EP2247741A4 - Eléments de lecture à extrémités appariées dans le séquençage par synthèse - Google Patents

Eléments de lecture à extrémités appariées dans le séquençage par synthèse

Info

Publication number
EP2247741A4
EP2247741A4 EP09706204A EP09706204A EP2247741A4 EP 2247741 A4 EP2247741 A4 EP 2247741A4 EP 09706204 A EP09706204 A EP 09706204A EP 09706204 A EP09706204 A EP 09706204A EP 2247741 A4 EP2247741 A4 EP 2247741A4
Authority
EP
European Patent Office
Prior art keywords
paired
sequencing
synthesis
end reads
reads
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Withdrawn
Application number
EP09706204A
Other languages
German (de)
English (en)
Other versions
EP2247741A2 (fr
Inventor
Timothy Harris
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Helicos BioSciences Corp
Original Assignee
Helicos BioSciences Corp
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Priority claimed from US12/025,033 external-priority patent/US7767400B2/en
Application filed by Helicos BioSciences Corp filed Critical Helicos BioSciences Corp
Publication of EP2247741A2 publication Critical patent/EP2247741A2/fr
Publication of EP2247741A4 publication Critical patent/EP2247741A4/fr
Withdrawn legal-status Critical Current

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Organic Chemistry (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Immunology (AREA)
  • Biotechnology (AREA)
  • Molecular Biology (AREA)
  • Biophysics (AREA)
  • Analytical Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
EP09706204A 2008-02-03 2009-02-03 Eléments de lecture à extrémités appariées dans le séquençage par synthèse Withdrawn EP2247741A4 (fr)

Applications Claiming Priority (4)

Application Number Priority Date Filing Date Title
US12/025,033 US7767400B2 (en) 2008-02-03 2008-02-03 Paired-end reads in sequencing by synthesis
US4739708P 2008-04-23 2008-04-23
US9891008P 2008-09-22 2008-09-22
PCT/US2009/032970 WO2009097626A2 (fr) 2008-02-03 2009-02-03 Eléments de lecture à extrémités appariées dans le séquençage par synthèse

Publications (2)

Publication Number Publication Date
EP2247741A2 EP2247741A2 (fr) 2010-11-10
EP2247741A4 true EP2247741A4 (fr) 2011-02-23

Family

ID=40913521

Family Applications (1)

Application Number Title Priority Date Filing Date
EP09706204A Withdrawn EP2247741A4 (fr) 2008-02-03 2009-02-03 Eléments de lecture à extrémités appariées dans le séquençage par synthèse

Country Status (2)

Country Link
EP (1) EP2247741A4 (fr)
WO (1) WO2009097626A2 (fr)

Families Citing this family (15)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
AU2002227156A1 (en) 2000-12-01 2002-06-11 Visigen Biotechnologies, Inc. Enzymatic nucleic acid synthesis: compositions and methods for altering monomer incorporation fidelity
GB0514935D0 (en) 2005-07-20 2005-08-24 Solexa Ltd Methods for sequencing a polynucleotide template
WO2010127304A2 (fr) * 2009-05-01 2010-11-04 Illumina, Inc. Procédés de séquençage
EP2456892B1 (fr) 2009-07-24 2014-10-01 Illumina, Inc. Procédé de séquençage d'une matrice polynucléotidique
US10174368B2 (en) 2009-09-10 2019-01-08 Centrillion Technology Holdings Corporation Methods and systems for sequencing long nucleic acids
CN102858995B (zh) 2009-09-10 2016-10-26 森特瑞隆技术控股公司 靶向测序方法
EP2633069B1 (fr) * 2010-10-26 2015-07-01 Illumina, Inc. Procédés de séquençage
US20120252682A1 (en) 2011-04-01 2012-10-04 Maples Corporate Services Limited Methods and systems for sequencing nucleic acids
US10829816B2 (en) 2012-11-19 2020-11-10 Apton Biosystems, Inc. Methods of analyte detection
AU2013344340B2 (en) 2012-11-19 2019-09-19 Pacific Biosciences Of California, Inc. Digital analysis of molecular analytes using single molecule detection
CN105112516A (zh) * 2015-08-14 2015-12-02 深圳市瀚海基因生物科技有限公司 一种单分子靶向测序方法、装置、系统及应用
JP7305611B2 (ja) 2017-03-17 2023-07-10 アプトン バイオシステムズ インコーポレイテッド 配列決定および高分解能画像化の方法
WO2020018824A1 (fr) 2018-07-19 2020-01-23 Ultima Genomics, Inc. Procédés, systèmes et kits d'amplification et de séquençage clonale d'acide nucléique
JP2022501026A (ja) 2018-09-19 2022-01-06 アプトン バイオシステムズ インコーポレイテッド 高密度に詰め込まれた分析物の層および検出方法
EP4081653B1 (fr) * 2019-12-23 2024-07-03 Singular Genomics Systems, Inc. Méthodes de séquençage à longs fragments

Family Cites Families (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US7432048B2 (en) * 1996-11-29 2008-10-07 Third Wave Technologies, Inc. Reactions on a solid surface
US6951722B2 (en) * 1999-03-19 2005-10-04 Takara Bio Inc. Method for amplifying nucleic acid sequence
WO2001098537A2 (fr) * 2000-06-17 2001-12-27 Third Wave Technologies, Inc. Sites d'hybridation accessibles a l'acide nucleique
WO2003038558A2 (fr) * 2001-10-30 2003-05-08 Nanomics Biosystems Pty, Ltd. Dispositif et procedes de synthese dirigee de bibliotheques chimiques
US7575865B2 (en) * 2003-01-29 2009-08-18 454 Life Sciences Corporation Methods of amplifying and sequencing nucleic acids
CA2616433A1 (fr) * 2005-07-28 2007-02-01 Helicos Biosciences Corporation Sequencage monomoleculaire de bases consecutives

Non-Patent Citations (1)

* Cited by examiner, † Cited by third party
Title
ZAJAC ET AL: "Expression profiling of signature gene sets with trinucleotide threading", GENOMICS, ACADEMIC PRESS, SAN DIEGO, US, vol. 91, no. 2, 3 December 2007 (2007-12-03), pages 209 - 217, XP022426734, ISSN: 0888-7543, DOI: 10.1016/J.YGENO.2007.10.012 *

Also Published As

Publication number Publication date
EP2247741A2 (fr) 2010-11-10
WO2009097626A2 (fr) 2009-08-06
WO2009097626A3 (fr) 2009-09-24

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Legal Events

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