EA001095B1 - Компьютерный способ создания химических структур, имеющих общие функциональные характеристики - Google Patents

Компьютерный способ создания химических структур, имеющих общие функциональные характеристики Download PDF

Info

Publication number
EA001095B1
EA001095B1 EA199800843A EA199800843A EA001095B1 EA 001095 B1 EA001095 B1 EA 001095B1 EA 199800843 A EA199800843 A EA 199800843A EA 199800843 A EA199800843 A EA 199800843A EA 001095 B1 EA001095 B1 EA 001095B1
Authority
EA
Eurasian Patent Office
Prior art keywords
affinity
receptor
genotype
target
molecular
Prior art date
Application number
EA199800843A
Other languages
English (en)
Russian (ru)
Other versions
EA199800843A1 (ru
Inventor
Джонатан М. Шмидт
Original Assignee
Юниверсити Оф Гуелф
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Юниверсити Оф Гуелф filed Critical Юниверсити Оф Гуелф
Publication of EA199800843A1 publication Critical patent/EA199800843A1/ru
Publication of EA001095B1 publication Critical patent/EA001095B1/ru

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K1/00General methods for the preparation of peptides, i.e. processes for the organic chemical preparation of peptides or proteins of any length
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/30Detection of binding sites or motifs
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B15/00ICT specially adapted for analysing two-dimensional [2D] or three-dimensional [3D] molecular structures, e.g. structural or functional relations or structure alignment
    • G16B15/30Drug targeting using structural data; Docking or binding prediction
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/20Allele or variant detection, e.g. single nucleotide polymorphism [SNP] detection
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/50Mutagenesis
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16CCOMPUTATIONAL CHEMISTRY; CHEMOINFORMATICS; COMPUTATIONAL MATERIALS SCIENCE
    • G16C20/00Chemoinformatics, i.e. ICT specially adapted for the handling of physicochemical or structural data of chemical particles, elements, compounds or mixtures
    • G16C20/50Molecular design, e.g. of drugs
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B15/00ICT specially adapted for analysing two-dimensional [2D] or three-dimensional [3D] molecular structures, e.g. structural or functional relations or structure alignment
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations

Landscapes

  • Health & Medical Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Physics & Mathematics (AREA)
  • Chemical & Material Sciences (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • General Health & Medical Sciences (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Theoretical Computer Science (AREA)
  • Biophysics (AREA)
  • Biotechnology (AREA)
  • Evolutionary Biology (AREA)
  • Medical Informatics (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Molecular Biology (AREA)
  • Genetics & Genomics (AREA)
  • Analytical Chemistry (AREA)
  • Medicinal Chemistry (AREA)
  • Pharmacology & Pharmacy (AREA)
  • Crystallography & Structural Chemistry (AREA)
  • Organic Chemistry (AREA)
  • Computing Systems (AREA)
  • Biochemistry (AREA)
  • Information Retrieval, Db Structures And Fs Structures Therefor (AREA)
  • Organic Low-Molecular-Weight Compounds And Preparation Thereof (AREA)
  • Saccharide Compounds (AREA)
EA199800843A 1996-03-22 1996-03-22 Компьютерный способ создания химических структур, имеющих общие функциональные характеристики EA001095B1 (ru)

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
PCT/CA1996/000166 WO1997036252A1 (en) 1996-03-22 1996-03-22 Computational method for designing chemical structures having common functional characteristics

Publications (2)

Publication Number Publication Date
EA199800843A1 EA199800843A1 (ru) 1999-02-25
EA001095B1 true EA001095B1 (ru) 2000-10-30

Family

ID=4173144

Family Applications (1)

Application Number Title Priority Date Filing Date
EA199800843A EA001095B1 (ru) 1996-03-22 1996-03-22 Компьютерный способ создания химических структур, имеющих общие функциональные характеристики

Country Status (4)

Country Link
EP (1) EP0888591A1 (ja)
JP (1) JP2000507940A (ja)
EA (1) EA001095B1 (ja)
WO (1) WO1997036252A1 (ja)

Families Citing this family (9)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO1998038208A2 (en) * 1997-02-28 1998-09-03 Bearsden Bio, Inc. Method of determining protein-ligand interactions via computer modeling
WO2002041184A1 (en) * 2000-11-14 2002-05-23 Kyorin Pharmaceutical Co., Ltd. Method of searching for novel lead compound
AU2001215557A1 (en) * 2000-11-30 2002-06-11 Toyo Suisan Kaisha, Ltd. Method of designing the molecular structure of inhibitor to enzyme
EP1535235A1 (en) * 2002-05-28 2005-06-01 The Trustees of The University of Pennsylvania Methods, systems, and computer program products for computational analysis and design of amphiphilic polymers
JP4572304B2 (ja) 2004-01-27 2010-11-04 独立行政法人情報通信研究機構 化学的遺伝プログラミング装置および化学的遺伝プログラミング方法
GB0518558D0 (en) * 2005-09-12 2005-10-19 Givaudan Sa Improvements in or related to organic compounds
US20180137256A1 (en) * 2016-11-16 2018-05-17 Paul MERRITHEW System and method of calculating the structure and properties of chemicals
JP7590697B2 (ja) 2019-08-19 2024-11-27 Jsr株式会社 化学構造発生装置、化学構造発生プログラム、及び化学構造発生方法
JP7619443B2 (ja) * 2021-04-20 2025-01-22 富士通株式会社 情報処理プログラム、情報処理方法および情報処理装置

Family Cites Families (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5025388A (en) * 1988-08-26 1991-06-18 Cramer Richard D Iii Comparative molecular field analysis (CoMFA)
US5434796A (en) * 1993-06-30 1995-07-18 Daylight Chemical Information Systems, Inc. Method and apparatus for designing molecules with desired properties by evolving successive populations

Also Published As

Publication number Publication date
EA199800843A1 (ru) 1999-02-25
AU712188B2 (en) 1999-10-28
JP2000507940A (ja) 2000-06-27
WO1997036252A1 (en) 1997-10-02
EP0888591A1 (en) 1999-01-07
AU4935096A (en) 1997-10-17

Similar Documents

Publication Publication Date Title
Perelson Immune network theory
US6219622B1 (en) Computational method for designing chemical structures having common functional characteristics
Bicanski et al. Neuronal vector coding in spatial cognition
Jaszkiewicz et al. The ‘Light Beam Search’approach–an overview of methodology applications
Kauffman et al. The NK model of rugged fitness landscapes and its application to maturation of the immune response
Rybak et al. Modeling neural mechanisms for genesis of respiratory rhythm and pattern. II. Network models of the central respiratory pattern generator
Kuleff et al. Charge migration in different conformers of glycine: The role of nuclear geometry
Monmarché et al. On how Pachycondyla apicalis ants suggest a new search algorithm
Barry et al. The boundary vector cell model of place cell firing and spatial memory
US5699268A (en) Computational method for designing chemical structures having common functional characteristics
Shelokar et al. An ant colony approach for clustering
Ruxton et al. Fitness‐dependent dispersal in metapopulations and its consequences for persistence and synchrony
EA001095B1 (ru) Компьютерный способ создания химических структур, имеющих общие функциональные характеристики
Morris Optimally foraging deer mice in prairie mosaics: a test of habitat theory and absence of landscape effects
Gasteiger et al. Neural networks as data mining tools in drug design
Kauffman et al. Search strategies for applied molecular evolution
Hornby A steady-state version of the age-layered population structure EA
Wilson et al. PRISM: automated crystallographic phase refinement by iterative skeletonization
Bernard et al. Comparison of chemical databases: Analysis of molecular diversity with Self Organising Maps (SOM)
Zaman et al. Using subpopulation EAs to map molecular structure landscapes
Castiglione et al. A network of cellular automata for the simulation of the immune system
Cazenave et al. Parallel nested monte-carlo search
AU712188C (en) Computational method for designing chemical structures having common functional characteristics
Fushing et al. Testing and mapping non-stationarity in animal behavioral processes: A case study on an individual female bean weevil
Manavi et al. Simulation and analysis of antibody aggregation on cell surfaces using motion planning and graph analysis

Legal Events

Date Code Title Description
MM4A Lapse of a eurasian patent due to non-payment of renewal fees within the time limit in the following designated state(s)

Designated state(s): AM AZ BY KZ KG MD TJ TM RU