DK2631336T3 - DNA-bibliotek og fremgangsmåde til fremstilling heraf samt fremgangsmåde og anordning til detektering af SNP - Google Patents

DNA-bibliotek og fremgangsmåde til fremstilling heraf samt fremgangsmåde og anordning til detektering af SNP Download PDF

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DK2631336T3
DK2631336T3 DK11843141.0T DK11843141T DK2631336T3 DK 2631336 T3 DK2631336 T3 DK 2631336T3 DK 11843141 T DK11843141 T DK 11843141T DK 2631336 T3 DK2631336 T3 DK 2631336T3
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dna
library
present disclosure
sequencing
snps
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DK11843141.0T
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Ye Du
Meiru Zhao
Ying Chen
Jinghua Wu
Geng Tian
Jun Wang
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Bgi Tech Solutions Co Ltd
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    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
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    • C12Q1/6813Hybridisation assays
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    • C12N15/10Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/1034Isolating an individual clone by screening libraries
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    • C12Q2521/00Reaction characterised by the enzymatic activity
    • C12Q2521/30Phosphoric diester hydrolysing, i.e. nuclease
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    • C12Q2525/00Reactions involving modified oligonucleotides, nucleic acids, or nucleotides
    • C12Q2525/10Modifications characterised by
    • C12Q2525/191Modifications characterised by incorporating an adaptor

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Claims (8)

1. Fremgangsmåde til fremstilling af et DNA-bibliotek, hvilken fremgangsmåde omfatter følgende trin: fordøjelse af en genomisk DNA-prøve ved anvendelse af en restriktionsendonuklease udvalgt fra: (1) Mbo II (2) Mbo II og Hind III, (3) Mbo II og Bcc I eller (4) Tsp 451 for at opnå et fordøjet produkt; fraseparering af det fordøjede produkt for at opnå DNA-fragmenter med en længde på 100 bp til 1000 bp\ ende-reparation af DNA-fragmenteme for at opnå ende-reparerede DNA-fragmenter; tilføjelse af en base A til enden af de ende-reparerede DNA-fragmenter for at opnå DNA-fragmenter med en terminal base A; og ligering af DNA-fragmenteme med den terminale base A med sekvenseringsadaptere for at opnå DNA-biblioteket.
2. Fremgangsmåde ifølge krav 1, hvor det fordøjede produkt frasepareres ved hjælp af agarose-gelelektroforese og genvinding ved gelskæring.
3. Fremgangsmåde ifølge krav 1, hvor DNA-fragmenteme har en længde på 200 bp til 700 bp.
4. Fremgangsmåde til opnåelse af genomiske sekvensinformationer fra en prøve af genomisk DNA, hvilken fremgangsmåde omfatter opbygning af et DNA-bibliotek i henhold til en fremgangsmåde ifølge et hvilket som helst af kravene 1 til 3 og sekvensering af DNA-biblioteket for at opnå DNA-sekvensinformationeme.
5. Fremgangsmåde ifølge krav 4, hvor DNA-biblioteket sekvenseres på en sekvenseringsplatform udvalgt fra Illumina, Roche 454 og SOLID.
6. Fremgangsmåde ifølge krav 4 eller krav 5, hvilken fremgangsmåde endvidere omfatter et trin med udsættelse af DNA-sekvensinformationer for SNP-dataanalyse for at opnå SNP-informationer.
7. Fremgangsmåde ifølge krav 6, hvilken fremgangsmåde endvidere omfatter genotypebestemmelse af prøven baseret på SNP-informationeme.
8. Kit til detektering af SNP omfattende restriktionsendonukleaser udvalgt fra (1) Mbo II og Hind III eller (2) Mbo II og Bcc I.
DK11843141.0T 2010-11-23 2011-09-21 DNA-bibliotek og fremgangsmåde til fremstilling heraf samt fremgangsmåde og anordning til detektering af SNP DK2631336T3 (da)

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CN201010555192.4A CN102061526B (zh) 2010-11-23 2010-11-23 一种DNA文库及其制备方法、以及一种检测SNPs的方法和装置
PCT/CN2011/079971 WO2012068919A1 (zh) 2010-11-23 2011-09-21 DNA文库及其制备方法、以及检测SNPs的方法和装置

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US20130288907A1 (en) 2013-10-31
EP2631336A4 (en) 2013-10-16
CN102061526B (zh) 2014-04-30
CN102061526A (zh) 2011-05-18
EP2631336B1 (en) 2014-11-19
US9493821B2 (en) 2016-11-15
EP2631336A1 (en) 2013-08-28
WO2012068919A1 (zh) 2012-05-31

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