PL2018441T3 - LABELED MICROORGANISMS AND LABELING METHODS - Google Patents
LABELED MICROORGANISMS AND LABELING METHODSInfo
- Publication number
- PL2018441T3 PL2018441T3 PL07777180T PL07777180T PL2018441T3 PL 2018441 T3 PL2018441 T3 PL 2018441T3 PL 07777180 T PL07777180 T PL 07777180T PL 07777180 T PL07777180 T PL 07777180T PL 2018441 T3 PL2018441 T3 PL 2018441T3
- Authority
- PL
- Poland
- Prior art keywords
- bacteria
- microorganisms
- members
- tagged
- preferred embodiments
- Prior art date
Links
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
- C12Q1/6888—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
- C12Q1/689—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms for bacteria
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/70—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving virus or bacteriophage
Landscapes
- Chemical & Material Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Analytical Chemistry (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Organic Chemistry (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Health & Medical Sciences (AREA)
- Engineering & Computer Science (AREA)
- Microbiology (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Molecular Biology (AREA)
- Biotechnology (AREA)
- Biophysics (AREA)
- Physics & Mathematics (AREA)
- Biochemistry (AREA)
- Immunology (AREA)
- General Engineering & Computer Science (AREA)
- General Health & Medical Sciences (AREA)
- Genetics & Genomics (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Micro-Organisms Or Cultivation Processes Thereof (AREA)
- Medicines Containing Material From Animals Or Micro-Organisms (AREA)
Abstract
The present invention provides methods for tagging and/or identifying microorganisms. In some preferred embodiments, the microorganisms are bacteria. In some particularly preferred embodiments, the bacteria are members of the genus Streptococcus, while in other embodiments, the bacteria are members of other genera. The present invention also provides microorganisms tagged using the methods set forth herein. In some preferred embodiments, the tagged microorganisms are bacteria. In some particularly preferred embodiments, the tagged bacteria are members of the genus Streptococcus, while in other embodiments, the tagged bacteria are members of other genera.
Applications Claiming Priority (4)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US74768206P | 2006-05-19 | 2006-05-19 | |
| US90472107P | 2007-03-02 | 2007-03-02 | |
| EP07777180.6A EP2018441B2 (en) | 2006-05-19 | 2007-05-18 | Tagged microorganisms and methods of tagging |
| PCT/US2007/012039 WO2007136815A2 (en) | 2006-05-19 | 2007-05-18 | Tagged microorganisms and methods of tagging |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| PL2018441T3 true PL2018441T3 (en) | 2012-03-30 |
Family
ID=38669481
Family Applications (2)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| PL07777180T PL2018441T3 (en) | 2006-05-19 | 2007-05-18 | LABELED MICROORGANISMS AND LABELING METHODS |
| PL11161778T PL2426220T3 (en) | 2006-05-19 | 2007-05-18 | Tagged microorganisms and methods of tagging |
Family Applications After (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| PL11161778T PL2426220T3 (en) | 2006-05-19 | 2007-05-18 | Tagged microorganisms and methods of tagging |
Country Status (7)
| Country | Link |
|---|---|
| US (2) | US9816140B2 (en) |
| EP (2) | EP2018441B2 (en) |
| AT (1) | ATE530669T1 (en) |
| DK (2) | DK2426220T3 (en) |
| ES (2) | ES2373586T3 (en) |
| PL (2) | PL2018441T3 (en) |
| WO (1) | WO2007136815A2 (en) |
Families Citing this family (67)
| Publication number | Priority date | Publication date | Assignee | Title |
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| ES2719789T3 (en) * | 2007-03-02 | 2019-07-16 | Dupont Nutrition Biosci Aps | Crops with improved phage resistance |
| FR2925918A1 (en) * | 2007-12-28 | 2009-07-03 | Pasteur Institut | Typing or subtyping Salmonella bacteria comprises determining the variable sequence composition of a nucleic acid fragment amplified from the CRISPR1 and/or CRISPR2 locus |
| WO2010011961A2 (en) * | 2008-07-25 | 2010-01-28 | University Of Georgia Research Foundation, Inc. | Prokaryotic rnai-like system and methods of use |
| US9404098B2 (en) * | 2008-11-06 | 2016-08-02 | University Of Georgia Research Foundation, Inc. | Method for cleaving a target RNA using a Cas6 polypeptide |
| US10662227B2 (en) | 2008-11-07 | 2020-05-26 | Dupont Nutrition Biosciences Aps | Bifidobacteria CRISPR sequences |
| EP2367938B1 (en) * | 2008-12-12 | 2014-06-11 | DuPont Nutrition Biosciences ApS | Genetic cluster of strains of streptococcus thermophilus having unique rheological properties for dairy fermentation |
| WO2010075424A2 (en) * | 2008-12-22 | 2010-07-01 | The Regents Of University Of California | Compositions and methods for downregulating prokaryotic genes |
| EP2228436B1 (en) | 2009-03-06 | 2016-01-13 | DuPont Nutrition Biosciences ApS | Centrifugation and filtration methods for concentrating microorganisms |
| US20110269119A1 (en) | 2009-10-30 | 2011-11-03 | Synthetic Genomics, Inc. | Encoding text into nucleic acid sequences |
| BR112012028805A2 (en) | 2010-05-10 | 2019-09-24 | The Regents Of The Univ Of California E Nereus Pharmaceuticals Inc | endoribonuclease compositions and methods of use thereof. |
| BR112013009583A2 (en) | 2010-10-20 | 2017-05-30 | Dupont Nutrition Biosci Aps | nucleic acid, vector, host cell, methods of preparing a bacterial lineage variant for typing, marking, generating and controlling bacterial populations, variant bacterial cell line and variant, kit, use of a nucleic acid, cell culture, product, product preparation process, phage mutants and phage escape mutant |
| EP2734621B1 (en) | 2011-07-22 | 2019-09-04 | President and Fellows of Harvard College | Evaluation and improvement of nuclease cleavage specificity |
| GB201122458D0 (en) | 2011-12-30 | 2012-02-08 | Univ Wageningen | Modified cascade ribonucleoproteins and uses thereof |
| PL4289948T3 (en) | 2012-05-25 | 2025-06-02 | The Regents Of The University Of California | Methods and compositions for rna-directed target dna modification and for rna-directed modulation of transcription |
| CN105142669B (en) | 2012-12-06 | 2018-07-03 | 西格马-奥尔德里奇有限责任公司 | CRISPR-based genome modification and regulation |
| KR20170108172A (en) | 2013-03-14 | 2017-09-26 | 카리부 바이오사이언시스 인코포레이티드 | Compositions and methods of nucleic acid-targeting nucleic acids |
| US10760064B2 (en) | 2013-03-15 | 2020-09-01 | The General Hospital Corporation | RNA-guided targeting of genetic and epigenomic regulatory proteins to specific genomic loci |
| IL289396B2 (en) | 2013-03-15 | 2023-12-01 | The General Hospital Coporation | Using tru-grnas to increase the specificity of RNA-guided genome editing |
| US9234213B2 (en) | 2013-03-15 | 2016-01-12 | System Biosciences, Llc | Compositions and methods directed to CRISPR/Cas genomic engineering systems |
| US9902973B2 (en) | 2013-04-11 | 2018-02-27 | Caribou Biosciences, Inc. | Methods of modifying a target nucleic acid with an argonaute |
| US10011850B2 (en) | 2013-06-21 | 2018-07-03 | The General Hospital Corporation | Using RNA-guided FokI Nucleases (RFNs) to increase specificity for RNA-Guided Genome Editing |
| EP2826379A1 (en) | 2013-07-17 | 2015-01-21 | Dupont Nutrition Biosciences ApS | Streptococcus thermophilus strains |
| US9163284B2 (en) | 2013-08-09 | 2015-10-20 | President And Fellows Of Harvard College | Methods for identifying a target site of a Cas9 nuclease |
| US9359599B2 (en) | 2013-08-22 | 2016-06-07 | President And Fellows Of Harvard College | Engineered transcription activator-like effector (TALE) domains and uses thereof |
| US9322037B2 (en) | 2013-09-06 | 2016-04-26 | President And Fellows Of Harvard College | Cas9-FokI fusion proteins and uses thereof |
| US9526784B2 (en) | 2013-09-06 | 2016-12-27 | President And Fellows Of Harvard College | Delivery system for functional nucleases |
| US9340800B2 (en) | 2013-09-06 | 2016-05-17 | President And Fellows Of Harvard College | Extended DNA-sensing GRNAS |
| JP2016536021A (en) | 2013-11-07 | 2016-11-24 | エディタス・メディシン,インコーポレイテッド | CRISPR-related methods and compositions with governing gRNA |
| US20150165054A1 (en) | 2013-12-12 | 2015-06-18 | President And Fellows Of Harvard College | Methods for correcting caspase-9 point mutations |
| CA2956224A1 (en) | 2014-07-30 | 2016-02-11 | President And Fellows Of Harvard College | Cas9 proteins including ligand-dependent inteins |
| EP3224353B9 (en) | 2014-11-26 | 2023-08-09 | Technology Innovation Momentum Fund (Israel) Limited Partnership | Targeted elimination of bacterial genes |
| CN113699116A (en) | 2014-12-10 | 2021-11-26 | 明尼苏达大学董事会 | Genetically modified cells, tissues and organs for the treatment of diseases |
| ES2960226T3 (en) * | 2015-06-15 | 2024-03-01 | Univ North Carolina State | Methods and compositions for the efficient delivery of nucleic acids and RNA-based antimicrobials |
| IL295616A (en) | 2015-07-31 | 2022-10-01 | Us Health | Modified cells and methods of therapy |
| US9926546B2 (en) | 2015-08-28 | 2018-03-27 | The General Hospital Corporation | Engineered CRISPR-Cas9 nucleases |
| US9512446B1 (en) | 2015-08-28 | 2016-12-06 | The General Hospital Corporation | Engineered CRISPR-Cas9 nucleases |
| EP4434589A3 (en) | 2015-10-23 | 2025-05-14 | President and Fellows of Harvard College | Evolved cas9 proteins for gene editing |
| CN105505976A (en) * | 2015-12-25 | 2016-04-20 | 安徽大学 | Construction method of penicillin-producing recombined strain of streptomyces virginiae IBL14 |
| JP7012645B2 (en) | 2016-01-11 | 2022-01-28 | ザ ボード オブ トラスティーズ オブ ザ レランド スタンフォード ジュニア ユニバーシティー | Chimeric proteins and immunotherapeutic methods |
| MX2018008344A (en) | 2016-01-11 | 2018-12-06 | Univ Leland Stanford Junior | CHEMICAL PROTEINS AND METHODS TO REGULATE GENE EXPRESSION. |
| JP7231935B2 (en) | 2016-08-03 | 2023-03-08 | プレジデント アンド フェローズ オブ ハーバード カレッジ | Adenosine nucleobase editors and their uses |
| US11661590B2 (en) | 2016-08-09 | 2023-05-30 | President And Fellows Of Harvard College | Programmable CAS9-recombinase fusion proteins and uses thereof |
| WO2018039438A1 (en) | 2016-08-24 | 2018-03-01 | President And Fellows Of Harvard College | Incorporation of unnatural amino acids into proteins using base editing |
| AU2017342543B2 (en) | 2016-10-14 | 2024-06-27 | President And Fellows Of Harvard College | AAV delivery of nucleobase editors |
| EP4338799A3 (en) | 2016-10-18 | 2024-06-05 | Regents of the University of Minnesota | Tumor infiltrating lymphocytes and methods of therapy |
| WO2018119359A1 (en) | 2016-12-23 | 2018-06-28 | President And Fellows Of Harvard College | Editing of ccr5 receptor gene to protect against hiv infection |
| CN110662556A (en) | 2017-03-09 | 2020-01-07 | 哈佛大学的校长及成员们 | Cancer vaccine |
| US11898179B2 (en) | 2017-03-09 | 2024-02-13 | President And Fellows Of Harvard College | Suppression of pain by gene editing |
| JP2020510439A (en) | 2017-03-10 | 2020-04-09 | プレジデント アンド フェローズ オブ ハーバード カレッジ | Base-editing factor from cytosine to guanine |
| WO2018176009A1 (en) | 2017-03-23 | 2018-09-27 | President And Fellows Of Harvard College | Nucleobase editors comprising nucleic acid programmable dna binding proteins |
| US11560566B2 (en) | 2017-05-12 | 2023-01-24 | President And Fellows Of Harvard College | Aptazyme-embedded guide RNAs for use with CRISPR-Cas9 in genome editing and transcriptional activation |
| EP3645021A4 (en) | 2017-06-30 | 2021-04-21 | Intima Bioscience, Inc. | ADENO-ASSOCIATED VIRAL VECTORS FOR GENE THERAPY |
| US11732274B2 (en) | 2017-07-28 | 2023-08-22 | President And Fellows Of Harvard College | Methods and compositions for evolving base editors using phage-assisted continuous evolution (PACE) |
| WO2019139645A2 (en) | 2017-08-30 | 2019-07-18 | President And Fellows Of Harvard College | High efficiency base editors comprising gam |
| KR20200121782A (en) | 2017-10-16 | 2020-10-26 | 더 브로드 인스티튜트, 인코퍼레이티드 | Uses of adenosine base editor |
| US12406749B2 (en) | 2017-12-15 | 2025-09-02 | The Broad Institute, Inc. | Systems and methods for predicting repair outcomes in genetic engineering |
| US12157760B2 (en) | 2018-05-23 | 2024-12-03 | The Broad Institute, Inc. | Base editors and uses thereof |
| US12522807B2 (en) | 2018-07-09 | 2026-01-13 | The Broad Institute, Inc. | RNA programmable epigenetic RNA modifiers and uses thereof |
| WO2020092453A1 (en) | 2018-10-29 | 2020-05-07 | The Broad Institute, Inc. | Nucleobase editors comprising geocas9 and uses thereof |
| WO2020154500A1 (en) | 2019-01-23 | 2020-07-30 | The Broad Institute, Inc. | Supernegatively charged proteins and uses thereof |
| MX2021011426A (en) | 2019-03-19 | 2022-03-11 | Broad Inst Inc | METHODS AND COMPOSITIONS FOR EDITING NUCLEOTIDE SEQUENCES. |
| WO2020214842A1 (en) | 2019-04-17 | 2020-10-22 | The Broad Institute, Inc. | Adenine base editors with reduced off-target effects |
| US12435330B2 (en) | 2019-10-10 | 2025-10-07 | The Broad Institute, Inc. | Methods and compositions for prime editing RNA |
| WO2021226558A1 (en) | 2020-05-08 | 2021-11-11 | The Broad Institute, Inc. | Methods and compositions for simultaneous editing of both strands of a target double-stranded nucleotide sequence |
| WO2023006885A1 (en) | 2021-07-29 | 2023-02-02 | Dupont Nutrition Biosciences Aps | Compositions and methods for producing fermented plant-based compositions having cream flavor |
| EP4376626A1 (en) | 2021-07-29 | 2024-06-05 | International N&H Denmark ApS | Compositions and methods for producing fermented dairy compositions having cream flavor |
| WO2023082047A1 (en) | 2021-11-09 | 2023-05-19 | Dupont Nutrition Biosciences Aps | Compositions and methods for producing fermented dairy prod-ucts for storage at ambient temperature |
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| US4423079A (en) | 1980-07-14 | 1983-12-27 | Leo Kline | Growth promoting compositions for Lactobacillus sanfrancisco and method of preparation |
| US4621058A (en) | 1983-04-11 | 1986-11-04 | Mid-America Dairymen, Inc. | Method of preparing cheese starter media |
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| NZ239638A (en) | 1990-09-05 | 1993-12-23 | Univ North Carolina State | Bacteriophage resistant recombinant bacteria and their use in |
| AU3929793A (en) | 1992-03-31 | 1993-11-08 | Albert Einstein College Of Medicine Of Yeshiva University | Prokaryotes including DNA encoding bacteriophage immunity |
| US5888725A (en) * | 1992-09-22 | 1999-03-30 | The Secretary Of State For The Minister Of Agriculture Fisheries And Food In Her Britannic Majesty's Government Of The United Kingdom Of Great Britain And Northern Ireland | Method for identifying target bacteria |
| DE69600525T2 (en) * | 1996-12-23 | 1998-12-10 | Sitia-Yomo S.P.A., Mailand/Milano | Lyophilized food composition containing live bakery |
| WO2003008631A2 (en) | 2001-07-20 | 2003-01-30 | Health Protection Agency | Tagging of microorganisms |
| US7919277B2 (en) | 2004-04-28 | 2011-04-05 | Danisco A/S | Detection and typing of bacterial strains |
| CA2619833C (en) | 2005-08-26 | 2017-05-09 | Danisco A/S | Use of crispr associated genes (cas) |
| ES2610811T3 (en) | 2006-06-16 | 2017-05-03 | Dupont Nutrition Biosciences Aps | Streptococcus thermophilus bacteria |
| BR112013009583A2 (en) | 2010-10-20 | 2017-05-30 | Dupont Nutrition Biosci Aps | nucleic acid, vector, host cell, methods of preparing a bacterial lineage variant for typing, marking, generating and controlling bacterial populations, variant bacterial cell line and variant, kit, use of a nucleic acid, cell culture, product, product preparation process, phage mutants and phage escape mutant |
-
2007
- 2007-05-18 AT AT07777180T patent/ATE530669T1/en not_active IP Right Cessation
- 2007-05-18 DK DK11161778.3T patent/DK2426220T3/en active
- 2007-05-18 EP EP07777180.6A patent/EP2018441B2/en active Active
- 2007-05-18 US US12/225,852 patent/US9816140B2/en active Active
- 2007-05-18 PL PL07777180T patent/PL2018441T3/en unknown
- 2007-05-18 EP EP11161778.3A patent/EP2426220B1/en active Active
- 2007-05-18 PL PL11161778T patent/PL2426220T3/en unknown
- 2007-05-18 DK DK07777180.6T patent/DK2018441T4/en active
- 2007-05-18 ES ES07777180T patent/ES2373586T3/en active Active
- 2007-05-18 WO PCT/US2007/012039 patent/WO2007136815A2/en not_active Ceased
- 2007-05-18 ES ES11161778.3T patent/ES2590925T3/en active Active
- 2007-05-18 US US11/804,550 patent/US9399801B2/en active Active
Also Published As
| Publication number | Publication date |
|---|---|
| DK2018441T3 (en) | 2012-01-02 |
| EP2018441A2 (en) | 2009-01-28 |
| US9816140B2 (en) | 2017-11-14 |
| EP2426220A1 (en) | 2012-03-07 |
| ES2590925T3 (en) | 2016-11-24 |
| WO2007136815A2 (en) | 2007-11-29 |
| DK2426220T3 (en) | 2016-09-26 |
| US20080124725A1 (en) | 2008-05-29 |
| ATE530669T1 (en) | 2011-11-15 |
| EP2426220B1 (en) | 2016-06-22 |
| US20100104690A1 (en) | 2010-04-29 |
| WO2007136815A3 (en) | 2008-01-31 |
| US9399801B2 (en) | 2016-07-26 |
| ES2373586T3 (en) | 2012-02-06 |
| PL2426220T3 (en) | 2017-01-31 |
| EP2018441B1 (en) | 2011-10-26 |
| DK2018441T4 (en) | 2025-09-22 |
| EP2018441B2 (en) | 2025-07-02 |
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