PL3653731T3 - Sposób przeprowadzania analizy genotypowania - Google Patents

Sposób przeprowadzania analizy genotypowania

Info

Publication number
PL3653731T3
PL3653731T3 PL19216343.4T PL19216343T PL3653731T3 PL 3653731 T3 PL3653731 T3 PL 3653731T3 PL 19216343 T PL19216343 T PL 19216343T PL 3653731 T3 PL3653731 T3 PL 3653731T3
Authority
PL
Poland
Prior art keywords
genotyping analysis
performing genotyping
analysis
genotyping
Prior art date
Application number
PL19216343.4T
Other languages
English (en)
Inventor
Anne-Valérie DUMAS
Stéphanie CHAUVET
Sandra Guilloud
Jean-Pierre Martinant
Guillaume Collange
Original Assignee
Limagrain Europe
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Limagrain Europe filed Critical Limagrain Europe
Publication of PL3653731T3 publication Critical patent/PL3653731T3/pl

Links

Classifications

    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/20Allele or variant detection, e.g. single nucleotide polymorphism [SNP] detection
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869Methods for sequencing
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B40/00ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B40/00ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
    • G16B40/10Signal processing, e.g. from mass spectrometry [MS] or from PCR

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Engineering & Computer Science (AREA)
  • Health & Medical Sciences (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Medical Informatics (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • General Health & Medical Sciences (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Theoretical Computer Science (AREA)
  • Evolutionary Biology (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Chemical & Material Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Analytical Chemistry (AREA)
  • Molecular Biology (AREA)
  • Genetics & Genomics (AREA)
  • Software Systems (AREA)
  • Public Health (AREA)
  • Artificial Intelligence (AREA)
  • Bioethics (AREA)
  • Computer Vision & Pattern Recognition (AREA)
  • Data Mining & Analysis (AREA)
  • Databases & Information Systems (AREA)
  • Epidemiology (AREA)
  • Evolutionary Computation (AREA)
  • Organic Chemistry (AREA)
  • Signal Processing (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Biochemistry (AREA)
  • General Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Immunology (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
PL19216343.4T 2016-12-27 2016-12-27 Sposób przeprowadzania analizy genotypowania PL3653731T3 (pl)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
EP16306825.7A EP3343415B1 (en) 2016-12-27 2016-12-27 Method for performing genotyping analysis
EP19216343.4A EP3653731B1 (en) 2016-12-27 2016-12-27 Method for performing genotyping analysis

Publications (1)

Publication Number Publication Date
PL3653731T3 true PL3653731T3 (pl) 2024-04-08

Family

ID=57758470

Family Applications (2)

Application Number Title Priority Date Filing Date
PL19216343.4T PL3653731T3 (pl) 2016-12-27 2016-12-27 Sposób przeprowadzania analizy genotypowania
PL16306825T PL3343415T3 (pl) 2016-12-27 2016-12-27 Sposób przeprowadzania analizy genotypowania

Family Applications After (1)

Application Number Title Priority Date Filing Date
PL16306825T PL3343415T3 (pl) 2016-12-27 2016-12-27 Sposób przeprowadzania analizy genotypowania

Country Status (4)

Country Link
US (2) US20180181703A1 (pl)
EP (2) EP3343415B1 (pl)
DK (2) DK3343415T3 (pl)
PL (2) PL3653731T3 (pl)

Families Citing this family (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN114300045B (zh) * 2022-01-04 2025-03-07 杭州博日科技股份有限公司 基于对照组的半监督snp分型方法、装置和电子设备
CN116200531A (zh) * 2023-02-28 2023-06-02 华智生物技术有限公司 一种基于dh系混样建库和基因型填充的基因型分型方法及其应用
CN116525000B (zh) * 2023-07-04 2023-09-26 北京市农林科学院 兼容多荧光信号平台的农作物品种基因型分型方法及装置
CN119785877B (zh) * 2024-12-31 2025-10-24 哈尔滨工业大学 基于端到端组装基因组的变异检测方法

Family Cites Families (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US9916416B2 (en) * 2012-10-18 2018-03-13 Virginia Tech Intellectual Properties, Inc. System and method for genotyping using informed error profiles
US20140274749A1 (en) * 2013-03-15 2014-09-18 Affymetrix, Inc. Systems and Methods for SNP Characterization and Identifying off Target Variants

Also Published As

Publication number Publication date
US20180181703A1 (en) 2018-06-28
DK3343415T3 (da) 2020-05-04
EP3653731A1 (en) 2020-05-20
EP3343415B1 (en) 2020-02-12
EP3653731B1 (en) 2023-08-30
US20220172798A1 (en) 2022-06-02
PL3343415T3 (pl) 2020-09-21
EP3343415A1 (en) 2018-07-04
DK3653731T3 (da) 2023-11-27

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