EP3355939A4 - Mikrobielle deadman- und passcode-not-ausschalter - Google Patents
Mikrobielle deadman- und passcode-not-ausschalter Download PDFInfo
- Publication number
- EP3355939A4 EP3355939A4 EP16852709.1A EP16852709A EP3355939A4 EP 3355939 A4 EP3355939 A4 EP 3355939A4 EP 16852709 A EP16852709 A EP 16852709A EP 3355939 A4 EP3355939 A4 EP 3355939A4
- Authority
- EP
- European Patent Office
- Prior art keywords
- deadman
- microbial
- circuit breakers
- passcode
- type
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Withdrawn
Links
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
- C12N15/635—Externally inducible repressor mediated regulation of gene expression, e.g. tetR inducible by tetracyline
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
- C12N15/70—Vectors or expression systems specially adapted for E. coli
-
- G—PHYSICS
- G06—COMPUTING OR CALCULATING; COUNTING
- G06N—COMPUTING ARRANGEMENTS BASED ON SPECIFIC COMPUTATIONAL MODELS
- G06N3/00—Computing arrangements based on biological models
- G06N3/12—Computing arrangements based on biological models using genetic models
- G06N3/123—DNA computing
Landscapes
- Engineering & Computer Science (AREA)
- Health & Medical Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Genetics & Genomics (AREA)
- Physics & Mathematics (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Biophysics (AREA)
- General Engineering & Computer Science (AREA)
- Biomedical Technology (AREA)
- Molecular Biology (AREA)
- Biotechnology (AREA)
- Wood Science & Technology (AREA)
- Zoology (AREA)
- Chemical & Material Sciences (AREA)
- Organic Chemistry (AREA)
- General Health & Medical Sciences (AREA)
- Bioinformatics & Computational Biology (AREA)
- Theoretical Computer Science (AREA)
- Evolutionary Biology (AREA)
- Biochemistry (AREA)
- Microbiology (AREA)
- Plant Pathology (AREA)
- Artificial Intelligence (AREA)
- Computational Linguistics (AREA)
- Data Mining & Analysis (AREA)
- Evolutionary Computation (AREA)
- Computing Systems (AREA)
- General Physics & Mathematics (AREA)
- Mathematical Physics (AREA)
- Software Systems (AREA)
- Micro-Organisms Or Cultivation Processes Thereof (AREA)
- Peptides Or Proteins (AREA)
Applications Claiming Priority (2)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US201562235186P | 2015-09-30 | 2015-09-30 | |
| PCT/US2016/054767 WO2017059245A2 (en) | 2015-09-30 | 2016-09-30 | Deadman and passcode microbial kill switches |
Publications (2)
| Publication Number | Publication Date |
|---|---|
| EP3355939A2 EP3355939A2 (de) | 2018-08-08 |
| EP3355939A4 true EP3355939A4 (de) | 2019-04-17 |
Family
ID=58427946
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| EP16852709.1A Withdrawn EP3355939A4 (de) | 2015-09-30 | 2016-09-30 | Mikrobielle deadman- und passcode-not-ausschalter |
Country Status (3)
| Country | Link |
|---|---|
| US (1) | US11459573B2 (de) |
| EP (1) | EP3355939A4 (de) |
| WO (1) | WO2017059245A2 (de) |
Families Citing this family (3)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| AU2018379996A1 (en) | 2017-12-05 | 2020-06-25 | BioPlx, Inc. | Methods and compositions to prevent microbial infection |
| US20220025364A1 (en) * | 2020-06-02 | 2022-01-27 | BioPlx, Inc. | Methods for stable genomic integration in recombinant microorganisms |
| WO2026085495A1 (en) | 2024-10-18 | 2026-04-23 | Generation Bio Co. | Synthetic partially single-stranded nucleic acid compositions and uses and methods therefor |
Citations (5)
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|---|---|---|---|---|
| WO2010075441A1 (en) * | 2008-12-22 | 2010-07-01 | Trustees Of Boston University | Modular nucleic acid-based circuits for counters, binary operations, memory, and logic |
| WO2011066541A2 (en) * | 2009-11-30 | 2011-06-03 | Trustees Of Boston University | Biological circuit chemotactic converters |
| WO2012170436A1 (en) * | 2011-06-06 | 2012-12-13 | The Regents Of The University Of California | Synthetic biology tools |
| WO2014027351A1 (en) * | 2012-08-16 | 2014-02-20 | Yeda Research And Development Co. Ltd. At The Weizmann Institute Of Science | A programmable nor-based device for transcription profile analyses |
| WO2014093852A1 (en) * | 2012-12-13 | 2014-06-19 | Massachusetts Institute Of Technology | Recombinase-based logic and memory systems |
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| US9115386B2 (en) | 2008-09-26 | 2015-08-25 | Children's Medical Center Corporation | Selective oxidation of 5-methylcytosine by TET-family proteins |
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| US9697460B2 (en) * | 2009-11-30 | 2017-07-04 | Trustees Of Boston University | Biological analog-to-digital and digital-to-analog converters |
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| US20120064521A1 (en) | 2010-09-09 | 2012-03-15 | James Yen | Detection of dna hydroxymethylation |
| EP2630257B1 (de) | 2010-10-22 | 2017-08-02 | Oslo Universitetssykehus HF | Verfahren und kits für den nachweis von 5-hydroxymethylcytosin |
| KR20130113476A (ko) | 2010-10-27 | 2013-10-15 | ?티백트 에이/에스 | 인터칼레이터 (intercalator) 분자를 포함하는 프로브에 의한 표적 DNA 및 RNA의 캡쳐 |
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| US9145580B2 (en) | 2011-04-02 | 2015-09-29 | New England Biolabs, Inc. | Methods and compositions for enriching either target polynucleotides or non-target polynucleotides from a mixture of target and non-target polynucleotides |
| EP2694686B2 (de) | 2011-04-06 | 2023-07-19 | The University of Chicago | Zusammensetzung und verfahren zur modifizierung von 5-methylcytosin (5mc) |
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| EP2723904A4 (de) | 2011-06-27 | 2015-03-04 | Flir Systems | Verfahren und zusammensetzungen zum trennen einer zielnukleinsäure von gemischten nukleinsäureproben |
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| WO2017176630A1 (en) | 2016-04-07 | 2017-10-12 | The Board Of Trustees Of The Leland Stanford Junior University | Noninvasive diagnostics by sequencing 5-hydroxymethylated cell-free dna |
| US20170298422A1 (en) | 2016-04-18 | 2017-10-19 | The Board Of Trustees Of The Leland Stanford Junior University | Simultaneous single-molecule epigenetic imaging of dna methylation and hydroxymethylation |
| US20200190581A1 (en) | 2017-01-04 | 2020-06-18 | The University Of Chicago | Methods for detecting cytosine modifications |
| CN117821565A (zh) | 2017-03-08 | 2024-04-05 | 芝加哥大学 | 高灵敏度dna甲基化分析方法 |
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-
2016
- 2016-09-30 EP EP16852709.1A patent/EP3355939A4/de not_active Withdrawn
- 2016-09-30 US US15/764,752 patent/US11459573B2/en active Active
- 2016-09-30 WO PCT/US2016/054767 patent/WO2017059245A2/en not_active Ceased
Patent Citations (5)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| WO2010075441A1 (en) * | 2008-12-22 | 2010-07-01 | Trustees Of Boston University | Modular nucleic acid-based circuits for counters, binary operations, memory, and logic |
| WO2011066541A2 (en) * | 2009-11-30 | 2011-06-03 | Trustees Of Boston University | Biological circuit chemotactic converters |
| WO2012170436A1 (en) * | 2011-06-06 | 2012-12-13 | The Regents Of The University Of California | Synthetic biology tools |
| WO2014027351A1 (en) * | 2012-08-16 | 2014-02-20 | Yeda Research And Development Co. Ltd. At The Weizmann Institute Of Science | A programmable nor-based device for transcription profile analyses |
| WO2014093852A1 (en) * | 2012-12-13 | 2014-06-19 | Massachusetts Institute Of Technology | Recombinase-based logic and memory systems |
Non-Patent Citations (8)
| Title |
|---|
| BRYNNE C STANTON ET AL: "Genomic mining of prokaryotic repressors for orthogonal logic gates", NATURE CHEMICAL BIOLOGY, PUBLISHED ONLINE, vol. 10, no. 2, 8 December 2013 (2013-12-08), Basingstoke, pages 99 - 105, XP055563873, ISSN: 1552-4450, DOI: 10.1038/nchembio.1411 * |
| BRYNNE C STANTON ET AL: "SUPPLEMENTARY INFORMATION FOR: Genomic mining of prokaryotic repressors for orthogonal logic gates", NATURE CHEMICAL BIOLOGY, PUBLISHED ONLINE, vol. 10, no. 2, 8 December 2013 (2013-12-08), Basingstoke, pages 99 - 105, XP055563876, ISSN: 1552-4450, DOI: 10.1038/nchembio.1411 * |
| CLEMENT T Y CHAN ET AL: "'Deadman' and 'Passcode' microbial kill switches for bacterial containment", NATURE CHEMICAL BIOLOGY, PUBLISHED ONLINE, vol. 12, no. 2, 7 December 2015 (2015-12-07), Basingstoke, pages 82 - 86, XP055563186, ISSN: 1552-4450, DOI: 10.1038/nchembio.1979 * |
| CLEMENT T Y CHAN ET AL: "SUPPLEMENTARY INFORMATION FOR: 'Deadman' and 'Passcode' microbial kill switches for bacterial containment", NATURE CHEMICAL BIOLOGY PUBLISHED ONLINE, vol. 12, no. 2, 7 December 2015 (2015-12-07), Basingstoke, pages 82 - 86, XP055563381, ISSN: 1552-4450, DOI: 10.1038/nchembio.1979 * |
| HASTY JEFF ET AL: "Engineered gene circuits", NATURE, MACMILLAN JOURNALS LTD, LONDON, vol. 420, no. 6912, 14 November 2002 (2002-11-14), pages 224 - 230, XP002575083, ISSN: 0028-0836, DOI: 10.1038/NATURE01257 * |
| JENNIFER A N BROPHY ET AL: "Principles of genetic circuit design", NATURE METHODS, vol. 11, no. 5, 29 April 2014 (2014-04-29), New York, pages 508 - 520, XP055256504, ISSN: 1548-7091, DOI: 10.1038/nmeth.2926 * |
| LEE JEONG WOOK ET AL: "Creating Single-Copy Genetic Circuits.", MOLECULAR CELL 21 07 2016, vol. 63, no. 2, 21 July 2016 (2016-07-21), pages 329 - 336, XP002789320, ISSN: 1097-4164 * |
| See also references of WO2017059245A2 * |
Also Published As
| Publication number | Publication date |
|---|---|
| WO2017059245A3 (en) | 2017-08-03 |
| EP3355939A2 (de) | 2018-08-08 |
| US20190040398A1 (en) | 2019-02-07 |
| US11459573B2 (en) | 2022-10-04 |
| WO2017059245A2 (en) | 2017-04-06 |
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