IS5929A - Methods for using synchronous gene sets to improve sensitivity and classification of gene expression patterns - Google Patents

Methods for using synchronous gene sets to improve sensitivity and classification of gene expression patterns

Info

Publication number
IS5929A
IS5929A IS5929A IS5929A IS5929A IS 5929 A IS5929 A IS 5929A IS 5929 A IS5929 A IS 5929A IS 5929 A IS5929 A IS 5929A IS 5929 A IS5929 A IS 5929A
Authority
IS
Iceland
Prior art keywords
classification
methods
synchronous
expression patterns
gene
Prior art date
Application number
IS5929A
Other languages
Icelandic (is)
Inventor
H. Friend Stephen
Stoughton Roland
He Yudong
Original Assignee
Rosetta Inpharmatics Inc.
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Priority claimed from US09/179,569 external-priority patent/US6203987B1/en
Priority claimed from US09/220,275 external-priority patent/US6950752B1/en
Application filed by Rosetta Inpharmatics Inc. filed Critical Rosetta Inpharmatics Inc.
Publication of IS5929A publication Critical patent/IS5929A/en

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B40/00ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
    • G16B40/30Unsupervised data analysis
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/68Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
    • G01N33/6803General methods of protein analysis not limited to specific proteins or families of proteins
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6809Methods for determination or identification of nucleic acids involving differential detection
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6834Enzymatic or biochemical coupling of nucleic acids to a solid phase
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B25/00ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression
    • G16B25/10Gene or protein expression profiling; Expression-ratio estimation or normalisation
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B40/00ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B25/00ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Physics & Mathematics (AREA)
  • Chemical & Material Sciences (AREA)
  • Biophysics (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Biotechnology (AREA)
  • Medical Informatics (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Molecular Biology (AREA)
  • Organic Chemistry (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Theoretical Computer Science (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Data Mining & Analysis (AREA)
  • Evolutionary Biology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Immunology (AREA)
  • Analytical Chemistry (AREA)
  • Software Systems (AREA)
  • Databases & Information Systems (AREA)
  • Epidemiology (AREA)
  • Evolutionary Computation (AREA)
  • Computer Vision & Pattern Recognition (AREA)
  • Public Health (AREA)
  • Biochemistry (AREA)
  • Bioethics (AREA)
  • Artificial Intelligence (AREA)
  • Microbiology (AREA)
  • General Engineering & Computer Science (AREA)
  • Biomedical Technology (AREA)
  • Hematology (AREA)
  • Urology & Nephrology (AREA)
  • Cell Biology (AREA)
  • Food Science & Technology (AREA)
  • Medicinal Chemistry (AREA)
IS5929A 1998-10-27 2001-04-27 Methods for using synchronous gene sets to improve sensitivity and classification of gene expression patterns IS5929A (en)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US09/179,569 US6203987B1 (en) 1998-10-27 1998-10-27 Methods for using co-regulated genesets to enhance detection and classification of gene expression patterns
US09/220,275 US6950752B1 (en) 1998-10-27 1998-12-23 Methods for removing artifact from biological profiles
PCT/US1999/025025 WO2000024936A1 (en) 1998-10-27 1999-10-27 Methods for using co-regulated genesets to enhance detection and classification of gene expression patterns

Publications (1)

Publication Number Publication Date
IS5929A true IS5929A (en) 2001-04-27

Family

ID=26875445

Family Applications (1)

Application Number Title Priority Date Filing Date
IS5929A IS5929A (en) 1998-10-27 2001-04-27 Methods for using synchronous gene sets to improve sensitivity and classification of gene expression patterns

Country Status (11)

Country Link
EP (1) EP1124992A4 (en)
JP (1) JP2002528095A (en)
KR (1) KR20010081098A (en)
AU (1) AU773456B2 (en)
BR (1) BR9914913A (en)
CA (1) CA2348837A1 (en)
HU (1) HUP0104050A2 (en)
IL (1) IL142840A0 (en)
IS (1) IS5929A (en)
NO (1) NO20012036L (en)
PL (1) PL347495A1 (en)

Families Citing this family (9)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP1964037A4 (en) 2005-12-16 2012-04-25 Nextbio System and method for scientific information knowledge management
US9183349B2 (en) 2005-12-16 2015-11-10 Nextbio Sequence-centric scientific information management
WO2009111581A1 (en) 2008-03-04 2009-09-11 Nextbio Categorization and filtering of scientific data
CA2787218A1 (en) * 2009-01-19 2010-07-22 Sistemic Scotland Limited Methods employing non-coding rna expression assays
JP5133368B2 (en) * 2010-05-30 2013-01-30 株式会社 ワールドフュージョン Expression data prediction system
WO2015198620A1 (en) * 2014-06-23 2015-12-30 オリンパス株式会社 Tissue mapping method
CN111507649B (en) * 2020-06-30 2020-11-27 上海竞动科技有限公司 A blockchain-based financial big data risk control platform
CN116912160A (en) * 2022-04-19 2023-10-20 佳能医疗系统株式会社 Medical image processing device, degree of change calculation method and non-volatile storage medium
CN117933579B (en) * 2024-03-25 2024-06-25 中国农业科学院草原研究所 Efficient artificial grassland comprehensive management method

Also Published As

Publication number Publication date
AU1451700A (en) 2000-05-15
AU773456B2 (en) 2004-05-27
BR9914913A (en) 2001-10-16
PL347495A1 (en) 2002-04-08
HUP0104050A2 (en) 2002-03-28
EP1124992A4 (en) 2006-09-06
IL142840A0 (en) 2002-03-10
JP2002528095A (en) 2002-09-03
KR20010081098A (en) 2001-08-27
EP1124992A1 (en) 2001-08-22
NO20012036L (en) 2001-06-25
CA2348837A1 (en) 2000-05-04
NO20012036D0 (en) 2001-04-25

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