EP1960929A4 - Systeme et procede de nettoyage de donnees genetiques bruitees, et utilisation de donnees genetiques, phenotypiques et cliniques pour faire des previsions - Google Patents

Systeme et procede de nettoyage de donnees genetiques bruitees, et utilisation de donnees genetiques, phenotypiques et cliniques pour faire des previsions

Info

Publication number
EP1960929A4
EP1960929A4 EP06838311A EP06838311A EP1960929A4 EP 1960929 A4 EP1960929 A4 EP 1960929A4 EP 06838311 A EP06838311 A EP 06838311A EP 06838311 A EP06838311 A EP 06838311A EP 1960929 A4 EP1960929 A4 EP 1960929A4
Authority
EP
European Patent Office
Prior art keywords
data
predictions
genetic
cleaning raised
raised
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Ceased
Application number
EP06838311A
Other languages
German (de)
English (en)
Other versions
EP1960929A2 (fr
Inventor
Matthew Rabinowitz
Milena Banjevic
Zachary Paul Demko
David Scott Johnson
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Natera Inc
Original Assignee
Gene Security Network Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Priority claimed from US11/496,982 external-priority patent/US20070027636A1/en
Application filed by Gene Security Network Inc filed Critical Gene Security Network Inc
Priority to EP15199388.8A priority Critical patent/EP3012760A1/fr
Priority to EP11175867.8A priority patent/EP2437191B1/fr
Priority to EP18212459.4A priority patent/EP3599609A1/fr
Priority to EP17207702.6A priority patent/EP3373175B1/fr
Publication of EP1960929A2 publication Critical patent/EP1960929A2/fr
Publication of EP1960929A4 publication Critical patent/EP1960929A4/fr
Ceased legal-status Critical Current

Links

Classifications

    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6809—Methods for determination or identification of nucleic acids involving differential detection
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing
    • C12Q1/6874—Methods for sequencing involving nucleic acid arrays, e.g. sequencing by hybridisation
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/20—Allele or variant detection, e.g. single nucleotide polymorphism [SNP] detection
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
    • G16B40/20—Supervised data analysis
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
    • G16B40/30—Unsupervised data analysis
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/10—Ploidy or copy number detection
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/40—Population genetics; Linkage disequilibrium
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Health & Medical Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Chemical & Material Sciences (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Medical Informatics (AREA)
  • General Health & Medical Sciences (AREA)
  • Biophysics (AREA)
  • Biotechnology (AREA)
  • Organic Chemistry (AREA)
  • Data Mining & Analysis (AREA)
  • Theoretical Computer Science (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Analytical Chemistry (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Evolutionary Biology (AREA)
  • Wood Science & Technology (AREA)
  • Zoology (AREA)
  • Molecular Biology (AREA)
  • Genetics & Genomics (AREA)
  • Bioethics (AREA)
  • Databases & Information Systems (AREA)
  • Software Systems (AREA)
  • Public Health (AREA)
  • Artificial Intelligence (AREA)
  • Evolutionary Computation (AREA)
  • Computer Vision & Pattern Recognition (AREA)
  • Epidemiology (AREA)
  • General Engineering & Computer Science (AREA)
  • Immunology (AREA)
  • Microbiology (AREA)
  • Biochemistry (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
  • Management, Administration, Business Operations System, And Electronic Commerce (AREA)
EP06838311A 2005-11-26 2006-11-22 Systeme et procede de nettoyage de donnees genetiques bruitees, et utilisation de donnees genetiques, phenotypiques et cliniques pour faire des previsions Ceased EP1960929A4 (fr)

Priority Applications (4)

Application Number Priority Date Filing Date Title
EP15199388.8A EP3012760A1 (fr) 2005-11-26 2006-11-22 Systeme et procede de nettoyage de donnees genetiques bruitees, et utilisation de donnees genetiques, phenotypiques et cliniques pour faire des previsions
EP11175867.8A EP2437191B1 (fr) 2005-11-26 2006-11-22 Procédé et système de détection d'anomalies chromosomiques
EP18212459.4A EP3599609A1 (fr) 2005-11-26 2006-11-22 Système et procédé pour nettoyer des données génétiques bruyantes et au moyen de données pour faire des prédictions
EP17207702.6A EP3373175B1 (fr) 2005-11-26 2006-11-22 Système et procédé pour nettoyer des données génétiques bruyantes et au moyen de données pour faire des prédictions

Applications Claiming Priority (9)

Application Number Priority Date Filing Date Title
US73988205P 2005-11-26 2005-11-26
US74230505P 2005-12-06 2005-12-06
US75439605P 2005-12-29 2005-12-29
US77497606P 2006-02-21 2006-02-21
US78950606P 2006-04-04 2006-04-04
US81774106P 2006-06-30 2006-06-30
US11/496,982 US20070027636A1 (en) 2005-07-29 2006-07-31 System and method for using genetic, phentoypic and clinical data to make predictions for clinical or lifestyle decisions
US84661006P 2006-09-22 2006-09-22
PCT/US2006/045281 WO2007062164A2 (fr) 2005-11-26 2006-11-22 Systeme et procede de nettoyage de donnees genetiques bruitees, et utilisation de donnees genetiques, phenotypiques et cliniques pour faire des previsions

Related Child Applications (4)

Application Number Title Priority Date Filing Date
EP17207702.6A Division EP3373175B1 (fr) 2005-11-26 2006-11-22 Système et procédé pour nettoyer des données génétiques bruyantes et au moyen de données pour faire des prédictions
EP18212459.4A Division EP3599609A1 (fr) 2005-11-26 2006-11-22 Système et procédé pour nettoyer des données génétiques bruyantes et au moyen de données pour faire des prédictions
EP15199388.8A Division EP3012760A1 (fr) 2005-11-26 2006-11-22 Systeme et procede de nettoyage de donnees genetiques bruitees, et utilisation de donnees genetiques, phenotypiques et cliniques pour faire des previsions
EP11175867.8A Division EP2437191B1 (fr) 2005-11-26 2006-11-22 Procédé et système de détection d'anomalies chromosomiques

Publications (2)

Publication Number Publication Date
EP1960929A2 EP1960929A2 (fr) 2008-08-27
EP1960929A4 true EP1960929A4 (fr) 2009-01-28

Family

ID=38067926

Family Applications (5)

Application Number Title Priority Date Filing Date
EP06838311A Ceased EP1960929A4 (fr) 2005-11-26 2006-11-22 Systeme et procede de nettoyage de donnees genetiques bruitees, et utilisation de donnees genetiques, phenotypiques et cliniques pour faire des previsions
EP18212459.4A Ceased EP3599609A1 (fr) 2005-11-26 2006-11-22 Système et procédé pour nettoyer des données génétiques bruyantes et au moyen de données pour faire des prédictions
EP11175867.8A Active EP2437191B1 (fr) 2005-11-26 2006-11-22 Procédé et système de détection d'anomalies chromosomiques
EP15199388.8A Ceased EP3012760A1 (fr) 2005-11-26 2006-11-22 Systeme et procede de nettoyage de donnees genetiques bruitees, et utilisation de donnees genetiques, phenotypiques et cliniques pour faire des previsions
EP17207702.6A Active EP3373175B1 (fr) 2005-11-26 2006-11-22 Système et procédé pour nettoyer des données génétiques bruyantes et au moyen de données pour faire des prédictions

Family Applications After (4)

Application Number Title Priority Date Filing Date
EP18212459.4A Ceased EP3599609A1 (fr) 2005-11-26 2006-11-22 Système et procédé pour nettoyer des données génétiques bruyantes et au moyen de données pour faire des prédictions
EP11175867.8A Active EP2437191B1 (fr) 2005-11-26 2006-11-22 Procédé et système de détection d'anomalies chromosomiques
EP15199388.8A Ceased EP3012760A1 (fr) 2005-11-26 2006-11-22 Systeme et procede de nettoyage de donnees genetiques bruitees, et utilisation de donnees genetiques, phenotypiques et cliniques pour faire des previsions
EP17207702.6A Active EP3373175B1 (fr) 2005-11-26 2006-11-22 Système et procédé pour nettoyer des données génétiques bruyantes et au moyen de données pour faire des prédictions

Country Status (8)

Country Link
EP (5) EP1960929A4 (fr)
JP (4) JP6121642B2 (fr)
CN (1) CN101346724B (fr)
AU (1) AU2006318425B2 (fr)
CA (1) CA2632230C (fr)
ES (1) ES2634665T3 (fr)
HK (1) HK1224053A1 (fr)
WO (1) WO2007062164A2 (fr)

Families Citing this family (102)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US8024128B2 (en) 2004-09-07 2011-09-20 Gene Security Network, Inc. System and method for improving clinical decisions by aggregating, validating and analysing genetic and phenotypic data
US9424392B2 (en) 2005-11-26 2016-08-23 Natera, Inc. System and method for cleaning noisy genetic data from target individuals using genetic data from genetically related individuals
US11111543B2 (en) 2005-07-29 2021-09-07 Natera, Inc. System and method for cleaning noisy genetic data and determining chromosome copy number
US8515679B2 (en) 2005-12-06 2013-08-20 Natera, Inc. System and method for cleaning noisy genetic data and determining chromosome copy number
US8532930B2 (en) 2005-11-26 2013-09-10 Natera, Inc. Method for determining the number of copies of a chromosome in the genome of a target individual using genetic data from genetically related individuals
US10083273B2 (en) 2005-07-29 2018-09-25 Natera, Inc. System and method for cleaning noisy genetic data and determining chromosome copy number
US11111544B2 (en) 2005-07-29 2021-09-07 Natera, Inc. System and method for cleaning noisy genetic data and determining chromosome copy number
US10081839B2 (en) 2005-07-29 2018-09-25 Natera, Inc System and method for cleaning noisy genetic data and determining chromosome copy number
GB0523276D0 (en) 2005-11-15 2005-12-21 London Bridge Fertility Chromosomal analysis by molecular karyotyping
WO2008115497A2 (fr) * 2007-03-16 2008-09-25 Gene Security Network Système et procédé pour nettoyer des données génétiques bruyantes et déterminer un numéro de copie de chromosome
EP2152912B1 (fr) * 2007-06-07 2013-12-25 Haplomic Technologies Pty Ltd Procedes in situ de cartographie genetique et d'haplotypage
PL2557520T3 (pl) 2007-07-23 2021-10-11 The Chinese University Of Hong Kong Określanie zaburzenia równowagi sekwencji kwasu nukleinowego
WO2009051766A1 (fr) * 2007-10-15 2009-04-23 23Andme, Inc. Hérédité familiale
EP2321642B1 (fr) 2008-08-04 2017-01-11 Natera, Inc. Procédés pour une classification d'allèle et une classification de ploïdie
US12129514B2 (en) 2009-04-30 2024-10-29 Molecular Loop Biosolutions, Llc Methods and compositions for evaluating genetic markers
EP2425240A4 (fr) 2009-04-30 2012-12-12 Good Start Genetics Inc Procédés et compositions d'évaluation de marqueurs génétiques
WO2011041485A1 (fr) 2009-09-30 2011-04-07 Gene Security Network, Inc. Méthode non invasive de détermination d'une ploïdie prénatale
US11939634B2 (en) 2010-05-18 2024-03-26 Natera, Inc. Methods for simultaneous amplification of target loci
WO2011146632A1 (fr) 2010-05-18 2011-11-24 Gene Security Network Inc. Procédés de classification de ploïdie prénatale non invasive
US12152275B2 (en) 2010-05-18 2024-11-26 Natera, Inc. Methods for non-invasive prenatal ploidy calling
US10316362B2 (en) 2010-05-18 2019-06-11 Natera, Inc. Methods for simultaneous amplification of target loci
US12221653B2 (en) 2010-05-18 2025-02-11 Natera, Inc. Methods for simultaneous amplification of target loci
US12545960B2 (en) 2010-05-18 2026-02-10 Natera, Inc. Methods for simultaneous amplification of target loci
US11326208B2 (en) 2010-05-18 2022-05-10 Natera, Inc. Methods for nested PCR amplification of cell-free DNA
US11408031B2 (en) 2010-05-18 2022-08-09 Natera, Inc. Methods for non-invasive prenatal paternity testing
US9677118B2 (en) 2014-04-21 2017-06-13 Natera, Inc. Methods for simultaneous amplification of target loci
US11332793B2 (en) 2010-05-18 2022-05-17 Natera, Inc. Methods for simultaneous amplification of target loci
US20190010543A1 (en) 2010-05-18 2019-01-10 Natera, Inc. Methods for simultaneous amplification of target loci
US11332785B2 (en) 2010-05-18 2022-05-17 Natera, Inc. Methods for non-invasive prenatal ploidy calling
US11339429B2 (en) 2010-05-18 2022-05-24 Natera, Inc. Methods for non-invasive prenatal ploidy calling
US11322224B2 (en) 2010-05-18 2022-05-03 Natera, Inc. Methods for non-invasive prenatal ploidy calling
CN101894216B (zh) * 2010-07-16 2012-09-05 西安电子科技大学 从snp数据中发现与复杂疾病相关snp组的方法
US20120034603A1 (en) * 2010-08-06 2012-02-09 Tandem Diagnostics, Inc. Ligation-based detection of genetic variants
CN103608466B (zh) 2010-12-22 2020-09-18 纳特拉公司 非侵入性产前亲子鉴定方法
US9163281B2 (en) 2010-12-23 2015-10-20 Good Start Genetics, Inc. Methods for maintaining the integrity and identification of a nucleic acid template in a multiplex sequencing reaction
RU2671980C2 (ru) 2011-02-09 2018-11-08 Натера, Инк. Способы неинвазивного пренатального установления плоидности
WO2014014498A1 (fr) * 2012-07-20 2014-01-23 Verinata Health, Inc. Détection et classification de variation du nombre de copies dans un génome foetal
US8812943B2 (en) * 2011-09-23 2014-08-19 Fujitsu Limited Detecting data corruption in medical binary decision diagrams using hashing techniques
CA2852665A1 (fr) 2011-10-17 2013-04-25 Good Start Genetics, Inc. Methodes d'identification de mutations associees a des maladies
US8209130B1 (en) 2012-04-04 2012-06-26 Good Start Genetics, Inc. Sequence assembly
US8812422B2 (en) * 2012-04-09 2014-08-19 Good Start Genetics, Inc. Variant database
US10227635B2 (en) 2012-04-16 2019-03-12 Molecular Loop Biosolutions, Llc Capture reactions
US20140100126A1 (en) 2012-08-17 2014-04-10 Natera, Inc. Method for Non-Invasive Prenatal Testing Using Parental Mosaicism Data
RU2015111515A (ru) * 2012-08-31 2016-10-20 Конинклейке Филипс Н.В. Мониторинг лейкоцитов во время циклов лечения
US10679726B2 (en) * 2012-11-26 2020-06-09 Koninklijke Philips N.V. Diagnostic genetic analysis using variant-disease association with patient-specific relevance assessment
EP2971159B1 (fr) 2013-03-14 2019-05-08 Molecular Loop Biosolutions, LLC Procédés d'analyse d'acides nucléiques
KR102665592B1 (ko) * 2013-05-24 2024-05-21 시쿼넘, 인코포레이티드 유전적 변이의 비침습 평가를 위한 방법 및 프로세스
WO2014197377A2 (fr) 2013-06-03 2014-12-11 Good Start Genetics, Inc. Procédés et systèmes pour stocker des données de lecture de séquence
US10262755B2 (en) 2014-04-21 2019-04-16 Natera, Inc. Detecting cancer mutations and aneuploidy in chromosomal segments
US10577655B2 (en) 2013-09-27 2020-03-03 Natera, Inc. Cell free DNA diagnostic testing standards
US9499870B2 (en) 2013-09-27 2016-11-22 Natera, Inc. Cell free DNA diagnostic testing standards
US10851414B2 (en) 2013-10-18 2020-12-01 Good Start Genetics, Inc. Methods for determining carrier status
EP3058096A1 (fr) 2013-10-18 2016-08-24 Good Start Genetics, Inc. Procédés d'évaluation d'une région génomique d'un sujet
CA2945962C (fr) 2014-04-21 2023-08-29 Natera, Inc. Detection de mutations et de la ploidie dans des segments chromosomiques
US12492429B2 (en) 2014-04-21 2025-12-09 Natera, Inc. Detecting mutations and ploidy in chromosomal segments
US11053548B2 (en) 2014-05-12 2021-07-06 Good Start Genetics, Inc. Methods for detecting aneuploidy
US20180173846A1 (en) 2014-06-05 2018-06-21 Natera, Inc. Systems and Methods for Detection of Aneuploidy
WO2016025818A1 (fr) 2014-08-15 2016-02-18 Good Start Genetics, Inc. Systèmes et procédés pour une analyse génétique
WO2016040446A1 (fr) 2014-09-10 2016-03-17 Good Start Genetics, Inc. Procédés permettant la suppression sélective de séquences non cibles
JP2017536087A (ja) 2014-09-24 2017-12-07 グッド スタート ジェネティクス， インコーポレイテッド 遺伝子アッセイのロバストネスを増大させるためのプロセス制御
WO2016112073A1 (fr) 2015-01-06 2016-07-14 Good Start Genetics, Inc. Criblage de variants structuraux
US9864823B2 (en) 2015-03-30 2018-01-09 Uop Llc Cleansing system for a feed composition based on environmental factors
US20160292188A1 (en) * 2015-03-30 2016-10-06 Uop Llc Data cleansing system and method for inferring a feed composition
US11479812B2 (en) 2015-05-11 2022-10-25 Natera, Inc. Methods and compositions for determining ploidy
EP3303579B1 (fr) * 2015-05-28 2021-04-07 Stichting Het Nederlands Kanker Instituut- Antoni van Leeuwenhoek Ziekenhuis Analyses permettant d'identifier des éléments génétiques affectant le phénotype
JP6570929B2 (ja) * 2015-09-08 2019-09-04 国立研究開発法人農業・食品産業技術総合研究機構 特性推定モデル生成装置および方法、解析対象の特性推定装置および方法
JP6564053B2 (ja) * 2015-11-10 2019-08-21 富士フイルム株式会社 細胞間または細胞群間の同一人かどうか、他人かどうか、親子かどうか、または血縁関係かどうかの判定方法
RU2760913C2 (ru) 2016-04-15 2021-12-01 Натера, Инк. Способы выявления рака легкого
WO2018067517A1 (fr) 2016-10-04 2018-04-12 Natera, Inc. Procédés pour caractériser une variation de nombre de copies à l'aide d'un séquençage de ligature de proximité
GB201618485D0 (en) 2016-11-02 2016-12-14 Ucl Business Plc Method of detecting tumour recurrence
US10011870B2 (en) 2016-12-07 2018-07-03 Natera, Inc. Compositions and methods for identifying nucleic acid molecules
WO2018140156A1 (fr) * 2017-01-27 2018-08-02 Orig3N, Inc. Systèmes et procédés de détermination et de présentation de recommandations d'achat en fonction de profils génétiques personnels
WO2018156418A1 (fr) 2017-02-21 2018-08-30 Natera, Inc. Compositions, procédés, et kits d'isolement d'acides nucléiques
CN107145712B (zh) * 2017-04-06 2021-01-01 广州慧扬健康科技有限公司 合并症与并发症的病历统计分析系统
CN110770839B (zh) * 2017-06-20 2024-12-06 伊鲁米那股份有限公司 来自未知基因型贡献者的dna混合物的精确计算分解的方法
CA3067419A1 (fr) * 2017-06-20 2018-12-27 Illumina, Inc. Procedes et systemes de decomposition et de quantification de melanges d'adn provenant de multiples contributeurs ayant des genotypes connus ou inconnus
US20200381089A1 (en) * 2017-10-03 2020-12-03 Atlas Llc System and method of data interpretation and providing recommendations to the user on the basis of his genetic data and data on the composition of gut microbiota
US10426424B2 (en) 2017-11-21 2019-10-01 General Electric Company System and method for generating and performing imaging protocol simulations
US12084720B2 (en) 2017-12-14 2024-09-10 Natera, Inc. Assessing graft suitability for transplantation
US20190287644A1 (en) * 2018-02-15 2019-09-19 Northeastern University Correlation Method To Identify Relevant Genes For Personalized Treatment Of Complex Disease
RU2699517C2 (ru) * 2018-02-15 2019-09-05 Атлас Биомед Груп Лимитед Способ оценки риска заболевания у пользователя на основании генетических данных и данных о составе микробиоты кишечника
US12398389B2 (en) 2018-02-15 2025-08-26 Natera, Inc. Methods for isolating nucleic acids with size selection
EP3543940A1 (fr) 2018-03-23 2019-09-25 Siemens Aktiengesellschaft Procédé de fourniture de données mis en uvre par ordinateur, en particulier pour un suivi de conformité
US12024738B2 (en) 2018-04-14 2024-07-02 Natera, Inc. Methods for cancer detection and monitoring
CN110400597A (zh) * 2018-04-23 2019-11-01 成都二十三魔方生物科技有限公司 一种基于深度学习的基因型预测方法
CN108595911A (zh) * 2018-05-03 2018-09-28 中国人民解放军军事科学院军事医学研究院 早期胚胎稳定H3K4me3区域的识别方法与应用
US12234509B2 (en) 2018-07-03 2025-02-25 Natera, Inc. Methods for detection of donor-derived cell-free DNA
CN108920893B (zh) * 2018-09-06 2019-04-16 南京医科大学 一种基于人工智能的颅颌面骨骼和软组织形态预测方法
US10468141B1 (en) * 2018-11-28 2019-11-05 Asia Genomics Pte. Ltd. Ancestry-specific genetic risk scores
US12305235B2 (en) 2019-06-06 2025-05-20 Natera, Inc. Methods for detecting immune cell DNA and monitoring immune system
CN110444251B (zh) * 2019-07-23 2023-09-22 中国石油大学(华东) 基于分支定界的单体型格局生成方法
CN111192633A (zh) * 2020-01-07 2020-05-22 深圳市早知道科技有限公司 一种预测地中海贫血病表型的方法及终端设备
CN111584011B (zh) * 2020-04-10 2023-08-29 中国科学院计算技术研究所 面向基因比对的细粒度并行负载特征抽取分析方法及系统
CN111476497B (zh) * 2020-04-15 2023-06-16 浙江天泓波控电子科技有限公司 一种用于小型化平台的分配馈电网络方法
CN113095538B (zh) * 2020-06-08 2024-03-19 华北电力大学 面向灵活性运行的热电联产机组宽负荷运行动态特性建模方法
CN113284618B (zh) * 2021-04-14 2022-07-22 北京育学园健康管理中心有限公司 婴幼儿健康评估方法
JP2024523080A (ja) 2021-06-10 2024-06-28 エーライフ ヘルス インコーポレイテッド 卵巣刺激を最適化するための機械学習
EP4534685B1 (fr) * 2022-05-26 2026-04-29 BGI Shenzhen Procédé de détection du génotype foetal à partir d'un haplotype
CN115064210B (zh) * 2022-07-27 2022-11-18 北京大学第三医院（北京大学第三临床医学院） 一种鉴定二倍体胚胎细胞中染色体交叉互换位置的方法及应用
CN115268269B (zh) * 2022-07-29 2023-06-02 无锡市低碳研究院有限公司 一种基于新能源低碳的家居耗能优化系统及方法
CN115929285A (zh) * 2022-11-11 2023-04-07 西南石油大学 一种基于拉格朗日支持向量机算法的地温梯度预测方法
WO2025093197A1 (fr) * 2023-10-31 2025-05-08 Københavns Universitet Dispositif électronique de classification de perte de grossesse et procédés associés

Family Cites Families (23)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
GB9305984D0 (en) 1993-03-23 1993-05-12 Royal Free Hosp School Med Predictive assay
US6025128A (en) 1994-09-29 2000-02-15 The University Of Tulsa Prediction of prostate cancer progression by analysis of selected predictive parameters
US6720140B1 (en) 1995-06-07 2004-04-13 Invitrogen Corporation Recombinational cloning using engineered recombination sites
US5824467A (en) 1997-02-25 1998-10-20 Celtrix Pharmaceuticals Methods for predicting drug response
US5994148A (en) 1997-06-23 1999-11-30 The Regents Of University Of California Method of predicting and enhancing success of IVF/ET pregnancy
US7058517B1 (en) 1999-06-25 2006-06-06 Genaissance Pharmaceuticals, Inc. Methods for obtaining and using haplotype data
US7058616B1 (en) 2000-06-08 2006-06-06 Virco Bvba Method and system for predicting resistance of a disease to a therapeutic agent using a neural network
GB0016742D0 (en) * 2000-07-10 2000-08-30 Simeg Limited Diagnostic method
US6489135B1 (en) 2001-04-17 2002-12-03 Atairgintechnologies, Inc. Determination of biological characteristics of embryos fertilized in vitro by assaying for bioactive lipids in culture media
FR2824144B1 (fr) * 2001-04-30 2004-09-17 Metagenex S A R L Methode de diagnostic prenatal sur cellule foetale isolee du sang maternel
US6958211B2 (en) 2001-08-08 2005-10-25 Tibotech Bvba Methods of assessing HIV integrase inhibitor therapy
US6807491B2 (en) * 2001-08-30 2004-10-19 Hewlett-Packard Development Company, L.P. Method and apparatus for combining gene predictions using bayesian networks
WO2003031646A1 (fr) * 2001-10-12 2003-04-17 The University Of Queensland Selection et amplification de marqueurs genetiques multiples
US20030211522A1 (en) * 2002-01-18 2003-11-13 Landes Gregory M. Methods for fetal DNA detection and allele quantitation
CA2474982A1 (fr) 2002-02-01 2003-08-07 Rosetta Inpharmatics Llc Systemes et procedes informatiques concus pour identifier des genes et determiner des voies associees a des caracteres
US6977162B2 (en) * 2002-03-01 2005-12-20 Ravgen, Inc. Rapid analysis of variations in a genome
IL163600A0 (en) * 2002-03-01 2005-12-18 Ravgen Inc Methods for detection of genetic disorders
IL164687A0 (en) 2002-05-02 2005-12-18 Univ North Carolina Cellular libraries and methods for the preparationthereof
US20040122708A1 (en) * 2002-12-18 2004-06-24 Avinash Gopal B. Medical data analysis method and apparatus incorporating in vitro test data
EP1689884A4 (fr) * 2003-10-08 2007-04-04 Univ Boston Methodes de diagnostic prenatal d'anomalies chromosomiques
ATE435301T1 (de) * 2003-10-16 2009-07-15 Sequenom Inc Nicht invasiver nachweis fötaler genetischer merkmale
US20050221341A1 (en) * 2003-10-22 2005-10-06 Shimkets Richard A Sequence-based karyotyping
JP4437050B2 (ja) * 2004-03-26 2010-03-24 株式会社日立製作所 診断支援システム、診断支援方法および診断支援サービスの提供方法

Non-Patent Citations (3)

* Cited by examiner, † Cited by third party
Title
HOSPITAL F ET AL: "A GENERAL ALGORITHM TO COMPUTE MULTILOCUS GENOTYPE FREQUENCIES UNDER VARIOUS MATING SYSTEMS", CABIOS COMPUTER APPLICATIONS IN THE BIOSCIENCES, IRL PRESS,OXFORD, GB, vol. 12, no. 6, 1 January 1996 (1996-01-01), pages 455 - 462, XP009082303, ISSN: 0266-7061 *
No further relevant documents disclosed *
SERVIN B ET AL: "MDM: A Program to Compute Fully Informative Genotype Frequencies in Complex Breeding Schemes", JOURNAL OF HEREDITY, OXFORD UNIVERSITY PRESS, CARY, GB, vol. 93, no. 3, 1 January 2002 (2002-01-01), pages 227 - 228, XP007902080, ISSN: 0022-1503, DOI: 10.1093/JHERED/93.3.227 *

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AU2006318425A2 (en) 2008-08-21
WO2007062164A3 (fr) 2007-11-29
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JP6121642B2 (ja) 2017-04-26
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JP2016184429A (ja) 2016-10-20
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CA2632230A1 (fr) 2007-05-31
JP6430998B2 (ja) 2018-11-28
AU2006318425A1 (en) 2007-05-31
CN101346724B (zh) 2018-05-08
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EP3373175A1 (fr) 2018-09-12
CA2632230C (fr) 2019-05-07
WO2007062164A2 (fr) 2007-05-31
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