EP0765477A4 - Harze für die testphasen-synthese - Google Patents
Harze für die testphasen-syntheseInfo
- Publication number
- EP0765477A4 EP0765477A4 EP95922224A EP95922224A EP0765477A4 EP 0765477 A4 EP0765477 A4 EP 0765477A4 EP 95922224 A EP95922224 A EP 95922224A EP 95922224 A EP95922224 A EP 95922224A EP 0765477 A4 EP0765477 A4 EP 0765477A4
- Authority
- EP
- European Patent Office
- Prior art keywords
- optionally substituted
- optionally
- resin
- compound
- substimted
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Withdrawn
Links
- 229920005989 resin Polymers 0.000 title claims description 212
- 239000011347 resin Substances 0.000 title claims description 212
- 238000003786 synthesis reaction Methods 0.000 title abstract description 22
- 230000015572 biosynthetic process Effects 0.000 title abstract description 21
- 239000007787 solid Substances 0.000 title description 7
- 150000001875 compounds Chemical class 0.000 claims abstract description 298
- 238000000034 method Methods 0.000 claims abstract description 67
- 239000002952 polymeric resin Substances 0.000 claims abstract description 28
- 229920003002 synthetic resin Polymers 0.000 claims abstract description 28
- 239000000543 intermediate Substances 0.000 claims description 80
- -1 sulfur anion Chemical class 0.000 claims description 50
- 125000000217 alkyl group Chemical group 0.000 claims description 42
- IJGRMHOSHXDMSA-UHFFFAOYSA-N Atomic nitrogen Chemical compound N#N IJGRMHOSHXDMSA-UHFFFAOYSA-N 0.000 claims description 41
- 125000001072 heteroaryl group Chemical group 0.000 claims description 36
- 125000003107 substituted aryl group Chemical group 0.000 claims description 36
- 229910052739 hydrogen Inorganic materials 0.000 claims description 35
- 239000001257 hydrogen Substances 0.000 claims description 35
- 125000003710 aryl alkyl group Chemical group 0.000 claims description 34
- 125000005842 heteroatom Chemical group 0.000 claims description 34
- 125000003118 aryl group Chemical group 0.000 claims description 33
- 229910052799 carbon Inorganic materials 0.000 claims description 31
- 125000004446 heteroarylalkyl group Chemical group 0.000 claims description 31
- 125000005343 heterocyclic alkyl group Chemical group 0.000 claims description 29
- 125000004404 heteroalkyl group Chemical group 0.000 claims description 28
- 125000000623 heterocyclic group Chemical group 0.000 claims description 28
- 229910052757 nitrogen Inorganic materials 0.000 claims description 26
- 125000004122 cyclic group Chemical group 0.000 claims description 24
- 229920006395 saturated elastomer Polymers 0.000 claims description 24
- 125000005346 substituted cycloalkyl group Chemical group 0.000 claims description 24
- 125000000547 substituted alkyl group Chemical group 0.000 claims description 22
- 125000004426 substituted alkynyl group Chemical group 0.000 claims description 22
- 229910052760 oxygen Inorganic materials 0.000 claims description 21
- OKTJSMMVPCPJKN-UHFFFAOYSA-N Carbon Chemical group [C] OKTJSMMVPCPJKN-UHFFFAOYSA-N 0.000 claims description 20
- 125000005647 linker group Chemical group 0.000 claims description 20
- 229920000642 polymer Polymers 0.000 claims description 20
- 125000001424 substituent group Chemical group 0.000 claims description 20
- UFHFLCQGNIYNRP-UHFFFAOYSA-N Hydrogen Chemical compound [H][H] UFHFLCQGNIYNRP-UHFFFAOYSA-N 0.000 claims description 19
- 125000005017 substituted alkenyl group Chemical group 0.000 claims description 19
- 239000000203 mixture Substances 0.000 claims description 16
- 102000005962 receptors Human genes 0.000 claims description 16
- 108020003175 receptors Proteins 0.000 claims description 16
- 229910052717 sulfur Inorganic materials 0.000 claims description 16
- 150000002431 hydrogen Chemical group 0.000 claims description 15
- 238000003556 assay Methods 0.000 claims description 13
- VEXZGXHMUGYJMC-UHFFFAOYSA-N Hydrochloric acid Chemical compound Cl VEXZGXHMUGYJMC-UHFFFAOYSA-N 0.000 claims description 12
- 239000000460 chlorine Substances 0.000 claims description 12
- 229940124530 sulfonamide Drugs 0.000 claims description 12
- 239000004793 Polystyrene Substances 0.000 claims description 11
- 229920002223 polystyrene Polymers 0.000 claims description 11
- 125000003342 alkenyl group Chemical group 0.000 claims description 10
- QVGXLLKOCUKJST-UHFFFAOYSA-N atomic oxygen Chemical compound [O] QVGXLLKOCUKJST-UHFFFAOYSA-N 0.000 claims description 10
- 125000003178 carboxy group Chemical group [H]OC(*)=O 0.000 claims description 10
- 229910052801 chlorine Inorganic materials 0.000 claims description 10
- 125000002915 carbonyl group Chemical group [*:2]C([*:1])=O 0.000 claims description 9
- 229910052736 halogen Inorganic materials 0.000 claims description 9
- 150000002367 halogens Chemical class 0.000 claims description 9
- 239000001301 oxygen Substances 0.000 claims description 9
- 238000012216 screening Methods 0.000 claims description 9
- 238000012360 testing method Methods 0.000 claims description 9
- 125000001309 chloro group Chemical group Cl* 0.000 claims description 7
- 125000000753 cycloalkyl group Chemical group 0.000 claims description 7
- 230000000694 effects Effects 0.000 claims description 7
- 125000002887 hydroxy group Chemical group [H]O* 0.000 claims description 7
- 125000000956 methoxy group Chemical group [H]C([H])([H])O* 0.000 claims description 7
- 125000000449 nitro group Chemical group [O-][N+](*)=O 0.000 claims description 7
- 239000007868 Raney catalyst Substances 0.000 claims description 6
- NPXOKRUENSOPAO-UHFFFAOYSA-N Raney nickel Chemical compound [Al].[Ni] NPXOKRUENSOPAO-UHFFFAOYSA-N 0.000 claims description 6
- 229910000564 Raney nickel Inorganic materials 0.000 claims description 6
- 125000000304 alkynyl group Chemical group 0.000 claims description 6
- 239000002532 enzyme inhibitor Substances 0.000 claims description 6
- 239000011593 sulfur Substances 0.000 claims description 6
- WKBOTKDWSSQWDR-UHFFFAOYSA-N Bromine atom Chemical group [Br] WKBOTKDWSSQWDR-UHFFFAOYSA-N 0.000 claims description 5
- GDTBXPJZTBHREO-UHFFFAOYSA-N bromine Chemical group BrBr GDTBXPJZTBHREO-UHFFFAOYSA-N 0.000 claims description 5
- 229910052794 bromium Inorganic materials 0.000 claims description 5
- 238000006073 displacement reaction Methods 0.000 claims description 5
- PNDPGZBMCMUPRI-UHFFFAOYSA-N iodine Chemical group II PNDPGZBMCMUPRI-UHFFFAOYSA-N 0.000 claims description 5
- 125000005010 perfluoroalkyl group Chemical group 0.000 claims description 5
- AFVFQIVMOAPDHO-UHFFFAOYSA-N Methanesulfonic acid Chemical compound CS(O)(=O)=O AFVFQIVMOAPDHO-UHFFFAOYSA-N 0.000 claims description 4
- QAOWNCQODCNURD-UHFFFAOYSA-N Sulfuric acid Chemical compound OS(O)(=O)=O QAOWNCQODCNURD-UHFFFAOYSA-N 0.000 claims description 4
- 238000009739 binding Methods 0.000 claims description 4
- WTEOIRVLGSZEPR-UHFFFAOYSA-N boron trifluoride Chemical compound FB(F)F WTEOIRVLGSZEPR-UHFFFAOYSA-N 0.000 claims description 4
- 229920005990 polystyrene resin Polymers 0.000 claims description 4
- 150000003457 sulfones Chemical class 0.000 claims description 4
- 102000003688 G-Protein-Coupled Receptors Human genes 0.000 claims description 3
- 108090000045 G-Protein-Coupled Receptors Proteins 0.000 claims description 3
- 239000004698 Polyethylene Substances 0.000 claims description 3
- 230000027455 binding Effects 0.000 claims description 3
- 229920000573 polyethylene Polymers 0.000 claims description 3
- 229920001451 polypropylene glycol Polymers 0.000 claims description 3
- ITMCEJHCFYSIIV-UHFFFAOYSA-N triflic acid Chemical compound OS(=O)(=O)C(F)(F)F ITMCEJHCFYSIIV-UHFFFAOYSA-N 0.000 claims description 3
- ZHGNHOOVYPHPNJ-UHFFFAOYSA-N Amigdalin Chemical compound FC(F)(F)C(=O)OCC1OC(OCC2OC(OC(C#N)C3=CC=CC=C3)C(OC(=O)C(F)(F)F)C(OC(=O)C(F)(F)F)C2OC(=O)C(F)(F)F)C(OC(=O)C(F)(F)F)C(OC(=O)C(F)(F)F)C1OC(=O)C(F)(F)F ZHGNHOOVYPHPNJ-UHFFFAOYSA-N 0.000 claims description 2
- CPELXLSAUQHCOX-UHFFFAOYSA-N Hydrogen bromide Chemical compound Br CPELXLSAUQHCOX-UHFFFAOYSA-N 0.000 claims description 2
- 229940098779 methanesulfonic acid Drugs 0.000 claims description 2
- GRJJQCWNZGRKAU-UHFFFAOYSA-N pyridin-1-ium;fluoride Chemical compound F.C1=CC=NC=C1 GRJJQCWNZGRKAU-UHFFFAOYSA-N 0.000 claims description 2
- 235000011149 sulphuric acid Nutrition 0.000 claims description 2
- 229940125532 enzyme inhibitor Drugs 0.000 claims 2
- 125000000325 methylidene group Chemical group [H]C([H])=* 0.000 claims 2
- 238000002360 preparation method Methods 0.000 abstract description 19
- 239000008177 pharmaceutical agent Substances 0.000 abstract description 7
- YMWUJEATGCHHMB-UHFFFAOYSA-N Dichloromethane Chemical compound ClCCl YMWUJEATGCHHMB-UHFFFAOYSA-N 0.000 description 42
- ZMXDDKWLCZADIW-UHFFFAOYSA-N N,N-Dimethylformamide Chemical compound CN(C)C=O ZMXDDKWLCZADIW-UHFFFAOYSA-N 0.000 description 37
- 238000003776 cleavage reaction Methods 0.000 description 32
- 230000007017 scission Effects 0.000 description 32
- 238000006243 chemical reaction Methods 0.000 description 24
- OKKJLVBELUTLKV-UHFFFAOYSA-N Methanol Chemical compound OC OKKJLVBELUTLKV-UHFFFAOYSA-N 0.000 description 21
- WYURNTSHIVDZCO-UHFFFAOYSA-N tetrahydrofuran Substances C1CCOC1 WYURNTSHIVDZCO-UHFFFAOYSA-N 0.000 description 21
- 239000000047 product Substances 0.000 description 20
- DTQVDTLACAAQTR-UHFFFAOYSA-N Trifluoroacetic acid Chemical compound OC(=O)C(F)(F)F DTQVDTLACAAQTR-UHFFFAOYSA-N 0.000 description 18
- 125000004432 carbon atom Chemical group C* 0.000 description 17
- 239000002253 acid Substances 0.000 description 14
- 239000003446 ligand Substances 0.000 description 13
- 125000001997 phenyl group Chemical group [H]C1=C([H])C([H])=C(*)C([H])=C1[H] 0.000 description 12
- 108090000765 processed proteins & peptides Proteins 0.000 description 12
- 150000001721 carbon Chemical group 0.000 description 11
- 239000000126 substance Substances 0.000 description 11
- RTZKZFJDLAIYFH-UHFFFAOYSA-N Diethyl ether Chemical compound CCOCC RTZKZFJDLAIYFH-UHFFFAOYSA-N 0.000 description 10
- 125000004356 hydroxy functional group Chemical group O* 0.000 description 9
- ISWSIDIOOBJBQZ-UHFFFAOYSA-N Phenol Chemical compound OC1=CC=CC=C1 ISWSIDIOOBJBQZ-UHFFFAOYSA-N 0.000 description 8
- 239000011324 bead Substances 0.000 description 8
- 238000001212 derivatisation Methods 0.000 description 7
- NUVBSKCKDOMJSU-UHFFFAOYSA-N ethylparaben Chemical compound CCOC(=O)C1=CC=C(O)C=C1 NUVBSKCKDOMJSU-UHFFFAOYSA-N 0.000 description 7
- 239000000243 solution Substances 0.000 description 7
- 150000003555 thioacetals Chemical class 0.000 description 7
- RYHBNJHYFVUHQT-UHFFFAOYSA-N 1,4-Dioxane Chemical compound C1COCCO1 RYHBNJHYFVUHQT-UHFFFAOYSA-N 0.000 description 6
- KWYUFKZDYYNOTN-UHFFFAOYSA-M Potassium hydroxide Chemical compound [OH-].[K+] KWYUFKZDYYNOTN-UHFFFAOYSA-M 0.000 description 6
- RWRDLPDLKQPQOW-UHFFFAOYSA-N Pyrrolidine Chemical compound C1CCNC1 RWRDLPDLKQPQOW-UHFFFAOYSA-N 0.000 description 6
- 150000001450 anions Chemical class 0.000 description 6
- 238000013459 approach Methods 0.000 description 6
- 239000003153 chemical reaction reagent Substances 0.000 description 6
- 150000004252 dithioacetals Chemical class 0.000 description 6
- 150000003254 radicals Chemical class 0.000 description 6
- 238000004809 thin layer chromatography Methods 0.000 description 6
- UMGDCJDMYOKAJW-UHFFFAOYSA-N thiourea Chemical compound NC(N)=S UMGDCJDMYOKAJW-UHFFFAOYSA-N 0.000 description 6
- BGJSXRVXTHVRSN-UHFFFAOYSA-N 1,3,5-trioxane Chemical compound C1OCOCO1 BGJSXRVXTHVRSN-UHFFFAOYSA-N 0.000 description 5
- 235000010228 ethyl p-hydroxybenzoate Nutrition 0.000 description 5
- 125000000524 functional group Chemical group 0.000 description 5
- IXCSERBJSXMMFS-UHFFFAOYSA-N hydrogen chloride Substances Cl.Cl IXCSERBJSXMMFS-UHFFFAOYSA-N 0.000 description 5
- 229910000041 hydrogen chloride Inorganic materials 0.000 description 5
- 125000001570 methylene group Chemical group [H]C([H])([*:1])[*:2] 0.000 description 5
- MYRTYDVEIRVNKP-UHFFFAOYSA-N 1,2-Divinylbenzene Chemical compound C=CC1=CC=CC=C1C=C MYRTYDVEIRVNKP-UHFFFAOYSA-N 0.000 description 4
- HEDRZPFGACZZDS-UHFFFAOYSA-N Chloroform Chemical compound ClC(Cl)Cl HEDRZPFGACZZDS-UHFFFAOYSA-N 0.000 description 4
- YNAVUWVOSKDBBP-UHFFFAOYSA-N Morpholine Chemical compound C1COCCN1 YNAVUWVOSKDBBP-UHFFFAOYSA-N 0.000 description 4
- JUJWROOIHBZHMG-UHFFFAOYSA-N Pyridine Chemical compound C1=CC=NC=C1 JUJWROOIHBZHMG-UHFFFAOYSA-N 0.000 description 4
- VYPSYNLAJGMNEJ-UHFFFAOYSA-N Silicium dioxide Chemical compound O=[Si]=O VYPSYNLAJGMNEJ-UHFFFAOYSA-N 0.000 description 4
- NINIDFKCEFEMDL-UHFFFAOYSA-N Sulfur Chemical group [S] NINIDFKCEFEMDL-UHFFFAOYSA-N 0.000 description 4
- YTPLMLYBLZKORZ-UHFFFAOYSA-N Thiophene Chemical compound C=1C=CSC=1 YTPLMLYBLZKORZ-UHFFFAOYSA-N 0.000 description 4
- 125000002777 acetyl group Chemical class [H]C([H])([H])C(*)=O 0.000 description 4
- 238000007792 addition Methods 0.000 description 4
- 150000002611 lead compounds Chemical class 0.000 description 4
- 230000004048 modification Effects 0.000 description 4
- 238000012986 modification Methods 0.000 description 4
- 230000000144 pharmacologic effect Effects 0.000 description 4
- 102000004196 processed proteins & peptides Human genes 0.000 description 4
- 229910000104 sodium hydride Inorganic materials 0.000 description 4
- 238000010532 solid phase synthesis reaction Methods 0.000 description 4
- DHBXNPKRAUYBTH-UHFFFAOYSA-N 1,1-ethanedithiol Chemical compound CC(S)S DHBXNPKRAUYBTH-UHFFFAOYSA-N 0.000 description 3
- ZAMOUSCENKQFHK-UHFFFAOYSA-N Chlorine atom Chemical compound [Cl] ZAMOUSCENKQFHK-UHFFFAOYSA-N 0.000 description 3
- WSFSSNUMVMOOMR-UHFFFAOYSA-N Formaldehyde Chemical compound O=C WSFSSNUMVMOOMR-UHFFFAOYSA-N 0.000 description 3
- 108010067902 Peptide Library Proteins 0.000 description 3
- YXFVVABEGXRONW-UHFFFAOYSA-N Toluene Chemical compound CC1=CC=CC=C1 YXFVVABEGXRONW-UHFFFAOYSA-N 0.000 description 3
- XSQUKJJJFZCRTK-UHFFFAOYSA-N Urea Natural products NC(N)=O XSQUKJJJFZCRTK-UHFFFAOYSA-N 0.000 description 3
- 230000002378 acidificating effect Effects 0.000 description 3
- 238000004458 analytical method Methods 0.000 description 3
- WPYMKLBDIGXBTP-UHFFFAOYSA-N benzoic acid Chemical compound OC(=O)C1=CC=CC=C1 WPYMKLBDIGXBTP-UHFFFAOYSA-N 0.000 description 3
- 239000000872 buffer Substances 0.000 description 3
- FJDQFPXHSGXQBY-UHFFFAOYSA-L caesium carbonate Chemical compound [Cs+].[Cs+].[O-]C([O-])=O FJDQFPXHSGXQBY-UHFFFAOYSA-L 0.000 description 3
- 150000002148 esters Chemical class 0.000 description 3
- 239000011521 glass Substances 0.000 description 3
- RAXXELZNTBOGNW-UHFFFAOYSA-N imidazole Natural products C1=CNC=N1 RAXXELZNTBOGNW-UHFFFAOYSA-N 0.000 description 3
- 238000011534 incubation Methods 0.000 description 3
- 125000002496 methyl group Chemical group [H]C([H])([H])* 0.000 description 3
- AYEQJLOHMLYKAV-UHFFFAOYSA-N n-(4-sulfanylphenyl)acetamide Chemical compound CC(=O)NC1=CC=C(S)C=C1 AYEQJLOHMLYKAV-UHFFFAOYSA-N 0.000 description 3
- QJGQUHMNIGDVPM-UHFFFAOYSA-N nitrogen group Chemical group [N] QJGQUHMNIGDVPM-UHFFFAOYSA-N 0.000 description 3
- 125000004430 oxygen atom Chemical group O* 0.000 description 3
- 239000002243 precursor Substances 0.000 description 3
- 238000000159 protein binding assay Methods 0.000 description 3
- 150000003839 salts Chemical class 0.000 description 3
- 239000002904 solvent Substances 0.000 description 3
- 239000000725 suspension Substances 0.000 description 3
- 150000003573 thiols Chemical class 0.000 description 3
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 3
- ZDDDFDQTSXYYSE-UHFFFAOYSA-N 1-ethylsulfanylpropane Chemical compound CCCSCC ZDDDFDQTSXYYSE-UHFFFAOYSA-N 0.000 description 2
- XEZNGIUYQVAUSS-UHFFFAOYSA-N 18-crown-6 Chemical compound C1COCCOCCOCCOCCOCCO1 XEZNGIUYQVAUSS-UHFFFAOYSA-N 0.000 description 2
- 229910015900 BF3 Inorganic materials 0.000 description 2
- ROSDSFDQCJNGOL-UHFFFAOYSA-N Dimethylamine Chemical compound CNC ROSDSFDQCJNGOL-UHFFFAOYSA-N 0.000 description 2
- IAZDPXIOMUYVGZ-UHFFFAOYSA-N Dimethylsulphoxide Chemical compound CS(C)=O IAZDPXIOMUYVGZ-UHFFFAOYSA-N 0.000 description 2
- KRHYYFGTRYWZRS-UHFFFAOYSA-N Fluorane Chemical compound F KRHYYFGTRYWZRS-UHFFFAOYSA-N 0.000 description 2
- TWRXJAOTZQYOKJ-UHFFFAOYSA-L Magnesium chloride Chemical compound [Mg+2].[Cl-].[Cl-] TWRXJAOTZQYOKJ-UHFFFAOYSA-L 0.000 description 2
- GLUUGHFHXGJENI-UHFFFAOYSA-N Piperazine Chemical compound C1CNCCN1 GLUUGHFHXGJENI-UHFFFAOYSA-N 0.000 description 2
- NQRYJNQNLNOLGT-UHFFFAOYSA-N Piperidine Chemical compound C1CCNCC1 NQRYJNQNLNOLGT-UHFFFAOYSA-N 0.000 description 2
- QQONPFPTGQHPMA-UHFFFAOYSA-N Propene Chemical group CC=C QQONPFPTGQHPMA-UHFFFAOYSA-N 0.000 description 2
- KAESVJOAVNADME-UHFFFAOYSA-N Pyrrole Chemical compound C=1C=CNC=1 KAESVJOAVNADME-UHFFFAOYSA-N 0.000 description 2
- SMWDFEZZVXVKRB-UHFFFAOYSA-N Quinoline Chemical compound N1=CC=CC2=CC=CC=C21 SMWDFEZZVXVKRB-UHFFFAOYSA-N 0.000 description 2
- DHKHKXVYLBGOIT-UHFFFAOYSA-N acetaldehyde Diethyl Acetal Natural products CCOC(C)OCC DHKHKXVYLBGOIT-UHFFFAOYSA-N 0.000 description 2
- 125000003545 alkoxy group Chemical group 0.000 description 2
- HSFWRNGVRCDJHI-UHFFFAOYSA-N alpha-acetylene Natural products C#C HSFWRNGVRCDJHI-UHFFFAOYSA-N 0.000 description 2
- 150000001408 amides Chemical group 0.000 description 2
- 239000005557 antagonist Substances 0.000 description 2
- 125000001797 benzyl group Chemical group [H]C1=C([H])C([H])=C(C([H])=C1[H])C([H])([H])* 0.000 description 2
- 238000004166 bioassay Methods 0.000 description 2
- 230000004071 biological effect Effects 0.000 description 2
- 229910000024 caesium carbonate Inorganic materials 0.000 description 2
- 239000007795 chemical reaction product Substances 0.000 description 2
- 230000008878 coupling Effects 0.000 description 2
- 238000010168 coupling process Methods 0.000 description 2
- 238000005859 coupling reaction Methods 0.000 description 2
- 238000006477 desulfuration reaction Methods 0.000 description 2
- 230000023556 desulfurization Effects 0.000 description 2
- 238000001035 drying Methods 0.000 description 2
- 125000001495 ethyl group Chemical group [H]C([H])([H])C([H])([H])* 0.000 description 2
- 239000004403 ethyl p-hydroxybenzoate Substances 0.000 description 2
- 229940043351 ethyl-p-hydroxybenzoate Drugs 0.000 description 2
- 125000002534 ethynyl group Chemical group [H]C#C* 0.000 description 2
- 229950007535 eticlopride Drugs 0.000 description 2
- 238000001704 evaporation Methods 0.000 description 2
- 230000008020 evaporation Effects 0.000 description 2
- 238000002825 functional assay Methods 0.000 description 2
- 230000007062 hydrolysis Effects 0.000 description 2
- 238000006460 hydrolysis reaction Methods 0.000 description 2
- AWJUIBRHMBBTKR-UHFFFAOYSA-N isoquinoline Chemical compound C1=NC=CC2=CC=CC=C21 AWJUIBRHMBBTKR-UHFFFAOYSA-N 0.000 description 2
- 238000004949 mass spectrometry Methods 0.000 description 2
- 239000000463 material Substances 0.000 description 2
- 238000006053 organic reaction Methods 0.000 description 2
- 239000008188 pellet Substances 0.000 description 2
- 230000008569 process Effects 0.000 description 2
- UMJSCPRVCHMLSP-UHFFFAOYSA-N pyridine Natural products COC1=CC=CN=C1 UMJSCPRVCHMLSP-UHFFFAOYSA-N 0.000 description 2
- 230000009467 reduction Effects 0.000 description 2
- 238000010992 reflux Methods 0.000 description 2
- 239000000741 silica gel Substances 0.000 description 2
- 229910002027 silica gel Inorganic materials 0.000 description 2
- 229910052709 silver Inorganic materials 0.000 description 2
- 239000004332 silver Substances 0.000 description 2
- 230000009870 specific binding Effects 0.000 description 2
- 239000012258 stirred mixture Substances 0.000 description 2
- HHVIBTZHLRERCL-UHFFFAOYSA-N sulfonyldimethane Chemical compound CS(C)(=O)=O HHVIBTZHLRERCL-UHFFFAOYSA-N 0.000 description 2
- 238000001308 synthesis method Methods 0.000 description 2
- 229930192474 thiophene Natural products 0.000 description 2
- ABDKAPXRBAPSQN-UHFFFAOYSA-N veratrole Chemical compound COC1=CC=CC=C1OC ABDKAPXRBAPSQN-UHFFFAOYSA-N 0.000 description 2
- 125000004973 1-butenyl group Chemical group C(=CCC)* 0.000 description 1
- ONQBOTKLCMXPOF-UHFFFAOYSA-N 1-ethylpyrrolidine Chemical compound CCN1CCCC1 ONQBOTKLCMXPOF-UHFFFAOYSA-N 0.000 description 1
- QIAZGMDOMXLGBB-UHFFFAOYSA-N 1-propan-2-ylsulfanylbutane Chemical compound CCCCSC(C)C QIAZGMDOMXLGBB-UHFFFAOYSA-N 0.000 description 1
- 125000006017 1-propenyl group Chemical group 0.000 description 1
- HYZJCKYKOHLVJF-UHFFFAOYSA-N 1H-benzimidazole Chemical compound C1=CC=C2NC=NC2=C1 HYZJCKYKOHLVJF-UHFFFAOYSA-N 0.000 description 1
- NGNBDVOYPDDBFK-UHFFFAOYSA-N 2-[2,4-di(pentan-2-yl)phenoxy]acetyl chloride Chemical compound CCCC(C)C1=CC=C(OCC(Cl)=O)C(C(C)CCC)=C1 NGNBDVOYPDDBFK-UHFFFAOYSA-N 0.000 description 1
- 125000004974 2-butenyl group Chemical group C(C=CC)* 0.000 description 1
- HBAHZZVIEFRTEY-UHFFFAOYSA-N 2-heptylcyclohex-2-en-1-one Chemical compound CCCCCCCC1=CCCCC1=O HBAHZZVIEFRTEY-UHFFFAOYSA-N 0.000 description 1
- 125000000094 2-phenylethyl group Chemical group [H]C1=C([H])C([H])=C(C([H])=C1[H])C([H])([H])C([H])([H])* 0.000 description 1
- 125000003903 2-propenyl group Chemical group [H]C([*])([H])C([H])=C([H])[H] 0.000 description 1
- BMYNFMYTOJXKLE-UHFFFAOYSA-N 3-azaniumyl-2-hydroxypropanoate Chemical compound NCC(O)C(O)=O BMYNFMYTOJXKLE-UHFFFAOYSA-N 0.000 description 1
- AADCDMQTJNYOSS-LBPRGKRZSA-N 5-chloro-3-ethyl-N-[[(2S)-1-ethyl-2-pyrrolidinyl]methyl]-2-hydroxy-6-methoxybenzamide Chemical compound CCN1CCC[C@H]1CNC(=O)C1=C(O)C(CC)=CC(Cl)=C1OC AADCDMQTJNYOSS-LBPRGKRZSA-N 0.000 description 1
- HFJFXXDHVWLIKX-UHFFFAOYSA-N 5-chloro-3-ethyl-n-[(1-ethylpyrrolidin-2-yl)methyl]-2-hydroxy-6-methoxybenzamide;hydrochloride Chemical compound Cl.CCN1CCCC1CNC(=O)C1=C(O)C(CC)=CC(Cl)=C1OC HFJFXXDHVWLIKX-UHFFFAOYSA-N 0.000 description 1
- 102000009346 Adenosine receptors Human genes 0.000 description 1
- 108050000203 Adenosine receptors Proteins 0.000 description 1
- 108060003345 Adrenergic Receptor Proteins 0.000 description 1
- 102000017910 Adrenergic receptor Human genes 0.000 description 1
- 102000008873 Angiotensin II receptor Human genes 0.000 description 1
- 108050000824 Angiotensin II receptor Proteins 0.000 description 1
- 239000005711 Benzoic acid Substances 0.000 description 1
- 108010001789 Calcitonin Receptors Proteins 0.000 description 1
- 102100038520 Calcitonin receptor Human genes 0.000 description 1
- 241000766026 Coregonus nasus Species 0.000 description 1
- 102000015554 Dopamine receptor Human genes 0.000 description 1
- 108050004812 Dopamine receptor Proteins 0.000 description 1
- KCXVZYZYPLLWCC-UHFFFAOYSA-N EDTA Chemical compound OC(=O)CN(CC(O)=O)CCN(CC(O)=O)CC(O)=O KCXVZYZYPLLWCC-UHFFFAOYSA-N 0.000 description 1
- 102000010180 Endothelin receptor Human genes 0.000 description 1
- 108050001739 Endothelin receptor Proteins 0.000 description 1
- 102000004190 Enzymes Human genes 0.000 description 1
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- 238000005033 Fourier transform infrared spectroscopy Methods 0.000 description 1
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- 239000004952 Polyamide Substances 0.000 description 1
- CZPWVGJYEJSRLH-UHFFFAOYSA-N Pyrimidine Chemical compound C1=CN=CN=C1 CZPWVGJYEJSRLH-UHFFFAOYSA-N 0.000 description 1
- KEAYESYHFKHZAL-UHFFFAOYSA-N Sodium Chemical compound [Na] KEAYESYHFKHZAL-UHFFFAOYSA-N 0.000 description 1
- UCKMPCXJQFINFW-UHFFFAOYSA-N Sulphide Chemical compound [S-2] UCKMPCXJQFINFW-UHFFFAOYSA-N 0.000 description 1
- FZWLAAWBMGSTSO-UHFFFAOYSA-N Thiazole Chemical compound C1=CSC=N1 FZWLAAWBMGSTSO-UHFFFAOYSA-N 0.000 description 1
- 239000007983 Tris buffer Substances 0.000 description 1
- JVWLOLRJWFXRLM-UHFFFAOYSA-N [C].[Cs] Chemical compound [C].[Cs] JVWLOLRJWFXRLM-UHFFFAOYSA-N 0.000 description 1
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- 125000001246 bromo group Chemical group Br* 0.000 description 1
- 229910052792 caesium Inorganic materials 0.000 description 1
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- 125000004218 chloromethyl group Chemical group [H]C([H])(Cl)* 0.000 description 1
- 238000007796 conventional method Methods 0.000 description 1
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- 229920001577 copolymer Polymers 0.000 description 1
- 150000003950 cyclic amides Chemical class 0.000 description 1
- 125000000113 cyclohexyl group Chemical group [H]C1([H])C([H])([H])C([H])([H])C([H])(*)C([H])([H])C1([H])[H] 0.000 description 1
- 125000001511 cyclopentyl group Chemical group [H]C1([H])C([H])([H])C([H])([H])C([H])(*)C1([H])[H] 0.000 description 1
- 125000001559 cyclopropyl group Chemical group [H]C1([H])C([H])([H])C1([H])* 0.000 description 1
- 230000003247 decreasing effect Effects 0.000 description 1
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- ZHUXMBYIONRQQX-UHFFFAOYSA-N hydroxidodioxidocarbon(.) Chemical compound [O]C(O)=O ZHUXMBYIONRQQX-UHFFFAOYSA-N 0.000 description 1
- 108010038415 interleukin-8 receptors Proteins 0.000 description 1
- 102000010681 interleukin-8 receptors Human genes 0.000 description 1
- 125000000959 isobutyl group Chemical group [H]C([H])([H])C([H])(C([H])([H])[H])C([H])([H])* 0.000 description 1
- 125000001449 isopropyl group Chemical group [H]C([H])([H])C([H])(*)C([H])([H])[H] 0.000 description 1
- 239000004816 latex Substances 0.000 description 1
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- 229910001629 magnesium chloride Inorganic materials 0.000 description 1
- 239000012528 membrane Substances 0.000 description 1
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- 108020004084 membrane receptors Proteins 0.000 description 1
- 150000002730 mercury Chemical class 0.000 description 1
- QSHDDOUJBYECFT-UHFFFAOYSA-N mercury Chemical compound [Hg] QSHDDOUJBYECFT-UHFFFAOYSA-N 0.000 description 1
- 229910052753 mercury Inorganic materials 0.000 description 1
- 229910021645 metal ion Inorganic materials 0.000 description 1
- 238000006263 metalation reaction Methods 0.000 description 1
- MYWUZJCMWCOHBA-VIFPVBQESA-N methamphetamine Chemical compound CN[C@@H](C)CC1=CC=CC=C1 MYWUZJCMWCOHBA-VIFPVBQESA-N 0.000 description 1
- CSJDCSCTVDEHRN-UHFFFAOYSA-N methane;molecular oxygen Chemical compound C.O=O CSJDCSCTVDEHRN-UHFFFAOYSA-N 0.000 description 1
- YQCIWBXEVYWRCW-UHFFFAOYSA-N methane;sulfane Chemical compound C.S YQCIWBXEVYWRCW-UHFFFAOYSA-N 0.000 description 1
- 125000004108 n-butyl group Chemical group [H]C([H])([H])C([H])([H])C([H])([H])C([H])([H])* 0.000 description 1
- GNVRJGIVDSQCOP-UHFFFAOYSA-N n-ethyl-n-methylethanamine Chemical compound CCN(C)CC GNVRJGIVDSQCOP-UHFFFAOYSA-N 0.000 description 1
- 125000004123 n-propyl group Chemical group [H]C([H])([H])C([H])([H])C([H])([H])* 0.000 description 1
- 125000001624 naphthyl group Chemical group 0.000 description 1
- 238000006396 nitration reaction Methods 0.000 description 1
- 125000004433 nitrogen atom Chemical group N* 0.000 description 1
- 230000000269 nucleophilic effect Effects 0.000 description 1
- 150000002894 organic compounds Chemical class 0.000 description 1
- XSXHWVKGUXMUQE-UHFFFAOYSA-N osmium dioxide Inorganic materials O=[Os]=O XSXHWVKGUXMUQE-UHFFFAOYSA-N 0.000 description 1
- 239000007800 oxidant agent Substances 0.000 description 1
- 230000003647 oxidation Effects 0.000 description 1
- 238000007254 oxidation reaction Methods 0.000 description 1
- 108010011903 peptide receptors Proteins 0.000 description 1
- 102000014187 peptide receptors Human genes 0.000 description 1
- 238000010647 peptide synthesis reaction Methods 0.000 description 1
- 229920001568 phenolic resin Polymers 0.000 description 1
- 239000005011 phenolic resin Substances 0.000 description 1
- LMRCKXYHPYNEJV-UHFFFAOYSA-N piperazine;piperidine Chemical compound C1CCNCC1.C1CNCCN1 LMRCKXYHPYNEJV-UHFFFAOYSA-N 0.000 description 1
- 229920002401 polyacrylamide Polymers 0.000 description 1
- 229920002647 polyamide Polymers 0.000 description 1
- 229920001282 polysaccharide Polymers 0.000 description 1
- 239000005017 polysaccharide Substances 0.000 description 1
- 230000002035 prolonged effect Effects 0.000 description 1
- 125000006239 protecting group Chemical group 0.000 description 1
- 102000004169 proteins and genes Human genes 0.000 description 1
- 108090000623 proteins and genes Proteins 0.000 description 1
- USPWKWBDZOARPV-UHFFFAOYSA-N pyrazolidine Chemical compound C1CNNC1 USPWKWBDZOARPV-UHFFFAOYSA-N 0.000 description 1
- 125000004076 pyridyl group Chemical group 0.000 description 1
- 239000000700 radioactive tracer Substances 0.000 description 1
- 239000011541 reaction mixture Substances 0.000 description 1
- 238000001525 receptor binding assay Methods 0.000 description 1
- 125000002914 sec-butyl group Chemical group [H]C([H])([H])C([H])([H])C([H])(*)C([H])([H])[H] 0.000 description 1
- 238000007086 side reaction Methods 0.000 description 1
- 230000007727 signaling mechanism Effects 0.000 description 1
- 239000000377 silicon dioxide Substances 0.000 description 1
- 239000012312 sodium hydride Substances 0.000 description 1
- 239000007790 solid phase Substances 0.000 description 1
- 241000894007 species Species 0.000 description 1
- 238000010561 standard procedure Methods 0.000 description 1
- 238000003756 stirring Methods 0.000 description 1
- 239000000758 substrate Substances 0.000 description 1
- 150000003456 sulfonamides Chemical class 0.000 description 1
- 238000006277 sulfonation reaction Methods 0.000 description 1
- 125000004434 sulfur atom Chemical group 0.000 description 1
- 239000006228 supernatant Substances 0.000 description 1
- 230000002194 synthesizing effect Effects 0.000 description 1
- 238000010189 synthetic method Methods 0.000 description 1
- 125000000999 tert-butyl group Chemical group [H]C([H])([H])C(*)(C([H])([H])[H])C([H])([H])[H] 0.000 description 1
- 125000000391 vinyl group Chemical group [H]C([*])=C([H])[H] 0.000 description 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C08—ORGANIC MACROMOLECULAR COMPOUNDS; THEIR PREPARATION OR CHEMICAL WORKING-UP; COMPOSITIONS BASED THEREON
- C08F—MACROMOLECULAR COMPOUNDS OBTAINED BY REACTIONS ONLY INVOLVING CARBON-TO-CARBON UNSATURATED BONDS
- C08F8/00—Chemical modification by after-treatment
- C08F8/34—Introducing sulfur atoms or sulfur-containing groups
-
- C—CHEMISTRY; METALLURGY
- C08—ORGANIC MACROMOLECULAR COMPOUNDS; THEIR PREPARATION OR CHEMICAL WORKING-UP; COMPOSITIONS BASED THEREON
- C08F—MACROMOLECULAR COMPOUNDS OBTAINED BY REACTIONS ONLY INVOLVING CARBON-TO-CARBON UNSATURATED BONDS
- C08F8/00—Chemical modification by after-treatment
- C08F8/30—Introducing nitrogen atoms or nitrogen-containing groups
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01J—CHEMICAL OR PHYSICAL PROCESSES, e.g. CATALYSIS OR COLLOID CHEMISTRY; THEIR RELEVANT APPARATUS
- B01J2219/00—Chemical, physical or physico-chemical processes in general; Their relevant apparatus
- B01J2219/00274—Sequential or parallel reactions; Apparatus and devices for combinatorial chemistry or for making arrays; Chemical library technology
- B01J2219/00277—Apparatus
- B01J2219/00497—Features relating to the solid phase supports
Definitions
- This invention relates to novel polymer resins, methods for their preparation and their use in the synthesis of libraries of compounds to be screened as pharmaceutical agents.
- the standard method for conducting a search is to screen a variety of chemical moieties, for example, naturally occurring compounds, specifically synthesized compounds or compounds which exist in synthetic libraries or data banks.
- the biological activity of the chemical moieties is determined by employing the moieties in a suitable assay which has been designed to test for a particular property of the chemical moiety being screened, for example, a receptor binding assay which tests the ability of the moiety to bind to a particular receptor site or to exhibit activity at an enzyme.
- the instant novel polymer resins are useful in the preparation of either a single compound or a library of molecularly diverse compounds.
- the present resins are useful in preparing compounds through resin-bound synthesis, wherein (i) a resin-bound compound intermediate is formed by coupling the instant novel resin with a compound having at least one heteroatom, (ii) the compound portion of the resin-bound compound intermediate is derivatized and (iii) the resin-bound compound intermediate subjected to mild cleavage conditions so that the derivatized compound thus cleaved can have a -COOH, cyclic or acyclic amide, cyclic or acyclic sulfonamide, hydroxy, -NH or -SH group at the position of cleavage from the resin-bound compound intermediate.
- the instant resins and linker moieties allow for efficient preparation and derivatization of compounds to be screened for pharmacological activity.
- the compounds or libraries of compounds prepared according to this invention may be screened for activity as ligands (either as an agonist or as an antagonist of the receptor) of various receptor sites, including, but not Umited to, G-protei coupled receptor sites, and as enzyme inhibitors, in suitable assays for determining such activity.
- the methods disclosed herein may be applied to obtain libraries of compounds that are enzyme inhibitors, receptor ligands or channel blockers.
- This invention relates to novel polymer resins, methods for preparing said resins an intermediates used in the preparation of said resins.
- the resin comprises the structure of formula (I):
- X is O, S, or N-R, wherein R is hydrogen, alkyl, aryl or arylalkyl; P is a polymer support; Z is a bond, optionally substituted aryl or optionally substituted heteroaryl, wherein the optional substituents are alkyl, aryl, nitro, halogen or methoxy, or Z is -COO wherein R' is (C2 to C20) alkyl optionally having one or more intervening aryl groups; W i a leaving group that is readily displaceable by an oxygen, nitrogen or sulfur anion, including, but not limited to, chlorine, bromine, iodine, -OSO2R", wherein R" is alkyl, optionally substituted aryl, or perfluoroalkyl; R 1 , R 2 , R 3 and R 4 are, independently from one another, hydrogen, (C to C 4 ) alkyl, (C 3 to C 10 ) cyclic alkyl or optionally substituted aryl
- One aspect of this invention relates to a novel linker of formula (IA) , '-Z-(CR 1 R 2 ) n -X-(C*R 3 R 4 W)", wherein moieties W, X, Z, R 1 , R 2 , R3, R4, an d n ⁇ defined as described above.
- the novel resin of this invention is the entire compound of formula (I) which comprises the polymer support P, bound to the linker of formula (IA), as defined above.
- Another aspect of this invention relates to methods for utilizing solid-phase chemistry to make a compound of formula (II).
- a resin-bound compound intermediate is formed by coupling the resin of formula (I) with a compound to be derivatized. Additional synthetic chemistry is performed on the compound portion of the resin-bound compound intermediate, after which a derivatized resin-bound compound intermediate is formed and subjected to cleavage, which cleavage product is the derivatized compound of formula (II).
- the resin of formul (I) comprises the following structure:
- A is A ] , A2, A3, A4, A5, A6, A7, or Ag;
- a j is -OR 5 , wherein R 5 is optionally substituted alkyl, optionally substituted cycloalkyl, optionally substituted alkenyl, optionally substituted alkynyl, optionally substituted carbonyl, optionally substituted aryl, optionally substituted heteroaryl, optionally substituted arylalkyl, optionally substituted heteroarylalkyl, optionally substitute heterocyclic, optionally substituted heteroalkyl, optionally substituted heterocyclicalkyl, or optionally substituted alkylheteroalkyl;
- a 2 is -NR 6 R 7 , wherein R 6 and R 7 are the same or different and are hydrogen, optionally substituted alkyl, optionally substituted cycloalkyl, optionally substituted alkenyl optionally substituted alkynyl, optionally substituted aryl, optionally substituted heteroaryl, optionally substituted arylalkyl, optionally substituted heteroarylalkyl, optionally substitute heterocyclic, optionally substitute
- A3 is -SR 8 , wherein R 8 is optionally substituted alkyl, optionally substituted alkenyl optionally substituted cycloalkyl, optionally substituted alkynyl, optionally substituted aryl, optionally substituted heteroaryl, optionally substituted arylalkyl, optionally substituted heteroarylalkyl, optionally substituted heterocyclic, optionally substituted heteroalkyl, optionally substituted heterocyclicalkyl, or optionally substituted alkylheteroalkyl;
- A4 is R 9 -COO", wherein R 9 is optionally substituted alkyl, optionally substituted alkenyl, optionally substituted cycloalkyl, optionally substituted alkynyl, optionally substituted aryl, optionally substituted heteroaryl, optionally substituted arylalkyl, optionally substituted heteroarylalkyl, optionally substituted heterocyclic, optionally substituted heteroalkyl, optionally substituted heterocyclicalkyl, or optionally substituted alkylheteroalkyl;
- A5 is -NR 10 -C(O)R 11 , wherein R 10 and R 11 are the same or different and are optionally substituted alkyl, optionally substituted cycloalkyl, optionally substituted alkenyl optionally substituted alkynyl, optionally substituted aryl, optionally substituted heteroaryl, optionally substituted arylalkyl, optionally substituted heteroarylalkyl, optionally substitute heterocyclic, optionally substituted heteroal
- Ag is -NR 12 -SO2R 13 , wherein R 12 and R 13 are the same or different and are optionally substituted alkyl, optionally substituted cycloalkyl, optionally substituted alkenyl optionally substituted alkynyl, optionally substituted aryl, optionally substituted heteroaryl, optionally substituted arylalkyl, optionally substituted heteroarylalkyl, optionally substitute heterocyclic, optionally substituted heteroalkyl, optionally substituted heterocyclicalkyl, or optionally substituted alkylheteroalkyl; or wherein R 12 and R 13 , together with the nitrogen and sulfone to which they are bound, form an optionally substituted, saturated or unsaturated, 4-, 5-, 6- or 7-membered ring;
- a 7 is -O-(CH 2 ) m -C(O)R 14 , wherein m is an integer from 0 to 10; and R 14 is hydrogen, hydroxyl, optionally substituted alkyl, optionally substituted cycloalkyl, optionally substituted alkenyl, optionally substituted alkynyl, optionally substituted aryl, optionally substituted heteroaryl, optionally substituted arylalkyl, optionally substituted heteroarylalkyl, optionally substituted heterocyclic, optionally substituted heteroalkyl, optionally substituted heterocyclicalkyl, or optionally substituted alkylheteroalkyl; or wherein when m is an integer from 1 to 10, R 14 may form an optionally substituted, saturated or unsaturated, 4-, 5-, 6- or 7-membered ring together with one of the methylene carbons; and
- a 8 is -O-(CH 2 ) r -A'-C(0)R 15 , wherein r is an integer from 0 to 10; A' is O, N, or S; and R 15 is hydrogen, hydroxyl, optionally substituted alkyl, optionally substituted cycloalkyl, optionally substituted alkenyl, optionally substituted alkynyl, optionally substituted aryl, optionally substituted heteroaryl, optionally substituted arylalkyl, optionally substituted heteroarylalkyl, optionally substituted heterocyclic, optionally substituted heteroalkyl, optionally substituted heterocyclicalkyl, or optionally substituted alkylheteroalkyl, optionally substituted heterocyclicalkyl, or optionally substituted alkylheteroalkyl; or R 15 may form an optionally substituted, saturated or unsaturated, 4-, 5-, 6- or 7-membered ring together with one of the methylene carbons; provided that when A' is O or S, r
- Yet another aspect of this invention relates to methods for preparing resin-bound compounds of formula (II). Still another aspect is this invention relates to methods for utilizing novel polymer resin intermediates for preparing the compounds of this invention. Yet further, this invention relates to methods for preparing a library of molecularly diverse compounds of formula (II), wherein said methods utilize the polymer resins of this invention in combinatorial synthesis methods. Still further, this invention relates to methods for screening the compounds synthesized by the methods of this invention as pharmaceutical agents.
- reaction-bound synthesis and “solid phase synthesis” are used herein interchangeably to mean one or a series of chemical reactions used to prepare either a single compound of formula (II) or a library of molecularly diverse compounds of formula (II), wherein the chemical reactions are performed on a compound to be derivatized, which compound is bound to a polymer support through a novel linkage, in particular, a linkage moiety comprised of any combination of any two of N, O or S heteroatoms which are separated by a carbon atom, wherein any one of the N, O or S heteroatoms is part of the compound to be derivatized.
- the heteroatoms are separated by a methylene group.
- compound intermediate or "resin-bound compound intermediate” are used herein at all occurrences to mean an intermediate formed by the displacement of leaving group W of formula (I) with a compound to be derivatized comprising at least one heteroatom, which heteroatom is bound directly to a carbon atom (C*) to form a carbon atom-heteroatom bond, wherein this carbon is directly bound to a second heteroatom (variable X), which second heteroatom joins the carbon atom (C*), through a moiety -Z-CCR ⁇ 2 ) ⁇ , to a polymer backbone, P.
- the leaving group W is being displaced by an oxygen, nitrogen or sulfur heteroatom of the compound to be derivatized thus forming the carbon atom-heteroatom bond/linkage.
- the carbon atom C* is depicted as such in order to indicate the position of attachment of the compound to be derivatized to the resin, thus forming the resin-bound compound intermediate.
- the carbon atom C* may or may not be a chir al center.
- polymeric resin polymer support or polymer backbone
- polymer backbone polymer backbone
- the terms may include a bead or other solid support such as pellets, disks, capillaries, hollow fibers, needles, solid fibers, pins, cellulose beads, pore-glass beads, silica gels, or latex beads, made of, for example, a crosslinked polystyrene resin, a polyethylene glycol-polystyrene based resin, a polypropylene glycol based resin, polyamide, polysulfamide, phenolic resins, polysaccharides and any other substance which may be used as such and which would be known or obvious to one of ordinary skill in the art.
- a crosslinked polystyrene resin such as pellets, disks, capillaries, hollow fibers, needles, solid fibers, pins, cellulose beads, pore-glass beads, silica gels, or latex beads, made of, for example, a crosslinked polystyrene resin, a polyethylene glycol-polystyrene based resin, a polyprop
- Preferred polymeric resins for use herein are cross-linked polystyrene based resins, polyethylene glycol-polystyrene based resins and polypropylene glycol based resins.
- the desired compound (or library of compounds) is synthesized as part of a resin-bound compound intermediate, it may then be cleaved from the resin- bound compound intermediate (hereinafter referred to as a "soluble compound” or a "soluble library”).
- the compounds made by the instant methods may also remain bound as a resin-bound compound intermediate which is used to perform the resin-bound synthesis (hereinafter referred to as "resin-bound compounds” or "resin-bound libraries").
- additional synthetic chemistry is used herein at all occurrences to mean chemical reactions which are performed on the resin-bound compound intermediate in order to derivatize the compound portion of the intermediate.
- the additional synthetic chemistry is performed after attachment of the compound to be derivatized to the resin of formula (I), and prior to cleavage of the derivatized compound from the polymeric resin. It will be understood that said chemical reactions are compatible with and non-reactive with the resin-bound compound intermediate and may be used to derivatize the compound bound to the resin in order to produce compounds of formula (II) which are the final products after cleavage of the resin-bound compound intermediate.
- acetals, hemithioacetals, dithioacetals and aminoacetals may be used for preparing resin-bound compound intermediates from a resin of formula (I) and for cleaving the resin-bound compound intermediates in order to produce compounds of formula (II).
- Suitable methods of cleaving the resin-bound organic compounds disclose herein from the linkage to the resin may be found in Protective Groups in Organic Svnthesis.2nd Edition, T. Greene and P.G.M. Wuts, pp. 17-24; 47-55; 149-150; 156-158; 279-282; 393-394; 413-416; 437-440; and 449-452 (1991).
- assay is used herein at all occurrences to mean a binding assay or a functional assay known or obvious to one of ordinary skill in the art, including, but not limited to, the assays disclosed herein.
- a particularly suitable assay for use according to this invention is disclosed by Lerner et al., Pro c. Natl. Acad. Sci. U.SA., 91(5), pp. 1614- 1618 (1994).
- alkyl is used herein at all occurrences to mean a straight or branched chain radical of 1 to 20 carbon atoms, unless the length is limited thereto, including, but not limited to methyl, ethyl, n-propyl, isopropyl, n-butyl, sec-butyl, isobutyl, tert-butyl, and the like.
- the alkyl chain is 1 to 10 carbon atoms in length; more preferably, 1 to 8 carbon atoms in length.
- cycloalkyl and cyclic alkyl are used herein at all occurrences to mean cyclic radicals, preferably comprising 3 to 10 carbon atoms which may be mono- or bicyclo- fused ring systems which may additionally include unsaturation, including, but not limited to, cyclopropyl, cyclopentyl, cyclohexyl, 1,2,3,4-tetrahydronaphthyl, and the like.
- alkenyl is used herein at all occurrences to mean a straight or branched chain radical of 2 to 20 carbon atoms, unless the length is limited thereto, wherein there is at least one double bond between two of the carbon atoms in the chain, including, but not limited to, ethenyl, 1-propenyl, 2-propenyl, 2-methyl-l-propenyl, 1-butenyl, 2-butenyl, and the like.
- the alkenyl chain is 2 to 10 carbon atoms in length; more preferably, 2 to 8 carbon atoms in length.
- alkynyl is used herein at all occurrences to mean a straight or branched chain radical of 2 to 20 carbon atoms, unless the chain length is limited thereto, wherein there is at least one triple bond between two of the carbon atoms in the chain, including, but not limited to, acetylene, 1- propylene, 2-propylene, and the like.
- the alkynyl chain is 2 to 10 carbon atoms in length; more preferably, 2 to 8 carbon atoms in length.
- the unsaturated linkage i.e., the vinylene or acetylene linkage is preferably not directly attached to the nitrogen, oxygen or sulfur moieties.
- alkoxy is used herein at all occurrences to mean a straight or branched chain radical of 1 to 20 carbon atoms, unless the chain length is limited thereto, bonded to an oxygen atom, including, but not limited to, methoxy, ethoxy, n- propoxy, isopropoxy, and the like.
- the alkyl chain of the alkoxy moiety is 1 to 10 carbon atoms in length; more preferably 1 to 8 carbon atoms in length.
- aryl is used herein at all occurrences to mean 5-14-membered substituted or unsubstituted aromatic ring(s) or ring systems which may include bi- or tri- cyclic systems, including, but not limited to phenyl, naphthyl, and the like.
- heteroatom is used herein at all occurrences to mean an oxygen atom, a sulfiir atom or a nitrogen atom. It will be recognized that when the heteroatom is nitrogen, it may form an NR a R ⁇ moiety, wherein R a and R 0 are, independently, hydrogen or C j to Cg alkyl, or together with the nitrogen to which they are bound, form a saturated or unsaturated 5-, 6- or 7-membered ring, including, but not limited to, pyrrolidine, piperidine piperazine, morpholine, pyridine, and the like. It will be recognized that the saturated or unsaturated 5-, 6- or 7-membered ring may optionally have one or more additional heteroatoms in the ring.
- heteroaryl is used herein at all occurrences to mean 5-14-membered substituted or unsubstituted aromatic ring(s) or ring systems which may include bi- or tri- cyclic systems in which one or more of the rings comprise one or more heteroatoms.
- Representative examples include, but are not limited to, pyrrole, thiophene, pyridine, pyrimidine, oxazole, quinoline, thiazole, isoquinoline, imidazole, benzimidazole, furanyl, and the like.
- heterocyclic is used herein at all occurrences to mean a saturated or wholly or partially unsaturated 4-10 membered ring system in which one or more rings contain one or more heteroatoms, including, but not limited to, pyrrolidine, piperidine, piperazine, morpholine, imidazolidine, pyrazolidine, benzodiazepines, and the like.
- arylalkyl preferably Ci to C10; more preferably Ci to Cg alkyl moiet as defined above, for example, benzyl or phenethyl, and the like.
- heteroalkyl is used herein at all occurrences to mean a straight or branched chain radical of 1 to 20 carbon atoms (preferably Ci to C 1 0; more preferably Ci to Cg), unless the chain is limited thereto, wherein the chain comprises one or more heteroatoms.
- Representative examples include, but are not limited to, Ai is OR 5 , wherein R 5 is heteroalkyl, and may be represented by the formula -CH2-S-CH2-NH2.
- heteroatom of the heteroalkyl moiety when the heteroatom of the heteroalkyl moiety is oxygen or sulfur, it is not directly attached to the oxygen atom of Ai, A7 or Ag; or when the heteroatom of the heteroalkyl moiety is oxygen, it is not directly attached to the sulfur atom of A3.
- alkylheteroalkyl is used herein at all occurrences to mean a straight or branched chain radical of 1 to 20 carbon atoms (preferably Ci to C10; more preferably Q to Cg), unless the length is limited thereto, wherein the chain comprises one or more heteroatoms.
- Representative examples include, but are not limited to, methylethyl ether, ethyl propyl sulfide, isopropylthiobutane, dimethyl amine, diethylmethylamine, dimethyl sulfone, dimethyl sulfoxide, and the like.
- halogen is used herein at all occurrences to mean chloro, fluoro, iodo and bromo.
- cyclic amide is used herein at all occurrences to mean that the nitrogen and the carbonyl of an amide moiety, together with the R groups to which they are attached, form a saturated or unsaturated 4-, 5-, 6- or 7-membered ring. It will be recognized that the saturated or unsaturated 4-, 5-, 6- or 7-membered ring may optionally have one or more additional heteroatoms in the ring.
- cyclic sulfonamide is used herein at all occurrences to mean that the nitrogen and the sulfone of a sulfonamide, together with the R groups to which they are attached, form a saturated or unsaturated 4-, 5-, 6- or 7-membered ring. It will be recognized that the saturated or unsaturated 4-, 5-, 6- or 7-membered ring may optionally have one or more additional heteroatoms in the ring.
- R' is hydrogen, (Cj - C 6 ) alkyl, aryl, arylalkyl, heteroaryl, heteroarylalkyl, heterocyclic, heterocyclicalkyl, including, but not limited to, phenyl, benzyl, pyridyl, and the like.
- R' is hydrogen, (Cj - C 6 ) alkyl, aryl, arylalkyl, heteroaryl, heteroarylalkyl, heterocyclic, heterocyclicalkyl, including, but not limited to, phenyl, benzyl, pyridyl, and the like.
- R 8 , R 9 , R 10 , R 11 , R 12 , R 13 , R 14 or R 15 is alkyl, aryl, cycloalkyl, arylalkyl, alkylheteroalkyl, heteroarylalkyl, -OR'", -SR'", -N(R"') 2 , -NHC(O)R"', SO 2 N(R"')2. -C0 2 R"' or -CON(R"') 2 .
- alkyl, aryl, cycloalkyl, arylalkyl, alkylheteroalkyl, heteroarylalkyl moiety or the moiety R'" may be optionally substituted with one to five various optionally substituted functional groups including alkyl, alkenyl, aryl, cycloalkyl, heteroaryl, arylalkyl, heteroarylalkyl, heterocyclic or heterocyclicalkyl.
- combinatorial library or "library of molecularly diverse compounds” are used herein at all occurrences to mean a collection of diverse compounds of formula (II) which have been synthesized simultaneously starting from a core compound structure.
- the library contains a discrete number of independently variable substituents, functional groups or structural elements. Further, the library is designed so that, for the range of chemical moieties selected for each of the independently variable substituents, compounds containing all possible permutations of those substituents may be present in the library.
- a compound to be derivatized into a compound of formula (II) contains three independently variable substituents, labeled X, Y and Z, and if X is taken from m different chemical moieties, Y from n different chemical moieties and Z from p different chemical moieties (wherein m, n and/? are integers which define the size of the library, and which range between 1 and 100,000; between 1 and 10,000; between 1 and 1,000; between 1 and 100; and between 1 and 50), then the library may contain m x n x p different chemical compounds and all possible combinations of X, Y and Z could be present on the compounds within that library.
- the methods for preparing combinatorial libraries of compounds are such that the molecularly diverse compound members of the libraries are synthesized simultaneously.
- G-protein coupled receptor(s) is used herein at all occurrences to mean a membrane receptor using G-proteins as part of their signaling mechanism, including, but not limited to muscarinic acetylcholine receptors, adenosine receptors, adrenergic receptors, IL-8R receptors, dopamine receptors, endothelin receptors, histamine receptors, calcitonin receptors, angiotensin receptors and the like.
- optionally substituted compounds of formula (II) can be prepared by resin-bound synthesis, wherein said compound, after cleavage from a novel polymeric resin-bound compound intermediate, has a -COOH, cyclic or acyclic amide, cyclic or acyclic sulfonamide, hydroxy, -NH or -SH group on the carbon where it was bound to the resin.
- the compound of formula (II) is as follows:
- Aj is -OR 5 , wherein R 5 is optionally substituted alkyl, optionally substituted cycloalkyl, optionally substituted alkenyl, optionally substituted alkynyl, optionally substituted carbonyl, optionally substituted aryl, optionally substituted heteroaryl, optionally substituted arylalkyl, optionally substituted heteroarylalkyl, optionally substituted heterocyclic, optionally substituted heteroalkyl, optionally substituted heterocyclicalkyl, or optionally substituted alkylheteroalkyl.
- a preferred embodiment of this invention comprises a compound of formula (II), wherein A is Ai, i.e., -OR 5 , wherein R 5 is optionally substituted aryl, and one of the optional substituents is CON(R'")2 wherein at least one of the R'" moieties attached to the amide nitrogen is optionally substituted heterocyclicalkyl, including, but not limited to, N-ethyl pyrrolidine.
- Another preferred embodiment of this invention comprises a compound of formula (II), wherein A is Ai, i.e., -OR 5 , wherein R 5 is optionally substituted cycloalkyl, preferably optionally substituted 1,2,3,4 -tetrahydronaphthyl, wherein one the optional substituents on the cycloalkyl ring is - N(R'")2 and wherein R"', independently, is C ⁇ to Cg alkyl and optionally substituted C j to Cg alkyl, wherein the optional substituent on the alkyl moiety is aryl, preferably phenyl.
- A2 is -NR 6 R 7 , wherein R 6 and R 7 are the same or different and are hydrogen, optionally substituted alkyl, optionally substituted cycloalkyl, optionally substituted alkenyl, optionally substituted alkynyl, optionally substituted aryl, optionally substituted heteroaryl, optionally substituted arylalkyl, optionally substituted heteroarylalkyl, optionally substitute heterocyclic, optionally substituted heteroalkyl, optionally substituted heterocyclicalkyl, or optionally substituted alkylheteroalkyl, provided that R 6 and R 7 cannot both be hydrogen; or wherein R 6 and R 7 , together with the nitrogen to which they are bound, form an optionally substituted, saturated or unsaturated, 4-, 5-, 6- or 7-membered ring.
- A3 is -SR 8 , wherein R 8 is optionally substituted alkyl, optionally substituted alkenyl optionally substituted cycloalkyl, optionally substituted alkynyl, optionally substituted aryl, optionally substituted heteroaryl, optionally substituted arylalkyl, optionally substituted heteroarylalkyl, optionally substituted heterocyclic, optionally substituted heteroalkyl, optionally substituted heterocyclicalkyl, or optionally substituted alkylheteroalkyl.
- R 8 is optionally substituted alkyl, optionally substituted alkenyl optionally substituted cycloalkyl, optionally substituted alkynyl, optionally substituted aryl, optionally substituted heteroaryl, optionally substituted arylalkyl, optionally substituted heteroarylalkyl, optionally substituted heterocyclic, optionally substituted heteroalkyl, optionally substituted heterocyclicalkyl, or optionally substituted alkylheteroalkyl.
- a 4 is R 9 -COO", wherein R 9 is optionally substituted alkyl, optionally substituted alkenyl, optionally substituted cycloalkyl, optionally substituted alkynyl, optionally substituted aryl, optionally substituted heteroaryl, optionally substituted arylalkyl, optionally substituted heteroarylalkyl, optionally substituted heterocyclic, optionally substituted heteroalkyl, optionally substituted heterocyclicalkyl, or optionally substituted alkylheteroalkyl.
- a preferred embodiment of this invention comprises a compound of formula (II) wherein A is A4, i.e., R 9 -COO " , wherein R 9 is optionally substituted aryl, and one of the optional substituents is heteroarylalkyl which is further substituted by a (Ci to Cg) alkyl and an optionally substituted (C2 to Cg) alkenyl moiety, wherein the optional substituents on the alkenyl moiety are -CO2R'", wherein R'" is (Cj to Cg) alkyl; and a heteroaryl moiety, for example, thiophene.
- a 5 is -NR 10 -C(O)R ⁇ , wherein R 10 and R 11 are the same or different and are optionally substituted alkyl, optionally substituted cycloalkyl, optionally substituted alkenyl optionally substituted alkynyl, optionally substituted aryl, optionally substituted heteroaryl, optionally substituted arylalkyl, optionally substituted heteroarylalkyl, optionally substitute heterocyclic, optionally substituted heteroalkyl, optionally substituted heterocyclicalkyl, or optionally substituted alkylheteroalkyl; or wherein R 10 and R 11 , together with the nitrogen and carbonyl to which they are bound, form an optionally substituted, saturated or unsaturated, 4-, 5-, 6- or 7-membered ring.
- Ag is -NR 12 -SO2R 1 , wherein R 12 and R 13 are the same or different and are optionally substituted alkyl, optionally substituted cycloalkyl, optionally substituted alkenyl optionally substituted alkynyl, optionally substituted aryl, optionally substituted heteroaryl, optionally substituted arylalkyl, optionally substituted heteroarylalkyl, optionally substitute heterocyclic, optionally substituted heteroalkyl, optionally substituted heterocyclicalkyl, or optionally substituted alkylheteroalkyl; or wherein R 12 and R 13 , together with the nitrogen and sulfone to which they are bound, form an optionally substituted, saturated or unsaturated, 4-, 5-, 6- or 7-membered ring.
- a 7 is -O-(CH 2 ) m -C(O)R 14 , wherein m is an integer from 0 to 10; and R 14 is hydrogen, hydroxyl, optionally substituted alkyl, optionally substituted cycloalkyl, optionally substituted alkenyl, optionally substituted alkynyl, optionally substituted aryl, optionally substituted heteroaryl, optionally substituted arylalkyl, optionally substituted heteroarylalkyl, optionally substituted heterocyclic, optionally substituted heteroalkyl, optionally substituted heterocyclicalkyl, or optionally substituted alkylheteroalkyl; or wherein when m is an integer from 1 to 10, R 14 may form an optionally substituted, saturated or unsaturated, 4-, 5-, 6- or 7-membered ring together with one of the methylene carbons.
- a 8 is -0-(CH 2 ) r -A'-C(0)R 15 , wherein r is an integer from 0 to 10; A' is O, N, or S; and R 15 is hydrogen, hydroxyl, optionally substituted alkyl, optionally substituted cycloalkyl, optionally substituted alkenyl, optionally substituted alkynyl, optionally substituted aryl, optionally substituted heteroaryl, optionally substituted arylalkyl, optionally substituted heteroarylalkyl, optionally substituted heterocyclic, optionally substituted heteroalkyl, optionally substituted heterocyclicalkyl, or optionally substituted alkylheteroalkyl; or R 15 may form an optionally substituted, saturated or unsaturated, 4-, 5-, 6- or 7-membered ring together with one of the methylene carbons; provided that when A' is O or S, r must be an integer from 1 to 10.
- the instant polymer resins and linkage moieties are particularly useful in preparing compounds of formula (II) by resin-bound synthesis.
- the instant resin may be coupled with a compound (or a plurality of compounds) in order to form a resin-bound compound intermediate (or a plurality of resin- bound compound intermediates). Because of the structure of the resin of formula (I), cleavage of the carbon atom-heteroatom bond of the resin-bound compound intermediate to yield a compound of formula (II) which has a -COOH, cyclic or acyclic amide, cyclic or acyclic sulfonamide, hydroxy, -NH or -SH group at the cleavage position, is synthetically possible.
- each of these groups offers its own unique pharmacological properties.
- the instant resins and linkage moieties allow a variety of chemical reactions, or additional synthetic chemistry, to be conducted on compounds attached thereto, without cleavage of the compound from the resin until the attached compounds are fully derivatized.
- the attached compounds may be cleaved from the resin by cleaving the carbon atom-heteroatom bond of the resin-bound compound intermediate, for example, using mild acid conditions, in order to produce compounds of formula (II).
- polymer resins of this invention also allow the successful preparation of libraries of molecularly diverse compounds which, upon cleavage from the resin, have a -COOH, cyclic or acyclic amide, cyclic or acyclic sulfonamide, hydroxy, -NH or -SH group at the cleavage position.
- the compounds prepared by the methods described herein can be screened in assays developed for determining lead compounds as pharmaceutical agents.
- the invention is in a method for preparing a compound of formula (II by resin-bound synthesis, said method comprising the steps of: (i) attaching a compound comprising at least one heteroatom to a polymeric resin of formula (I):
- X is O, S, or N-R, wherein R is hydrogen, alkyl, aryl or arylalkyl; P is a polymer support; Z is a bond, optionally substituted aryl or optionally substituted heteroaryl, wherein the optional substituents are alkyl, aryl, nitro, halogen or methoxy, or Z is -COOR', wherein R' is (C2 to C20) alkyl optionally having one or more intervening aryl groups; W is a leaving group that is readily displaceable by an oxygen, nitrogen or sulfur anion, including, but not limited to, chlorine, bromine, iodine, -OSO 2 R", wherein R" is alkyl, optionally substituted aryl, or perfluoroalkyl; R 1 , R 2 , R 3 and R 4 are, independently from one another, hydrogen, (C j to C 4 ) alkyl, (C 3 to CJ Q ) cyclic alkyl or optionally
- one suitable method according to this invention for attaching the compound to be derivatized to a resin of formula (I), is by an S N 2 displacement of moiety W with the heteroatom used to link the compound to the resin.
- 3-Scheme 1 is attached to the resin of formula (I) wherein P is a polystyrene backbone; Z is phenyl; X is O; W is chlorine; and R 1 , R 2 , R 3 and R 4 are each hydrogen, i.e., 2-Scheme 1.
- the compound to be derivatized in order to produce a compound of formula (II) is bound to a polymer resin through a carbon-heteroatom bond to give a resin-bound compound intermediate.
- the compound to be derivatized will comprise at least one heteroatom which is to be linked to the polymer support through a carbon atom of a linker group (i.e., C*).
- the compound is bound to the polymer support through a linker group of formula (IA) comprising the following moiety - ,, -Z-(CR 1 R 2 ) n -X-(C*R 3 R 4 W)", wherein Z is defined as an optionally substituted aryl group or an optionally substituted heteroaryl group, wherein the optional substituents are alkyl, aryl, nitro, halogen or methoxy, or Z is -COOR', wherein R' is (C2 to C20) lkyl optionally having one or more intervening aryl groups; X is a heteroatom; W is a leaving group that is readily displaceable by an oxygen, nitrogen or sulfur anion, including, but not limited to, chlorine, bromine, iodine, -OSO2R", wherein R" is alkyl, optionally substituted aryl, or perfluoroalkyl; R 1 , R 2 , R 3 and R 4 are, independently from one another, hydrogen
- Z is preferably an optionally substituted aryl moiety, more preferably, an optionally substituted phenyl moiety.
- Preferred optional substituents on moiety Z are nitro, halogen and/or methoxy.
- the heteroatom of the compound in order for the compound to be linked to the resin, the heteroatom of the compound must displace moiety W of the linker, so that a resin- bound compound intermediate is produced.
- conventional procedures may be used in order to attach the linker to the polymer support P, so that a compound of formula (I) is produced.
- the linker may be reacted with a chloromethyl cross-linked divinylbenzene polystyrene resin.
- Preferred linker groups of formula (IA), i.e., Z-(C-R 1 R 2 ) n -X-(C*-R 3 R 4 W), for use in the methods disclosed herein include, but are not limited to, the following linker groups: -Ph-CH 2 -O-CH 2 ⁇ -, wherein Z is phenyl ("Ph"); X is O; and R 1 , R 2 , R 3 and R 4 are each hydrogen; W is CI and n is 1; or -Ph-CH2-S-CH 2 C1-, wherein Z is phenyl; X is S; and R 1 , R 2 , R 3 and R 4 are each hydrogen; W is CI and n is 1.
- the polymer support is polystyrene-based, e.g., a chloromethylpolystyrene resin known as the Merrifield resin
- the optionally substituted phenyl moiety that is Z is also pan of the polymer resin.
- the polymer support is then further functionalized in order to couple the remaining portion of the linker to the polymer support using methods such as those shown in Schemes 1 and 2, below.
- cleavage may be accomplished by treating the resin-bound compound intermediate with a strong protic acid.
- the acidic cleavage conditions include, but are not limited to, treatment with trifluoroacetic acid ("TFA”), hydrofluoric acid (“HF”), hydrochloric acid (“HCl”), hydrobromic acid (“HBr”), pyridinium hydrofluoride, sulfuric acid (“H2SO4"), trifluormethanesulfonic acid (commonly referred to as triflic acid), boron trifluoride (“BF3”), methanesulfonic acid or mixtures thereof.
- Cleavage methods may be carried out in solution or by applying the acid to the resin-bound compound intermediate(s), neat Preferred cleavage conditions utilize 25% TFA. Further, an addition of 1% veratrol or ethanedithiol to the cleavage mixture may be used to prevent undesirable side reactions of the liberated compound of formula (II).
- cleavage of the carbon-heteroatom bond for linker groups with sulfur heteroatoms may be accomplished with silver or mercury salts using conditions known to one of ordinary skill in the art.
- A is A 3 , i.e.,-SR 8
- the end-product compound of formula (II) may be desulfurized using conditions known in the art, such as treatment with Raney nickel, in order to produce a compound which contains a hydrogen at the position where the compound was attached to the resin.
- the invention is in a method for preparing a compound of formula (II) which is resin-bound, said process comprising the steps of:
- the resin-bound compound intermediate may be derivatized immediately by modifying the compound with additional synthetic chemistry or stored for future derivatization of the resin-bound compound. If the compound intermediate is derivatized, the resulting derivatized resin-bound compound intermediate is a precursor to the compound of formula (II), wherein after cleavage, the compound is a compound of formula (II), i.e., it has a -COOH, cyclic or acyclic amide, cyclic or acyclic sulfonamide, hydroxy, -NH or -SH group on the carbon where it was bound to a polymeric resin.
- the resin-bound compounds prepared according to this invention may be screened as pharmaceutical agents in the assays described below.
- this invention is in a method for preparing a library of molecularly diverse compounds, each comprising at least one heteroatom, by resin-bound synthesis, said method comprising the steps of:
- the libraries are considered to be combinatorial libraries because the compounds generated from the synthetic methods are molecularly diverse and are prepared simultaneously.
- the libraries are prepared on the polymer resins using the linkers described herein. For example, a plurality of compounds comprising at least one heteroatom, are each attached to an individual polymer resin support of formula (I) through a carbon-heteroatom bond to give a plurality of resin-bound compound intermediates.
- the plurality of resin-bound compound intermediates may be reacted with one or more reagents, in one reaction vessel.
- aliquots of the resin-bound compound intermediates may be reacted with one or more reagents; each one of which will modify the compound attached to the resin as a resin-bound compound intermediate; and then the resultant product in each separate aliquot is mixed together with the products formed in the other aliquots to form the library of derivatized compounds.
- This first modified/derivatized library may then be further derivatized by repeating the process of dividing and recombining the derivatized resin- bound compound intermediates formed by the additional synthetic chemistry.
- each polymer support unit for example, a bead, bears a single derivatized compound species created by the additional synthetic chemistry performed on the resin-bound compound intermediate.
- the steps of optionally dividing and recombining the resin-bound compound intermediates into portions are for purposes of varying the derivatization on the compounds which are generated by the combinatorial synthesis. See, for example, Moss et al., Ann. Rep. Med. Chem., 28, p. 315 (1993) for the split-synthesis method of preparing peptide libraries of compounds, variations on which may be used to prepare the non-peptide libraries of this invention. It will also be obvious to the skilled artisan that the resin-bound compound intermediates may be divided into portions at any point during the synthetic scheme. The portions may be recombined at any point during the scheme or, further iterations may be applied if more derivatization is required.
- the derivatized aliquots may be recombined and reacted with one or more additional reagents in one reaction vessel.
- each aliquot may be subdivided into further aliquots and reacted as described herein. Therefore, it will be obvious to the skilled artisan that the steps of dividing the portions, performing additional synthetic chemistry and recombining the portions, may each be carried out more than once.
- the steps of optionally dividing and recombining the resin- bound compound intermediates into portions are for purposes of varying the derivatization, depending upon the type of diversity required for the hbrary of end-product compounds being prepared.
- the compounds can be separated and characterized by conventional analytical techniques known to the skilled artisan, for example infrared spectroscopy or mass spectroscopy.
- the compounds may be characterized while remaining resin-bound or they can be cleaved from the resin using the conditions described above, and then analyzed.
- a portion of resin-bound compound intermediates may be cleaved so that only a portion of the compound members are cleaved from the resin, characterized and analyzed, while leaving the remaining portion of the compound members of the library bound to the resin as derivatized resin-bound compound intermediates.
- this library is considered to be a "partially cleaved" library of derivatized compounds, i.e., the library comprises (a) derivatized compounds which are cleaved from the resin and (b) derivatized compounds which remain resin-bound.
- the library comprises (a) derivatized compounds which are cleaved from the resin and (b) derivatized compounds which remain resin-bound.
- a chloromethoxymethylpolystyrene resin of the formula (I) wherein P is polystyrene; Z is phenyl; X is O; W is chlorine; and R 1 , R 2 , R 3 and R 4 are each hydrogen (see 2- Scheme 1. is prepared as shown in Scheme 1 by reaction of commercially available hydroxymethylpolystyrene resin (1 -Scheme 1. with, e.g., trioxane and hydrochloric acid in a suitable nonprotonic solvent. Further reaction with the anion of a phenol, such as 2z Scheme 1. provides resin-bound compound intermediates such as 4-Scheme 1. These may be further derivatized by additional synthetic chemistry to form further compounds of interest which are also bound to the resin. The derivatized resin-bound compounds may be liberated from the resin to produce compounds of formula (II) by, e.g., treatment with an acid such as TFA.
- Scheme 3 shows the attachment of several dopaminergics to a resin of formula (I), wherein P is polystyrene; Z is phenyl; X is S; W is chlorine; and R 1 , R 2 , R 3 and R 4 are each hydrogen (see 1 -Scheme 3). via thioacetal linkages.
- these compounds are readily liberated from the resin by treatment with acid to give a compound of formula (II).
- reaction of the phenol 2-Scheme 3 with a base, e.g., CS2CO3 to form its anion followed by reaction with chloromethylthiomethylpolystyrene (1-Scheme 3) gave the resin bound compound 2r Scheme 3.
- Scheme 5 shows the attachment of a thiol to a resin via a dithioacetal and a thioacetal linkages.
- the cesium mercaptide was reacted with the resin l Scheme 3 to give 2-Scheme 5 wherein the compound, 1-Scheme 5. is bound to the resin (j Scheme 3 " ) by a dithioacetal linkage.
- the mercaptide of 1-Scheme 5 was reacted with the chloromethoxymethyl resin, 2-Scheme 1. to give 3-Scheme 5 wherein the compound, 1-Scheme 5. is bound to the resin (2-Scheme 1. by a thioacetal linkage.
- the thioacetal linkage was readily cleaved by acid, but the dithioacetal linkage required prolonged treatment with strong acid or metal ions such as silver or mercury for cleavage.
- This differentiation may be useful in that the compound of interest may be attached via the thioacetal linker while a tag for recording the chemical history of the bead could be attached via the dithioacetal linker.
- the compound could be released first for biological assays, and the tags of the active beads could be read later to identify the active compound. See, for example, a description of synthesis using tags in WO 9408051, published April 14, 1994, the relevant subject matter of which is incorporated herein by reference.
- liberated compound of formula (II) is a thiol
- desulfurization after release from the resin for example with Raney nickel, gives the compound with a hydrogen at the position which was attached to the resin.
- Example 1 Preparation of chlorornethoxvmethvlpolvstvrene resin (2-Scheme 1.
- Example 4 Preparation of the chloromethylthiomethylpolystyrene resin (4-Scheme 2) (a. Thiouroniummethylpolvstyrene hvdrochloride (2-Scheme 2. A mixture of Merrifield's peptide resin (available from Aldrich; 2% crosslinked, 1.015 mM Cl g) (5.00 g, 5.075 mM) and thiourea (1.55 g, 20.362 mM) in DMF (50 mL) were gently stirred at ambient temperature for 48 hr.
- 4-Scheme 2 a. Thiouroniummethylpolvstyrene hvdrochloride (2-Scheme 2.
- a mixture of Merrifield's peptide resin available from Aldrich; 2% crosslinked, 1.015 mM Cl g) (5.00 g, 5.075 mM) and thiourea (1.55 g, 20.362 mM) in DMF (50 mL) were gently stir
- Example 5 Preparation of ethyl 4-phenoxythiomethylmethylpolystyrenebenzoate resin (5- Scheme 21 A mixture of ethyl 4-hydroxybenzoate (0.0532 g, 0.3024 mM) and cesium carbon ⁇ ate (0.1310 g, 0.4022 nM) in DMF (5 mL) was stirred at ambient temperature for 4 hr. Chloromethylthiomethylpolystyrene resin (4-Scheme 21 (0.8066 mM Cl/g) (0.1250 g, 0.1008 mM) was added in one portion and stirred at ambient temperature for 18 hr.
- the resin-intermediate was collected on a coarse fritted glass filter, washed successively with 3x30 mL portions of DMF, 1 :1 DMF/H 2 O, water, DMF, THF, methylene chloride, and methanol, and then air-dried to provide 0.1000 g (72%) of product.
- IR (KBr) 1700 cm" 1 (C O).
- a small sample of 5-Scheme 2 was treated with 25% TFA/methylene chloride at ambient temperature for 5 min.
- TLC sica gel, 10% methanol/chloroform
- Example 6 Preparation of 6-(methoxythiomethylpolvstyrene1-S(-1-eticlopride resin
- S(-)-eticlopride hydrochloride S(-)-3-chloro-5-ethyl-N-[(l-ethyl-2- pyrrolidinyl)methyl]-6-hydroxy-2-methoxybenzamide hydrochloride
- cesium carbonate 0.64477 g, 1.9880 mM
- Example 7 Preparation of ester of (E1- ⁇ -rr2-butvl-l-r4-carboxvphenvl1methvn-l-H- imidazol-5-vl1methvlene-2-thiophenepropanoic acid ethvl ester and hvdroxymethylthiomethyl-polystyrene resin
- Example 3 The procedure of Example 3 was used except that the esterification was carried out using DMF as the solvent and the reaction was heated at 45°C for 48 hr. The resin product was obtained in 96% yield.
- This resin also cleaved to liberate the starting acid when exposed to vapors of methylene chloride, ethanedithiol, and TFA.
- linkers and polymer resins of this invention may be used in a variety of combinatorial methods for synthesizing and identifying a large number of molecularly diverse compounds, simultaneously.
- the instant invention may be applied to (i) the "multi-pin" method described in Geysen et al., Proc. Natl. Acad. Sci. USA., 81, p. 3998 (1984); U.S. Patent 4,708,871
- the compounds may be screened in assays which have been developed for determining lead compounds as pharmaceutical agents.
- the components of the library are screened in groups of multiple compounds. Therefore, once the library of compounds has been synthesized, there must be some method to deconvolute the results of screening such that individual active compounds can be identified. Based upon the disclosure herein, it will be clear to the skilled artisan that there are many methods for deconvolution of the combinatorial library. For example, if the compounds of the library are screened on a solid support, they may be physically segregated so that individual active compounds may be directly selected and identified.
- the library may be deconvoluted in an iterative approach, which involves resynthesis of mixtures of decreasing complexity until a single compound is identified, or in a scanning approach, in which the various substituents on the compound, are evaluated independently and the structure of active compounds are determined deductively.
- iterative and scanning approaches to deconvolution of a combinatorial library of compounds see, for example, Houghten et al., Nature, 354, p. 84 (1991) and Still et al., WO 94/08051, published April 14, 1994.
- a representative binding assay is as follows. Other binding assays or functional assays that are known by, or that would be obvious to the skilled artisan, may be performe as well. Tissue containing the appropriate target receptor are homogenized, filtered through cheesecloth and centrifuged at 1500 x g for 10 minutes. The supernatant is decanted and the pellet is resuspended in an appropriate incubation buffer, e.g. 75 mM TriS ' HCl, pH 7.4 containing 12.5 mM MgCl2 and 1.5 mM EDTA.
- an appropriate incubation buffer e.g. 75 mM TriS ' HCl, pH 7.4 containing 12.5 mM MgCl2 and 1.5 mM EDTA.
- Membranes equivalent to 100 g protein are incubated with 50 pmol radiolabeled receptor ligand and an appropriate amount of the test library mixture in a total volume of 5001 for 1 hr. at 37°C.
- the binding reaction is terminated by dilution with the addition of 5 ml of cold incubation buffer and the bound tracer is separated from free by filtration on Whatman GF/C filter paper. The filter paper is washed several times with cold incubation buffer and then counted to determine the amount of bound ligand.
- Specific binding is defined as the portion of radiolabeled receptor ligand binding which can be competed with by a high concentration of unlabeled receptor ligand.
- the presence of a competing ligand in the Ubrary test mixture is evidenced by a reduction in specific binding of the radiolabeled receptor hgand in the presence of the library test mixture.
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Applications Claiming Priority (3)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US25959494A | 1994-06-14 | 1994-06-14 | |
| US259594 | 1994-06-14 | ||
| PCT/US1995/007150 WO1995034813A1 (en) | 1994-06-14 | 1995-06-05 | Resins for solid state synthesis |
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| EP (1) | EP0765477A4 (de) |
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| GB9716456D0 (en) * | 1997-08-05 | 1997-10-08 | Univ St Andrews | Modified ethylene polymer |
| GB9717173D0 (en) | 1997-08-13 | 1997-10-22 | Akzo Nobel Nv | Solid phase supports |
| CA2222833A1 (en) * | 1997-11-28 | 1999-05-28 | Brent R. Stranix | Functional polymers bearing non-metal oxyacid derivatives on dimethylene spacers |
| GB9727126D0 (en) * | 1997-12-22 | 1998-02-25 | Zeneca Ltd | Process |
| WO2000026262A2 (en) * | 1998-11-05 | 2000-05-11 | Mitokor | Functionalized polymeric substrates for binding molecular moieties |
| WO2000053578A1 (en) * | 1999-03-11 | 2000-09-14 | Kuraray Co., Ltd. | Vitamin d derivatives and process for the preparation thereof |
| FR2809405B1 (fr) * | 2000-05-25 | 2002-08-16 | Ifremer | Copolymeres statistiques insolubles presentant une affinite specifique envers un protiste donne, leurs utilisations et leur procede de selection |
| FR2826454B1 (fr) * | 2001-06-26 | 2003-10-17 | Bio Merieux | Cartes d'analyse |
| CA2656858C (en) * | 2006-07-09 | 2016-01-19 | Techfields Biochem Co. Ltd | Positively charged water-soluble prodrugs of acetylsalicylic acid |
| US20090238763A1 (en) | 2006-07-09 | 2009-09-24 | Chongxi Yu | High penetration compositions and uses thereof |
| US20090221703A1 (en) | 2006-07-09 | 2009-09-03 | Chongxi Yu | High penetration composition and uses thereof |
| KR20150058566A (ko) | 2007-06-04 | 2015-05-28 | 테크필즈 인크 | 매우 높은 피부 및 막 침투율을 가지는 nsaia 약물전구체 및 이들의 새로운 의약적 용도 |
| BR122021011394B1 (pt) | 2008-12-04 | 2021-09-28 | Chongxi Yu | Composição de alta penetração de um fármaco principal, e uso de uma hpc |
| CN111012914A (zh) | 2012-01-18 | 2020-04-17 | 苏州泰飞尔医药有限公司 | 治疗肺部疾病的高穿透力前药组合物和医药组合物 |
Citations (2)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US4659774A (en) * | 1985-11-01 | 1987-04-21 | American Hoechst Corporation | Support for solid-phase oligonucleotide synthesis |
| WO1992004384A1 (en) * | 1990-08-31 | 1992-03-19 | Regents Of The University Of Minnesota | Polyethylene glycol derivatives for solid-phase applications |
Family Cites Families (2)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US4037037A (en) * | 1971-07-28 | 1977-07-19 | Yeda Research & Development Co. Ltd. | Novel method of organic synthesis to form a polymer-bound active species |
| US5650489A (en) * | 1990-07-02 | 1997-07-22 | The Arizona Board Of Regents | Random bio-oligomer library, a method of synthesis thereof, and a method of use thereof |
-
1995
- 1995-06-05 WO PCT/US1995/007150 patent/WO1995034813A1/en not_active Ceased
- 1995-06-05 EP EP95922224A patent/EP0765477A4/de not_active Withdrawn
- 1995-06-05 JP JP8502297A patent/JPH10502102A/ja active Pending
Patent Citations (2)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US4659774A (en) * | 1985-11-01 | 1987-04-21 | American Hoechst Corporation | Support for solid-phase oligonucleotide synthesis |
| WO1992004384A1 (en) * | 1990-08-31 | 1992-03-19 | Regents Of The University Of Minnesota | Polyethylene glycol derivatives for solid-phase applications |
Non-Patent Citations (1)
| Title |
|---|
| See also references of WO9534813A1 * |
Also Published As
| Publication number | Publication date |
|---|---|
| WO1995034813A1 (en) | 1995-12-21 |
| EP0765477A1 (de) | 1997-04-02 |
| JPH10502102A (ja) | 1998-02-24 |
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