DK3495498T3 - Genekspressionsanalyse i enkeltceller - Google Patents

Genekspressionsanalyse i enkeltceller Download PDF

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Publication number
DK3495498T3
DK3495498T3 DK18201978.6T DK18201978T DK3495498T3 DK 3495498 T3 DK3495498 T3 DK 3495498T3 DK 18201978 T DK18201978 T DK 18201978T DK 3495498 T3 DK3495498 T3 DK 3495498T3
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gene expression
single cells
expression analysis
analysis
cells
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DK18201978.6T
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Sten Linnarsson
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Illumina Inc
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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/10Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/1034Isolating an individual clone by screening libraries
    • C12N15/1065Preparation or screening of tagged libraries, e.g. tagged microorganisms by STM-mutagenesis, tagged polynucleotides, gene tags
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/10Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/1096Processes for the isolation, preparation or purification of DNA or RNA cDNA Synthesis; Subtracted cDNA library construction, e.g. RT, RT-PCR

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  • Life Sciences & Earth Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Health & Medical Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Organic Chemistry (AREA)
  • Zoology (AREA)
  • Biomedical Technology (AREA)
  • Wood Science & Technology (AREA)
  • Biotechnology (AREA)
  • General Engineering & Computer Science (AREA)
  • Crystallography & Structural Chemistry (AREA)
  • Plant Pathology (AREA)
  • Molecular Biology (AREA)
  • Microbiology (AREA)
  • Biophysics (AREA)
  • Physics & Mathematics (AREA)
  • Biochemistry (AREA)
  • General Health & Medical Sciences (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
DK18201978.6T 2009-03-30 2010-03-23 Genekspressionsanalyse i enkeltceller DK3495498T3 (da)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US16475909P 2009-03-30 2009-03-30
EP15190426.5A EP3002337B1 (en) 2009-03-30 2010-03-23 Gene expression analysis in single cells

Publications (1)

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DK3495498T3 true DK3495498T3 (da) 2022-01-17

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DK15190426.5T DK3002337T3 (da) 2009-03-30 2010-03-23 Analyse af udtryk af gener i enkeltceller
DK18201978.6T DK3495498T3 (da) 2009-03-30 2010-03-23 Genekspressionsanalyse i enkeltceller
DK10762102.1T DK2414548T3 (da) 2009-03-30 2010-03-23 Genekspressionsanalyse i enkeltceller

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DK15190426.5T DK3002337T3 (da) 2009-03-30 2010-03-23 Analyse af udtryk af gener i enkeltceller

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DK10762102.1T DK2414548T3 (da) 2009-03-30 2010-03-23 Genekspressionsanalyse i enkeltceller

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US (1) US20120010091A1 (da)
EP (4) EP3002337B1 (da)
DK (3) DK3002337T3 (da)
ES (3) ES2555389T3 (da)
WO (1) WO2010117620A2 (da)

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