IL169535A - Method for solid phase sequencing of target - Google Patents

Method for solid phase sequencing of target

Info

Publication number
IL169535A
IL169535A IL169535A IL16953505A IL169535A IL 169535 A IL169535 A IL 169535A IL 169535 A IL169535 A IL 169535A IL 16953505 A IL16953505 A IL 16953505A IL 169535 A IL169535 A IL 169535A
Authority
IL
Israel
Prior art keywords
phosphate
nucleic acid
terminal
labeled
group
Prior art date
Application number
IL169535A
Other languages
English (en)
Other versions
IL169535A0 (en
Original Assignee
Ge Healthcare Bio Sciences
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Ge Healthcare Bio Sciences filed Critical Ge Healthcare Bio Sciences
Publication of IL169535A0 publication Critical patent/IL169535A0/en
Publication of IL169535A publication Critical patent/IL169535A/en

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844Nucleic acid amplification reactions
    • C12Q1/6858Allele-specific amplification
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869Methods for sequencing
    • C12Q1/6874Methods for sequencing involving nucleic acid arrays, e.g. sequencing by hybridisation

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Engineering & Computer Science (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Health & Medical Sciences (AREA)
  • Molecular Biology (AREA)
  • General Engineering & Computer Science (AREA)
  • Immunology (AREA)
  • Microbiology (AREA)
  • Biophysics (AREA)
  • Analytical Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Genetics & Genomics (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Biotechnology (AREA)
  • General Health & Medical Sciences (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
  • Investigating Or Analysing Materials By The Use Of Chemical Reactions (AREA)
IL169535A 2003-02-05 2005-07-05 Method for solid phase sequencing of target IL169535A (en)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US44519303P 2003-02-05 2003-02-05
PCT/US2004/003283 WO2004071155A2 (fr) 2003-02-05 2004-02-05 Sequençage en phase solide

Publications (2)

Publication Number Publication Date
IL169535A0 IL169535A0 (en) 2007-07-04
IL169535A true IL169535A (en) 2011-07-31

Family

ID=32869321

Family Applications (1)

Application Number Title Priority Date Filing Date
IL169535A IL169535A (en) 2003-02-05 2005-07-05 Method for solid phase sequencing of target

Country Status (8)

Country Link
US (1) US20040152119A1 (fr)
EP (1) EP1597602A4 (fr)
JP (1) JP4896707B2 (fr)
CN (1) CN101384729B (fr)
AU (1) AU2004211920B2 (fr)
CA (1) CA2513690A1 (fr)
IL (1) IL169535A (fr)
WO (1) WO2004071155A2 (fr)

Families Citing this family (66)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6936702B2 (en) * 2000-06-07 2005-08-30 Li-Cor, Inc. Charge-switch nucleotides
US7170050B2 (en) 2004-09-17 2007-01-30 Pacific Biosciences Of California, Inc. Apparatus and methods for optical analysis of molecules
US7405281B2 (en) 2005-09-29 2008-07-29 Pacific Biosciences Of California, Inc. Fluorescent nucleotide analogs and uses therefor
WO2007146158A1 (fr) 2006-06-07 2007-12-21 The Trustees Of Columbia University In The City Of New York Séquençage d'adn par nanopore au moyen de nucléotides modifiés
US8551704B2 (en) 2007-02-16 2013-10-08 Pacific Biosciences Of California, Inc. Controllable strand scission of mini circle DNA
US20080220537A1 (en) * 2007-03-07 2008-09-11 Pacific Biosciences Of California, Inc. Substrates and methods for selective immobilization of active molecules
JP2010534474A (ja) 2007-07-26 2010-11-11 パシフィック バイオサイエンシーズ オブ カリフォルニア, インコーポレイテッド 分子冗長配列決定
US8003330B2 (en) * 2007-09-28 2011-08-23 Pacific Biosciences Of California, Inc. Error-free amplification of DNA for clonal sequencing
US7960116B2 (en) 2007-09-28 2011-06-14 Pacific Biosciences Of California, Inc. Nucleic acid sequencing methods and systems
CA2711560A1 (fr) 2008-01-10 2009-07-16 Pacific Biosciences Of California, Inc. Procedes et systemes d'analyse de reactions fluorescentes a excitation modulee
AU2009215193A1 (en) * 2008-02-12 2009-08-20 Pacific Biosciences Of California, Inc. Compositions and methods for use in analytical reactions
US8628940B2 (en) 2008-09-24 2014-01-14 Pacific Biosciences Of California, Inc. Intermittent detection during analytical reactions
WO2009120374A2 (fr) 2008-03-28 2009-10-01 Pacific Biosciences Of California, Inc. Procédés et compositions pour la préparation d’échantillon d’acide nucléique
EP4230747A3 (fr) * 2008-03-28 2023-11-15 Pacific Biosciences Of California, Inc. Compositions et procédés de séquençage d'acide nucléique
US20090247426A1 (en) * 2008-03-31 2009-10-01 Pacific Biosciences Of California, Inc. Focused library generation
US8198023B2 (en) * 2008-08-05 2012-06-12 Pacific Biosciences Of California, Inc. Prevention and alleviation of steric hindrance during single molecule nucleic acid synthesis by a polymerase
US20100227327A1 (en) * 2008-08-08 2010-09-09 Xiaoliang Sunney Xie Methods and compositions for continuous single-molecule nucleic acid sequencing by synthesis with fluorogenic nucleotides
US20100036110A1 (en) * 2008-08-08 2010-02-11 Xiaoliang Sunney Xie Methods and compositions for continuous single-molecule nucleic acid sequencing by synthesis with fluorogenic nucleotides
US8795961B2 (en) * 2008-09-05 2014-08-05 Pacific Biosciences Of California, Inc. Preparations, compositions, and methods for nucleic acid sequencing
US8921046B2 (en) 2008-09-19 2014-12-30 Pacific Biosciences Of California, Inc. Nucleic acid sequence analysis
US8481264B2 (en) * 2008-09-19 2013-07-09 Pacific Biosciences Of California, Inc. Immobilized nucleic acid complexes for sequence analysis
WO2010036287A1 (fr) * 2008-09-24 2010-04-01 Pacific Biosciences Of California, Inc. Détection intermittente durant des réactions analytiques
US8383369B2 (en) * 2008-09-24 2013-02-26 Pacific Biosciences Of California, Inc. Intermittent detection during analytical reactions
US8252910B2 (en) * 2008-11-19 2012-08-28 Pacific Biosciences Of California, Inc. Modular nucleotide compositions and uses therefor
US8370079B2 (en) 2008-11-20 2013-02-05 Pacific Biosciences Of California, Inc. Algorithms for sequence determination
AU2009325069B2 (en) * 2008-12-11 2015-03-19 Pacific Biosciences Of California, Inc. Classification of nucleic acid templates
US9175338B2 (en) 2008-12-11 2015-11-03 Pacific Biosciences Of California, Inc. Methods for identifying nucleic acid modifications
US12527665B2 (en) 2008-12-11 2026-01-20 Pacific Biosciences Of California, Inc. Methods for identifying modified bases in nucleic acid templates
US9778188B2 (en) 2009-03-11 2017-10-03 Industrial Technology Research Institute Apparatus and method for detection and discrimination molecular object
WO2010111674A2 (fr) 2009-03-27 2010-09-30 Life Technologies Corporation Procédés et appareil de séquençage de molécules uniques utilisant la détection par transfert d'énergie
EP2425023B1 (fr) 2009-04-27 2015-12-23 Pacific Biosciences of California, Inc. Procédés et systèmes de séquençage en temps réel
US8518643B2 (en) * 2010-02-04 2013-08-27 Pacific Biosciences Of California, Inc. Method to improve single molecule analyses
US9482615B2 (en) 2010-03-15 2016-11-01 Industrial Technology Research Institute Single-molecule detection system and methods
US9670243B2 (en) * 2010-06-02 2017-06-06 Industrial Technology Research Institute Compositions and methods for sequencing nucleic acids
US8865078B2 (en) 2010-06-11 2014-10-21 Industrial Technology Research Institute Apparatus for single-molecule detection
US8465922B2 (en) 2010-08-26 2013-06-18 Pacific Biosciences Of California, Inc. Methods and systems for monitoring reactions
EP2616555B1 (fr) 2010-09-16 2017-11-08 Gen-Probe Incorporated Sondes de capture immobilisables par l'intermédiaire d'une queue nucléotidique l
US9255293B2 (en) 2010-11-01 2016-02-09 Gen-Probe Incorporated Integrated capture and amplification of target nucleic acid for sequencing
WO2012083249A2 (fr) * 2010-12-17 2012-06-21 The Trustees Of Columbia University In The City Of New York Séquençage d'adn par une synthèse utilisant des nucléotides modifiés et une détection par nanopores
GB2500360B (en) 2010-12-22 2019-10-23 Genia Tech Inc Nanopore-based single DNA molecule characterization, identification and isolation using speed bumps
EP2689028B1 (fr) 2011-03-23 2017-08-30 Pacific Biosciences Of California, Inc. Isolement de complexes polymérase-acide nucléique et charge sur des substrats
EP2694686B2 (fr) 2011-04-06 2023-07-19 The University of Chicago Composition et procédés se rapportant à la modification de la 5-méthylcytosine (5-mc)
WO2013036668A1 (fr) 2011-09-06 2013-03-14 Gen-Probe Incorporated Gabarits mis sous forme circulaire pour séquençage
EP3620533B1 (fr) 2011-09-06 2023-01-18 Gen-Probe Incorporated Structures d'acide nucléique fermée
CN103020490B (zh) * 2011-09-26 2015-11-25 深圳华大基因科技服务有限公司 目标区域测序中质控位点选取方法及装置
US9267917B2 (en) 2011-11-04 2016-02-23 Pacific Biosciences Of California, Inc. Nanopores in zero mode waveguides
US9238836B2 (en) 2012-03-30 2016-01-19 Pacific Biosciences Of California, Inc. Methods and compositions for sequencing modified nucleic acids
US10655165B2 (en) 2012-02-01 2020-05-19 Gen-Probe Incorporated Asymmetric hairpin target capture oligomers
WO2013154999A2 (fr) 2012-04-09 2013-10-17 The Trustees Of Columbia University In The City Of New York Procédé de préparation de nanopore, et utilisations de celui-ci
US9175348B2 (en) 2012-04-24 2015-11-03 Pacific Biosciences Of California, Inc. Identification of 5-methyl-C in nucleic acid templates
WO2013188841A1 (fr) 2012-06-15 2013-12-19 Genia Technologies, Inc. Configuration de puce et séquençage d'acide nucléique à haute précision
EP3674412A1 (fr) 2012-06-20 2020-07-01 The Trustees of Columbia University in the City of New York Séquençage d'acide nucléique par détection de nanopores de molécules d'étiquettes
US9605309B2 (en) 2012-11-09 2017-03-28 Genia Technologies, Inc. Nucleic acid sequencing using tags
WO2014144883A1 (fr) 2013-03-15 2014-09-18 The Trustees Of Columbia University In The City Of New York Molecules marquees par des amas de raman destinees a l'imagerie biologique
JP6461943B2 (ja) 2013-10-23 2019-01-30 ジェニア・テクノロジーズ・インコーポレイテッド ナノポアを備えた高速分子検知
US9322062B2 (en) 2013-10-23 2016-04-26 Genia Technologies, Inc. Process for biosensor well formation
US9416414B2 (en) 2013-10-24 2016-08-16 Pacific Biosciences Of California, Inc. Delaying real-time sequencing
MA39774A (fr) 2014-03-24 2021-05-12 Roche Sequencing Solutions Inc Procédés chimiques pour produire des nucléotides étiquetés
US10093989B2 (en) 2014-10-20 2018-10-09 Gen-Probe Incorporated Red blood cell lysis solution
US10190162B2 (en) * 2014-10-23 2019-01-29 Complete Genomics, Inc. Signal confinement sequencing (SCS) and nucleotide analogues for signal confinement sequencing
US10302972B2 (en) 2015-01-23 2019-05-28 Pacific Biosciences Of California, Inc. Waveguide transmission
CN104910229B (zh) * 2015-04-30 2019-11-12 赛纳生物科技(北京)有限公司 多聚磷酸末端荧光标记核苷酸及其应用
CN104844674B (zh) * 2015-04-30 2019-11-12 赛纳生物科技(北京)有限公司 新型聚合酶底物:荧光可产生多聚磷酸末端标记核苷酸及其应用
CN116218970A (zh) * 2015-11-19 2023-06-06 赛纳生物科技(北京)有限公司 用于获得和校正目标多核苷酸的序列信息的方法
EP3448998B1 (fr) 2016-04-27 2020-06-03 Gen-Probe Incorporated Réactif de lyse de cellules sanguines
CN112812141B (zh) * 2019-11-18 2024-10-11 华东理工大学 3位氟甲基取代的香豆素类化合物的制备方法及荧光探针

Family Cites Families (18)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5112960A (en) * 1989-07-17 1992-05-12 Bronstein Irena Y Chemiluminescent 3-(substituted adamant-2'-ylidene) 1,2-dioxetanes
WO1993015228A1 (fr) * 1992-01-29 1993-08-05 Hitachi Chemical Co., Ltd. Support d'immobilisation de polynucleotide
DE69631988T2 (de) * 1995-01-12 2005-02-10 Toyo Boseki K.K. Neue alkalische Phosphatase, deren Herstellung und Verwendung
US5683875A (en) * 1995-05-04 1997-11-04 Hewlett-Packard Company Method for detecting a target nucleic acid analyte in a sample
JP4540754B2 (ja) * 1996-06-04 2010-09-08 ユニバーシティ オブ ユタ リサーチ ファウンデーション Pcr中のハイブリダイゼーションのモニタリング
US6110630A (en) * 1998-06-18 2000-08-29 Beckman Coulter, Inc. Efficient activated cyanine dyes
WO2000036152A1 (fr) * 1998-12-14 2000-06-22 Li-Cor, Inc. Systeme et procede de sequençage d'acides nucleiques mono-moleculaires par synthese de polymerase
US6399335B1 (en) * 1999-11-16 2002-06-04 Advanced Research And Technology Institute, Inc. γ-phosphoester nucleoside triphosphates
WO2001094609A1 (fr) * 2000-06-07 2001-12-13 Li-Cor, Inc. Nucleotides a commutation de charges
JP2004523243A (ja) * 2001-03-12 2004-08-05 カリフォルニア インスティチュート オブ テクノロジー 非同期性塩基伸長によってポリヌクレオチド配列を分析するための方法および装置
US7052839B2 (en) * 2001-08-29 2006-05-30 Amersham Biosciences Corp Terminal-phosphate-labeled nucleotides and methods of use
US7033762B2 (en) * 2001-08-29 2006-04-25 Amersham Biosciences Corp Single nucleotide amplification and detection by polymerase
WO2003020734A2 (fr) * 2001-08-29 2003-03-13 Amersham Biosciences Corp Polyphosphates de nucleoside marques
US7256019B2 (en) * 2001-08-29 2007-08-14 Ge Healthcare Bio-Sciences Corp. Terminal phosphate blocked nucleoside polyphosphates
US7244566B2 (en) * 2001-08-29 2007-07-17 Ge Healthcare Bio-Sciences Corp. Analyte detection
US7223541B2 (en) * 2001-08-29 2007-05-29 Ge Healthcare Bio-Sciences Corp. Terminal-phosphate-labeled nucleotides and methods of use
EP1590479B1 (fr) * 2003-02-05 2010-11-24 GE Healthcare Bio-Sciences Corp. Amplification d'acides nucleiques
US7264934B2 (en) * 2004-06-10 2007-09-04 Ge Healthcare Bio-Sciences Corp. Rapid parallel nucleic acid analysis

Also Published As

Publication number Publication date
EP1597602A4 (fr) 2009-07-22
AU2004211920A1 (en) 2004-08-26
JP2007524359A (ja) 2007-08-30
WO2004071155A2 (fr) 2004-08-26
CA2513690A1 (fr) 2004-08-26
WO2004071155A3 (fr) 2008-08-21
JP4896707B2 (ja) 2012-03-14
CN101384729A (zh) 2009-03-11
IL169535A0 (en) 2007-07-04
US20040152119A1 (en) 2004-08-05
AU2004211920B2 (en) 2009-05-14
EP1597602A2 (fr) 2005-11-23
CN101384729B (zh) 2014-09-10

Similar Documents

Publication Publication Date Title
AU2004211920B2 (en) Solid phase sequencing
CA2774344C (fr) Nucleotides marques sur le phosphate de terminaison et methodes d'utilisation
EP1421213B1 (fr) Polyphosphates de nucleoside marques
JP4360904B2 (ja) 単一ヌクレオチドの増幅およびポリメラーゼによる検出
CA2513672C (fr) Nucleotides marques sur le phosphate de terminaison et methodes d'utilisation
AU2002324825A1 (en) Terminal-phosphate-labeled nucleotides and methods of use
AU2002324827A1 (en) Labeled nucleoside polyphosphates
AU2002324826A1 (en) Single nucleotide amplification and detection by polymerase
EP1546354B1 (fr) Detection d'analytes

Legal Events

Date Code Title Description
FF Patent granted
KB Patent renewed
KB Patent renewed
KB Patent renewed