MX2017015224A - Descubrimiento de estructura demografica a partir de patrones de identidad por ascendencia. - Google Patents

Descubrimiento de estructura demografica a partir de patrones de identidad por ascendencia.

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Publication number
MX2017015224A
MX2017015224A MX2017015224A MX2017015224A MX2017015224A MX 2017015224 A MX2017015224 A MX 2017015224A MX 2017015224 A MX2017015224 A MX 2017015224A MX 2017015224 A MX2017015224 A MX 2017015224A MX 2017015224 A MX2017015224 A MX 2017015224A
Authority
MX
Mexico
Prior art keywords
communities
descent
identity
population structure
patterns
Prior art date
Application number
MX2017015224A
Other languages
English (en)
Inventor
Han Eunjung
Curtis Ross
CARBONETTO Peter
Original Assignee
Ancestry Com Dna Llc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Ancestry Com Dna Llc filed Critical Ancestry Com Dna Llc
Publication of MX2017015224A publication Critical patent/MX2017015224A/es

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    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B10/00—ICT specially adapted for evolutionary bioinformatics, e.g. phylogenetic tree construction or analysis
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6888—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
    • G—PHYSICS
    • G06—COMPUTING OR CALCULATING; COUNTING
    • G06N—COMPUTING ARRANGEMENTS BASED ON SPECIFIC COMPUTATIONAL MODELS
    • G06N20/00—Machine learning
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/20—Allele or variant detection, e.g. single nucleotide polymorphism [SNP] detection
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/40—Population genetics; Linkage disequilibrium
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B35/00—ICT specially adapted for in silico combinatorial libraries of nucleic acids, proteins or peptides
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
    • G16B40/20—Supervised data analysis
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16C—COMPUTATIONAL CHEMISTRY; CHEMOINFORMATICS; COMPUTATIONAL MATERIALS SCIENCE
    • G16C20/00—Chemoinformatics, i.e. ICT specially adapted for the handling of physicochemical or structural data of chemical particles, elements, compounds or mixtures
    • G16C20/60—In silico combinatorial chemistry
    • G—PHYSICS
    • G06—COMPUTING OR CALCULATING; COUNTING
    • G06N—COMPUTING ARRANGEMENTS BASED ON SPECIFIC COMPUTATIONAL MODELS
    • G06N5/00—Computing arrangements using knowledge-based models
    • G06N5/01—Dynamic search techniques; Heuristics; Dynamic trees; Branch-and-bound
    • Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y02—TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
    • Y02A—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
    • Y02A90/00—Technologies having an indirect contribution to adaptation to climate change
    • Y02A90/10—Information and communication technologies [ICT] supporting adaptation to climate change, e.g. for weather forecasting or climate simulation

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  • Life Sciences & Earth Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Health & Medical Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Chemical & Material Sciences (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Medical Informatics (AREA)
  • General Health & Medical Sciences (AREA)
  • Theoretical Computer Science (AREA)
  • Biophysics (AREA)
  • Biotechnology (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Analytical Chemistry (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Evolutionary Biology (AREA)
  • Genetics & Genomics (AREA)
  • Molecular Biology (AREA)
  • Organic Chemistry (AREA)
  • Data Mining & Analysis (AREA)
  • Software Systems (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Evolutionary Computation (AREA)
  • Physiology (AREA)
  • Artificial Intelligence (AREA)
  • Computer Vision & Pattern Recognition (AREA)
  • Biochemistry (AREA)
  • General Engineering & Computer Science (AREA)
  • Public Health (AREA)
  • Databases & Information Systems (AREA)
  • Bioethics (AREA)
  • Epidemiology (AREA)
  • Microbiology (AREA)
  • Immunology (AREA)
  • Animal Behavior & Ethology (AREA)
  • Computing Systems (AREA)
  • Ecology (AREA)
  • Medicinal Chemistry (AREA)
  • Crystallography & Structural Chemistry (AREA)

Abstract

Se describen técnicas para determinar la estructura demográfica a partir de la identidad por ascendencia (IBD) de individuos. Se pueden utilizar las técnicas para predecir que un individuo pertenece a cero, una o más de varias comunidades identificadas dentro de una red de IBD. Se pueden utilizar los datos adicionales para anotar las comunidades con el lugar de nacimiento, apellido, e información de grupo étnico. A su vez, estos datos se pueden utilizar para proporcionar a un individuo una predicción de la membresía a cero, una o más comunidades, acompañada por un resumen de la información anotada para aquellas comunidades.
MX2017015224A 2015-05-30 2016-05-28 Descubrimiento de estructura demografica a partir de patrones de identidad por ascendencia. MX2017015224A (es)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US201562168808P 2015-05-30 2015-05-30
PCT/IB2016/053166 WO2016193891A1 (en) 2015-05-30 2016-05-28 Discovering population structure from patterns of identity-by-descent

Publications (1)

Publication Number Publication Date
MX2017015224A true MX2017015224A (es) 2018-02-19

Family

ID=57398757

Family Applications (1)

Application Number Title Priority Date Filing Date
MX2017015224A MX2017015224A (es) 2015-05-30 2016-05-28 Descubrimiento de estructura demografica a partir de patrones de identidad por ascendencia.

Country Status (7)

Country Link
US (4) US10223498B2 (es)
EP (1) EP3304385B1 (es)
AU (1) AU2016272732B2 (es)
CA (1) CA2987015A1 (es)
MX (1) MX2017015224A (es)
NZ (1) NZ737553A (es)
WO (1) WO2016193891A1 (es)

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WO2010077336A1 (en) 2008-12-31 2010-07-08 23Andme, Inc. Finding relatives in a database
US8990250B1 (en) 2011-10-11 2015-03-24 23Andme, Inc. Cohort selection with privacy protection
US10437858B2 (en) 2011-11-23 2019-10-08 23Andme, Inc. Database and data processing system for use with a network-based personal genetics services platform
US10025877B2 (en) 2012-06-06 2018-07-17 23Andme, Inc. Determining family connections of individuals in a database
US9836576B1 (en) 2012-11-08 2017-12-05 23Andme, Inc. Phasing of unphased genotype data
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WO2016193891A1 (en) * 2015-05-30 2016-12-08 Ancestry.Com Dna, Llc Discovering population structure from patterns of identity-by-descent
MX2018000622A (es) * 2015-07-13 2018-07-06 Ancestry Com Dna Llc Sistema de determinacion de etnicidad genetica local.
CN106682848A (zh) * 2017-01-18 2017-05-17 浙江工业大学 一种面向多配送点的配送仓库选址方法及装置
US10622095B2 (en) * 2017-07-21 2020-04-14 Helix OpCo, LLC Genomic services platform supporting multiple application providers
JP2021521511A (ja) * 2018-04-05 2021-08-26 アンセストリー ドットコム ディーエヌエー リミテッド ライアビリティ カンパニー 降下による同一性ネットワークおよび遺伝子変異体発生におけるコミュニティ割り当て
US11211149B2 (en) 2018-06-19 2021-12-28 Ancestry.Com Dna, Llc Filtering genetic networks to discover populations of interest
US10896741B2 (en) 2018-08-17 2021-01-19 Ancestry.Com Dna, Llc Prediction of phenotypes using recommender systems
WO2020053789A1 (en) 2018-09-11 2020-03-19 Ancestry.Com Dna, Llc Global ancestry determination system
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EP3874510A4 (en) * 2018-10-31 2022-08-03 Ancestry.com DNA, LLC ESTIMATION OF PHENOTYPES USING DNA, PEDIGREE AND HISTORICAL DATA
AU2020227306A1 (en) 2019-02-27 2021-10-07 Ancestry.Com Dna, Llc Graphical user interface displaying relatedness based on shared DNA
US20210020266A1 (en) 2019-07-19 2021-01-21 23Andme, Inc. Phase-aware determination of identity-by-descent dna segments
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Also Published As

Publication number Publication date
CA2987015A1 (en) 2016-12-08
EP3304385A4 (en) 2018-12-12
AU2016272732A1 (en) 2017-12-07
US10223498B2 (en) 2019-03-05
EP3304385A1 (en) 2018-04-11
US11538551B2 (en) 2022-12-27
WO2016193891A1 (en) 2016-12-08
EP3304385C0 (en) 2024-08-14
EP3304385B1 (en) 2024-08-14
US20190147973A1 (en) 2019-05-16
AU2016272732B2 (en) 2021-02-25
NZ737553A (es) 2017-11-24
US20170242957A1 (en) 2017-08-24
US20230102326A1 (en) 2023-03-30
US9940433B2 (en) 2018-04-10
US20160350479A1 (en) 2016-12-01

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