Glu Thr Val Leu Gly Ile Pro Arg Ala GlnTrp Ser Val Tyr Val His Glu Thr Val Leu Gly Ile Pro Arg Ala Gln
130 135 140 130 135 140
Ala His Glu Ala Leu Ser Pro Pro Glu Arg Glu Arg Arg Ile Lys AlaAla His Glu Ala Leu Ser Pro Pro Glu Arg Glu Arg Arg Ile Lys Ala
145 150 155 160145 150 155 160
His Leu Gly Lys Gly Ala Pro Leu Cys Asp Trp Asn Val Trp Thr AlaHis Leu Gly Lys Gly Ala Pro Leu Cys Asp Trp Asn Val Trp Thr Ala
165 170 175 165 170 175
Leu Glu Thr Tyr Leu Gln Val Leu Ser Arg Asn Ser Gly Arg Arg GlyLeu Glu Thr Tyr Leu Gln Val Leu Ser Arg Asn Ser Gly Arg Arg Gly
180 185 190 180 185 190
Val Asp Gly Arg Leu Val His Thr Cys Ile Lys Ala Gly Ala Val ArgVal Asp Gly Arg Leu Val His Thr Cys Ile Lys Ala Gly Ala Val Arg
195 200 205 195 200 205
Trp Leu Ala Arg Gly Gln Thr Gly Lys Val Gly Val Asn Thr Asn LeuTrp Leu Ala Arg Gly Gln Thr Gly Lys Val Gly Val Asn Thr Asn Leu
210 215 220 210 215 220
Lys Asp Leu Cys Pro Leu Leu Ser Glu His Gly Leu Gln Cys Ser LeuLys Asp Leu Cys Pro Leu Leu Ser Glu His Gly Leu Gln Cys Ser Leu
225 230 235 240225 230 235 240
Glu Pro His Leu Asn Ser Asp Leu Cys Val Tyr Cys Cys Lys Ala TyrGlu Pro His Leu Asn Ser Asp Leu Cys Val Tyr Cys Cys Lys Ala Tyr
245 250 255 245 250 255
Ser Asp Lys Glu Ala Lys Gln Leu Gln Glu Phe Val Ala Glu Gly GlySer Asp Lys Glu Ala Lys Gln Leu Gln Glu Phe Val Ala Glu Gly Gly
260 265 270 260 265 270
Gly Leu Leu Ile Gly Gly Gln Ala Trp Trp Trp Ala Ser Gln Asn ProGly Leu Leu Ile Gly Gly Gln Ala Trp Trp Trp Ala Ser Gln Asn Pro
275 280 285 275 280 285
Gly His Cys Pro Leu Ala Gly Phe Pro Gly Asn Ile Ile Leu Asn CysGly His Cys Pro Leu Ala Gly Phe Pro Gly Asn Ile Ile Leu Asn Cys
290 295 300 290 295 300
Phe Gly Leu Ser Ile Leu Pro Gln Thr Leu Lys Ala Gly Cys Phe ProPhe Gly Leu Ser Ile Leu Pro Gln Thr Leu Lys Ala Gly Cys Phe Pro
305 310 315 320305 310 315 320
Val Pro Thr Pro Glu Met Arg Ser Tyr His Phe Arg Lys Ala Leu SerVal Pro Thr Pro Glu Met Arg Ser Tyr His Phe Arg Lys Ala Leu Ser
325 330 335 325 330 335
Gln Phe Gln Ala Ile Leu Asn His Glu Asn Gly Asn Leu Glu Lys SerGln Phe Gln Ala Ile Leu Asn His Glu Asn Gly Asn Leu Glu Lys Ser
340 345 350 340 345 350
Cys Leu Ala Lys Leu Arg Val Asp Gly Ala Ala Phe Leu Gln Ile ProCys Leu Ala Lys Leu Arg Val Asp Gly Ala Ala Phe Leu Gln Ile Pro
355 360 365 355 360 365
Ala Glu Gly Val Pro Ala Tyr Ile Ser Leu His Arg Leu Leu Arg LysAla Glu Gly Val Pro Ala Tyr Ile Ser Leu His Arg Leu Leu Arg Lys
370 375 380 370 375 380
Met Leu Arg Gly Ser Gly Leu Pro Ala Val Ser Arg Glu Asn Pro ValMet Leu Arg Gly Ser Gly Leu Pro Ala Val Ser Arg Glu Asn Pro Val
385 390 395 400385 390 395 400
Ala Ser Asp Ser Tyr Glu Ala Ala Val Leu Ser Leu Ala Thr Gly LeuAla Ser Asp Ser Tyr Glu Ala Ala Val Leu Ser Leu Ala Thr Gly Leu
405 410 415 405 410 415
Ala His Ser Gly Thr Asp Cys Ser Gln Leu Ala Gln Gly Leu Gly ThrAla His Ser Gly Thr Asp Cys Ser Gln Leu Ala Gln Gly Leu Gly Thr
420 425 430 420 425 430
Trp Thr Cys Ser Ser Ser Leu Tyr Pro Ser Lys His Pro Ile Thr ValTrp Thr Cys Ser Ser Ser Leu Tyr Pro Ser Lys His Pro Ile Thr Val
435 440 445 435 440 445
Glu Ile Asn Gly Ile Asn Pro Gly Asn Asn Asp Cys Trp Val Ser ThrGlu Ile Asn Gly Ile Asn Pro Gly Asn Asn Asp Cys Trp Val Ser Thr
450 455 460 450 455 460
Gly Leu Tyr Leu Leu Glu Gly Gln Asn Ala Glu Val Ser Leu Ser GluGly Leu Tyr Leu Leu Glu Gly Gln Asn Ala Glu Val Ser Leu Ser Glu
465 470 475 480465 470 475 480
Ala Ala Ala Ser Ala Gly Leu Arg Val Gln Ile Gly Cys His Thr AspAla Ala Ala Ser Ala Gly Leu Arg Val Gln Ile Gly Cys His Thr Asp
485 490 495 485 490 495
Asp Leu Thr Lys Ala Arg Lys Leu Ser Arg Ala Pro Met Val Thr HisAsp Leu Thr Lys Ala Arg Lys Leu Ser Arg Ala Pro Met Val Thr His
500 505 510 500 505 510
Gln Cys Trp Met Asp Arg Thr Glu Arg Ser Val Ser Cys LeuGln Cys Trp Met Asp Arg Thr Glu Arg Ser Val Ser Cys Leu
515 520 525 515 520 525
<210> 3<210> 3
<211> 8506<211> 8506
<212> DNA<212>DNA
<213> 人工序列(2 Ambystoma laterale x Ambystoma jeffersonianum)<213> Artificial sequence (2 Ambystoma laterale x Ambystoma jeffersonianum)
<400> 3<400> 3
gagggcctat ttcccatgat tccttcatat ttgcatatac gatacaaggc tgttagagag 60gagggcctat ttcccatgat tccttcatat ttgcatatac gatacaaggc tgttagagag 60
ataattggaa ttaatttgac tgtaaacaca aagatattag tacaaaatac gtgacgtaga 120ataattggaa ttaatttgac tgtaaacaca aagatattag tacaaaatac gtgacgtaga 120
aagtaataat ttcttgggta gtttgcagtt ttaaaattat gttttaaaat ggactatcat 180aagtaataat ttcttgggta gtttgcagtt ttaaaattat gttttaaaat ggactatcat 180
atgcttaccg taacttgaaa gtatttcgat ttcttggctt tatatatctt gtggaaagga 240atgcttaccg taacttgaaa gtatttcgat ttcttggctt tatatatctt gtggaaagga 240
cgaaacaccg ggtcttcgag aagacctgtt ttagagctag aaatagcaag ttaaaataag 300cgaaacaccg ggtcttcgag aagacctgtt ttagagctag aaatagcaag ttaaaataag 300
gctagtccgt tatcaacttg aaaaagtggc accgagtcgg tgcttttttg ttttagagct 360gctagtccgt tatcaacttg aaaaagtggc accgagtcgg tgcttttttg ttttagagct 360
agaaatagca agttaaaata aggctagtcc gtttttagcg cgtgcgccaa ttctgcagac 420agaaatagca agttaaaata aggctagtcc gtttttagcg cgtgcgccaa ttctgcagac 420
aaatggctct agaggtaccc gttacataac ttacggtaaa tggcccgcct ggctgaccgc 480aaatggctct agaggtaccc gttacataac ttacggtaaa tggcccgcct ggctgaccgc 480
ccaacgaccc ccgcccattg acgtcaatag taacgccaat agggactttc cattgacgtc 540ccaacgaccc ccgcccattg acgtcaatag taacgccaat agggactttc cattgacgtc 540
aatgggtgga gtatttacgg taaactgccc acttggcagt acatcaagtg tatcatatgc 600aatgggtgga gtatttacgg taaactgccc acttggcagt acatcaagtg tatcatatgc 600
caagtacgcc ccctattgac gtcaatgacg gtaaatggcc cgcctggcat tgtgcccagt 660caagtacgcc ccctattgac gtcaatgacg gtaaatggcc cgcctggcat tgtgcccagt 660
acatgacctt atgggacttt cctacttggc agtacatcta cgtattagtc atcgctatta 720acatgacctt atgggacttt cctacttggc agtacatcta cgtattagtc atcgctatta 720
ccatggtcga ggtgagcccc acgttctgct tcactctccc catctccccc ccctccccac 780ccatggtcga ggtgagcccc acgttctgct tcactctccc catctccccc ccctccccac 780
ccccaatttt gtatttattt attttttaat tattttgtgc agcgatgggg gcgggggggg 840ccccaatttt gtatttattt attttttaat tattttgtgc agcgatgggg gcgggggggg 840
ggggggggcg cgcgccaggc ggggcggggc ggggcgaggg gcggggcggg gcgaggcgga 900ggggggggcg cgcgccaggc ggggcggggc ggggcgaggg gcggggcggg gcgaggcgga 900
gaggtgcggc ggcagccaat cagagcggcg cgctccgaaa gtttcctttt atggcgaggc 960gaggtgcggc ggcagccaat cagagcggcg cgctccgaaa gtttcctttt atggcgaggc 960
ggcggcggcg gcggccctat aaaaagcgaa gcgcgcggcg ggcgggagtc gctgcgacgc1020ggcggcggcg gcggccctat aaaaagcgaa gcgcgcggcg ggcgggagtc gctgcgacgc1020
tgccttcgcc ccgtgccccg ctccgccgcc gcctcgcgcc gcccgccccg gctctgactg1080tgccttcgcc ccgtgccccg ctccgccgcc gcctcgcgcc gcccgccccg gctctgactg1080
accgcgttac tcccacaggt gagcgggcgg gacggccctt ctcctccggg ctgtaattag1140accgcgttac tcccacaggt gagcgggcgg gacggccctt ctcctccggg ctgtaattag1140
ctgagcaaga ggtaagggtt taagggatgg ttggttggtg gggtattaat gtttaattac1200ctgagcaaga ggtaagggtt taagggatgg ttggttggtg gggtattaat gtttaattac1200
ctggagcacc tgcctgaaat cacttttttt caggttggac cggtgccacc atggactata1260ctggagcacc tgcctgaaat cacttttttt caggttggac cggtgccacc atggactata1260
aggaccacga cggagactac aaggatcatg atattgatta caaagacgat gacgataaga1320aggaccga cggagactac aaggatcatg atattgatta caaagacgat gacgataaga1320
tggccccaaa gaagaagcgg aaggtcggta tccacggagt cccagcagcc gacaagaagt1380tggccccaaa gaagaagcgg aaggtcggta tccacggagt cccagcagcc gacaagaagt1380
acagcatcgg cctggacatc ggcaccaact ctgtgggctg ggccgtgatc accgacgagt1440acagcatcgg cctggacatc ggcaccaact ctgtgggctg ggccgtgatc accgacgagt1440
acaaggtgcc cagcaagaaa ttcaaggtgc tgggcaacac cgaccggcac agcatcaaga1500acaaggtgcc cagcaagaaa ttcaaggtgc tgggcaacac cgaccggcac agcatcaaga1500
agaacctgat cggagccctg ctgttcgaca gcggcgaaac agccgaggcc acccggctga1560agaacctgat cggagccctg ctgttcgaca gcggcgaaac agccgaggcc acccggctga1560
agagaaccgc cagaagaaga tacaccagac ggaagaaccg gatctgctat ctgcaagaga1620agagaaccgc cagaagaaga tacaccagac ggaagaaccg gatctgctat ctgcaagaga1620
tcttcagcaa cgagatggcc aaggtggacg acagcttctt ccacagactg gaagagtcct1680tcttcagcaa cgagatggcc aaggtggacg acagcttctt ccacagactg gaagagtcct1680
tcctggtgga agaggataag aagcacgagc ggcaccccat cttcggcaac atcgtggacg1740tcctggtgga agaggataag aagcacgagc ggcaccccat cttcggcaac atcgtggacg1740
aggtggccta ccacgagaag taccccacca tctaccacct gagaaagaaa ctggtggaca1800aggtggccta ccacgagaag taccccacca tctaccacct gagaaagaaa ctggtggaca1800
gcaccgacaa ggccgacctg cggctgatct atctggccct ggcccacatg atcaagttcc1860gcaccgacaa ggccgacctg cggctgatct atctggccct ggcccacatg atcaagttcc1860
ggggccactt cctgatcgag ggcgacctga accccgacaa cagcgacgtg gacaagctgt1920ggggccactt cctgatcgag ggcgacctga accccgacaa cagcgacgtg gacaagctgt1920
tcatccagct ggtgcagacc tacaaccagc tgttcgagga aaaccccatc aacgccagcg1980tcatccagct ggtgcagacc tacaaccagc tgttcgagga aaaccccatc aacgccagcg1980
gcgtggacgc caaggccatc ctgtctgcca gactgagcaa gagcagacgg ctggaaaatc2040gcgtggacgc caaggccatc ctgtctgcca gactgagcaa gagcagacgg ctggaaaatc2040
tgatcgccca gctgcccggc gagaagaaga atggcctgtt cggaaacctg attgccctga2100tgatcgccca gctgcccggc gagaagaaga atggcctgtt cggaaacctg attgccctga2100
gcctgggcct gacccccaac ttcaagagca acttcgacct ggccgaggat gccaaactgc2160gcctgggcct gacccccaac ttcaagagca acttcgacct ggccgaggat gccaaactgc2160
agctgagcaa ggacacctac gacgacgacc tggacaacct gctggcccag atcggcgacc2220agctgagcaa ggacacctac gacgacgacc tggacaacct gctggcccag atcggcgacc2220
agtacgccga cctgtttctg gccgccaaga acctgtccga cgccatcctg ctgagcgaca2280agtacgccga cctgtttctg gccgccaaga acctgtccga cgccatcctg ctgagcgaca2280
tcctgagagt gaacaccgag atcaccaagg cccccctgag cgcctctatg atcaagagat2340tcctgagagt gaacaccgag atcaccaagg cccccctgag cgcctctatg atcaagagat2340
acgacgagca ccaccaggac ctgaccctgc tgaaagctct cgtgcggcag cagctgcctg2400acgacgagca ccaccaggac ctgaccctgc tgaaagctct cgtgcggcag cagctgcctg2400
agaagtacaa agagattttc ttcgaccaga gcaagaacgg ctacgccggc tacattgacg2460agaagtacaa agagattttc ttcgaccaga gcaagaacgg ctacgccggc tacattgacg2460
gcggagccag ccaggaagag ttctacaagt tcatcaagcc catcctggaa aagatggacg2520gcggagccag ccaggaagag ttctacaagt tcatcaagcc catcctggaa aagatggacg2520
gcaccgagga actgctcgtg aagctgaaca gagaggacct gctgcggaag cagcggacct2580gcaccgagga actgctcgtg aagctgaaca gagaggacct gctgcggaag cagcggacct2580
tcgacaacgg cagcatcccc caccagatcc acctgggaga gctgcacgcc attctgcggc2640tcgacaacgg cagcatcccc caccagatcc acctgggaga gctgcacgcc attctgcggc2640
ggcaggaaga tttttaccca ttcctgaagg acaaccggga aaagatcgag aagatcctga2700ggcaggaaga tttttaccca ttcctgaagg acaaccggga aaagatcgag aagatcctga2700
ccttccgcat cccctactac gtgggccctc tggccagggg aaacagcaga ttcgcctgga2760ccttccgcat cccctactac gtgggccctc tggccagggg aaacagcaga ttcgcctgga2760
tgaccagaaa gagcgaggaa accatcaccc cctggaactt cgaggaagtg gtggacaagg2820tgaccagaaa gagcgaggaa accatcaccc cctggaactt cgaggaagtg gtggacaagg2820
gcgcttccgc ccagagcttc atcgagcgga tgaccaactt cgataagaac ctgcccaacg2880gcgcttccgc ccagagcttc atcgagcgga tgaccaactt cgataagaac ctgcccaacg2880
agaaggtgct gcccaagcac agcctgctgt acgagtactt caccgtgtat aacgagctga2940agaaggtgct gcccaagcac agcctgctgt acgagtactt caccgtgtat aacgagctga2940
ccaaagtgaa atacgtgacc gagggaatga gaaagcccgc cttcctgagc ggcgagcaga3000ccaaagtgaa atacgtgacc gagggaatga gaaagcccgc cttcctgagc ggcgagcaga3000
aaaaggccat cgtggacctg ctgttcaaga ccaaccggaa agtgaccgtg aagcagctga3060aaaaggccat cgtggacctg ctgttcaaga ccaaccggaa agtgaccgtg aagcagctga3060
aagaggacta cttcaagaaa atcgagtgct tcgactccgt ggaaatctcc ggcgtggaag3120aagaggacta cttcaagaaa atcgagtgct tcgactccgt ggaaatctcc ggcgtggaag3120
atcggttcaa cgcctccctg ggcacatacc acgatctgct gaaaattatc aaggacaagg3180atcggttcaa cgcctccctg ggcacatacc acgatctgct gaaaattatc aaggacaagg3180
acttcctgga caatgaggaa aacgaggaca ttctggaaga tatcgtgctg accctgacac3240acttcctgga caatgaggaa aacgaggaca ttctggaaga tatcgtgctg accctgacac3240
tgtttgagga cagagagatg atcgaggaac ggctgaaaac ctatgcccac ctgttcgacg3300tgtttgagga cagagagatg atcgaggaac ggctgaaaac ctatgcccac ctgttcgacg3300
acaaagtgat gaagcagctg aagcggcgga gatacaccgg ctggggcagg ctgagccgga3360acaaagtgat gaagcagctg aagcggcgga gatacaccgg ctggggcagg ctgagccgga3360
agctgatcaa cggcatccgg gacaagcagt ccggcaagac aatcctggat ttcctgaagt3420agctgatcaa cggcatccgg gacaagcagt ccggcaagac aatcctggat ttcctgaagt3420
ccgacggctt cgccaacaga aacttcatgc agctgatcca cgacgacagc ctgaccttta3480ccgacggctt cgccaacaga aacttcatgc agctgatcca cgacgacagc ctgaccttta3480
aagaggacat ccagaaagcc caggtgtccg gccagggcga tagcctgcac gagcacattg3540aagaggacat ccagaaagcc caggtgtccg gccagggcga tagcctgcac gagcacattg3540
ccaatctggc cggcagcccc gccattaaga agggcatcct gcagacagtg aaggtggtgg3600ccaatctggc cggcagcccc gccattaaga agggcatcct gcagacagtg aaggtggtgg3600
acgagctcgt gaaagtgatg ggccggcaca agcccgagaa catcgtgatc gaaatggcca3660acgagctcgt gaaagtgatg ggccggcaca agcccgagaa catcgtgatc gaaatggcca3660
gagagaacca gaccacccag aagggacaga agaacagccg cgagagaatg aagcggatcg3720gagagaacca gaccacccag aagggacaga agaacagccg cgagagaatg aagcggatcg3720
aagagggcat caaagagctg ggcagccaga tcctgaaaga acaccccgtg gaaaacaccc3780aagagggcat caaagagctg ggcagccaga tcctgaaaga acaccccgtg gaaaacaccc3780
agctgcagaa cgagaagctg tacctgtact acctgcagaa tgggcgggat atgtacgtgg3840agctgcagaa cgagaagctg tacctgtact acctgcagaa tgggcgggat atgtacgtgg3840
accaggaact ggacatcaac cggctgtccg actacgatgt ggaccatatc gtgcctcaga3900accaggaact ggacatcaac cggctgtccg actacgatgt ggaccatatc gtgcctcaga3900
gctttctgaa ggacgactcc atcgacaaca aggtgctgac cagaagcgac aagaaccggg3960gctttctgaa ggacgactcc atcgacaaca aggtgctgac cagaagcgac aagaaccggg3960
gcaagagcga caacgtgccc tccgaagagg tcgtgaagaa gatgaagaac tactggcggc4020gcaagagcga caacgtgccc tccgaagagg tcgtgaagaa gatgaagaac tactggcggc4020
agctgctgaa cgccaagctg attacccaga gaaagttcga caatctgacc aaggccgaga4080agctgctgaa cgccaagctg attacccaga gaaagttcga caatctgacc aaggccgaga4080
gaggcggcct gagcgaactg gataaggccg gcttcatcaa gagacagctg gtggaaaccc4140gaggcggcct gagcgaactg gataaggccg gcttcatcaa gagacagctg gtggaaaccc4140
ggcagatcac aaagcacgtg gcacagatcc tggactcccg gatgaacact aagtacgacg4200ggcagatcac aaagcacgtg gcacagatcc tggactcccg gatgaacact aagtacgacg4200
agaatgacaa gctgatccgg gaagtgaaag tgatcaccct gaagtccaag ctggtgtccg4260agaatgacaa gctgatccgg gaagtgaaag tgatcaccct gaagtccaag ctggtgtccg4260
atttccggaa ggatttccag ttttacaaag tgcgcgagat caacaactac caccacgccc4320atttccggaa ggatttccag ttttacaaag tgcgcgagat caacaactac caccacgccc4320
acgacgccta cctgaacgcc gtcgtgggaa ccgccctgat caaaaagtac cctaagctgg4380acgacgccta cctgaacgcc gtcgtgggaa ccgccctgat caaaaagtac cctaagctgg4380
aaagcgagtt cgtgtacggc gactacaagg tgtacgacgt gcggaagatg atcgccaaga4440aaagcgagtt cgtgtacggc gactacaagg tgtacgacgt gcggaagatg atcgccaaga4440
gcgagcagga aatcggcaag gctaccgcca agtacttctt ctacagcaac atcatgaact4500gcgagcagga aatcggcaag gctaccgcca agtacttctt ctacagcaac atcatgaact4500
ttttcaagac cgagattacc ctggccaacg gcgagatccg gaagcggcct ctgatcgaga4560ttttcaagac cgagattacc ctggccaacg gcgagatccg gaagcggcct ctgatcgaga4560
caaacggcga aaccggggag atcgtgtggg ataagggccg ggattttgcc accgtgcgga4620caaacggcga aaccggggag atcgtgtgggg ataagggccg ggattttgcc accgtgcgga4620
aagtgctgag catgccccaa gtgaatatcg tgaaaaagac cgaggtgcag acaggcggct4680aagtgctgag catgccccaa gtgaatatcg tgaaaaagac cgaggtgcag acaggcggct4680
tcagcaaaga gtctatcctg cccaagagga acagcgataa gctgatcgcc agaaagaagg4740tcagcaaaga gtctatcctg cccaagagga acagcgataa gctgatcgcc agaaagaagg4740
actgggaccc taagaagtac ggcggcttcg acagccccac cgtggcctat tctgtgctgg4800actgggaccc taagaagtac ggcggcttcg acagccccac cgtggcctat tctgtgctgg4800
tggtggccaa agtggaaaag ggcaagtcca agaaactgaa gagtgtgaaa gagctgctgg4860tggtggccaa agtggaaaag ggcaagtcca agaaactgaa gagtgtgaaa gagctgctgg4860
ggatcaccat catggaaaga agcagcttcg agaagaatcc catcgacttt ctggaagcca4920ggatcaccat catggaaaga agcagcttcg agaagaatcc catcgacttt ctggaagcca4920
agggctacaa agaagtgaaa aaggacctga tcatcaagct gcctaagtac tccctgttcg4980agggctacaa agaagtgaaa aaggacctga tcatcaagct gcctaagtac tccctgttcg4980
agctggaaaa cggccggaag agaatgctgg cctctgccgg cgaactgcag aagggaaacg5040agctggaaaa cggccggaag agaatgctgg cctctgccgg cgaactgcag aagggaaacg5040
aactggccct gccctccaaa tatgtgaact tcctgtacct ggccagccac tatgagaagc5100aactggccct gccctccaaa tatgtgaact tcctgtacct ggccagccac tatgagaagc5100
tgaagggctc ccccgaggat aatgagcaga aacagctgtt tgtggaacag cacaagcact5160tgaagggctc ccccgaggat aatgagcaga aacagctgtt tgtggaacag cacaagcact5160
acctggacga gatcatcgag cagatcagcg agttctccaa gagagtgatc ctggccgacg5220acctggacga gatcatcgag cagatcagcg agttctccaa gagagtgatc ctggccgacg5220
ctaatctgga caaagtgctg tccgcctaca acaagcaccg ggataagccc atcagagagc5280ctaatctgga caaagtgctg tccgcctaca acaagcaccg ggataagccc atcagagagc5280
aggccgagaa tatcatccac ctgtttaccc tgaccaatct gggagcccct gccgccttca5340aggccgagaa tatcatccac ctgtttaccc tgaccaatct gggagcccct gccgccttca5340
agtactttga caccaccatc gaccggaaga ggtacaccag caccaaagag gtgctggacg5400agtactttga caccaccatc gaccggaaga ggtacaccag caccaaagag gtgctggacg5400
ccaccctgat ccaccagagc atcaccggcc tgtacgagac acggatcgac ctgtctcagc5460ccaccctgat ccaccagagc atcaccggcc tgtacgagac acggatcgac ctgtctcagc5460
tgggaggcga caaaaggccg gcggccacga aaaaggccgg ccaggcaaaa aagaaaaagt5520tgggaggcga caaaaggccg gcggccacga aaaaggccgg ccaggcaaaa aagaaaaagt5520
aagaattcct agagctcgct gatcagcctc gactgtgcct tctagttgcc agccatctgt5580aagaattcct agagctcgct gatcagcctc gactgtgcct tctagttgcc agccatctgt5580
tgtttgcccc tcccccgtgc cttccttgac cctggaaggt gccactccca ctgtcctttc5640tgtttgcccc tcccccgtgc cttccttgac cctggaaggt gccactccca ctgtcctttc5640
ctaataaaat gaggaaattg catcgcattg tctgagtagg tgtcattcta ttctgggggg5700ctaataaaat gaggaaattg catcgcattg tctgagtagg tgtcattcta ttctgggggg5700
tggggtgggg caggacagca agggggagga ttgggaagag aatagcaggc atgctgggga5760tggggtgggg caggacagca aggggggagga ttgggaagag aatagcaggc atgctgggga5760
gcggccgcag gaacccctag tgatggagtt ggccactccc tctctgcgcg ctcgctcgct5820gcggccgcag gaacccctag tgatggagtt ggccactccc tctctgcgcg ctcgctcgct5820
cactgaggcc gggcgaccaa aggtcgcccg acgcccgggc tttgcccggg cggcctcagt5880cactgaggcc gggcgaccaa aggtcgcccg acgcccgggc tttgcccggg cggcctcagt5880
gagcgagcga gcgcgcagct gcctgcaggg gcgcctgatg cggtattttc tccttacgca5940gagcgagcga gcgcgcagct gcctgcaggg gcgcctgatg cggtattttc tccttacgca5940
tctgtgcggt atttcacacc gcatacgtca aagcaaccat agtacgcgcc ctgtagcggc6000tctgtgcggt atttcacacc gcatacgtca aagcaaccat agtacgcgcc ctgtagcggc6000
gcattaagcg cggcgggtgt ggtggttacg cgcagcgtga ccgctacact tgccagcgcc6060gcattaagcg cggcgggtgt ggtggttacg cgcagcgtga ccgctacact tgccagcgcc6060
ctagcgcccg ctcctttcgc tttcttccct tcctttctcg ccacgttcgc cggctttccc6120ctagcgcccg ctcctttcgc tttcttccct tcctttctcg ccacgttcgc cggctttccc6120
cgtcaagctc taaatcgggg gctcccttta gggttccgat ttagtgcttt acggcacctc6180cgtcaagctc taaatcgggg gctcccttta gggttccgat ttagtgcttt acggcacctc6180
gaccccaaaa aacttgattt gggtgatggt tcacgtagtg ggccatcgcc ctgatagacg6240gaccccaaaa aacttgattt gggtgatggt tcacgtagtg ggccatcgcc ctgatagacg6240
gtttttcgcc ctttgacgtt ggagtccacg ttctttaata gtggactctt gttccaaact6300gtttttcgcc ctttgacgtt gagtccacg ttctttaata gtggactctt gttccaaact6300
ggaacaacac tcaaccctat ctcgggctat tcttttgatt tataagggat tttgccgatt6360ggaacaacac tcaaccctat ctcgggctat tcttttgatt tataagggat tttgccgatt6360
tcggcctatt ggttaaaaaa tgagctgatt taacaaaaat ttaacgcgaa ttttaacaaa6420tcggcctatt ggttaaaaaa tgagctgatt taacaaaaat ttaacgcgaa ttttaacaaa6420
atattaacgt ttacaatttt atggtgcact ctcagtacaa tctgctctga tgccgcatag6480atattaacgt ttacaatttt atggtgcact ctcagtacaa tctgctctga tgccgcatag6480
ttaagccagc cccgacaccc gccaacaccc gctgacgcgc cctgacgggc ttgtctgctc6540ttaagccagc cccgacaccc gccaacaccc gctgacgcgc cctgacgggc ttgtctgctc6540
ccggcatccg cttacagaca agctgtgacc gtctccggga gctgcatgtg tcagaggttt6600ccggcatccg cttacagaca agctgtgacc gtctccggga gctgcatgtg tcagaggttt6600
tcaccgtcat caccgaaacg cgcgagacga aagggcctcg tgatacgcct atttttatag6660tcaccgtcat caccgaaacg cgcgagacga aagggcctcg tgatacgcct atttttatag6660
gttaatgtca tgataataat ggtttcttag acgtcaggtg gcacttttcg gggaaatgtg6720gttaatgtca tgataataat ggtttcttag acgtcaggtg gcacttttcg gggaaatgtg6720
cgcggaaccc ctatttgttt atttttctaa atacattcaa atatgtatcc gctcatgaga6780cgcggaaccc ctatttgttt atttttctaa atacattcaa atatgtatcc gctcatgaga6780
caataaccct gataaatgct tcaataatat tgaaaaagga agagtatgag tattcaacat6840caataaccct gataaatgct tcaataatat tgaaaaagga agagtatgag tattcaacat6840
ttccgtgtcg cccttattcc cttttttgcg gcattttgcc ttcctgtttt tgctcaccca6900ttccgtgtcg cccttattcc cttttttgcg gcattttgcc ttcctgtttt tgctcaccca6900
gaaacgctgg tgaaagtaaa agatgctgaa gatcagttgg gtgcacgagt gggttacatc6960gaaacgctgg tgaaagtaaa agatgctgaa gatcagttgg gtgcacgagt gggttacatc6960
gaactggatc tcaacagcgg taagatcctt gagagttttc gccccgaaga acgttttcca7020gaactggatc tcaacagcgg taagatcctt gagagttttc gccccgaaga acgttttcca7020
atgatgagca cttttaaagt tctgctatgt ggcgcggtat tatcccgtat tgacgccggg7080atgatgagca cttttaaagt tctgctatgt ggcgcggtat tatcccgtat tgacgccggg7080
caagagcaac tcggtcgccg catacactat tctcagaatg acttggttga gtactcacca7140caagagcaac tcggtcgccg catacactat tctcagaatg acttggttga gtactcacca7140
gtcacagaaa agcatcttac ggatggcatg acagtaagag aattatgcag tgctgccata7200gtcacagaaa agcatcttac ggatggcatg acagtaagag aattatgcag tgctgccata7200
accatgagtg ataacactgc ggccaactta cttctgacaa cgatcggagg accgaaggag7260accatgagtg ataacactgc ggccaactta cttctgacaa cgatcggagg accgaaggag7260
ctaaccgctt ttttgcacaa catgggggat catgtaactc gccttgatcg ttgggaaccg7320ctaaccgctt ttttgcacaa catggggat catgtaactc gccttgatcg ttgggaaccg7320
gagctgaatg aagccatacc aaacgacgag cgtgacacca cgatgcctgt agcaatggca7380gagctgaatg aagccatacc aaacgacgag cgtgacacca cgatgcctgt agcaatggca7380
acaacgttgc gcaaactatt aactggcgaa ctacttactc tagcttcccg gcaacaatta7440acaacgttgc gcaaactatt aactggcgaa ctacttactc tagcttcccg gcaacaatta7440
atagactgga tggaggcgga taaagttgca ggaccacttc tgcgctcggc ccttccggct7500atagactgga tggaggcgga taaagttgca ggaccacttc tgcgctcggc ccttccggct7500
ggctggttta ttgctgataa atctggagcc ggtgagcgtg gaagccgcgg tatcattgca7560ggctggttta ttgctgataa atctggagcc ggtgagcgtg gaagccgcgg tatcattgca7560
gcactggggc cagatggtaa gccctcccgt atcgtagtta tctacacgac ggggagtcag7620gcactggggc cagatggtaa gccctcccgt atcgtagtta tctacacgac ggggagtcag7620
gcaactatgg atgaacgaaa tagacagatc gctgagatag gtgcctcact gattaagcat7680gcaactatgg atgaacgaaa tagacagatc gctgagatag gtgcctcact gattaagcat7680
tggtaactgt cagaccaagt ttactcatat atactttaga ttgatttaaa acttcatttt7740tggtaactgt cagaccaagt ttactcatat atactttaga ttgattaaa acttcatttt7740
taatttaaaa ggatctaggt gaagatcctt tttgataatc tcatgaccaa aatcccttaa7800taatttaaaa ggatctaggt gaagatcctt tttgataatc tcatgaccaa aatcccttaa7800
cgtgagtttt cgttccactg agcgtcagac cccgtagaaa agatcaaagg atcttcttga7860cgtgagtttt cgttccactg agcgtcagac cccgtagaaa agatcaaagg atcttcttga7860
gatccttttt ttctgcgcgt aatctgctgc ttgcaaacaa aaaaaccacc gctaccagcg7920gatccttttt ttctgcgcgt aatctgctgc ttgcaaacaa aaaaaccacc gctaccagcg7920
gtggtttgtt tgccggatca agagctacca actctttttc cgaaggtaac tggcttcagc7980gtggtttgtt tgccggatca agagctacca actctttttc cgaaggtaac tggcttcagc7980
agagcgcaga taccaaatac tgtccttcta gtgtagccgt agttaggcca ccacttcaag8040agagcgcaga taccaaatac tgtccttcta gtgtagccgt agttaggcca ccacttcaag8040
aactctgtag caccgcctac atacctcgct ctgctaatcc tgttaccagt ggctgctgcc8100aactctgtag caccgcctac atacctcgct ctgctaatcc tgttaccagt ggctgctgcc8100
agtggcgata agtcgtgtct taccgggttg gactcaagac gatagttacc ggataaggcg8160agtggcgata agtcgtgtct taccgggttg gactcaagac gtagttacc ggataaggcg8160
cagcggtcgg gctgaacggg gggttcgtgc acacagccca gcttggagcg aacgacctac8220cagcggtcgg gctgaacggg gggttcgtgc acacagccca gcttggagcg aacgacctac8220
accgaactga gatacctaca gcgtgagcta tgagaaagcg ccacgcttcc cgaagggaga8280accgaactga gatacctaca gcgtgagcta tgagaaagcg ccacgcttcc cgaagggaga8280
aaggcggaca ggtatccggt aagcggcagg gtcggaacag gagagcgcac gagggagctt8340aaggcggaca ggtatccggt aagcggcagg gtcggaacag gagagcgcac gagggagctt8340
ccagggggaa acgcctggta tctttatagt cctgtcgggt ttcgccacct ctgacttgag8400ccagggggaa acgcctggta tctttatagt cctgtcgggt ttcgccacct ctgacttgag8400
cgtcgatttt tgtgatgctc gtcagggggg cggagcctat ggaaaaacgc cagcaacgcg8460cgtcgatttt tgtgatgctc gtcagggggg cggagcctat ggaaaaacgc cagcaacgcg8460
gcctttttac ggttcctggc cttttgctgg ccttttgctc acatgt 8506gcctttttac ggttcctggc cttttgctgg ccttttgctc acatgt 8506
<210> 4<210> 4
<211> 23<211> 23
<212> DNA<212>DNA
<213> 人工序列(2 Ambystoma laterale x Ambystoma jeffersonianum)<213> Artificial sequence (2 Ambystoma laterale x Ambystoma jeffersonianum)
<400> 4<400> 4
atgcaggaga acctggcccc ctg 23atgcaggaga acctggcccc ctg 23
<210> 5<210> 5
<211> 22<211> 22
<212> DNA<212>DNA
<213> 人工序列(2 Ambystoma laterale x Ambystoma jeffersonianum)<213> Artificial sequence (2 Ambystoma laterale x Ambystoma jeffersonianum)
<400> 5<400> 5
caggcagctc acgctcctct cg 22caggcagctc acgctcctct cg 22
<210> 6<210> 6
<211> 20<211> 20
<212> DNA<212>DNA
<213> 人工序列(2 Ambystoma laterale x Ambystoma jeffersonianum)<213> Artificial sequence (2 Ambystoma laterale x Ambystoma jeffersonianum)
<400> 6<400> 6
aatgcccagc ccttactaca 20aatgcccagc cctactaca 20
<210> 7<210> 7
<211> 20<211> 20
<212> DNA<212>DNA
<213> 人工序列(2 Ambystoma laterale x Ambystoma jeffersonianum)<213> Artificial sequence (2 Ambystoma laterale x Ambystoma jeffersonianum)
<400> 7<400> 7
tgcatggaag ccatcacact 20tgcatggaag ccatcacact 20
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