WO2024251983A1 - Il-18 mimetics - Google Patents

Il-18 mimetics Download PDF

Info

Publication number
WO2024251983A1
WO2024251983A1 PCT/EP2024/065796 EP2024065796W WO2024251983A1 WO 2024251983 A1 WO2024251983 A1 WO 2024251983A1 EP 2024065796 W EP2024065796 W EP 2024065796W WO 2024251983 A1 WO2024251983 A1 WO 2024251983A1
Authority
WO
WIPO (PCT)
Prior art keywords
vhh
antibody domain
fragment
vhh antibody
sequence
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Pending
Application number
PCT/EP2024/065796
Other languages
French (fr)
Inventor
Stefan ZIELONKA
Lukas PEKAR
Paul ARRAS
Britta LIPINSKI
Laura UNMUTH
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Merck Patent GmbH
Original Assignee
Merck Patent GmbH
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Merck Patent GmbH filed Critical Merck Patent GmbH
Priority to CN202480051902.XA priority Critical patent/CN121666402A/en
Priority to AU2024286186A priority patent/AU2024286186A1/en
Publication of WO2024251983A1 publication Critical patent/WO2024251983A1/en
Anticipated expiration legal-status Critical
Pending legal-status Critical Current

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K16/00Immunoglobulins [IG], e.g. monoclonal or polyclonal antibodies
    • C07K16/18Immunoglobulins [IG], e.g. monoclonal or polyclonal antibodies against material from animals or humans
    • C07K16/28Immunoglobulins [IG], e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
    • C07K16/2866Immunoglobulins [IG], e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants against receptors for cytokines, lymphokines, interferons
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K39/00Medicinal preparations containing antigens or antibodies
    • A61K2039/505Medicinal preparations containing antigens or antibodies comprising antibodies
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K2317/00Immunoglobulins specific features
    • C07K2317/20Immunoglobulins specific features characterized by taxonomic origin
    • C07K2317/22Immunoglobulins specific features characterized by taxonomic origin from camelids, e.g. camel, llama or dromedary
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K2317/00Immunoglobulins specific features
    • C07K2317/20Immunoglobulins specific features characterized by taxonomic origin
    • C07K2317/24Immunoglobulins specific features characterized by taxonomic origin containing regions, domains or residues from different species, e.g. chimeric, humanized or veneered
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K2317/00Immunoglobulins specific features
    • C07K2317/30Immunoglobulins specific features characterized by aspects of specificity or valency
    • C07K2317/31Immunoglobulins specific features characterized by aspects of specificity or valency multispecific
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K2317/00Immunoglobulins specific features
    • C07K2317/50Immunoglobulins specific features characterized by immunoglobulin fragments
    • C07K2317/56Immunoglobulins specific features characterized by immunoglobulin fragments variable (Fv) region, i.e. VH and/or VL
    • C07K2317/565Complementarity determining region [CDR]
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K2317/00Immunoglobulins specific features
    • C07K2317/50Immunoglobulins specific features characterized by immunoglobulin fragments
    • C07K2317/56Immunoglobulins specific features characterized by immunoglobulin fragments variable (Fv) region, i.e. VH and/or VL
    • C07K2317/569Single domain, e.g. dAb, sdAb, VHH, VNAR or nanobody®
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K2317/00Immunoglobulins specific features
    • C07K2317/70Immunoglobulins specific features characterized by effect upon binding to a cell or to an antigen
    • C07K2317/75Agonist effect on antigen
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K2317/00Immunoglobulins specific features
    • C07K2317/90Immunoglobulins specific features characterized by (pharmaco)kinetic aspects or by stability of the immunoglobulin
    • C07K2317/92Affinity (KD), association rate (Ka), dissociation rate (Kd) or EC50 value

Definitions

  • the present disclosure relates to novel, VHH-based binders of IL-18Ra and/or IL-18RP with favorable characteristics. Moreover, the present disclosure relates to pharmaceutical compositions comprising such a compound.
  • Cytokines are potent immunomodulatory proteins comprising huge therapeutic potential. Consequently, several different molecules were granted marketing approval for the treatment of different diseases (Propper and Balkwill, 2022; Pires et al., 2021; Berraondo et al., 2019).
  • cytokine fusion proteins were engineered, which do not target the a-subunit of the IL-2 receptor (CD25) in order to eliminate the intrinsic bias of this cytokine for activating regulatory T cells (Tregs) (Klein et al., 2017; Dolgin, 2022).
  • Tegs regulatory T cells
  • fusions with the (effector silenced or attenuated) Fc portion of IgGs were engineered (Jazayeri and Carroll, 2008) as well as conjugates with polyethylene glycol (Eliason, 2001).
  • bifunctional antibody cytokine fusion proteins were constructed aiming at accumulating the immunomodulatory function of cytokines at the site of disease (Murer and Neri, 2019; Neri and Sondel, 2016).
  • cytokine mimetics or surrogate cytokines
  • bispecific antibody derivatives diabodies
  • EpoR Erythropoietin receptor
  • single domain antibody (sdAb)-based bispecifics were generated that activate signalling through the heterodimeric IL- 2 receptor Py (IL-2RPy).
  • sdAbs single domain antibody
  • bsAbs bispecific antibodies
  • bsAbs mimic the function of IL-2 but without preferential activation of Tregs via IL-2 receptor a binding
  • Garcia and co-workers recently described the engineering of VHH-derived surrogate agonists targeting IL-2RPy as well as type I IFN-mimicking bsAbs (Yen et al., 2022).
  • the group constructed surrogate agonists displaying functional diversification in terms of receptor downstream signalling compared to the natural cytokine.
  • bsAbs were constructed that trigger agonistic activity through binding to IL-2RP and IL-10RP, a receptor heterodimer that naturally does not exist. This is clearly demonstrating that the modular assembly of bsAbs enables the generation of cytokine mimetics with tailor-made functionalities which might be versatile building blocks for drug discovery.
  • IL-18 is a proinflammatory cytokine belonging to the IL-1 family of cytokines that mediates signalling through heterodimerization of the receptor subunits IL-18Ra and IL-18RP (Yasuda et al., 2019; Dinarello et al., 2013).
  • IL-18 stimulates IFN-y production in innate lymphoid cells as well as antigen-experienced T cells in synergy with IL-12 (Nakamura et al., 2020).
  • Recombinant (r)IL-18 has been assessed in clinical trials and demonstrated a favorable toxicity profile but limited efficacy as monotherapy (Atallah-Yunes and Robertson, 2022; Robertson et al., 2006; Tarhini et al., 2009).
  • Physiologically, the activity of IL-18 is balanced via the high- affinity neutralizing and naturally occurring IL-18 binding protein (IL-18BP) (Dinarello et al., 2013; Nakamura et al., 2020).
  • IL-18BP high- affinity neutralizing and naturally occurring IL-18 binding protein
  • IL18BP is expressed in the tumor microenvironment of several tumor types (Zhou et al., 2020). Moreover, the authors found increased IL-18BP concentrations in the serum of patients with non-small cell lung cancer which were further elevated post PD-1 or PD-L1 treatment. In the same study, the group engineered a decoyresistant IL-18 mutein that still triggered IL-18 receptor activation. This next-generation IL-18 derivative showed superior antitumor efficacy in preclinical models as monotherapy as well as in combination with immune checkpoint inhibition (Zhou et al., 2020).
  • IL-18 is a proinflammatory cytokine promoting NK cell activation as well as effector T cell maturation and function (Holder et al., 2022). Consequently, recombinant human (rh) IL-18 emerged as promising potential therapeutic inducing antitumor immunity, (rh) IL-18 was assessed in several clinical trials either as single agent or as combination therapy (see e.g. Tarhini et al., 2009; Robertson et al., 2008; Robertson et al., 2013; Simpkins et al., 2013; Robertson et al., 2018). (rh) IL-18 therapy has been well tolerated, however, clinical efficacy has been limited.
  • IL-18BP IL-18BP decoy receptor
  • IL-18BP binds to an overlapping site on IL-18 with IL-18Ra albeit with much higher affinities. Accordingly, it antagonizes signalling of IL- 18 by blocking the IL-18Ra interaction with IL-18.
  • Ring and colleagues described the generation of a decoy resistant mutein of IL-18 showing great promise for anti-cancer therapy in preclinical models (Zhou et al., 2020). This entity is currently in clinical investigations (NCT04787042).
  • IL-18 receptor agonists there is a need in the art for improved IL-18 receptor agonists. Moreover, there is a need in the art for improved ways to mimic the function of IL-18 in a taylor-made fashion, e.g. specifically with respect to different potencies and magnitudes of activation of IL-18R receptor activation, different potencies and magnitudes for the release of IFN-y or resistance to inhibition by IL-18BP.
  • the present disclosure overcomes the above-described problems and addresses the abovedescribed needs.
  • the present invention is, in part, based on the surprising observation that novel bispecific surrogate agonists can be obtained that are based on sdAbs (sdAb: single-domain antibody, also referred to herein as VHH or VHH), target both IL-18Ra and IL-18RP and mimic the functionality of IL-18. Moreover, it was found that it is possible to obtain such IL-18 mimics that at the same time are resistant to the decoy receptor IL-18BP. Moreover, it was surprisingly observed that molecules in which the overall design architecture with respect to valencies as well as to the spatial orientation of individual VHH-based paratopes is engineered within the molecule allow to obtain IL-18 mimetics in which the agonistic activities are tailor-made, e.g. with respect to their potency, the magnitude of the induced activation of IL-18R and IFN-y release or the tolerance to inhibition by IL-18BP receptor decoy.
  • sdAb single-domain antibody
  • the present disclosure relates to a VHH antibody domain or a fragment thereof, wherein
  • said VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of one VHH selected from the group consisting of VHH1, VHH2, VHH3, VHH4, VHH5, VHH6, VHH8, VHH9, VHH10 and VHH11 as shown in the Table of CDRs;
  • VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 as defined in (a) with modification, wherein the modification is that the sequence of at least one of CDR1, CDR2 and CDR3 is humanized; or
  • VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 as defined in (a) with modification, wherein the modification is
  • the present disclosure relates to a VHH antibody domain or a fragment thereof, wherein
  • said VHH antibody domain comprises the amino acid sequence of a VHH selected from the group consisting of VHH1, VHH2, VHH3, VHH4, VHH5, VHH6, VHH8, VHH9, VHHIO and VHH11 as shown in the Table of VHH Sequences;
  • VHH antibody domain comprises a VHH sequence as defined in (A) with modification, wherein the modification is that said sequence is humanized;
  • VHH antibody domain comprises a VHH sequence as defined in (A) with modification, wherein the modification is the replacement, addition or deletion of up to 25 amino acids;
  • said VHH antibody domain comprises a VHH sequence that is at least 75% identical to a VHH sequence referred to in (A);
  • the present disclosure relates to a VHH antibody domain or a fragment thereof, wherein
  • said VHH antibody domain consists of the amino acid sequence of a VHH selected from the group consisting of VHH1, VHH2, VHH3, VHH4, VHH5, VHH6, VHH8, VHH9, VHH10 and VHH11 as shown in the Table of VHH Sequences;
  • VHH antibody domain consists of a VHH sequence as defined in (A) with modification, wherein the modification is that said sequence is humanized;
  • VHH antibody domain consists of a VHH sequence as defined in (A) with modification, wherein the modification is the replacement, addition or deletion of up to 25 amino acids;
  • VHH antibody domain consists of a VHH sequence that is at least 75% identical to a VHH sequence referred to in (A).
  • present disclosure relates to a VHH antibody domain or a fragment thereof, wherein
  • said VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of one VHH selected from the group consisting of VHH12, VHH13, VHH14, VHH15, VHH16, VHH17, VHH18, VHH20, VHH21 and VHH22 as shown in the Table of CDRs;
  • said VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 as defined in (d) with modification, wherein the modification is that the sequence of at least one of CDR1, CDR2 and CDR3 is humanized; or
  • VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 as defined in (d) with modification, wherein the modification is
  • the present disclosure relates to a VHH antibody domain or a fragment thereof, wherein
  • said VHH antibody domain comprises the amino acid sequence of a VHH selected from the group consisting of VHH12, VHH13, VHH14, VHH15, VHH16, VHH17, VHH18, VHH20, VHH21 and VHH22 as shown in the Table of VHH Sequences;
  • said VHH antibody domain comprises a VHH sequence as defined in (E) with modification, wherein the modification is that said sequence is humanized;
  • VHH antibody domain comprises a VHH sequence as defined in (E) with modification, wherein the modification is the replacement, addition or deletion of up to 25 amino acids;
  • said VHH antibody domain comprises a VHH sequence that is at least 75% identical to a VHH sequence referred to in (E).
  • the present disclosure relates to a VHH antibody domain or a fragment thereof, wherein (E) said VHH antibody domain consists of the amino acid sequence of a VHH selected from the group consisting of VHH12, VHH13, VHH14, VHH15, VHH16, VHH17, VHH18, VHH20, VHH21 and VHH22 as shown in the Table of VHH Sequences;
  • VHH antibody domain consists of a VHH sequence as defined in (E) with modification, wherein the modification is that said sequence is humanized;
  • VHH antibody domain consists of a VHH sequence as defined in (E) with modification, wherein the modification is the replacement, addition or deletion of up to 25 amino acids;
  • said VHH antibody domain consists of a VHH sequence that is at least 75% identical to a VHH sequence referred to in (E).
  • the present disclosure relates to a compound comprising
  • VHH antibody domain or fragment thereof according to any one of embodiments 1 to
  • the present disclosure relates to a compound comprising
  • VHH antibody domain or fragment thereof according to any one of claims 189 to 374.
  • the present disclosure relates to a compound comprising
  • said VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of one VHH selected from the group consisting of VHH1, VHH2, VHH3, VHH4, VHH5, VHH6, VHH8, VHH9, VHH10 and VHH11 as shown in the Table of CDR;
  • VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 as defined in (a) with modification, wherein the modification is that the sequence of at least one of CDR1, CDR2 and CDR3 is humanized; or
  • VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 as defined in (a) with modification, wherein the modification is
  • said VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of one VHH selected from the group consisting of VHH12, VHH13, VHH14, VHH15, VHH16, VHH17, VHH18, VHH20, VHH21 and VHH22 as shown in the Table of CDRs;
  • said VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 as defined in (d) with modification, wherein the modification is that the sequence of at least one of CDR1, CDR2 and CDR3 is humanized; or
  • VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 as defined in (d) with modification, wherein the modification is
  • the present disclosure relates to a compound comprising
  • said VHH antibody domain comprises the amino acid sequence of a VHH selected from the group consisting of VHH1, VHH2, VHH3, VHH4, VHH5, VHH6, VHH8, VHH9, VHH10 and VHH11 as shown in the Table of VHH Sequences;
  • VHH antibody domain comprises a VHH sequence as defined in (A) with modification, wherein the modification is that said sequence is humanized; 258 (C) said VHH antibody domain comprises a VHH sequence as defined in (A) with
  • said VHH antibody domain comprises a VHH sequence that is at least 75%
  • VHH antibody domain comprises the amino acid sequence of a VHH
  • VHH12 selected from the group consisting of VHH12, VHH13, VHH14, VHH15,
  • VHH16, VHH17, VHH18, VHH20, VHH21 and VHH22 as shown in the
  • VHH antibody domain comprises a VHH sequence as defined in (E) with
  • said VHH antibody domain comprises a VHH sequence as defined in (E) with
  • said VHH antibody domain comprises a VHH sequence that is at least 75%
  • the present disclosure relates to a compound comprising
  • VHH antibody domain consists of the amino acid sequence of a VHH
  • VHH6, VHH8, VHH9, VHH10 and VHH11 as shown in the Table of VHH
  • VHH antibody domain consists of a VHH sequence as defined in (A)
  • VHH antibody domain consists of a VHH sequence as defined in (A)
  • VHH antibody domain consists of a VHH sequence that is at least 75%
  • VHH antibody domain consists of the amino acid sequence of a VHH selected from the group consisting of VHH12, VHH13, VHH14, VHH15, VHH16, VHH17, VHH18, VHH20, VHH21 and VHH22 as shown in the Table of VHH Sequences;
  • VHH antibody domain consists of a VHH sequence as defined in (E) with modification, wherein the modification is that said sequence is humanized;
  • VHH antibody domain consists of a VHH sequence as defined in (E) with modification, wherein the modification is the replacement, addition or deletion of up to 25 amino acids;
  • said VHH antibody domain consists of a VHH sequence that is at least 75% identical to a VHH sequence referred to in (E).
  • the present disclosure relates to a compound which is a bispecific antibody molecule comprising an IL-18Ra-binding VHH with an amino acid sequence as defined in the present disclosure below (First binding module) and an IL18RP-binding VHH with an amino acid sequence as defined in the present disclosure below (Second binding module).
  • the present disclosure relates to a bispecific antibody molecule prepared by the SEED (strand-exchange engineered domain) technology, said molecule comprising
  • VHH-SEED-AG-1 an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said IL-18Ra-binding VHH has an amino acid sequence as defined in the present disclosure below (“VHH-SEED-AG-1") and
  • VHH-SEED-GA-1 amino acid sequence as defined in the present disclosure below
  • the present disclosure relates to a pharmaceutical composition
  • a pharmaceutical composition comprising the compound or bispecific antibody molecule according to the present disclosure.
  • the present disclosure relates to the use of a compound or bispecific antibody molecule according to the present disclosure for activating IL-18R receptor. In another aspect, the present disclosure relates to the use of a compound or bispecific antibody molecule according to the present disclosure for inducing IL-y release from cells carrying an IL-18R receptor.
  • Figure 1 summarizes the overall strategy applied in the present disclosure for the generation of tailor-made cytokine mimetics based on sdAb-derived bispecifics and YSD-enabled antibody discovery.
  • IL-18 blue, ⁇
  • IL-18Ra yellow, *; the two "lobes" of IL-18Ra are each labelled with *
  • IL-18RP lime, #
  • IL-18BP dark grey, $
  • Top/Right panel Upon reformatting camelid-derived sdAbs with IL-18Ra-targeting functionality (orange, &) and IL- 18RP-targeting functionality (green, J) into an IgG-like bispecific, resulting cytokine mimetics cross-link the IL18R subunits IL-18Ra (yellow, *; the two "lobes" of IL-18Ra are each labelled with *) and IL-18RP (lime, #) and hence elicit down-stream signalling. Essentially, generated IL-18 mimetics are resistant to inhibition by IL-18BP (dark grey, $).
  • C Graphical alignments of 55 unique sdAb clones addressing IL-18Ra (top) as well as 101 independent clones targeting IL-18RP (bottom) retrieved from YSD library sorting. Complementarity-determining regions (CDRs) are highlighted. Red bars indicate high sequence diversity at the amino acid level and green bars represent high sequence conservation at a given position. Alignment conducted with MUSCLE alignment tool using Geneious Prime 2021.1.1.
  • Figure 2 shows data obtained with a reporter assay, confirming that combinatorial reformatting of monospecific (1+0) SEEDbodies into strictly monovalent (1+1) bsAbs enables the identification of IL- 18 mimetics with attenuated capacities to trigger NFKB reporter activity on IL-18 reporter cells.
  • (A) HEK-BlueTM reporter cells were incubated with increasing conentrations of reformatted bsAbs, as exemplarily shown for IL18R_VHHa2pi5, IL18R_VHHa8pi5, IL18R_VHHa2pi7 and IL18R_VHHa8pi7. Secreted embryonic alkaline phosphatase activity was monitored by determining the OD640.
  • Figure 3 depicts data from an IFN-y release assay, confirming that bispecific (1+1) surrogate agonists trigger IFN-y release on PBMCs isolated from healthy donors.
  • A IFN-y production of PBMCs stimulated with bsAbs at a fixed concentration of 100 nM or with (rh) IL-18 at 1 nM. Experiments were performed in the presence of 10 ng/ml (rh) IL-12.
  • Graph shows box and whisker plots as superimpositions with dot plots of IFN-y release of ten different donors. ****p ⁇ 0.0001,***p ⁇ 0.001, **p ⁇ 0.01, *p ⁇ 0.05.
  • IL18R_VHHaipi6 was used as negative control (given in red). Four leading candidates used for further characterization shown in green, purple, blue and orange. (B) TOP4 candidates evoke a dose dependent IFN-y read-out on PBMCs in the presence of low dose (rh) IL-12 (10 ng/ml). IL18R_VHHaipi6 as negative control shown in red was used at a fixed concentration of 1 pM. Mean values ⁇ SEM of ten independent experiments are shown.
  • Figure 4 shows schematic depictions of the architecture of antibodies prepared and summarizes data to characterize such antibodies. These data confirm that antibody engineering enables the generation of IL-18 mimetics with augmented agonism capacities.
  • A Schematic depiction of main different bispecific antibody architectures that were constructed within this work. Fusion of an anti-IL18Ra VHHa2 to the hinge region of the AG chain of the SEEDbody as well as engraftment of an anti-IL18Rp VHHP15 onto the GA chain results in the initially generated (1+1) format IL18R_VHHa2pi5. Replacing the VH and VLz.
  • VHHa2 and VHHpi5 respectively facilitates the generation of the IL18R_sdIgGa2pi5 architecture (2+2).
  • VHHa2 and VHHP15 are arranged in tandem (from A-terminus to C-terminus) and separated by a five amino acid Gly4Ser linker. The tandem is fused to the hinge region of an effector silenced IgGl Fc fragment.
  • the opposite orientation was constructed (VHHpi5 followed by VHHa2, IL18R_tanVHHpi5a2).
  • (D) Potency augmented tandem IL- 18 mimetics are resistant to inhibition by (rh) IL-18BP, whereas (rh) IL-18 is efficiently blocked from signalling.
  • PBMCs of healthy human donors were stimulated either with (rh) IL- 18 or IL18R_tanVHHa2pi5 and IL18R_tanVHHpi5a2 at a fixed concentration of 0.5 nM in the presence of (rh) IL-12 (10 ng/ml) and different concentrations of (rh) IL-18BP. Five independent experiments were performed and mean values ⁇ SEM are shown.
  • Figure 5 summarizes the sorting procedure applied to obtain sdABs.
  • YSD enables the enrichment of sdAbs targeting (rh) IL-18Ra and (rh) IL-18RP.
  • a two-dimensional sorting strategy was applied do detect full-length VHH display simultaneous to the binding functionality at a concentration of 250 nM.
  • Plots show 5xl0 3 events of the corresponding sorting output to visualize enrichment.
  • Figure 6 depicts the results of binding expreiments examining if monospecific (1+0) VHH SEEDbodies show specific binding to (rh) IL-18Ra (red) or IL-18RP (green).
  • A Schematic depiction of monospecific VHHs targeting (rh) IL-18Ra (red) or (rh) IL-18RP (green) engrafted onto the hinge region of the SEED backbone.
  • sdAbs targeting IL-18Ra were fused to the hinge region of the AG chain (msVHHaX), while VHHs addressing the IL-18RP subunit were grafted onto the GA chain (msVHHpX).
  • Either (rh) IL-18Ra or (rh) IL-18RP were loaded to HIS IK biosensors at a concentraion of 3 pg/ml followed by a first association of monospecific VHH SEEDbodies at 100 nM for 300 s. Subsequently, dissociation was measured for 100 s in kinetics buffer. Schemes generated via www.biorender.com.
  • Figure 7 presents data from a reporter assay suggesting that combinatorial reformatting of monospecific (1+0) SEEDbodies into strictly monovalent (1+1) bsAbs enables the identification of IL- 18 mimetics with attenuated capacities to trigger NFKB reporter activity on IL-18 reporter cells.
  • HEK-BlueTM reporter cells were incubated with increasing conentrations of reformatted bsAbs or (rh) IL-18 and secreted embryonic alkaline phosphatase activity was monitored by determining the OD640. Reporter activity was normalized to maximal IL-18 readout.
  • IL18R_VHHa2pi5 Exemplary dose-dependent IL-18R agonism triggered by surrogate agonists IL18R_VHHa2pi5, IL18R_VHHa8pi5, IL18R_VHHa2pi7 and IL18R_VHHa8pi7 in direct comparison to (rh) IL-18.
  • B Dose-dependent receptor agonism mediated by all 44 cytokine mimetics.
  • Figure 8 depicts data from an IFN-y release assay, showing that bispecific (1+1) surrogate agonists do not elicit IFN-y release on PBMCs isolated from healthy donors without the presence of low dose (rh) IL-12.
  • IFN-y production of PBMCs stimulated with bsAbs at a fixed concentration of 100 nM or with (rh) IL-18 at 1 nM in the absence of (rh)IL-12.
  • IL18R_VHHaipi6 was used as negative control (given in red).
  • Four leading candidates used for further characterization shown in green, purple, blue and orange.
  • Figure 9 shows binding kinetics data obtained with bispecific (1+1) TOP4 surrogate agonists against receptor subunits IL-18Ra and IL-18RP.
  • IL-18 mimetics were loaded on AHC biosensor tips at a concentration of 5 pg/ml. Interactions against both receptor subunits were measured at a concentration of 100 nM, 50 nM, 25 nM and 12.5 nM for 180 s followed by a dissociation in kinetics buffer for 300 s.
  • Figure 10 summarizes analytical size exclusion chromatography profiles of the generated surrogate agonist formats, indicating adequate purities following downstream purification. SEC-HPLC profiles of different formats as well as the corresponding target monomer peaks are shown. Absorbance at 214 nm was used for purity determination.
  • A SEC profiles of all eight formats post protein A purification, indicating purities below 90% target species for IL18R_VHHa2pi5_E430G and IL18R_sdIgGa2pi5_E430G.
  • B Analysis of IL18R_VHHa2pi5_E430G and IL18R_sdIgGa2pi5_E430G following second step SEC purification.
  • Figure 11 depicts data obtained by differential scanning fluorimetry to characterize the thermal unfolding of IL-18R agonistic bsAbs in different formats. Overlays of the melting curves for different formats of IL-18R agonists were recorded utilizing a temperature gradient from 20°C to 95°C at a slope of l°C/min. First derivatives of 350 nm / 330 nm curves are shown.
  • Figure 12 shows data obtained upon stimulation of PBMCs with the full dose-range of compound concentrations, indicating a strong hooking effect for (rh) IL 18 while for the different surrogate agonist formats it is not as pronounced.
  • IL18R_VHHaipi6 as negative control shown in red was used at a fixed concentration of 1 pM. Mean values ⁇ SEM of 13 independent experiments are shown.
  • FIG 13 shows data examining the binding of engineered tandem IL-18 mimetics.
  • Such engineered tandem IL-18 mimetics exhibit strong binding to both receptor subunits in an avidity driven setting, (rh) IL-18Ra or (rh) IL-18RP were loaded onto HIS1K sensor tips at 5 pg/ml.
  • a first association step was performed with different surrogate agonist formats at 100 nM, 33.3 nM and 11.1 nM for 180 s followed by a dissociation step in kinetics buffer fpr 300 s.
  • Figure 14 shows biolayer interferometry (BLI) binding data for the binding of bispecific surrogate agonists to (rh)IL-18BP.
  • BBI biolayer interferometry
  • Bispecific surrogate agonists do not bind to (rh)IL-18BP as determined, whereas (rh) IL-18BP binds to (rh)IL-18 with high affinities.
  • BsAbs were loaded on AHC biosensor tips at 5 pg/ml. Subsequently, association was monitored using 1 pM IL- 18BP for 180 s, followed by dissociation in kinetics buffer for 180 s.
  • Figure 15 summarizes binding data showing that bispecific cytokine mimetics compete with (rh)IL-18 for binding to (rh)IL-18Ra.
  • Surrogate agonists were loaded on AHC biosensor tips, followed by association using IL-18Ra at 200 nM for 300 s. Subsequently, a second association step was performed for 180 s using either (rh)IL-18 at 100 nM (red) or kinetics buffer (black).
  • SEQ ID NO: 1 to 11 provide the amino acid sequences of VHH1 to VHH11 (corresponding to al to al 1 according to the present disclosure).
  • the CDRs of these VHHs are provided in SEQ ID NO: 23 to 55.
  • SEQ ID NO: 12 to 22 provide the amino acid sequences of VHH12 to VHH22 (corresponding to pi2 to P22 according to the present disclosure).
  • the CDRs of these VHHs are provided in SEQ ID NO: 56 to 88.
  • SEQ ID NO: 89 to 99 provide the amino acid sequences of SEED AG chains based on VHH1 to VHH11 (al to al 1) according to the present disclosure.
  • SEQ ID NO: 100 to 110 provide the amino acid sequences of SEED GA chains based on VHH12 to VHH22 (P 12 to P22) according to the present disclosure.
  • the present disclosure relates to a VHH antibody domain or a fragment thereof, wherein
  • said VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of one VHH selected from the group consisting of VHH1, VHH2, VHH3, VHH4, VHH5, VHH6, VHH8, VHH9, VHH10 and VHH11 as shown in the Table of CDRs;
  • VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 as defined in (a) with modification, wherein the modification is that the sequence of at least one of CDR1, CDR2 and CDR3 is humanized; or
  • VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 as defined in (a) with modification, wherein the modification is
  • an “antibody” is a polypeptide substantially encoded by an immunoglobulin gene or immunoglobulin genes, or antigen binding fragment thereof, which specifically binds and recognizes an analyte (antigen).
  • Immunoglobulin genes include the kappa, lambda, alpha, gamma, delta, epsilon and mu constant region genes, as well as the myriad immunoglobulin variable region genes.
  • a heavy and the light chain variable domain of an antibody combine to specifically bind the antigen.
  • a naturally occurring primate e.g., human
  • murine immunoglobulin has heavy (H) chains and light (L) chains interconnected by disulfide bonds.
  • Primate antibodies can be class switched.
  • IgG subtypes of the llamas lack the light chains and the CHI domain and are called heavy chain antibodies.
  • camelid antibodies consisting of only a heavy chain are functional and stable in the absence of light chain.
  • the antigen-binding site of these heavy chain antibodies is formed only by a single domain, referred to as "VHH" (Kbnning et al., 2017) or, used synonymously herein, "VHH antibody domain”.
  • VHH variable domain of a heavy chain antibody
  • VHH The variable domain of a heavy chain antibody is called VHH.
  • the VHH is composed of only one polypeptide chain of 15 kDa and is considered the smallest known natural domain with full antigen-binding capacity.
  • Light and heavy chain variable domains contain a "framework" region interrupted by three hypervariable regions, also called “complementarity determining regions” or “CDRs” (see, e.g., Kabat et al., Sequences of Proteins of Immunological Interest, U.S. Department of Health and Human Services, 1991).
  • CDRs complementarity determining regions
  • the sequences of the framework regions of different light or heavy chains are relatively conserved within a species.
  • the framework region of an antibody that is the combined framework regions of the constituent light and heavy chains, serves to position and align the CDRs in three-dimensional space.
  • the CDRs are primarily responsible for antigen binding.
  • the CDRs are typically referred to as CDR1, CDR2, and CDR3 (from the N-terminus to C- terminus), and are also typically identified by the chain in which the particular CDR is located.
  • a VH CDR3 is located in the variable domain of the heavy chain of the antibody in which it is found
  • a VL CDR1 is the CDR1 from the variable domain of the light chain of the antibody in which it is found.
  • Light chain CDRs are sometimes referred to as CDR LI, CDR L2, and CDR L3.
  • Heavy chain CDRs are sometimes referred to as CDR Hl, CDR H2, and CDR H3.
  • VHH monoclonal antibodies have only a heavy chain, and thus include only one CDR1, CDR2 and CDR3.
  • the CDR3 is primarily responsible for antigen specificity.
  • a VHH includes in an N- to C- direction, the following structural regions: N - FR1 - CDR1 - FR2 - CDR2 - FR3 - CDR3 - FR4 - C, wherein FR denotes a framework region amino acid sequence and CDR denotes a complementary determining region amino acid sequence (see, e.g., Kabat et al., Sequences of Proteins of Immunological Interest, U.S. Department of Health and Human Services, 1991).
  • VHH antibody domain refers to the domain formed by the complete VHH, including (in an N- to C- direction) N - FR1 - CDR1 - FR2 - CDR2 - FR3 - CDR3 - FR4 - C.
  • a VHH antibody domain can be part of a larger molecule to which the VHH antibody domain is covalently linked.
  • a VHH antibody domain can be a molecule of its own that is not covalently linked to any other molecular structure.
  • sdAbs afford the benefit of multiple reformatting options in a ‘plug-and-play’ manner involving beads-on-string assemblies or facile combinations with existing Fab-based paratopes for the generation of bispecifics (Lipinski et al., 2023; Chanier and Chames, 2019).
  • the extent of the framework region and CDRs have been defined (see, Kabat et al., Sequences of Proteins of Immunological Interest, U.S. Department of Health and Human Services, 1991).
  • the CDRs of the heavy chain variable domain are located at residues 31-35 (CDR-H1), residues 50-65 (CDR-H2) and residues 95-102 (CDR-H3) according to the Kabat numbering system.
  • antibodies such as primate antibodies
  • the CDRs of the light chain variable domain are located at residues 24-34 (CDR-L1), residues 50-56 (CDR-L2) and residues 89-97 (CDR-L3) according to the Kabat numbering system.
  • the Kabat database is now maintained online.
  • the location of camelid CDRs can also be determined (see, for example, Sircar et al., J. Immunol. 186: 6357-6367, 2011); a program to determine camelid antibody structure, the Rosetta Antibody program, is available on the internet.
  • a “monoclonal antibody” is an antibody produced by a single clone of B-lymphocytes or by a cell into which the heavy chain gene (and optionally a light chain gene, such as for a primate antibody) of a single antibody have been transfected.
  • Monoclonal antibodies may be obtained using a variety of techniques known to those skilled in the art, including standard hybridoma technology (see e.g. Kohler and Milstein, Eur. J. Immunol. (1976), vol. 5, p. 511-519; Antibodies: A Laboratory Manual, 2nd edition (2014), editor Greenfield, Cold Spring Harbor Laboratory Press (USA); Immunobiology, 5th ed.
  • VHH antibody domains can be obtained by genetic engineering to yield a small protein having high affinity for a target, resulting in a low molecular weight antibody derived protein. See e.g. Sellmann et al., 2020; U.S. Patent No. 5,759,808, issued June 2, 1998; see also Dumoulin et al., (2003); Pleschberger et al., (2003); Cortez-Retamozo et al., (2002); and Lauwereys et al., (1998).
  • VHH molecules can be produced as recombinant monoclonal antibodies or antigen binding fragments in different expression platforms, avoiding the use of hybridomas and mice.
  • VHH monoclonal antibodies can be humanized monoclonal antibodies.
  • monoclonal antibodies can be chimeric antibodies.
  • a VHH monoclonal antibody has a molecular weight approximately one-tenth that of a human IgG molecule, and the protein has a physical diameter of only a few nanometers.
  • VHH monoclonal antibody One consequence of the small size is the ability of the VHH monoclonal antibody to bind to antigenic sites that are functionally invisible to larger antibody proteins, such that VHH monoclonal antibodies are useful as reagents to detect antigens that are otherwise cryptic using classical immunological techniques, and thus are of use as therapeutic agents.
  • a camelid VHH monoclonal antibody can inhibit as a result of binding to a specific site in a groove or narrow cleft of a target protein, and hence can serve in a capacity that more closely resembles the function of a classical low molecular weight drug than that of a classical antibody.
  • Humanizing an antib ody/antibody sequence refers to the process of "germlining" where a non-human (such as camelid, llama or synthetic) antibody sequence is adapted to be more similar to a human antibody sequence by replacing one or more individual amino acids with the corresponding amino acids of a human antibody sequence.
  • a non-human (such as camelid, llama or synthetic) antibody sequence is adapted to be more similar to a human antibody sequence by replacing one or more individual amino acids with the corresponding amino acids of a human antibody sequence.
  • human antibody sequence will be selected that is particularly close (i.e. has a high degree of sequence homology) to the non-human sequence.
  • Such a human antibody sequence can be identified e.g. by a BLAST search.
  • the corresponding amino acids can then be identified by a pairwise sequence alignment between the selected human antibody sequence and the non- human antibody sequence to be humanized.
  • Humanized immunoglobulins can be constructed by means of genetic engineering.
  • a VHH antibody domain is easily humanized based on the human VH domain, which has a sequence that is highly homologous to the sequence of the VHH antibody domain.
  • a VHH sequence can be adapted to reduce sequence liabilities. This may comprise, e.g., replacing amino acids susceptible for glycosylation, deamination, oxidization or isomerization by exchanging the respective amino acid(s) in the VHH sequence with the corresponding amino acid in the closest human germline sequence or with another amino acid (e.g. alanine).
  • the hydrophobic patches at the cell surface can be reduced by exchanging the respective amino acid(s) with less hydrophobic amino acid(s).
  • the amino acid replacements are chosen such that after the adaption the VHH sequence still binds to the same antigen and with similar characteristics as the VHH sequence before adaption.
  • VHHs can be used as modular building blocks for generating multivalent and/or multispecific antibody constructs, whereby “multivalent” means that the construct encompasses more than one single domain antibody and “multispecific” means that it encompasses single domain antibodies of more than one binding specificity.
  • a certain protein/amino acid sequence A is a "fragment" of another protein/amino acid sequence B.
  • the protein/amino acid sequence A lacks one or more amino acids at the N-terminus and/or one or more amino acids at the C-terminus.
  • one or more amino acids at the N-terminus and/or one or more amino acids at the C-terminus can for example readily be determined upon forming a sequence alignment e.g. with the BLAST family of programs.
  • VHH antibody domain when the present disclosure refers to an "VHH antibody domain or a fragment thereof', said fragment is an antigen-binding fragment.
  • said fragment binds to the same antigen as the "full-length" VHH antibody domain according to the present disclosure from which said fragment is derived (i.e. to IL-18Ra resp. IL-18RP).
  • said fragment of said VHH antibody domain is a C-terminal fragment. This means that compared to the "complete" VHH antibody domain sequence said fragment lacks amino acids at the N-terminus.
  • VHH antibody domain or fragment thereof of one VHH selected from the group consisting of VHH1, VHH2 and VHH3 as shown in the Table of CDRs" (or a corresponding wording)
  • said VHH antibody domain comprises the combination of CDRs or either VHH1 or VHH2 or VHH3, but not a mixture of CDRs selected from different of the listed VHHs.
  • said VHH antibody domain or fragment thereof includes e.g.
  • VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 as defined in e.g. (a) with modification, wherein the modification is e.g. that the sequence of at least one of CDR1, CDR2 and CDR3 is humanized
  • the skilled person is aware that this humanization exists compared to the corresponding sequence in the Table of CDRs that provides the combinations of CDR sequences without modification.
  • the present disclosure indicates the existence of a modification which is "replacement, addition or deletion" of a certain number of amino acids (e.g. up to three), the skilled person understands that this is an individual replacement, addition or deletion of the indicated number of amino acids.
  • the replaced, added or deleted amino acids may be at neighboring positions or at independent, isolated positions within the amino acid sequence.
  • this definition indicates the replacement, addition or deletion compared to the unmodified sequence in the Table of CDRs.
  • Embodiment 2 The VHH antibody domain or fragment thereof according to embodiment 1, wherein the modification in (b) is that the sequence of CDR1 and/or CDR2, but not the sequence of CDR3 is humanized.
  • Embodiment 3 The VHH antibody domain or fragment thereof according to any one of embodiments 1 or 2, wherein the modification in (b) is that the sequence of CDR1 is humanized, but not the sequence of CDR2 and CDR3.
  • Embodiment 4 The VHH antibody domain or fragment thereof according to any one of embodiments 1 or 2, wherein the modification in (b) is that the sequence of CDR2 is humanized, but not the sequence of CDR1 and CDR3.
  • Embodiment 5 The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 4, wherein the modification in (b) is that the sequence of one, but not more than one of CDR1, CDR2 and CDR3 is humanized.
  • Embodiment 6 The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 5, wherein said humanization of said CDR(s) is by replacing at least one amino acid in the sequence of said CDR by the corresponding amino acid of a human VH domain.
  • Embodiment 7 The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 6, wherein said humanization of said CDR(s) is by replacing up to three amino acids in the sequence of said CDR by the corresponding amino acid of a human VH domain.
  • Embodiment 8 The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 6, wherein said humanization of said CDR(s) is by replacing up to three amino acids in the sequence of CDR1 and/or CDR2 and up to one amino acid in the sequence of CDR3 by the corresponding amino acid of a human VH domain.
  • Embodiment 9 The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 6, wherein said humanization of said CDR(s) is by replacing up to two amino acids in the sequence of said CDR by the corresponding amino acid of a human VH domain.
  • Embodiment 10 The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 6, wherein said humanization of said CDR(s) is by replacing up to two amino acids in the sequence of CDR1 and/or CDR2 and up to one amino acid in the sequence of CDR3 by the corresponding amino acid of a human VH domain.
  • Embodiment 11 The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 10, wherein said humanization of said CDR(s) is by replacing one amino acid in the sequence of said CDR by the corresponding amino acid of a human VH domain.
  • Embodiment 12 The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 11, wherein the modification in (c) is - the replacement, addition or deletion of up to three amino acids in CDR1,
  • Embodiment 13 The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 11, wherein the modification in (c) is
  • Embodiment 14 The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 11, wherein the modification in (c) is
  • Embodiment 15 The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 11, wherein the modification in (c) is
  • the indication that the "sequence of CDR3 is unmodified" means that the sequence is unmodified compared to the sequence provided for CDR3 for the VHH at issue in the Table of CDRs.
  • Embodiment 16 The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 11, wherein the modification in (c) is
  • Embodiment 17 The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 11, wherein the modification in (c) is
  • Embodiment 18 The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 11, wherein the modification in (c) is
  • Embodiment 19 The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 11, wherein the modification in (c) is
  • Embodiment 20 The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 11, wherein the modification in (c) is
  • Embodiment 21 The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 11, wherein the modification in (c) is
  • Embodiment 22 The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 21, wherein the modification in (c) comprises only the replacement, but not the addition or deletion of amino acids.
  • Embodiment 23 The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 22, wherein said replacement is a conservative amino acid replacement.
  • a "conservative amino acid replacement” refers to the replacement of an amino acid by another, biologically similar amino acid. Conservative replacements are not likely to change the shape or characteristics of a protein/amino acid sequence. Examples of conservative replacements include the replacement of one hydrophobic residue such as isoleucine, valine, leucine or methionine for another, or the substitution of one polar residue for another, such as the substitution of arginine for lysine, glutamic for aspartic acid, or glutamine for asparagine.
  • Second aspect of the present disclosure (also referred to as “Embodiment 24"): According to a second aspect, the present disclosure relates to a VHH antibody domain or a fragment thereof, wherein
  • said VHH antibody domain comprises the amino acid sequence of a VHH selected from the group consisting of VHH1, VHH2, VHH3, VHH4, VHH5, VHH6, VHH8, VHH9, VHH10 and VHH11 as shown in the Table of VHH Sequences;
  • VHH antibody domain comprises a VHH sequence as defined in (A) with modification, wherein the modification is that said sequence is humanized;
  • VHH antibody domain comprises a VHH sequence as defined in (A) with modification, wherein the modification is the replacement, addition or deletion of up to 25 amino acids;
  • said VHH antibody domain comprises a VHH sequence that is at least 75% identical to a VHH sequence referred to in (A);
  • the present disclosure relates to a VHH antibody domain or a fragment thereof, wherein
  • said VHH antibody domain consists of the amino acid sequence of a VHH selected from the group consisting of VHH1, VHH2, VHH3, VHH4, VHH5, VHH6, VHH8, VHH9, VHH10 and VHH11 as shown in the Table of VHH Sequences;
  • VHH antibody domain consists of a VHH sequence as defined in (A) with modification, wherein the modification is that said sequence is humanized;
  • VHH antibody domain consists of a VHH sequence as defined in (A) with modification, wherein the modification is the replacement, addition or deletion of up to 25 amino acids;
  • said VHH antibody domain consists of a VHH sequence that is at least 75% identical to a VHH sequence referred to in (A).
  • VHH antibody domain comprises e.g. "the VHH sequence of a VHH selected from the group consisting of VHH1, VHH2, VHH3, VHH4, VHH5, VHH6, VHH8, VHH9, VHH10 and VHH11 as shown in the Table of VHH Sequences", this means that said VHH antibody domain comprises one and (not multiple or all) of the sequences listed in the Table of VHH Sequences.
  • VHH antibody domain or fragment thereof comprises/consists e.g. of a VHH sequence as defined in (A) "with modification, wherein the modification is that said sequence is humanized"
  • modification is that said sequence is humanized
  • sequence A is at least x % identical to another sequence B
  • sequence A has x % identity
  • the statement reflects a relationship between the two polypeptide sequences A and B determined by comparing the sequences.
  • identity refers to an exact amino acid to amino acid correspondence of the two polypeptide sequences, respectively, over the length of the sequences being compared.
  • a percentage to which the two sequences are identical may be determined.
  • the two sequences to be compared are aligned to give a maximum correlation between the sequences. This may include inserting "gaps" in either one or both sequences, to enhance the degree of alignment.
  • a % identity may be determined over the whole length of each of the sequences being compared (so-called global alignment), that is particularly suitable for sequences of the same or very similar length, or over shorter, defined lengths (so-called local alignment), that is more suitable for sequences of unequal length.
  • BLAST family of programs Altschul S F et al, 1990, Altschul S F et al, 1997, accessible through the home page of the NCBI at www.ncbi.nlm.nih.gov
  • FASTA Pearson WR, 1990
  • % identity according to the present disclosure is determined according to the BLAST family of programs (Altschul S F et al, 1990, Altschul S F et al, 1997, accessible through the home page of the NCBI at www.ncbi.nlm.nih.gov).
  • Embodiment 26 The VHH antibody domain or fragment thereof according to any one of embodiments 24 or 25, wherein said fragment of said VHH antibody domain comprises at least 75% of the amino acids of the sequence of said VHH antibody domain.
  • Embodiment 27 The VHH antibody domain or fragment thereof according to any one of embodiments 24 or 25, wherein said fragment of said VHH antibody domain comprises at least 80% of the amino acids of the sequence of said VHH antibody domain.
  • Embodiment 28 The VHH antibody domain or fragment thereof according to any one of embodiments 24 or 25, wherein said fragment of said VHH antibody domain comprises at least 85% of the amino acids of the sequence of said VHH antibody domain.
  • Embodiment 29 The VHH antibody domain or fragment thereof according to any one of embodiments 24 or 25, wherein said fragment of said VHH antibody domain comprises at least 90% of the amino acids of the sequence of said VHH antibody domain.
  • Embodiment 30 The VHH antibody domain or fragment thereof according to any one of embodiments 24 or 25, wherein said fragment of said VHH antibody domain comprises at least 95% of the amino acids of the sequence of said VHH antibody domain.
  • Embodiment 31 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 32 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 33 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 34 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 35 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 36 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 37 The VHH antibody domain or fragment thereof according to any one of
  • sequence/domain B this designates that said amino acid of sequence/domain A is replaced by 1007 the amino acid in sequence/domain B that in an alignment of the two sequences aligns with said
  • VHH antibody domain or fragment thereof according to any one of
  • Embodiment 39 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 40 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 41 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 42 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 43 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 44 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 45 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 46 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 47 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 48 The VHH antibody domain or fragment thereof according to any one of
  • 1052 antibody domain is within CDR1, CDR2 and/or CDR3.
  • Embodiment 49 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain is within CDR1 and/or CDR2.
  • Embodiment 50 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain is within CDR1.
  • VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain or fragment thereof according to any one of
  • 1068 antibody domain is not within CDR3.
  • Embodiment 53 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain or fragment thereof according to any one of
  • Embodiment 56 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain or fragment thereof according to any one of
  • Embodiment 59 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain or fragment thereof according to any one of
  • Embodiment 61 The VHH antibody domain or fragment thereof according to any one of
  • 1104 comprises the complementarity determining regions CDR1, CDR2 and CDR3 of one VHH
  • VHH9, VHH10 and VHH11 as shown in the Table of CDRs.
  • Embodiment 62 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain or fragment thereof comprises the complementarity
  • VHH1 consisting of VHH1, VHH2, VHH3, VHH4, VHH5, VHH6, VHH8, VHH9, VHH10
  • VHH antibody domain or fragment thereof comprises the complementarity
  • VHH antibody domain or fragment thereof comprises the complementarity
  • Embodiment 63 The VHH antibody domain or fragment thereof according to embodiment 62,
  • Embodiment 64 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 65 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 66 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 67 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 68 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 69 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 70 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 71 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 72 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 73 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 74 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 75 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 76 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 77 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 78 The VHH antibody domain or fragment thereof according to any one of
  • unmodified means unmodified compared to the sequence in
  • Embodiment 79 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 80 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 81 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 82 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 83 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 84 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 85 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 86 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 87 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 88 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 89 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 90 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 91 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain is an anti-IL-18Ra VHH antibody
  • Embodiment 92 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain is specific for IL-18Ra.
  • Embodiment 93 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 94 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 95 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 96 The VHH antibody domain or fragment thereof according to any one of
  • a first molecule/molecular group e.g.
  • an antibody/antibody component "is capable of specifically binding"/" specifically binds" to a
  • molecule/molecular group e.g. an antigen of interest
  • a first molecule/molecular group that "specifically binds" to a second molecule/molecular group that "specifically binds" to a second molecule/molecular group
  • 1300 molecule/molecular group may bind to that second molecule/molecular group with a KD of
  • Embodiment 97 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain or fragment thereof binds to
  • Embodiment 98 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 99 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain or fragment thereof binds to
  • Embodiment 100 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 101 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain or fragment thereof binds to
  • Embodiment 102 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 103 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 104 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain binds to recombinant human IL-18Ra ECD.
  • Embodiment 105 The VHH antibody domain or fragment thereof according to any one of
  • VHH2 SEQ ID NO: 2
  • IL-18Ra ECD 1339 with which VHH2 (SEQ ID NO: 2) binds to IL-18Ra ECD or stronger.
  • Embodiment 106 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 107 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 108 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 109 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 110 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 111 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 112 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 113 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 114 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 115 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 116 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 117 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 118 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 119 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 120 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 121 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 122 The VHH antibody domain or fragment thereof according to any one of
  • the degree of sequence identity can be determined by sequence alignment.
  • Embodiment 123 The VHH antibody domain or fragment thereof according to any one of
  • the degree of sequence identity can be determined by sequence alignment.
  • Embodiment 124 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 125 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain consisting of the sequence from the Table of VHH Sequences that has
  • Embodiment 126 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain consisting of the sequence from the Table of VHH Sequences that has
  • Embodiment 127 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 128 The VHH antibody domain or fragment thereof according to any one of
  • 1478 antibody domain to recombinant human IL-18Ra ECD is by not more than a factor of 2 stronger 1479 than the affinity (KD value) of the binding to recombinant human IL-18Ra ECD of a VHH
  • Embodiment 129 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain consisting of the sequence from the Table of VHH Sequences that has
  • Embodiment 130 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 131 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 132 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain of (A) comprises one VHH
  • VHH8, VHH9 and VHH10 shown in the Table of VHH Sequences.
  • Embodiment 133 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain of (A) comprises one VHH
  • Embodiment 134 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain of (A) comprises one VHH
  • VHH2 1511 sequence selected from the group consisting of VHH2, VHH6, VHH8 and VHH10 shown in
  • Embodiment 135 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain of (A) comprises one VHH
  • VHH6 1516 sequence selected from the group consisting of VHH6 and VHHl 1 shown in the Table of VHH
  • Embodiment 136 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain of (A) comprises one VHH
  • VHHl 1521 sequence selected from the group consisting of VHHl, VHH2, VHH5, VHH6, VHH8 and
  • Embodiment 137 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain of (A) comprises one VHH
  • Embodiment 138 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain of (A) comprises one VHH
  • VHH2 1531 sequence selected from the group consisting of VHH2 and VHH8 shown in the Table of VHH
  • Embodiment 139 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain of (A) comprises the VHH
  • Embodiment 140 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain of (A) comprises the VHH
  • Embodiment 141 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain of (A) comprises the VHH
  • Embodiment 142 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain of (A) comprises the VHH
  • Embodiment 143 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain of (A) comprises the VHH
  • Embodiment 144 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain of (A) comprises the VHH
  • Embodiment 145 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain of (A) comprises the VHH
  • Embodiment 146 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain of (A) comprises the VHH
  • Embodiment 147 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain of (A) comprises the VHH
  • Embodiment 148 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain of (A) comprises the VHH
  • Embodiment 149 The VHH antibody domain or fragment thereof according to any one of
  • VHH selected from the group consisting of VHH1, VHH2, VHH3, VHH4, VHH5, VHH6,
  • Embodiment 150 The VHH antibody domain or fragment thereof according to any one of
  • VHH selected from the group consisting of VHH1, VHH2, VHH5, VHH6, VHH8, VHH9 and
  • Embodiment 151 The VHH antibody domain or fragment thereof according to any one of
  • VHH2, VHH6, VHH8 and VHH10 1589 VHH2, VHH6, VHH8 and VHH10 as shown in the Table of CDRs.
  • Embodiment 152 The VHH antibody domain or fragment thereof according to any one of
  • VHH selected from the group consisting of VHH6 and VHH11.
  • Embodiment 153 The VHH antibody domain or fragment thereof according to any one of
  • VHH selected from the group consisting of VHH1, VHH2, VHH5, VHH6, VHH8 and VHH10
  • Embodiment 154 The VHH antibody domain or fragment thereof according to any one of
  • VHH selected from the group consisting of VHH2, VHH6, VHH8, VHH10 as shown in the
  • Embodiment 155 The VHH antibody domain or fragment thereof according to any one of
  • VHH selected from the group consisting of VHH2 or VHH8 as shown in the Table of CDRs.
  • Embodiment 156 The VHH antibody domain or fragment thereof according to any one of
  • VHH1 comprises the complementarity determining regions CDR1, CDR2 and CDR3 of VHH1
  • Embodiment 157 The VHH antibody domain or fragment thereof according to any one of
  • VHH2 comprises the complementarity determining regions CDR1, CDR2 and CDR3 of VHH2
  • Embodiment 158 The VHH antibody domain or fragment thereof according to any one of
  • 1625 thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of VHH3
  • Embodiment 159 The VHH antibody domain or fragment thereof according to any one of
  • 1630 thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of VHH4
  • Embodiment 160 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 161 The VHH antibody domain or fragment thereof according to any one of
  • VHH6 comprises the complementarity determining regions CDR1, CDR2 and CDR3 of VHH6
  • Embodiment 162 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 163 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 164 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 165 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 166 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 167 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 168 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain or fragment thereof does not
  • Embodiment 169 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 170 The VHH antibody domain or fragment thereof according to embodiment
  • Embodiment 171 The VHH antibody domain or fragment thereof according to embodiment
  • Embodiment 172 The VHH antibody domain or fragment thereof according to any one of
  • 1702 humanization refers to a VHH antibody domain that differs only by the amino acid changes
  • Embodiment 173 The VHH antibody domain or fragment thereof according to any one of
  • 1707 humanization binds to human IL-18Ra ECD with an affinity (KD value) that is not weaker by
  • Embodiment 174 The VHH antibody domain or fragment thereof according to any one of
  • 1713 humanization binds to human IL-18Ra ECD with an affinity (KD value) that is not weaker by 1714 a factor of more than 2 compared to the binding of a corresponding VHH antibody domain
  • Embodiment 175 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 176 The VHH antibody domain or fragment thereof according to any one of
  • Embodiment 177 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain comprises a VHH antibody
  • 1728 domain according to (A), (B) or (C)/said fragment of a VHH antibody domain comprises a
  • Embodiment 178 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain comprises a VHH antibody
  • 1733 domain according to (A), (B) or (D)/said fragment of a VHH antibody domain comprises a
  • Embodiment 179 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain comprises a VHH antibody
  • 1738 domain according to (A), (C) or (D)/said fragment of a VHH antibody domain comprises a
  • Embodiment 180 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain comprises a VHH antibody
  • 1743 domain according to (A) or (B)/said fragment of a VHH antibody domain comprises a fragment
  • Embodiment 181 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain comprises a VHH antibody 1748 domain according to (A) or (C)/said fragment of a VHH antibody domain comprises a fragment
  • Embodiment 182 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain comprises a VHH antibody
  • 1753 domain according to (A) or (D)/said fragment of a VHH antibody domain comprises a fragment
  • Embodiment 183 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain comprises a VHH antibody
  • 1758 domain according to (A)/said fragment of a VHH antibody domain comprises a fragment of a
  • Embodiment 184 The VHH antibody domain or fragment thereof according to any one of
  • VHH antibody domain comprises a VHH antibody
  • 1763 domain according to (B)/said fragment of a VHH antibody domain comprises a fragment of a
  • Embodiment 185 The VHH antibody domain or fragment thereof according to any one of
  • 1768 comprises complementarity determining regions according to (a) or (b).

Landscapes

  • Health & Medical Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Immunology (AREA)
  • Organic Chemistry (AREA)
  • General Health & Medical Sciences (AREA)
  • Biophysics (AREA)
  • Biochemistry (AREA)
  • Genetics & Genomics (AREA)
  • Medicinal Chemistry (AREA)
  • Molecular Biology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Peptides Or Proteins (AREA)
  • Medicines Containing Antibodies Or Antigens For Use As Internal Diagnostic Agents (AREA)

Abstract

The present disclosure relates to novel, VHH-based binders of IL-18Rα and/or IL-18Rβ with favorable characteristics. Moreover, the present disclosure relates to pharmaceutical compositions comprising such a compound.

Description

IL-18 MIMETICS
FIELD OF THE INVENTION
The present disclosure relates to novel, VHH-based binders of IL-18Ra and/or IL-18RP with favorable characteristics. Moreover, the present disclosure relates to pharmaceutical compositions comprising such a compound.
BACKGROUND OF THE INVENTION
Cytokines are potent immunomodulatory proteins comprising huge therapeutic potential. Consequently, several different molecules were granted marketing approval for the treatment of different diseases (Propper and Balkwill, 2022; Pires et al., 2021; Berraondo et al., 2019).
However, the pleiotropic mechanism of action of many cytokines, their short half-life combined with often dose-limiting toxicities when administered systemically hamper their therapeutic applicability (Pires et al., 2021; Amin et al., 2014).
To address these inherent limitations, "next-generation cytokines" were generated (Zheng et al., 2022). For instance, muteins of IL-2 were engineered, which do not target the a-subunit of the IL-2 receptor (CD25) in order to eliminate the intrinsic bias of this cytokine for activating regulatory T cells (Tregs) (Klein et al., 2017; Dolgin, 2022). To optimize the poor pharmacokinetics of cytokines, fusions with the (effector silenced or attenuated) Fc portion of IgGs were engineered (Jazayeri and Carroll, 2008) as well as conjugates with polyethylene glycol (Eliason, 2001). Besides, bifunctional antibody cytokine fusion proteins were constructed aiming at accumulating the immunomodulatory function of cytokines at the site of disease (Murer and Neri, 2019; Neri and Sondel, 2016).
Another interesting approach regarding "next-generation cytokines" relies on exploiting antibody-derivatives that mimic the function of cytokines, referred to as cytokine mimetics or surrogate cytokines (Saxton et al., 2023). In this respect, bispecific antibody derivatives (diabodies) have been developed that dimerize the Erythropoietin receptor (EpoR) (Moraga et al., 2015). Intriguingly, different diabodies induced differential EpoR phosphorylation ranging from weak and partial agonism to full agonism. In addition to this, single domain antibody (sdAb)-based bispecifics were generated that activate signalling through the heterodimeric IL- 2 receptor Py (IL-2RPy). These bispecific antibodies (bsAbs) mimic the function of IL-2 but without preferential activation of Tregs via IL-2 receptor a binding (Harris et al., 2021). Garcia and co-workers recently described the engineering of VHH-derived surrogate agonists targeting IL-2RPy as well as type I IFN-mimicking bsAbs (Yen et al., 2022). Importantly, the group constructed surrogate agonists displaying functional diversification in terms of receptor downstream signalling compared to the natural cytokine. Moreover, also bsAbs were constructed that trigger agonistic activity through binding to IL-2RP and IL-10RP, a receptor heterodimer that naturally does not exist. This is clearly demonstrating that the modular assembly of bsAbs enables the generation of cytokine mimetics with tailor-made functionalities which might be versatile building blocks for drug discovery.
IL-18 is a proinflammatory cytokine belonging to the IL-1 family of cytokines that mediates signalling through heterodimerization of the receptor subunits IL-18Ra and IL-18RP (Yasuda et al., 2019; Dinarello et al., 2013). IL-18 stimulates IFN-y production in innate lymphoid cells as well as antigen-experienced T cells in synergy with IL-12 (Nakamura et al., 2020). Recombinant (r)IL-18 has been assessed in clinical trials and demonstrated a favorable toxicity profile but limited efficacy as monotherapy (Atallah-Yunes and Robertson, 2022; Robertson et al., 2006; Tarhini et al., 2009). Physiologically, the activity of IL-18 is balanced via the high- affinity neutralizing and naturally occurring IL-18 binding protein (IL-18BP) (Dinarello et al., 2013; Nakamura et al., 2020). After treatment with (r)IL-18, substantially elevated levels of IL- 18BP were found in the serum of patients (Robertson et al., 2006; Robertson et al. 2008). Ring and colleagues were able to show that IL18BP is expressed in the tumor microenvironment of several tumor types (Zhou et al., 2020). Moreover, the authors found increased IL-18BP concentrations in the serum of patients with non-small cell lung cancer which were further elevated post PD-1 or PD-L1 treatment. In the same study, the group engineered a decoyresistant IL-18 mutein that still triggered IL-18 receptor activation. This next-generation IL-18 derivative showed superior antitumor efficacy in preclinical models as monotherapy as well as in combination with immune checkpoint inhibition (Zhou et al., 2020).
IL-18 is a proinflammatory cytokine promoting NK cell activation as well as effector T cell maturation and function (Holder et al., 2022). Consequently, recombinant human (rh) IL-18 emerged as promising potential therapeutic inducing antitumor immunity, (rh) IL-18 was assessed in several clinical trials either as single agent or as combination therapy (see e.g. Tarhini et al., 2009; Robertson et al., 2008; Robertson et al., 2013; Simpkins et al., 2013; Robertson et al., 2018). (rh) IL-18 therapy has been well tolerated, however, clinical efficacy has been limited. A possible explanation for the lack of therapeutic efficacy relies in the inhibition of IL-18 by the IL-18BP decoy receptor (Dinarello et al., 2013). IL-18BP binds to an overlapping site on IL-18 with IL-18Ra albeit with much higher affinities. Accordingly, it antagonizes signalling of IL- 18 by blocking the IL-18Ra interaction with IL-18. Recently, Ring and colleagues described the generation of a decoy resistant mutein of IL-18 showing great promise for anti-cancer therapy in preclinical models (Zhou et al., 2020). This entity is currently in clinical investigations (NCT04787042).
Despite the relevance of IL- 18 in the formation of tumors and the potential in targeting IL- 18 for cancer treatment, at present approaches that allow to mimic IL-18 and its functions in a taylor-made fashion are still lacking.
Accordingly, there is a need in the art for improved IL-18 receptor agonists. Moreover, there is a need in the art for improved ways to mimic the function of IL-18 in a taylor-made fashion, e.g. specifically with respect to different potencies and magnitudes of activation of IL-18R receptor activation, different potencies and magnitudes for the release of IFN-y or resistance to inhibition by IL-18BP.
The present disclosure overcomes the above-described problems and addresses the abovedescribed needs.
SUMMARY OF THE INVENTION
The present disclosure addresses the needs described above in the section "Background of the Invention" by the different aspects and embodiments described below.
The present invention is, in part, based on the surprising observation that novel bispecific surrogate agonists can be obtained that are based on sdAbs (sdAb: single-domain antibody, also referred to herein as VHH or VHH), target both IL-18Ra and IL-18RP and mimic the functionality of IL-18. Moreover, it was found that it is possible to obtain such IL-18 mimics that at the same time are resistant to the decoy receptor IL-18BP. Moreover, it was surprisingly observed that molecules in which the overall design architecture with respect to valencies as well as to the spatial orientation of individual VHH-based paratopes is engineered within the molecule allow to obtain IL-18 mimetics in which the agonistic activities are tailor-made, e.g. with respect to their potency, the magnitude of the induced activation of IL-18R and IFN-y release or the tolerance to inhibition by IL-18BP receptor decoy.
In an aspect, the present disclosure relates to a VHH antibody domain or a fragment thereof, wherein
(a) said VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of one VHH selected from the group consisting of VHH1, VHH2, VHH3, VHH4, VHH5, VHH6, VHH8, VHH9, VHH10 and VHH11 as shown in the Table of CDRs;
(b) said VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 as defined in (a) with modification, wherein the modification is that the sequence of at least one of CDR1, CDR2 and CDR3 is humanized; or
(c) said VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 as defined in (a) with modification, wherein the modification is
- the replacement, addition or deletion of up to three amino acids in CDR1,
- the replacement, addition or deletion of up to three amino acids in CDR2 and/or
- the replacement, addition or deletion of up to three amino acids in CDR3; Table of CDRs:
Figure imgf000006_0001
Figure imgf000007_0001
Figure imgf000008_0001
In another aspect, the present disclosure relates to a VHH antibody domain or a fragment thereof, wherein
(A) said VHH antibody domain comprises the amino acid sequence of a VHH selected from the group consisting of VHH1, VHH2, VHH3, VHH4, VHH5, VHH6, VHH8, VHH9, VHHIO and VHH11 as shown in the Table of VHH Sequences;
(B) said VHH antibody domain comprises a VHH sequence as defined in (A) with modification, wherein the modification is that said sequence is humanized;
(C) said VHH antibody domain comprises a VHH sequence as defined in (A) with modification, wherein the modification is the replacement, addition or deletion of up to 25 amino acids; or
(D) said VHH antibody domain comprises a VHH sequence that is at least 75% identical to a VHH sequence referred to in (A);
Table of VHH Sequences:
Figure imgf000008_0002
Figure imgf000009_0001
Figure imgf000010_0001
In another aspect, aspect, the present disclosure relates to a VHH antibody domain or a fragment thereof, wherein
(A) said VHH antibody domain consists of the amino acid sequence of a VHH selected from the group consisting of VHH1, VHH2, VHH3, VHH4, VHH5, VHH6, VHH8, VHH9, VHH10 and VHH11 as shown in the Table of VHH Sequences;
(B) said VHH antibody domain consists of a VHH sequence as defined in (A) with modification, wherein the modification is that said sequence is humanized;
(C) said VHH antibody domain consists of a VHH sequence as defined in (A) with modification, wherein the modification is the replacement, addition or deletion of up to 25 amino acids; or
(D) said VHH antibody domain consists of a VHH sequence that is at least 75% identical to a VHH sequence referred to in (A). In another aspect, aspect, the present disclosure relates to a VHH antibody domain or a fragment thereof, wherein
(d) said VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of one VHH selected from the group consisting of VHH12, VHH13, VHH14, VHH15, VHH16, VHH17, VHH18, VHH20, VHH21 and VHH22 as shown in the Table of CDRs;
(e) said VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 as defined in (d) with modification, wherein the modification is that the sequence of at least one of CDR1, CDR2 and CDR3 is humanized; or
(f) said VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 as defined in (d) with modification, wherein the modification is
- the replacement, addition or deletion of up to three amino acids in CDR1,
- the replacement, addition or deletion of up to three amino acids in CDR2 and/or
- the replacement, addition or deletion of up to three amino acids in CDR3.
In another aspect, aspect, the present disclosure relates to a VHH antibody domain or a fragment thereof, wherein
(E) said VHH antibody domain comprises the amino acid sequence of a VHH selected from the group consisting of VHH12, VHH13, VHH14, VHH15, VHH16, VHH17, VHH18, VHH20, VHH21 and VHH22 as shown in the Table of VHH Sequences;
(F) said VHH antibody domain comprises a VHH sequence as defined in (E) with modification, wherein the modification is that said sequence is humanized;
(G) said VHH antibody domain comprises a VHH sequence as defined in (E) with modification, wherein the modification is the replacement, addition or deletion of up to 25 amino acids; or
(H) said VHH antibody domain comprises a VHH sequence that is at least 75% identical to a VHH sequence referred to in (E).
In another aspect, aspect, the present disclosure relates to a VHH antibody domain or a fragment thereof, wherein (E) said VHH antibody domain consists of the amino acid sequence of a VHH selected from the group consisting of VHH12, VHH13, VHH14, VHH15, VHH16, VHH17, VHH18, VHH20, VHH21 and VHH22 as shown in the Table of VHH Sequences;
(F) said VHH antibody domain consists of a VHH sequence as defined in (E) with modification, wherein the modification is that said sequence is humanized;
(G) said VHH antibody domain consists of a VHH sequence as defined in (E) with modification, wherein the modification is the replacement, addition or deletion of up to 25 amino acids; or
(H) said VHH antibody domain consists of a VHH sequence that is at least 75% identical to a VHH sequence referred to in (E).
In another aspect, aspect, the present disclosure relates to a compound comprising
- a VHH antibody domain or fragment thereof according to any one of embodiments 1 to
188.
In another aspect, aspect, the present disclosure relates to a compound comprising
- a VHH antibody domain or fragment thereof according to any one of claims 189 to 374.
In another aspect, aspect, the present disclosure relates to a compound comprising
- a first binding module which is a VHH antibody domain or fragment thereof, wherein
(a) said VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of one VHH selected from the group consisting of VHH1, VHH2, VHH3, VHH4, VHH5, VHH6, VHH8, VHH9, VHH10 and VHH11 as shown in the Table of CDR;
(b) said VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 as defined in (a) with modification, wherein the modification is that the sequence of at least one of CDR1, CDR2 and CDR3 is humanized; or
(c) said VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 as defined in (a) with modification, wherein the modification is
- the replacement, addition or deletion of up to three amino acids in CDR1, - the replacement, addition or deletion of up to three amino acids in CDR2 and/or
- the replacement, addition or deletion of up to three amino acids in CDR3;
- a second binding module which is a VHH antibody domain or a fragment thereof, wherein
(d) said VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of one VHH selected from the group consisting of VHH12, VHH13, VHH14, VHH15, VHH16, VHH17, VHH18, VHH20, VHH21 and VHH22 as shown in the Table of CDRs;
(e) said VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 as defined in (d) with modification, wherein the modification is that the sequence of at least one of CDR1, CDR2 and CDR3 is humanized; or
(f) said VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 as defined in (d) with modification, wherein the modification is
- the replacement, addition or deletion of up to three amino acids in CDR1,
- the replacement, addition or deletion of up to three amino acids in CDR2 and/or
- the replacement, addition or deletion of up to three amino acids in CDR3.
In another aspect, aspect, the present disclosure relates to a compound comprising
- a first binding module which is a VHH antibody domain or fragment thereof, wherein
(A) said VHH antibody domain comprises the amino acid sequence of a VHH selected from the group consisting of VHH1, VHH2, VHH3, VHH4, VHH5, VHH6, VHH8, VHH9, VHH10 and VHH11 as shown in the Table of VHH Sequences;
(B) said VHH antibody domain comprises a VHH sequence as defined in (A) with modification, wherein the modification is that said sequence is humanized; 258 (C) said VHH antibody domain comprises a VHH sequence as defined in (A) with
259 modification, wherein the modification is the replacement, addition or
260 deletion of up to 25 amino acids; or
261 (D) said VHH antibody domain comprises a VHH sequence that is at least 75%
262 identical to a VHH sequence referred to in (A);
263 - a second binding module which is a VHH antibody domain or a fragment thereof, wherein
264 (E) said VHH antibody domain comprises the amino acid sequence of a VHH
265 selected from the group consisting of VHH12, VHH13, VHH14, VHH15,
266 VHH16, VHH17, VHH18, VHH20, VHH21 and VHH22 as shown in the
267 Table of VHH Sequences;
268 (F) said VHH antibody domain comprises a VHH sequence as defined in (E) with
269 modification, wherein the modification is that said sequence is humanized;
270 (G) said VHH antibody domain comprises a VHH sequence as defined in (E) with
271 modification, wherein the modification is the replacement, addition or
Til deletion of up to 25 amino acids; or
273 (H) said VHH antibody domain comprises a VHH sequence that is at least 75%
274 identical to a VHH sequence referred to in (E).
U
276 In another aspect, aspect, the present disclosure relates to a compound comprising
277 - a first binding module which is a VHH antibody domain or fragment thereof, wherein
278 (A) said VHH antibody domain consists of the amino acid sequence of a VHH
279 selected from the group consisting of VHH1, VHH2, VHH3, VHH4, VHH5,
280 VHH6, VHH8, VHH9, VHH10 and VHH11 as shown in the Table of VHH
281 Sequences;
282 (B) said VHH antibody domain consists of a VHH sequence as defined in (A)
283 with modification, wherein the modification is that said sequence is
284 humanized;
285 (C) said VHH antibody domain consists of a VHH sequence as defined in (A)
286 with modification, wherein the modification is the replacement, addition or
287 deletion of up to 25 amino acids; or
288 (D) said VHH antibody domain consists of a VHH sequence that is at least 75%
289 identical to a VHH sequence referred to in (A);
290 - a second binding module which is a VHH antibody domain or a fragment thereof, wherein (E) said VHH antibody domain consists of the amino acid sequence of a VHH selected from the group consisting of VHH12, VHH13, VHH14, VHH15, VHH16, VHH17, VHH18, VHH20, VHH21 and VHH22 as shown in the Table of VHH Sequences;
(F) said VHH antibody domain consists of a VHH sequence as defined in (E) with modification, wherein the modification is that said sequence is humanized;
(G) said VHH antibody domain consists of a VHH sequence as defined in (E) with modification, wherein the modification is the replacement, addition or deletion of up to 25 amino acids; or
(H) said VHH antibody domain consists of a VHH sequence that is at least 75% identical to a VHH sequence referred to in (E).
In another aspect, the present disclosure relates to a compound which is a bispecific antibody molecule comprising an IL-18Ra-binding VHH with an amino acid sequence as defined in the present disclosure below (First binding module) and an IL18RP-binding VHH with an amino acid sequence as defined in the present disclosure below (Second binding module).
In another aspect, the present disclosure relates to a bispecific antibody molecule prepared by the SEED (strand-exchange engineered domain) technology, said molecule comprising
- an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said IL-18Ra-binding VHH has an amino acid sequence as defined in the present disclosure below ("VHH-SEED-AG-1") and
- a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
IL18RP-binding VHH has an amino acid sequence as defined in the present disclosure below ("VHH-SEED-GA-1").
In another aspect, the present disclosure relates to a pharmaceutical composition comprising the compound or bispecific antibody molecule according to the present disclosure.
In another aspect, the present disclosure relates to the use of a compound or bispecific antibody molecule according to the present disclosure for activating IL-18R receptor. In another aspect, the present disclosure relates to the use of a compound or bispecific antibody molecule according to the present disclosure for inducing IL-y release from cells carrying an IL-18R receptor.
BRIEF DESCRIPTION OF THE FIGURES
In the following, reference is made to the figures. All methods referred to in the figure descriptions below were carried out as described in detail in the examples.
Figure 1 summarizes the overall strategy applied in the present disclosure for the generation of tailor-made cytokine mimetics based on sdAb-derived bispecifics and YSD-enabled antibody discovery. (A) Bottom/Left panel: IL-18 (blue, §) triggers IL-18R downstream signalling by consecutive binding to IL-18Ra (yellow, *; the two "lobes" of IL-18Ra are each labelled with *) followed by IL-18RP (lime, #) recruitment. IL-18BP (dark grey, $) inhibits IL-18 by high- affinity binding and hence, by blocking the IL-18/IL-18Ra interaction. Top/Right panel: Upon reformatting camelid-derived sdAbs with IL-18Ra-targeting functionality (orange, &) and IL- 18RP-targeting functionality (green, J) into an IgG-like bispecific, resulting cytokine mimetics cross-link the IL18R subunits IL-18Ra (yellow, *; the two "lobes" of IL-18Ra are each labelled with *) and IL-18RP (lime, #) and hence elicit down-stream signalling. Essentially, generated IL-18 mimetics are resistant to inhibition by IL-18BP (dark grey, $). Generated with PyMOL software version 2.3.0 based on PDB entries YYY and ZZZ and modified using www.biorender.com (B) Immunization of cam elids followed by YSD facilitate the enrichment of sdAbs specific to (rh) IL-18Ra and (rh) IL-18RP. One sublibrary was generated for each specimen (huarizo and llama) and sorted separately. In the first round of selection, a mixture of both (rh) receptor subunits was exploited at a concentration of 250 nM. In the subsequent second sorting round, enriched libraries were sorted separately against each antigen at 250 nM. A two-dimensional sorting strategy was applied to select for full-length VHH display in addition to antigen binding. Percentage of cells in sorting gates are shown. Plots show 5xl04 events. (C) Graphical alignments of 55 unique sdAb clones addressing IL-18Ra (top) as well as 101 independent clones targeting IL-18RP (bottom) retrieved from YSD library sorting. Complementarity-determining regions (CDRs) are highlighted. Red bars indicate high sequence diversity at the amino acid level and green bars represent high sequence conservation at a given position. Alignment conducted with MUSCLE alignment tool using Geneious Prime 2021.1.1.
Figure 2 shows data obtained with a reporter assay, confirming that combinatorial reformatting of monospecific (1+0) SEEDbodies into strictly monovalent (1+1) bsAbs enables the identification of IL- 18 mimetics with attenuated capacities to trigger NFKB reporter activity on IL-18 reporter cells. (A) HEK-Blue™ reporter cells were incubated with increasing conentrations of reformatted bsAbs, as exemplarily shown for IL18R_VHHa2pi5, IL18R_VHHa8pi5, IL18R_VHHa2pi7 and IL18R_VHHa8pi7. Secreted embryonic alkaline phosphatase activity was monitored by determining the OD640. Reporter activity was normalized to maximal IL-18 read-out. (B) Heatmap of NFKB reporter activitation elicited by combinatorial reformatted (1+1) bsAbs. Molecules failing initial quality control (target monomer peak in SEC < 96% post protein A purification given in dark grey, functionally inactive bsAbs shown in red (J), minimally active surrogate agonists (NFKB reporter activitation < 50% compared to (rh) IL-18at 1 nM or EC50 > 0.1 nM) in yellow (#) and moderately active IL-18 mimetics (NFKB reporter activitation > 50% compared to (rh) IL-18at 1 nM or EC50 < 0.1 nM) depicted in green (*).
Figure 3 depicts data from an IFN-y release assay, confirming that bispecific (1+1) surrogate agonists trigger IFN-y release on PBMCs isolated from healthy donors. (A) IFN-y production of PBMCs stimulated with bsAbs at a fixed concentration of 100 nM or with (rh) IL-18 at 1 nM. Experiments were performed in the presence of 10 ng/ml (rh) IL-12. Graph shows box and whisker plots as superimpositions with dot plots of IFN-y release of ten different donors. ****p < 0.0001,***p < 0.001, **p < 0.01, *p < 0.05. IL18R_VHHaipi6 was used as negative control (given in red). Four leading candidates used for further characterization shown in green, purple, blue and orange. (B) TOP4 candidates evoke a dose dependent IFN-y read-out on PBMCs in the presence of low dose (rh) IL-12 (10 ng/ml). IL18R_VHHaipi6 as negative control shown in red was used at a fixed concentration of 1 pM. Mean values ± SEM of ten independent experiments are shown.
Figure 4 shows schematic depictions of the architecture of antibodies prepared and summarizes data to characterize such antibodies. These data confirm that antibody engineering enables the generation of IL-18 mimetics with augmented agonism capacities. (A) Schematic depiction of main different bispecific antibody architectures that were constructed within this work. Fusion of an anti-IL18Ra VHHa2 to the hinge region of the AG chain of the SEEDbody as well as engraftment of an anti-IL18Rp VHHP15 onto the GA chain results in the initially generated (1+1) format IL18R_VHHa2pi5. Replacing the VH and VLz. of an effector silenced IgG by VHHa2 and VHHpi5, respectively facilitates the generation of the IL18R_sdIgGa2pi5 architecture (2+2). Within the IL18R_tanVHHa2pi5 design (2+2), VHHa2 and VHHP15 are arranged in tandem (from A-terminus to C-terminus) and separated by a five amino acid Gly4Ser linker. The tandem is fused to the hinge region of an effector silenced IgGl Fc fragment. Of note, also the opposite orientation was constructed (VHHpi5 followed by VHHa2, IL18R_tanVHHpi5a2). In addition, all four molecules were also produced harboring the E430G mutation for on-target hexamerization. Structure models generated with PyMOL software version 2.3.0. (B) Distinct surrogate agonist formats of the same paratopes (VHHa2 and VHHP15) display differential properties in eliciting a functional IFN-y response on human PBMCs isolated from healthy donors at fixed concentrations. Experiments were performed at two different concentrations (10 nM and 1 nM) in the presence of 10 ng/ml (rh) IL-12. Graph shows box and whisker plots as superimpositions with dot plots of IFN-y release of six different donors. ****p < 0.0001,***p < 0.001, **p < 0.01, *p < 0.05. (C) Surrogate agonists arranged in tandem (IL18R_tanVHHa2pi5 and IL18R_tanVHHpi5a2) elicit enhanced IFN-y production in terms of potencies and magnitude on PBMCs isolated from healthy donors, resulting in a variant with increased potencies compared with (rh) IL-18. All experiments were performed in the presence of low dose (rh) IL-12 (10 ng/ml). IL18R_VHHaipi6 as negative control shown in red was used at a fixed concentration of 1 pM. Mean values ± SEM of 13 independent experiments are shown. (D) Potency augmented tandem IL- 18 mimetics are resistant to inhibition by (rh) IL-18BP, whereas (rh) IL-18 is efficiently blocked from signalling. PBMCs of healthy human donors were stimulated either with (rh) IL- 18 or IL18R_tanVHHa2pi5 and IL18R_tanVHHpi5a2 at a fixed concentration of 0.5 nM in the presence of (rh) IL-12 (10 ng/ml) and different concentrations of (rh) IL-18BP. Five independent experiments were performed and mean values ± SEM are shown.
Figure 5 summarizes the sorting procedure applied to obtain sdABs. YSD enables the enrichment of sdAbs targeting (rh) IL-18Ra and (rh) IL-18RP. Sorting output after two sorting rounds of each library against (rh) IL-18Ra and (rh) IL-18RP. A two-dimensional sorting strategy was applied do detect full-length VHH display simultaneous to the binding functionality at a concentration of 250 nM. Plots show 5xl03 events of the corresponding sorting output to visualize enrichment.
Figure 6 depicts the results of binding expreiments examining if monospecific (1+0) VHH SEEDbodies show specific binding to (rh) IL-18Ra (red) or IL-18RP (green). (A) Schematic depiction of monospecific VHHs targeting (rh) IL-18Ra (red) or (rh) IL-18RP (green) engrafted onto the hinge region of the SEED backbone. sdAbs targeting IL-18Ra were fused to the hinge region of the AG chain (msVHHaX), while VHHs addressing the IL-18RP subunit were grafted onto the GA chain (msVHHpX). (B) Binding of respective monospecific VHH SEEDbodies to (rh) IL-18Ra (red) or (rh) IL-18RP (green) as determined by BLI. Either (rh) IL-18Ra or (rh) IL-18RP were loaded to HIS IK biosensors at a concentraion of 3 pg/ml followed by a first association of monospecific VHH SEEDbodies at 100 nM for 300 s. Subsequently, dissociation was measured for 100 s in kinetics buffer. Schemes generated via www.biorender.com.
Figure 7 presents data from a reporter assay suggesting that combinatorial reformatting of monospecific (1+0) SEEDbodies into strictly monovalent (1+1) bsAbs enables the identification of IL- 18 mimetics with attenuated capacities to trigger NFKB reporter activity on IL-18 reporter cells. HEK-Blue™ reporter cells were incubated with increasing conentrations of reformatted bsAbs or (rh) IL-18 and secreted embryonic alkaline phosphatase activity was monitored by determining the OD640. Reporter activity was normalized to maximal IL-18 readout. (A) Exemplary dose-dependent IL-18R agonism triggered by surrogate agonists IL18R_VHHa2pi5, IL18R_VHHa8pi5, IL18R_VHHa2pi7 and IL18R_VHHa8pi7 in direct comparison to (rh) IL-18. (B) Dose-dependent receptor agonism mediated by all 44 cytokine mimetics.
Figure 8 depicts data from an IFN-y release assay, showing that bispecific (1+1) surrogate agonists do not elicit IFN-y release on PBMCs isolated from healthy donors without the presence of low dose (rh) IL-12. IFN-y production of PBMCs stimulated with bsAbs at a fixed concentration of 100 nM or with (rh) IL-18 at 1 nM in the absence of (rh)IL-12. Graph dot plots of IFN-y release of eight different donors. IL18R_VHHaipi6 was used as negative control (given in red). Four leading candidates used for further characterization shown in green, purple, blue and orange. Figure 9 shows binding kinetics data obtained with bispecific (1+1) TOP4 surrogate agonists against receptor subunits IL-18Ra and IL-18RP. IL-18 mimetics were loaded on AHC biosensor tips at a concentration of 5 pg/ml. Interactions against both receptor subunits were measured at a concentration of 100 nM, 50 nM, 25 nM and 12.5 nM for 180 s followed by a dissociation in kinetics buffer for 300 s.
Figure 10 summarizes analytical size exclusion chromatography profiles of the generated surrogate agonist formats, indicating adequate purities following downstream purification. SEC-HPLC profiles of different formats as well as the corresponding target monomer peaks are shown. Absorbance at 214 nm was used for purity determination. (A) SEC profiles of all eight formats post protein A purification, indicating purities below 90% target species for IL18R_VHHa2pi5_E430G and IL18R_sdIgGa2pi5_E430G. (B) Analysis of IL18R_VHHa2pi5_E430G and IL18R_sdIgGa2pi5_E430G following second step SEC purification.
Figure 11 depicts data obtained by differential scanning fluorimetry to characterize the thermal unfolding of IL-18R agonistic bsAbs in different formats. Overlays of the melting curves for different formats of IL-18R agonists were recorded utilizing a temperature gradient from 20°C to 95°C at a slope of l°C/min. First derivatives of 350 nm / 330 nm curves are shown.
Figure 12 shows data obtained upon stimulation of PBMCs with the full dose-range of compound concentrations, indicating a strong hooking effect for (rh) IL 18 while for the different surrogate agonist formats it is not as pronounced. IFN-y read-out on PBMCs in the presence of low dose (rh) IL-12 (10 ng/ml). IL18R_VHHaipi6 as negative control shown in red was used at a fixed concentration of 1 pM. Mean values ± SEM of 13 independent experiments are shown.
Figure 13 shows data examining the binding of engineered tandem IL-18 mimetics. Such engineered tandem IL-18 mimetics exhibit strong binding to both receptor subunits in an avidity driven setting, (rh) IL-18Ra or (rh) IL-18RP were loaded onto HIS1K sensor tips at 5 pg/ml. A first association step was performed with different surrogate agonist formats at 100 nM, 33.3 nM and 11.1 nM for 180 s followed by a dissociation step in kinetics buffer fpr 300 s. Figure 14 shows biolayer interferometry (BLI) binding data for the binding of bispecific surrogate agonists to (rh)IL-18BP. Bispecific surrogate agonists do not bind to (rh)IL-18BP as determined, whereas (rh) IL-18BP binds to (rh)IL-18 with high affinities. BsAbs were loaded on AHC biosensor tips at 5 pg/ml. Subsequently, association was monitored using 1 pM IL- 18BP for 180 s, followed by dissociation in kinetics buffer for 180 s.
Figure 15 summarizes binding data showing that bispecific cytokine mimetics compete with (rh)IL-18 for binding to (rh)IL-18Ra. Surrogate agonists were loaded on AHC biosensor tips, followed by association using IL-18Ra at 200 nM for 300 s. Subsequently, a second association step was performed for 180 s using either (rh)IL-18 at 100 nM (red) or kinetics buffer (black).
SUMMARY OF SEQUENCES (in case of any difference between the below table and the cofiled WIPO ST.26 compliant sequence listing, the information of the below table shall prevail)
Figure imgf000021_0001
Figure imgf000022_0001
Figure imgf000023_0001
Figure imgf000024_0001
Figure imgf000025_0001
Figure imgf000026_0001
Figure imgf000027_0001
Figure imgf000028_0001
Figure imgf000029_0001
Figure imgf000030_0001
SEQ ID NO: 1 to 11 provide the amino acid sequences of VHH1 to VHH11 (corresponding to al to al 1 according to the present disclosure). The CDRs of these VHHs are provided in SEQ ID NO: 23 to 55.
SEQ ID NO: 12 to 22 provide the amino acid sequences of VHH12 to VHH22 (corresponding to pi2 to P22 according to the present disclosure). The CDRs of these VHHs are provided in SEQ ID NO: 56 to 88.
SEQ ID NO: 89 to 99 provide the amino acid sequences of SEED AG chains based on VHH1 to VHH11 (al to al 1) according to the present disclosure. SEQ ID NO: 100 to 110 provide the amino acid sequences of SEED GA chains based on VHH12 to VHH22 (P 12 to P22) according to the present disclosure.
DETAILED DESCRIPTION OF CERTAIN EMBODIMENTS
Although the present disclosure is described in detail above and below, it is to be understood that this disclosure is not limited to the particular methodologies, protocols and reagents described by the present disclosure, as these may vary. It is also to be understood that the terminology used herein is for the purpose of describing particular embodiments only, and is not intended to limit the scope of the present disclosure which will be limited only by the appended claims. Unless defined otherwise, all technical and scientific terms used herein have the same meanings as commonly understood by one of ordinary skill in the art.
In the following, certain elements of the present disclosure will be described in more detail, including the description of specific embodiments. However, the variously described examples and preferred embodiments should not be construed to limit the present disclosure to only the explicitly described embodiments. This description should be understood to support and encompass embodiments which combine the explicitly described embodiments with any number of the disclosed and/or preferred elements and in any manner. Furthermore, any permutations and combinations of all described elements in this application should be considered disclosed by the description of the present application except for where this leads to logical contradictions or the context indicates otherwise.
Unless defined otherwise herein, scientific and technical terms used in connection with the present disclosure shall have the meanings that are commonly understood by those of ordinary skill in the art. Generally, nomenclatures and techniques referred to in the present disclosure, e.g. nomenclatures and techniques of organic chemistry, chemical synthesis, biology, medicinal and pharmaceutical chemistry, medicine, pharmacology or toxicology, are those well-known and commonly used in the art. The methods and techniques of the present disclosure are generally performed according to conventional methods well-known in the art and as described in the references cited and discussed throughout the present disclosure unless otherwise indicated.
First aspect of the present disclosure (also referred to as "Embodiment 1"): According to a first aspect, the present disclosure relates to a VHH antibody domain or a fragment thereof, wherein
(a) said VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of one VHH selected from the group consisting of VHH1, VHH2, VHH3, VHH4, VHH5, VHH6, VHH8, VHH9, VHH10 and VHH11 as shown in the Table of CDRs;
(b) said VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 as defined in (a) with modification, wherein the modification is that the sequence of at least one of CDR1, CDR2 and CDR3 is humanized; or
(c) said VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 as defined in (a) with modification, wherein the modification is
- the replacement, addition or deletion of up to three amino acids in CDR1,
- the replacement, addition or deletion of up to three amino acids in CDR2 and/or
- the replacement, addition or deletion of up to three amino acids in CDR3;
Table of CDRs:
Figure imgf000031_0001
Figure imgf000032_0001
Figure imgf000033_0001
Figure imgf000034_0001
An "antibody" is a polypeptide substantially encoded by an immunoglobulin gene or immunoglobulin genes, or antigen binding fragment thereof, which specifically binds and recognizes an analyte (antigen). Immunoglobulin genes include the kappa, lambda, alpha, gamma, delta, epsilon and mu constant region genes, as well as the myriad immunoglobulin variable region genes.
In primates such as humans, a heavy and the light chain variable domain of an antibody combine to specifically bind the antigen. Generally, a naturally occurring primate (e.g., human) or murine immunoglobulin has heavy (H) chains and light (L) chains interconnected by disulfide bonds. There are two types of light chain, lambda ( ) and kappa (K). There are five main heavy chain classes (or isotypes) which determine the functional activity of an antibody molecule: IgM, IgD, IgG, IgA and IgE. Primate antibodies can be class switched.
Certain IgG antibodies from members of the camel and dromedary (Camelus bactrianus and Calelus dromaderius) family including new world members such as llama species (Lama paccos. Lama glama and Lama vicugna) of mammals as found in nature lack light chains, and are thus structurally distinct from the typical four chain quaternary structure having two heavy and two light chains, for antibodies from other animals. See PCT/EP93/02214 (WO 94/04678 published 3 March 1994). Such IgG subtypes of the llamas lack the light chains and the CHI domain and are called heavy chain antibodies. These naturally occurring camelid antibodies consisting of only a heavy chain are functional and stable in the absence of light chain. The antigen-binding site of these heavy chain antibodies is formed only by a single domain, referred to as "VHH" (Kbnning et al., 2017) or, used synonymously herein, "VHH antibody domain".
Each light and heavy chain of an antibody, contains constant domains and variable domains. References to "VH" or "VH" refer to the variable region of an immunoglobulin heavy chain, including that of an antibody fragment. References to "VL" or "VL" refer to the variable region of an immunoglobulin light chain, such as in a primate antibody. The variable domain of a heavy chain antibody is called VHH. The VHH is composed of only one polypeptide chain of 15 kDa and is considered the smallest known natural domain with full antigen-binding capacity. Light and heavy chain variable domains contain a "framework" region interrupted by three hypervariable regions, also called "complementarity determining regions" or "CDRs" (see, e.g., Kabat et al., Sequences of Proteins of Immunological Interest, U.S. Department of Health and Human Services, 1991). The sequences of the framework regions of different light or heavy chains are relatively conserved within a species. The framework region of an antibody, that is the combined framework regions of the constituent light and heavy chains, serves to position and align the CDRs in three-dimensional space. The CDRs are primarily responsible for antigen binding.
The CDRs are typically referred to as CDR1, CDR2, and CDR3 (from the N-terminus to C- terminus), and are also typically identified by the chain in which the particular CDR is located. Thus, a VH CDR3 is located in the variable domain of the heavy chain of the antibody in which it is found, whereas a VL CDR1 is the CDR1 from the variable domain of the light chain of the antibody in which it is found. Light chain CDRs are sometimes referred to as CDR LI, CDR L2, and CDR L3. Heavy chain CDRs are sometimes referred to as CDR Hl, CDR H2, and CDR H3. VHH monoclonal antibodies have only a heavy chain, and thus include only one CDR1, CDR2 and CDR3. Generally, the CDR3 is primarily responsible for antigen specificity.
A VHH includes in an N- to C- direction, the following structural regions: N - FR1 - CDR1 - FR2 - CDR2 - FR3 - CDR3 - FR4 - C, wherein FR denotes a framework region amino acid sequence and CDR denotes a complementary determining region amino acid sequence (see, e.g., Kabat et al., Sequences of Proteins of Immunological Interest, U.S. Department of Health and Human Services, 1991).
As used in the present disclosure, a "VHH antibody domain" refers to the domain formed by the complete VHH, including (in an N- to C- direction) N - FR1 - CDR1 - FR2 - CDR2 - FR3 - CDR3 - FR4 - C. A VHH antibody domain can be part of a larger molecule to which the VHH antibody domain is covalently linked. Alternative, a VHH antibody domain can be a molecule of its own that is not covalently linked to any other molecular structure.
Since resulting paratopes are devoid of light chains, sdAbs afford the benefit of multiple reformatting options in a ‘plug-and-play’ manner involving beads-on-string assemblies or facile combinations with existing Fab-based paratopes for the generation of bispecifics (Lipinski et al., 2023; Chanier and Chames, 2019). The extent of the framework region and CDRs have been defined (see, Kabat et al., Sequences of Proteins of Immunological Interest, U.S. Department of Health and Human Services, 1991). The CDRs of the heavy chain variable domain are located at residues 31-35 (CDR-H1), residues 50-65 (CDR-H2) and residues 95-102 (CDR-H3) according to the Kabat numbering system. In antibodies (such as primate antibodies) that include a light chain, such as a primate antibody, the CDRs of the light chain variable domain are located at residues 24-34 (CDR-L1), residues 50-56 (CDR-L2) and residues 89-97 (CDR-L3) according to the Kabat numbering system. The Kabat database is now maintained online. The location of camelid CDRs can also be determined (see, for example, Sircar et al., J. Immunol. 186: 6357-6367, 2011); a program to determine camelid antibody structure, the Rosetta Antibody program, is available on the internet.
A "monoclonal antibody" is an antibody produced by a single clone of B-lymphocytes or by a cell into which the heavy chain gene (and optionally a light chain gene, such as for a primate antibody) of a single antibody have been transfected. Monoclonal antibodies may be obtained using a variety of techniques known to those skilled in the art, including standard hybridoma technology (see e.g. Kohler and Milstein, Eur. J. Immunol. (1976), vol. 5, p. 511-519; Antibodies: A Laboratory Manual, 2nd edition (2014), editor Greenfield, Cold Spring Harbor Laboratory Press (USA); Immunobiology, 5th ed. (2001), editors Janeway et al., Garland Publishing (USA)) and e.g. expression from a eukaryotic host cell transfected with a DNA molecule coding for the homogeneous antibody or from a prokaryotic host cell transfected with a DNA molecule coding for the homogeneous antibody.
VHH antibody domains can be obtained by genetic engineering to yield a small protein having high affinity for a target, resulting in a low molecular weight antibody derived protein. See e.g. Sellmann et al., 2020; U.S. Patent No. 5,759,808, issued June 2, 1998; see also Dumoulin et al., (2003); Pleschberger et al., (2003); Cortez-Retamozo et al., (2002); and Lauwereys et al., (1998).
In some embodiments, the VHH molecules can be produced as recombinant monoclonal antibodies or antigen binding fragments in different expression platforms, avoiding the use of hybridomas and mice. VHH monoclonal antibodies can be humanized monoclonal antibodies. In some embodiments, monoclonal antibodies can be chimeric antibodies. Without being bound by theory, a VHH monoclonal antibody has a molecular weight approximately one-tenth that of a human IgG molecule, and the protein has a physical diameter of only a few nanometers.
One consequence of the small size is the ability of the VHH monoclonal antibody to bind to antigenic sites that are functionally invisible to larger antibody proteins, such that VHH monoclonal antibodies are useful as reagents to detect antigens that are otherwise cryptic using classical immunological techniques, and thus are of use as therapeutic agents. Thus, yet another consequence of small size is that a camelid VHH monoclonal antibody can inhibit as a result of binding to a specific site in a groove or narrow cleft of a target protein, and hence can serve in a capacity that more closely resembles the function of a classical low molecular weight drug than that of a classical antibody.
Without being bound by theory, low molecular weight and compact size further result in camelid VHH monoclonal antibodies being extremely thermostable, stable to extreme pH and to proteolytic digestion, and poorly antigenic. Further, these molecules can be fully expressed in prokaryotic cells such as E. coli and are expressed as fusion proteins with bacteriophage and are functional.
"Humanizing" an antib ody/antibody sequence, as used herein, refers to the process of "germlining" where a non-human (such as camelid, llama or synthetic) antibody sequence is adapted to be more similar to a human antibody sequence by replacing one or more individual amino acids with the corresponding amino acids of a human antibody sequence. Typically, as human antibody sequence will be selected that is particularly close (i.e. has a high degree of sequence homology) to the non-human sequence. Such a human antibody sequence can be identified e.g. by a BLAST search. The corresponding amino acids can then be identified by a pairwise sequence alignment between the selected human antibody sequence and the non- human antibody sequence to be humanized. After humanization, the humanized antibody still binds to the same antigen as the original non-human antibody before humanization. Humanized immunoglobulins can be constructed by means of genetic engineering. A VHH antibody domain is easily humanized based on the human VH domain, which has a sequence that is highly homologous to the sequence of the VHH antibody domain. Furthermore, a VHH sequence can be adapted to reduce sequence liabilities. This may comprise, e.g., replacing amino acids susceptible for glycosylation, deamination, oxidization or isomerization by exchanging the respective amino acid(s) in the VHH sequence with the corresponding amino acid in the closest human germline sequence or with another amino acid (e.g. alanine). Similarly, the hydrophobic patches at the cell surface can be reduced by exchanging the respective amino acid(s) with less hydrophobic amino acid(s). Again, the amino acid replacements are chosen such that after the adaption the VHH sequence still binds to the same antigen and with similar characteristics as the VHH sequence before adaption.
VHHs can be used as modular building blocks for generating multivalent and/or multispecific antibody constructs, whereby "multivalent" means that the construct encompasses more than one single domain antibody and "multispecific" means that it encompasses single domain antibodies of more than one binding specificity.
At some occasions, the present disclosure states that a certain protein/amino acid sequence A is a "fragment" of another protein/amino acid sequence B. This means that, compared to protein/amino acid B, the protein/amino acid sequence A lacks one or more amino acids at the N-terminus and/or one or more amino acids at the C-terminus. Whether a protein/amino acid sequence lacks, compared to another protein/amino acid sequence, one or more amino acids at the N-terminus and/or one or more amino acids at the C-terminus can for example readily be determined upon forming a sequence alignment e.g. with the BLAST family of programs.
As the skilled person understands, when the present disclosure refers to an "VHH antibody domain or a fragment thereof', said fragment is an antigen-binding fragment. Thus, said fragment binds to the same antigen as the "full-length" VHH antibody domain according to the present disclosure from which said fragment is derived (i.e. to IL-18Ra resp. IL-18RP). Preferably, said fragment of said VHH antibody domain is a C-terminal fragment. This means that compared to the "complete" VHH antibody domain sequence said fragment lacks amino acids at the N-terminus.
When the present disclosure indicates that a VHH antibody domain or fragment thereof "of one VHH selected from the group consisting of VHH1, VHH2 and VHH3 as shown in the Table of CDRs" (or a corresponding wording), this means that said VHH antibody domain comprises the combination of CDRs or either VHH1 or VHH2 or VHH3, but not a mixture of CDRs selected from different of the listed VHHs. Thus, said VHH antibody domain or fragment thereof includes e.g. the combination of CDR1, CDR2 and CDR3 of VHH1 (SEQ ID NO: 23, 24 and 25), the combination of CDR1, CDR2 and CDR3 of VHH2 (SEQ ID NO: 26, 27, and 28), or the combination of CDR1, CDR2 and CDR3 of VHH3 (SEQ ID NO: 29, 30, and 31) etc., but not the combination of CDR1 and CDR2 of VHH1 and CDR3 of VHH2 (SEQ ID NO: 23, 24 and 28).
When the present disclosure defines that a VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 as defined in e.g. (a) with modification, wherein the modification is e.g. that the sequence of at least one of CDR1, CDR2 and CDR3 is humanized, the skilled person is aware that this humanization exists compared to the corresponding sequence in the Table of CDRs that provides the combinations of CDR sequences without modification.
If the present disclosure indicates the existence of a modification which is "replacement, addition or deletion" of a certain number of amino acids (e.g. up to three), the skilled person understands that this is an individual replacement, addition or deletion of the indicated number of amino acids. Thus, the replaced, added or deleted amino acids may be at neighboring positions or at independent, isolated positions within the amino acid sequence. Moreover, as above, the skilled person is aware that this definition indicates the replacement, addition or deletion compared to the unmodified sequence in the Table of CDRs.
Embodiment 2: The VHH antibody domain or fragment thereof according to embodiment 1, wherein the modification in (b) is that the sequence of CDR1 and/or CDR2, but not the sequence of CDR3 is humanized.
Embodiment 3: The VHH antibody domain or fragment thereof according to any one of embodiments 1 or 2, wherein the modification in (b) is that the sequence of CDR1 is humanized, but not the sequence of CDR2 and CDR3.
Embodiment 4: The VHH antibody domain or fragment thereof according to any one of embodiments 1 or 2, wherein the modification in (b) is that the sequence of CDR2 is humanized, but not the sequence of CDR1 and CDR3. Embodiment 5: The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 4, wherein the modification in (b) is that the sequence of one, but not more than one of CDR1, CDR2 and CDR3 is humanized.
Embodiment 6: The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 5, wherein said humanization of said CDR(s) is by replacing at least one amino acid in the sequence of said CDR by the corresponding amino acid of a human VH domain.
Embodiment 7: The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 6, wherein said humanization of said CDR(s) is by replacing up to three amino acids in the sequence of said CDR by the corresponding amino acid of a human VH domain.
Embodiment 8: The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 6, wherein said humanization of said CDR(s) is by replacing up to three amino acids in the sequence of CDR1 and/or CDR2 and up to one amino acid in the sequence of CDR3 by the corresponding amino acid of a human VH domain.
Embodiment 9: The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 6, wherein said humanization of said CDR(s) is by replacing up to two amino acids in the sequence of said CDR by the corresponding amino acid of a human VH domain.
Embodiment 10: The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 6, wherein said humanization of said CDR(s) is by replacing up to two amino acids in the sequence of CDR1 and/or CDR2 and up to one amino acid in the sequence of CDR3 by the corresponding amino acid of a human VH domain.
Embodiment 11 : The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 10, wherein said humanization of said CDR(s) is by replacing one amino acid in the sequence of said CDR by the corresponding amino acid of a human VH domain.
Embodiment 12: The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 11, wherein the modification in (c) is - the replacement, addition or deletion of up to three amino acids in CDR1,
- the replacement, addition or deletion of up to three amino acids in CDR2 and/or
- the replacement, addition or deletion of up to one amino acid in CDR3.
Embodiment 13: The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 11, wherein the modification in (c) is
- the replacement, addition or deletion of up to two amino acids in CDR1,
- the replacement, addition or deletion of up to two amino acids in CDR2 and/or
- the replacement, addition or deletion of up to two amino acids in CDR3;
Embodiment 14: The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 11, wherein the modification in (c) is
- the replacement, addition or deletion of up to two amino acids in CDR1;
- the replacement, addition or deletion of up to two amino acids in CDR2; and/or
- the replacement, addition or deletion of up to one amino acid in CDR3.
Embodiment 15: The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 11, wherein the modification in (c) is
- the replacement, addition or deletion of up to two amino acids in CDR1 and/or
- the replacement, addition or deletion of up to two amino acids in CDR2; wherein the sequence of CDR3 is unmodified.
As a skilled person understands, the indication that the "sequence of CDR3 is unmodified" means that the sequence is unmodified compared to the sequence provided for CDR3 for the VHH at issue in the Table of CDRs.
Embodiment 16: The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 11, wherein the modification in (c) is
- the replacement, addition or deletion of up to two amino acids in CDR1, wherein the sequence of CDR2 and CDR3 is unmodified.
Embodiment 17: The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 11, wherein the modification in (c) is
- the replacement, addition or deletion of up to two amino acids in CDR2, wherein the sequence of CDR1 and CDR3 is unmodified.
Embodiment 18: The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 11, wherein the modification in (c) is
- the replacement, addition or deletion of up to one amino acid in CDR1;
- the replacement, addition or deletion of up to one amino acid in CDR2; and/or
- the replacement, addition or deletion of up to one amino acid in CDR3.
Embodiment 19: The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 11, wherein the modification in (c) is
- the replacement, addition or deletion of one amino acid in CDR1 and/or
- the replacement, addition or deletion of one amino acid in CDR2; wherein the sequence of CDR3 is unmodified.
Embodiment 20: The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 11, wherein the modification in (c) is
- the replacement, addition or deletion of one amino acid in CDR1, wherein the sequence of CDR2 and CDR3 is unmodified.
Embodiment 21 : The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 11, wherein the modification in (c) is
- the replacement, addition or deletion of one amino acid in CDR2, wherein the sequence of CDR1 and CDR3 is unmodified.
Embodiment 22: The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 21, wherein the modification in (c) comprises only the replacement, but not the addition or deletion of amino acids.
Embodiment 23: The VHH antibody domain or fragment thereof according to any one of embodiments 1 to 22, wherein said replacement is a conservative amino acid replacement.
As used herein, a "conservative amino acid replacement" refers to the replacement of an amino acid by another, biologically similar amino acid. Conservative replacements are not likely to change the shape or characteristics of a protein/amino acid sequence. Examples of conservative replacements include the replacement of one hydrophobic residue such as isoleucine, valine, leucine or methionine for another, or the substitution of one polar residue for another, such as the substitution of arginine for lysine, glutamic for aspartic acid, or glutamine for asparagine.
Second aspect of the present disclosure (also referred to as "Embodiment 24"): According to a second aspect, the present disclosure relates to a VHH antibody domain or a fragment thereof, wherein
(A) said VHH antibody domain comprises the amino acid sequence of a VHH selected from the group consisting of VHH1, VHH2, VHH3, VHH4, VHH5, VHH6, VHH8, VHH9, VHH10 and VHH11 as shown in the Table of VHH Sequences;
(B) said VHH antibody domain comprises a VHH sequence as defined in (A) with modification, wherein the modification is that said sequence is humanized;
(C) said VHH antibody domain comprises a VHH sequence as defined in (A) with modification, wherein the modification is the replacement, addition or deletion of up to 25 amino acids; or
(D) said VHH antibody domain comprises a VHH sequence that is at least 75% identical to a VHH sequence referred to in (A);
Table of VHH Sequences:
Figure imgf000043_0001
Figure imgf000044_0001
Figure imgf000045_0001
Third aspect of the present disclosure (also referred to as "Embodiment 25"): According to a third aspect, the present disclosure relates to a VHH antibody domain or a fragment thereof, wherein
(A) said VHH antibody domain consists of the amino acid sequence of a VHH selected from the group consisting of VHH1, VHH2, VHH3, VHH4, VHH5, VHH6, VHH8, VHH9, VHH10 and VHH11 as shown in the Table of VHH Sequences;
(B) said VHH antibody domain consists of a VHH sequence as defined in (A) with modification, wherein the modification is that said sequence is humanized;
(C) said VHH antibody domain consists of a VHH sequence as defined in (A) with modification, wherein the modification is the replacement, addition or deletion of up to 25 amino acids; or
(D) said VHH antibody domain consists of a VHH sequence that is at least 75% identical to a VHH sequence referred to in (A). To the second and third aspects of the present disclosure and the embodiments referring thereto, the same explanations and definitions apply accordingly as for the first aspect of the present disclosure and the embodiments referring thereto.
As the skilled person is aware, if the present disclosure indicates that a VHH antibody domain comprises e.g. "the VHH sequence of a VHH selected from the group consisting of VHH1, VHH2, VHH3, VHH4, VHH5, VHH6, VHH8, VHH9, VHH10 and VHH11 as shown in the Table of VHH Sequences", this means that said VHH antibody domain comprises one and (not multiple or all) of the sequences listed in the Table of VHH Sequences.
Thus, if the present disclosure indicates that a VHH antibody domain or fragment thereof comprises/consists e.g. of a VHH sequence as defined in (A) "with modification, wherein the modification is that said sequence is humanized", the skilled person is aware that this means that this humanization exists compared to the corresponding sequence in the Table of VHH Sequences that provides the sequences without modification.
If the present disclosure states that a certain sequence A "is at least x % identical" to another sequence B, this is synonymous to the statement that sequence A "has x % identity" to sequence B. The statement reflects a relationship between the two polypeptide sequences A and B determined by comparing the sequences. In general, identity refers to an exact amino acid to amino acid correspondence of the two polypeptide sequences, respectively, over the length of the sequences being compared. For sequences where there is not an exact correspondence, a percentage to which the two sequences are identical may be determined. In general, the two sequences to be compared are aligned to give a maximum correlation between the sequences. This may include inserting "gaps" in either one or both sequences, to enhance the degree of alignment. A % identity may be determined over the whole length of each of the sequences being compared (so-called global alignment), that is particularly suitable for sequences of the same or very similar length, or over shorter, defined lengths (so-called local alignment), that is more suitable for sequences of unequal length.
Methods for comparing the identity of two or more sequences are well known in the art. Thus, for instance, programs available in the Wisconsin Sequence Analysis Package, version 9.1 (Devereux J et al., 1984), for example the programs BESTFIT and GAP, may be used to determine the % identity between two polynucleotides and the % identity between two polypeptide sequences. BESTFIT uses the "local homology" algorithm of Smith and Waterman (1981) and finds the best single region of similarity between two sequences. Other programs for determining identity sequences are also known in the art, for instance the BLAST family of programs (Altschul S F et al, 1990, Altschul S F et al, 1997, accessible through the home page of the NCBI at www.ncbi.nlm.nih.gov) and FASTA (Pearson WR, 1990). Preferably, % identity according to the present disclosure is determined according to the BLAST family of programs (Altschul S F et al, 1990, Altschul S F et al, 1997, accessible through the home page of the NCBI at www.ncbi.nlm.nih.gov).
Embodiment 26: The VHH antibody domain or fragment thereof according to any one of embodiments 24 or 25, wherein said fragment of said VHH antibody domain comprises at least 75% of the amino acids of the sequence of said VHH antibody domain. As the skilled person understands, this means that that fragment lacks up to a quarter of the total number of amino acids of said VHH antibody domain, wherein, compared to the "complete" VHH antibody domain sequence said amino acids are lacking either at the N-terminus or at the C-terminus.
Embodiment 27: The VHH antibody domain or fragment thereof according to any one of embodiments 24 or 25, wherein said fragment of said VHH antibody domain comprises at least 80% of the amino acids of the sequence of said VHH antibody domain.
Embodiment 28: The VHH antibody domain or fragment thereof according to any one of embodiments 24 or 25, wherein said fragment of said VHH antibody domain comprises at least 85% of the amino acids of the sequence of said VHH antibody domain.
Embodiment 29: The VHH antibody domain or fragment thereof according to any one of embodiments 24 or 25, wherein said fragment of said VHH antibody domain comprises at least 90% of the amino acids of the sequence of said VHH antibody domain.
Embodiment 30: The VHH antibody domain or fragment thereof according to any one of embodiments 24 or 25, wherein said fragment of said VHH antibody domain comprises at least 95% of the amino acids of the sequence of said VHH antibody domain. 973 Embodiment 31 : The VHH antibody domain or fragment thereof according to any one of
974 embodiments 24 or 25, wherein said fragment of said VHH antibody domain comprises at least
975 98% of the amino acids of the sequence of said VHH antibody domain.
976
977 Embodiment 32: The VHH antibody domain or fragment thereof according to any one of
978 embodiments 24 or 25, wherein said fragment of said VHH antibody domain comprises at least
979 99% of the amino acids of the sequence of said VHH antibody domain.
980
981 Embodiment 33: The VHH antibody domain or fragment thereof according to any one of
982 embodiments 24 to 32, wherein said fragment of said VHH antibody domain comprises the
983 complementarity determining regions CDR1, CDR2 and CDR3.
984
985 Embodiment 34: The VHH antibody domain or fragment thereof according to any one of
986 embodiments 24 to 33, wherein said fragment of said VHH antibody domain comprises at least
987 the sequence from the N-terminus of CDR1 to the C-terminus of CDR3 of said VHH antibody
988 domain.
989
990 Embodiment 35: The VHH antibody domain or fragment thereof according to any one of
991 embodiments 24 to 34, wherein in (A) said fragment of said VHH antibody domain comprises
992 all the complementarity determining regions (CDRs) of said VHH antibody domain.
993
994 Embodiment 36: The VHH antibody domain or fragment thereof according to any one of
995 embodiments 24 to 35, wherein in (B) said humanization of said sequence is by replacing at
996 least one amino acid of said sequence by the corresponding amino acid of a human VH (variable
997 heavy) domain.
998
999 Embodiment 37: The VHH antibody domain or fragment thereof according to any one of
1000 embodiments 24 to 36, wherein in (B) said humanization of said sequence is by (individually)
1001 replacing up to 25 amino acids of said sequence by the corresponding amino acids of a human
1002 VH domain.
1003
1004 As the skilled person understands, if the present disclosure refers to the replacement of an amino
1005 acid of a certain sequence/domain A by the "corresponding" amino acid of a certain
1006 sequence/domain B, this designates that said amino acid of sequence/domain A is replaced by 1007 the amino acid in sequence/domain B that in an alignment of the two sequences aligns with said
1008 amino acid of sequence/domain A.
1009
1010 Embodiment 38: The VHH antibody domain or fragment thereof according to any one of
1011 embodiments 24 to 36, wherein in (B) said humanization of said sequence is by replacing up to
1012 20 amino acids of said sequence by the corresponding amino acids of a human VH domain.
1013
1014 Embodiment 39: The VHH antibody domain or fragment thereof according to any one of
1015 embodiments 24 to 36, wherein in (B) said humanization of said sequence is by replacing up to
1016 15 amino acids of said sequence by the corresponding amino acids of a human VH domain.
1017
1018 Embodiment 40: The VHH antibody domain or fragment thereof according to any one of
1019 embodiments 24 to 36, wherein in (B) said humanization of said sequence is by replacing up to
1020 10 amino acids of said sequence by the corresponding amino acids of a human VH domain.
1021
1022 Embodiment 41 : The VHH antibody domain or fragment thereof according to any one of
1023 embodiments 24 to 36, wherein in (B) said humanization of said sequence is by replacing up to
1024 5 amino acids of said sequence by the corresponding amino acids of a human VH domain.
1025
1026 Embodiment 42: The VHH antibody domain or fragment thereof according to any one of
1027 embodiments 24 to 36, wherein in (B) said humanization of said sequence is by replacing up to
1028 3 amino acids of said sequence by the corresponding amino acids of a human VH domain.
1029
1030 Embodiment 43: The VHH antibody domain or fragment thereof according to any one of
1031 embodiments 24 to 36, wherein in (B) said humanization of said sequence is by replacing up to
1032 2 amino acids of said sequence by the corresponding amino acids of a human VH domain.
1033
1034 Embodiment 44: The VHH antibody domain or fragment thereof according to any one of
1035 embodiments 24 to 36, wherein in (B) said humanization of said sequence is by replacing one
1036 amino acid of said sequence by the corresponding amino acid of a human VH domain.
1037
1038 Embodiment 45: The VHH antibody domain or fragment thereof according to any one of
1039 embodiments 24 to 44, wherein in (B) said humanization is within the framework regions of
1040 said VHH antibody domain and/or within the CDRs of said VHH antibody domain. 1041
1042 Embodiment 46: The VHH antibody domain or fragment thereof according to any one of
1043 embodiments 24 to 44, wherein in (B) said humanization is within the framework regions of
1044 said VHH antibody domain, but not within the CDRs of said VHH antibody domain.
1045
1046 Embodiment 47: The VHH antibody domain or fragment thereof according to any one of
1047 embodiments 24 to 36, wherein in (B) said humanization is within the CDRs of said VHH
1048 antibody domain, but not within the framework regions of said VHH antibody domain.
1049
1050 Embodiment 48: The VHH antibody domain or fragment thereof according to any one of
1051 embodiments 24 to 45 or 47, wherein in (B) said humanization within the CDRs of said VHH
1052 antibody domain is within CDR1, CDR2 and/or CDR3.
1053
1054 Embodiment 49: The VHH antibody domain or fragment thereof according to any one of
1055 embodiments 24 to 45 or 47 to 48, wherein in (B) said humanization within the CDRs of said
1056 VHH antibody domain is within CDR1 and/or CDR2.
1057
1058 Embodiment 50: The VHH antibody domain or fragment thereof according to any one of
1059 embodiments 24 to 45 or 47 to 49, wherein in (B) said humanization within the CDRs of said
1060 VHH antibody domain is within CDR1.
1061
1062 Embodiment 51: The VHH antibody domain or fragment thereof according to any one of
1063 embodiments 24 to 45 or 47 to 50, wherein in (B) said humanization within the CDRs of said
1064 VHH antibody domain is within CDR2.
1065
1066 Embodiment 52: The VHH antibody domain or fragment thereof according to any one of
1067 embodiments 24 to 51, wherein in (B) said humanization within the CDRs of said VHH
1068 antibody domain is not within CDR3.
1069
1070 Embodiment 53: The VHH antibody domain or fragment thereof according to any one of
1071 embodiments 24 to 52, wherein in (C) the modification is the replacement, addition or deletion
1072 of up to 20 amino acids.
1073 1074 Embodiment 54: The VHH antibody domain or fragment thereof according to any one of
1075 embodiments 24 to 52, wherein in (C) the modification is the replacement, addition or deletion
1076 of up to 15 amino acids.
1077
1078 Embodiment 55: The VHH antibody domain or fragment thereof according to any one of
1079 embodiments 24 to 52, wherein in (C) the modification is the replacement, addition or deletion
1080 of up to 10 amino acids.
1081
1082 Embodiment 56: The VHH antibody domain or fragment thereof according to any one of
1083 embodiments 24 to 52, wherein in (C) the modification is the replacement, addition or deletion
1084 of up to 5 amino acids.
1085
1086 Embodiment 57: The VHH antibody domain or fragment thereof according to any one of
1087 embodiments 24 to 52, wherein in (C) the modification is the replacement, addition or deletion
1088 of up to 3 amino acids.
1089
1090 Embodiment 58: The VHH antibody domain or fragment thereof according to any one of
1091 embodiments 24 to 52, wherein in (C) the modification is the replacement, addition or deletion
1092 of up to 2 amino acids.
1093
1094 Embodiment 59: The VHH antibody domain or fragment thereof according to any one of
1095 embodiments 24 to 52, wherein in (C) the modification is the replacement, addition or deletion
1096 of one amino acid.
1097
1098 Embodiment 60: The VHH antibody domain or fragment thereof according to any one of
1099 embodiments 24 to 59, wherein the modification in (C) comprises only the replacement, but not
1100 the addition or deletion of amino acids.
1101
1102 Embodiment 61 : The VHH antibody domain or fragment thereof according to any one of
1103 embodiments 24 to 60, wherein in (A) said VHH antibody domain or fragment thereof
1104 comprises the complementarity determining regions CDR1, CDR2 and CDR3 of one VHH
1105 selected from the group consisting of VHH1, VHH2, VHH3, VHH4, VHH5, VHH6, VHH8,
1106 VHH9, VHH10 and VHH11 as shown in the Table of CDRs.
1107 1108 Embodiment 62: The VHH antibody domain or fragment thereof according to any one of
1109 embodiments 24 to 61, wherein in (B) to (D)
1110 (a) said VHH antibody domain or fragment thereof comprises the complementarity
1111 determining regions CDR1, CDR2 and CDR3 of one VHH selected from the group
1112 consisting of VHH1, VHH2, VHH3, VHH4, VHH5, VHH6, VHH8, VHH9, VHH10
1113 and VHH11 as shown in the Table of CDRs;
1114 (b) said VHH antibody domain or fragment thereof comprises the complementarity
1115 determining regions CDR1, CDR2 and CDR3 as defined in (a) with modification,
1116 wherein the modification is that the sequence of at least one of CDR1, CDR2 and
1117 CDR3 is humanized;
1118 (c) said VHH antibody domain or fragment thereof comprises the complementarity
1119 determining regions CDR1, CDR2 and CDR3 as defined in (a) with modification,
1120 wherein the modification is
1121 - the replacement, addition or deletion of up to three amino acids in CDR1,
1122 - the replacement, addition or deletion of up to three amino acids in CDR2
1123 and/or
1124 - the replacement, addition or deletion of up to three amino acids in CDR3.
1125
1126 Embodiment 63 : The VHH antibody domain or fragment thereof according to embodiment 62,
1127 wherein the modification in (b) is that the sequence of CDR1 and/or CDR2, but not the sequence
1128 of CDR3 is humanized.
1129
1130 Embodiment 64: The VHH antibody domain or fragment thereof according to any one of
1131 embodiments 62 or 63, wherein the modification in (b) is that the sequence of CDR1 is
1132 humanized, but not the sequence of CDR2 and CDR3.
1133
1134 Embodiment 65: The VHH antibody domain or fragment thereof according to any one of
1135 embodiments 62 or 63, wherein the modification in (b) is that the sequence of CDR2 is
1136 humanized, but not the sequence of CDR1 and CDR3.
1137
1138 Embodiment 66: The VHH antibody domain or fragment thereof according to any one of
1139 embodiments 62 to 65, wherein the modification in (b) is that the sequence of one, but not more
1140 than one of CDR1, CDR2 and CDR3 is humanized.
1141 1142 Embodiment 67: The VHH antibody domain or fragment thereof according to any one of
1143 embodiments 62 to 66, wherein said humanization of said CDR(s) is by replacing at least one
1144 amino acid in the sequence of said CDR by the corresponding amino acid of a human VH
1145 domain.
1146
1147 Embodiment 68: The VHH antibody domain or fragment thereof according to any one of
1148 embodiments 62 to 67, wherein said humanization of said CDR(s) is by replacing up to three
1149 amino acids in the sequence of said CDR by the corresponding amino acid of a human VH
1150 domain.
1151
1152 Embodiment 69: The VHH antibody domain or fragment thereof according to any one of
1153 embodiments 62 to 67, wherein said humanization of said CDR(s) is by replacing up to three
1154 amino acids in the sequence of CDR1 and/or CDR2 and up to one amino acid in the sequence
1155 of CDR3 by the corresponding amino acid of a human VH domain.
1156
1157 Embodiment 70: The VHH antibody domain or fragment thereof according to any one of
1158 embodiments 62 to 67, wherein said humanization of said CDR(s) is by replacing up to two
1159 amino acids in the sequence of said CDR by the corresponding amino acid of a human VH
1160 domain.
1161
1162 Embodiment 71 : The VHH antibody domain or fragment thereof according to any one of
1163 embodiments 62 to 67, wherein said humanization of said CDR(s) is by replacing up to two
1164 amino acids in the sequence of CDR1 and/or CDR2 and up to one amino acid in the sequence
1165 of CDR3 by the corresponding amino acid of a human VH domain.
1166
1167 Embodiment 72: The VHH antibody domain or fragment thereof according to any one of
1168 embodiments 62 to 71, wherein said humanization of said CDR(s) is by replacing one amino
1169 acid in the sequence of said CDR by the corresponding amino acid of a human VH domain.
1170
1171 Embodiment 73: The VHH antibody domain or fragment thereof according to any one of
1172 embodiments 62 to 72, wherein the modification in (c) is
1173 - the replacement, addition or deletion of up to three amino acids in CDR1,
1174 - the replacement, addition or deletion of up to three amino acids in CDR2 and/or
1175 - the replacement, addition or deletion of up to two amino acids in CDR3. 1176
1177 Embodiment 74: The VHH antibody domain or fragment thereof according to any one of
1178 embodiments 62 to 72, wherein the modification in (c) is
1179 - the replacement, addition or deletion of up to three amino acids in CDR1,
1180 - the replacement, addition or deletion of up to three amino acids in CDR2 and/or
1181 - the replacement, addition or deletion of up to one amino acid in CDR3.
1182
1183 Embodiment 75: The VHH antibody domain or fragment thereof according to any one of
1184 embodiments 62 to 72, wherein the modification in (c) is
1185 - the replacement, addition or deletion of up to three amino acids in CDR1, and/or
1186 - the replacement, addition or deletion of up to three amino acids in CDR2,
1187 wherein the sequence of CDR3 is unmodified.
1188
1189 Embodiment 76: The VHH antibody domain or fragment thereof according to any one of
1190 embodiments 62 to 72, wherein the modification in (c) is
1191 - the replacement, addition or deletion of up to two amino acids in CDR1,
1192 - the replacement, addition or deletion of up to two amino acids in CDR2 and/or
1193 - the replacement, addition or deletion of up to two amino acids in CDR3;
1194
1195 Embodiment 77: The VHH antibody domain or fragment thereof according to any one of
1196 embodiments 62 to 72, wherein the modification in (c) is
1197 - the replacement, addition or deletion of up to two amino acids in CDR1;
1198 - the replacement, addition or deletion of up to two amino acids in CDR2; and/or
1199 - the replacement, addition or deletion of up to one amino acid in CDR3.
1200
1201 Embodiment 78: The VHH antibody domain or fragment thereof according to any one of
1202 embodiments 62 to 72, wherein the modification in (c) is
1203 - the replacement, addition or deletion of up to two amino acids in CDR1 and/or
1204 - the replacement, addition or deletion of up to two amino acids in CDR2;
1205 wherein the sequence of CDR3 is unmodified.
1206
1207 As the skilled person is aware, "unmodified" means unmodified compared to the sequence in
1208 the Table of CDRs.
1209 1210 Embodiment 79: The VHH antibody domain or fragment thereof according to any one of
1211 embodiments 62 to 72, wherein the modification in (c) is
1212 - the replacement, addition or deletion of up to two amino acids in CDR1,
1213 wherein the sequence of CDR2 and CDR3 is unmodified.
1214
1215 Embodiment 80: The VHH antibody domain or fragment thereof according to any one of
1216 embodiments 62 to 72, wherein the modification in (c) is
1217 - the replacement, addition or deletion of up to two amino acids in CDR2,
1218 wherein the sequence of CDR1 and CDR3 is unmodified.
1219
1220 Embodiment 81 : The VHH antibody domain or fragment thereof according to any one of
1221 embodiments 62 to 72, wherein the modification in (c) is
1222 - the replacement, addition or deletion of up to one amino acid in CDR1;
1223 - the replacement, addition or deletion of up to one amino acid in CDR2; and/or
1224 - the replacement, addition or deletion of up to one amino acid in CDR3.
1225
1226 Embodiment 82: The VHH antibody domain or fragment thereof according to any one of
1227 embodiments 62 to 72, wherein the modification in (c) is
1228 - the replacement, addition or deletion of one amino acid in CDR1 and/or
1229 - the replacement, addition or deletion of one amino acid in CDR2;
1230 wherein the sequence of CDR3 is unmodified.
1231
1232 Embodiment 83: The VHH antibody domain or fragment thereof according to any one of
1233 embodiments 62 to 72, wherein the modification in (c) is
1234 - the replacement, addition or deletion of one amino acid in CDR1,
1235 wherein the sequence of CDR2 and CDR3 is unmodified.
1236
1237 Embodiment 84: The VHH antibody domain or fragment thereof according to any one of
1238 embodiments 62 to 72, wherein the modification in (c) is
1239 - the replacement, addition or deletion of one amino acid in CDR2,
1240 wherein the sequence of CDR1 and CDR3 is unmodified.
1241 1242 Embodiment 85: The VHH antibody domain or fragment thereof according to any one of
1243 embodiments 62 to 84, wherein the modification in (c) comprises only the replacement, but not
1244 the addition or deletion of amino acids.
1245
1246 Embodiment 86: The VHH antibody domain or fragment thereof according to any one of
1247 embodiments 62 to 85, wherein said replacement is a conservative amino acid replacement.
1248
1249 Embodiment 87: The VHH antibody domain or fragment thereof according to any one of
1250 embodiments 1 to 86, wherein said fragment consists of at least 100 amino acids.
1251
1252 Embodiment 88: The VHH antibody domain or fragment thereof according to any one of
1253 embodiments 1 to 86, wherein said fragment consists of at least 105 amino acids.
1254
1255 Embodiment 89: The VHH antibody domain or fragment thereof according to any one of
1256 embodiments 1 to 86, wherein said fragment consists of at least 110 amino acids.
1257
1258 Embodiment 90: The VHH antibody domain or fragment thereof according to any one of
1259 embodiments 1 to 86, wherein said fragment consists of at least 115 amino acids.
1260
1261 Embodiment 91 : The VHH antibody domain or fragment thereof according to any one of
1262 embodiments 1 to 90, wherein said VHH antibody domain is an anti-IL-18Ra VHH antibody
1263 domain.
1264
1265 Embodiment 92: The VHH antibody domain or fragment thereof according to any one of
1266 embodiments 1 to 91, wherein said VHH antibody domain is specific for IL-18Ra.
1267
1268 Embodiment 93: The VHH antibody domain or fragment thereof according to any one of
1269 embodiments 1 to 92, wherein said VHH antibody domain or fragment thereof binds to IL-
1270 18Ra.
1271
1272 Embodiment 94: The VHH antibody domain or fragment thereof according to any one of
1273 embodiments 1 to 93, wherein said VHH antibody domain or fragment thereof binds
1274 specifically to IL-18Ra.
1275 1276 Embodiment 95: The VHH antibody domain or fragment thereof according to any one of
1277 embodiments 1 to 94, wherein said VHH antibody domain or fragment thereof does not bind to
1278 IL-18RP.
1279
1280 Embodiment 96: The VHH antibody domain or fragment thereof according to any one of
1281 embodiments 1 to 95, wherein said VHH antibody domain or fragment thereof is capable of
1282 specifically binding to IL-18Ra ECD.
1283
1284 In some embodiments, if the present disclosure states that a first molecule/molecular group (e.g.
1285 an antibody/antibody component) "is capable of specifically binding"/" specifically binds" to a
1286 second molecule/molecular group (e.g. an antigen of interest), this means that the first
1287 molecule/molecular group (in this example the antibody) binds to said second
1288 molecule/molecular group (in this example the antigen of interest) with an affinity that is at
1289 least ten-fold greater than its affinity for other molecules/molecular groups, in particular other
1290 molecule/molecular group in the human body (in this example at least ten-fold greater than its
1291 affinity for binding to non-specific antigens (e.g., BSA, casein) other than said antigen of
1292 interest (or closely related antigens)). In a preferred embodiment, a first molecule/molecular
1293 group (e.g. an antibody/antibody component) that "specifically binds" to a second
1294 molecule/molecular group (e.g. an antigen of interest) binds to said antigen with an affinity that
1295 is at least 100-fold greater than its affinity for other molecules/molecular groups, in particular
1296 other molecule/molecular group in the human body (in this example at least 100-fold greater
1297 than its affinity for binding to non-specific antigens other than said antigen of interest (or
1298 closely related antigens)). Typically said binding will be determined under physiological
1299 conditions. A first molecule/molecular group that "specifically binds" to a second
1300 molecule/molecular group may bind to that second molecule/molecular group with a KD of
1301 1 * 10'7 M or stronger.
1302
1303 Embodiment 97: The VHH antibody domain or fragment thereof according to any one of
1304 embodiments 1 to 96, wherein said VHH antibody domain or fragment thereof binds to
1305 recombinant human IL-18Ra ECD with a KD of 1x1 O'6 M or stronger.
1306
1307 Embodiment 98: The VHH antibody domain or fragment thereof according to any one of
1308 embodiments 1 to 97, wherein said VHH antibody domain or fragment thereof binds to
1309 recombinant human IL-18Ra ECD with a KD of 1x1 O'7 M or stronger. 1310
1311 Embodiment 99: The VHH antibody domain or fragment thereof according to any one of
1312 embodiments 1 to 97, wherein said VHH antibody domain or fragment thereof binds to
1313 recombinant human IL-18Ra ECD with a KD of 5x1 O'8 M or stronger.
1314
1315 Embodiment 100: The VHH antibody domain or fragment thereof according to any one of
1316 embodiments 1 to 97, wherein said VHH antibody domain or fragment thereof binds to
1317 recombinant human IL-18Ra ECD with a KD of 1.5x1 O'8 M or stronger.
1318
1319 Embodiment 101 : The VHH antibody domain or fragment thereof according to any one of
1320 embodiments 1 to 96, wherein said VHH antibody domain or fragment thereof binds to
1321 recombinant human IL-18Ra ECD with a KD of 1x1 O'8 M or stronger.
1322
1323 Embodiment 102: The VHH antibody domain or fragment thereof according to any one of
1324 embodiments 1 to 96, wherein said VHH antibody domain or fragment thereof binds to
1325 recombinant human IL-18Ra ECD with a KD of 5x1 O'9 M or stronger.
1326
1327 Embodiment 103: The VHH antibody domain or fragment thereof according to any one of
1328 embodiments 1 to 96, wherein said VHH antibody domain or fragment thereof binds to
1329 recombinant human IL-18Ra ECD with a KD of 1x1 O'9 M or stronger.
1330
1331 Embodiment 104: The VHH antibody domain or fragment thereof according to any one of
1332 embodiments 1 to 103, wherein said fragment of said VHH antibody domain binds to
1333 recombinant human IL-18Ra ECD with at least 90% of the affinity (as determined by KD value)
1334 with which said VHH antibody domain binds to recombinant human IL-18Ra ECD.
1335
1336 Embodiment 105: The VHH antibody domain or fragment thereof according to any one of
1337 embodiments 1 to 104, wherein said fragment of said VHH antibody domain binds to IL-18Ra
1338 ECD with an affinity (as determined from the KD value) that is at least equal to the affinity
1339 with which VHH2 (SEQ ID NO: 2) binds to IL-18Ra ECD or stronger.
1340
1341 Such binding can be determined by in vitro binding experiments as described in Example 1
1342 below (by biolayer interferometry).
1343 1344 Embodiment 106: The VHH antibody domain or fragment thereof according to any one of
1345 embodiments 1 to 23 or 62 to 105, wherein in (b) and (c) the VHH antibody domain or fragment
1346 thereof binds to recombinant human IL-18Ra ECD with an affinity (KD value) that is by not
1347 more than a factor of 10 weaker than the binding of the corresponding VHH antibody domain
1348 without modification.
1349
1350 Embodiment 107: The VHH antibody domain or fragment thereof according to any one of
1351 embodiments 1 to 23 or 62 to 105, wherein in (b) and (c) the VHH antibody domain or fragment
1352 thereof binds to recombinant human IL-18Ra ECD with an affinity (KD value) that is by not
1353 more than a factor of 5 weaker than the binding of the corresponding VHH antibody domain
1354 without modification.
1355
1356 Embodiment 108: The VHH antibody domain or fragment thereof according to any one of
1357 embodiments 1 to 23 or 62 to 105, wherein in (b) and (c) the VHH antibody domain or fragment
1358 thereof binds to recombinant human IL-18Ra ECD with an affinity (KD value) that is by not
1359 more than a factor of 2 weaker than the binding of the corresponding VHH antibody domain
1360 without modification.
1361
1362 Embodiment 109: The VHH antibody domain or fragment thereof according to any one of
1363 embodiments 1 to 23 or 62 to 105, wherein in (b) and (c) the VHH antibody domain or fragment
1364 thereof binds to recombinant human IL-18Ra ECD with an affinity (KD value) that is by not
1365 more than a factor of 1.5 weaker than the binding of the corresponding VHH antibody domain
1366 without modification.
1367
1368 Embodiment 110: The VHH antibody domain or fragment thereof according to any one of
1369 embodiments 1 to 23 or 62 to 109, wherein in (b) and (c) the VHH antibody domain or fragment
1370 thereof binds to recombinant human IL-18Ra ECD with an affinity (KD value) that is by not
1371 more than a factor of 10 stronger than the binding of the corresponding VHH antibody domain
1372 without modification.
1373
1374 Embodiment 111 : The VHH antibody domain or fragment thereof according to any one of
1375 embodiments 1 to 23 or 62 to 109, wherein in (b) and (c) the VHH antibody domain or fragment
1376 thereof binds to recombinant human IL-18Ra ECD with an affinity (KD value) that is by not 1377 more than a factor of 5 stronger than the binding of the corresponding VHH antibody domain
1378 without modification.
1379
1380 Embodiment 112: The VHH antibody domain or fragment thereof according to any one of
1381 embodiments 1 to 23 or 62 to 109, wherein in (b) and (c) the VHH antibody domain or fragment
1382 thereof binds to recombinant human IL-18Ra ECD with an affinity (KD value) that is by not
1383 more than a factor of 2 stronger than the binding of the corresponding VHH antibody domain
1384 without modification.
1385
1386 Embodiment 113: The VHH antibody domain or fragment thereof according to any one of
1387 embodiments 1 to 23 or 62 to 109, wherein in (b) and (c) the VHH antibody domain or fragment
1388 thereof binds to recombinant human IL-18Ra ECD with an affinity (KD value) that is by not
1389 more than a factor of 1.5 stronger than the binding of the corresponding VHH antibody domain
1390 without modification.
1391
1392 Embodiment 114: The VHH antibody domain or fragment thereof according to any one of
1393 embodiments 24 to 113, wherein in (B) and (C) the VHH antibody domain binds to recombinant
1394 human IL-18Ra ECD with an affinity (KD value) that is by not more than a factor of 10 weaker
1395 than the binding of the corresponding VHH antibody domain without modification.
1396
1397 Embodiment 115: The VHH antibody domain or fragment thereof according to any one of
1398 embodiments 24 to 113, wherein in (B) and (C) the VHH antibody domain binds to recombinant
1399 human IL-18Ra ECD with an affinity (KD value) that is by not more than a factor of 5 weaker
1400 than the binding of the corresponding VHH antibody domain without modification.
1401
1402 Embodiment 116: The VHH antibody domain or fragment thereof according to any one of
1403 embodiments 24 to 113, wherein in (B) and (C) the VHH antibody domain binds to recombinant
1404 human IL-18Ra ECD with an affinity (KD value) that is by not more than a factor of 2 weaker
1405 than the binding of the corresponding VHH antibody domain without modification.
1406
1407 Embodiment 117: The VHH antibody domain or fragment thereof according to any one of
1408 embodiments 24 to 113, wherein in (B) and (C) the VHH antibody domain binds to recombinant
1409 human IL-18Ra ECD with an affinity (KD value) that is by not more than a factor of 1.5 weaker
1410 than the binding of the corresponding VHH antibody domain without modification. 1411
1412 Embodiment 118: The VHH antibody domain or fragment thereof according to any one of
1413 embodiments 24 to 117, wherein in (B) and (C) the VHH antibody domain binds to recombinant
1414 human IL- 18Ra ECD with an affinity (KD value) that i s by not more than a factor of 10 stronger
1415 than the binding of the corresponding VHH antibody domain without modification.
1416
1417 Embodiment 119: The VHH antibody domain or fragment thereof according to any one of
1418 embodiments 24 to 117, wherein in (B) and (C) the VHH antibody domain binds to recombinant
1419 human IL-18Ra ECD with an affinity (KD value) that is by not more than a factor of 5 stronger
1420 than the binding of the corresponding VHH antibody domain without modification.
1421
1422 Embodiment 120: The VHH antibody domain or fragment thereof according to any one of
1423 embodiments 24 to 117, wherein in (B) and (C) the VHH antibody domain binds to recombinant
1424 human IL-18Ra ECD with an affinity (KD value) that is by not more than a factor of 2 stronger
1425 than the binding of the corresponding VHH antibody domain without modification.
1426
1427 Embodiment 121 : The VHH antibody domain or fragment thereof according to any one of
1428 embodiments 24 to 117, wherein in (B) and (C) the VHH antibody domain binds to recombinant
1429 human IL-18Ra ECD with an affinity (KD value) that is by not more than a factor of 1.5
1430 stronger than the binding of the corresponding VHH antibody domain without modification.
1431
1432 Embodiment 122: The VHH antibody domain or fragment thereof according to any one of
1433 embodiments 24 to 121, wherein in (D) the affinity (KD value) of the binding of the VHH
1434 antibody domain to recombinant human IL-18RaECD is by not more than a factor of 10 weaker
1435 than the affinity (KD value) of the binding to recombinant human IL-18Ra ECD of a VHH
1436 antibody domain consisting of the sequence from the Table of VHH Sequences that has the
1437 highest degree of sequence identity with the sequence of said VHH antibody domain of (D).
1438 The degree of sequence identity can be determined by sequence alignment.
1439
1440 Embodiment 123: The VHH antibody domain or fragment thereof according to any one of
1441 embodiments 24 to 121, wherein in (D) the affinity (KD value) of the binding of the VHH
1442 antibody domain to recombinant human IL-18Ra ECD is by not more than a factor of 5 weaker
1443 than the affinity (KD value) of the binding to recombinant human IL-18Ra ECD of a VHH
1444 antibody domain consisting of the sequence from the Table of VHH Sequences that has the 1445 highest degree of sequence identity with the sequence of said VHH antibody domain of (D).
1446 The degree of sequence identity can be determined by sequence alignment.
1447
1448 Embodiment 124: The VHH antibody domain or fragment thereof according to any one of
1449 embodiments 24 to 121, wherein in (D) the affinity (KD value) of the binding of the VHH
1450 antibody domain to recombinant human IL-18Ra ECD is by not more than a factor of 2 weaker
1451 than the affinity (KD value) of the binding to recombinant human IL-18Ra ECD of a VHH
1452 antibody domain consisting of the sequence from the Table of VHH Sequences that has the
1453 highest degree of sequence identity with the sequence of said VHH antibody domain of (D).
1454
1455 Embodiment 125: The VHH antibody domain or fragment thereof according to any one of
1456 embodiments 24 to 121, wherein in (D) the affinity (KD value) of the binding of the VHH
1457 antibody domain to recombinant human IL-18Ra ECD is by not more than a factor of 1.5
1458 weaker than the affinity (KD value) of the binding to recombinant human IL-18Ra ECD of a
1459 VHH antibody domain consisting of the sequence from the Table of VHH Sequences that has
1460 the highest degree of sequence identity with the sequence of said VHH antibody domain of (D).
1461
1462 Embodiment 126: The VHH antibody domain or fragment thereof according to any one of
1463 embodiments 24 to 125, wherein in (D) the affinity (KD value) of the binding of the VHH
1464 antibody domain to recombinant human IL-18Ra ECD is by not more than a factor of 10
1465 stronger than the affinity (KD value) of the binding to recombinant human IL-18Ra ECD of a
1466 VHH antibody domain consisting of the sequence from the Table of VHH Sequences that has
1467 the highest degree of sequence identity with the sequence of said VHH antibody domain of (D).
1468
1469 Embodiment 127: The VHH antibody domain or fragment thereof according to any one of
1470 embodiments 24 to 125, wherein in (D) the affinity (KD value) of the binding of the VHH
1471 antibody domain to recombinant human IL-18Ra ECD is by not more than a factor of 5 stronger
1472 than the affinity (KD value) of the binding to recombinant human IL-18Ra ECD of a VHH
1473 antibody domain consisting of the sequence from the Table of VHH Sequences that has the
1474 highest degree of sequence identity with the sequence of said VHH antibody domain of (D).
1475
1476 Embodiment 128: The VHH antibody domain or fragment thereof according to any one of
1477 embodiments 24 to 125, wherein in (D) the affinity (KD value) of the binding of the VHH
1478 antibody domain to recombinant human IL-18Ra ECD is by not more than a factor of 2 stronger 1479 than the affinity (KD value) of the binding to recombinant human IL-18Ra ECD of a VHH
1480 antibody domain consisting of the sequence from the Table of VHH Sequences that has the
1481 highest degree of sequence identity with the sequence of said VHH antibody domain of (D).
1482
1483 Embodiment 129: The VHH antibody domain or fragment thereof according to any one of
1484 embodiments 24 to 125, wherein in (D) the affinity (KD value) of the binding of the VHH
1485 antibody domain to recombinant human IL-18Ra ECD is by not more than a factor of 1.5
1486 stronger than the affinity (KD value) of the binding to recombinant human IL-18Ra ECD of a
1487 VHH antibody domain consisting of the sequence from the Table of VHH Sequences that has
1488 the highest degree of sequence identity with the sequence of said VHH antibody domain of (D).
1489
1490 Embodiment 130: The VHH antibody domain or fragment thereof according to any one of
1491 embodiments 91 to 129, wherein said KD value is determined in in vitro binding experiments
1492 through biolayer interferometry.
1493
1494 Embodiment 131 : The VHH antibody domain or fragment thereof according to any one of
1495 embodiments 91 to 130, wherein said KD value is measured by kinetic measurements by
1496 biolayer interferometry at 25°C and 1000 rpm in KB Buffer (PBS + 0.1 % Tween-20 +
1497 1% BSA).
1498
1499 Embodiment 132: The VHH antibody domain or fragment thereof according to any one of
1500 embodiments 24 to 131, wherein said VHH antibody domain of (A) comprises one VHH
1501 sequence selected from the group consisting of VHH1, VHH2, VHH3, VHH4, VHH5, VHH6,
1502 VHH8, VHH9 and VHH10 shown in the Table of VHH Sequences.
1503
1504 Embodiment 133: The VHH antibody domain or fragment thereof according to any one of
1505 embodiments 24 to 131, wherein said VHH antibody domain of (A) comprises one VHH
1506 sequence selected from the group consisting of VHH1, VHH2, VHH5, VHH6, VHH8, VHH9
1507 and VHH10 shown in the Table of VHH Sequences.
1508
1509 Embodiment 134: The VHH antibody domain or fragment thereof according to any one of
1510 embodiments 24 to 131, wherein said VHH antibody domain of (A) comprises one VHH
1511 sequence selected from the group consisting of VHH2, VHH6, VHH8 and VHH10 shown in
1512 the Table of VHH Sequences. 1513
1514 Embodiment 135: The VHH antibody domain or fragment thereof according to any one of
1515 embodiments 24 to 131, wherein said VHH antibody domain of (A) comprises one VHH
1516 sequence selected from the group consisting of VHH6 and VHHl 1 shown in the Table of VHH
1517 Sequences.
1518
1519 Embodiment 136: The VHH antibody domain or fragment thereof according to any one of
1520 embodiments 24 to 131, wherein said VHH antibody domain of (A) comprises one VHH
1521 sequence selected from the group consisting of VHHl, VHH2, VHH5, VHH6, VHH8 and
1522 VHH10 shown in the Table of VHH Sequences.
1523
1524 Embodiment 137: The VHH antibody domain or fragment thereof according to any one of
1525 embodiments 24 to 131, wherein said VHH antibody domain of (A) comprises one VHH
1526 sequence selected from the group consisting of VHH2, VHH6, VHH8 and VHH10 shown in
1527 the Table of VHH Sequences.
1528
1529 Embodiment 138: The VHH antibody domain or fragment thereof according to any one of
1530 embodiments 24 to 131, wherein said VHH antibody domain of (A) comprises one VHH
1531 sequence selected from the group consisting of VHH2 and VHH8 shown in the Table of VHH
1532 Sequences.
1533
1534 Embodiment 139: The VHH antibody domain or fragment thereof according to any one of
1535 embodiments 24 to 131, wherein said VHH antibody domain of (A) comprises the VHH
1536 sequence VHHl shown in the Table of VHH Sequences.
1537
1538 Embodiment 140: The VHH antibody domain or fragment thereof according to any one of
1539 embodiments 24 to 131, wherein said VHH antibody domain of (A) comprises the VHH
1540 sequence VHH2 shown in the Table of VHH Sequences.
1541
1542 Embodiment 141 : The VHH antibody domain or fragment thereof according to any one of
1543 embodiments 24 to 131, wherein said VHH antibody domain of (A) comprises the VHH
1544 sequence VHH3 shown in the Table of VHH Sequences.
1545 1546 Embodiment 142: The VHH antibody domain or fragment thereof according to any one of
1547 embodiments 24 to 131, wherein said VHH antibody domain of (A) comprises the VHH
1548 sequence VHH4 shown in the Table of VHH Sequences.
1549
1550 Embodiment 143: The VHH antibody domain or fragment thereof according to any one of
1551 embodiments 24 to 131, wherein said VHH antibody domain of (A) comprises the VHH
1552 sequence VHH5 shown in the Table of VHH Sequences.
1553
1554 Embodiment 144: The VHH antibody domain or fragment thereof according to any one of
1555 embodiments 24 to 131, wherein said VHH antibody domain of (A) comprises the VHH
1556 sequence VHH6 shown in the Table of VHH Sequences.
1557
1558 Embodiment 145: The VHH antibody domain or fragment thereof according to any one of
1559 embodiments 24 to 131, wherein said VHH antibody domain of (A) comprises the VHH
1560 sequence VHH8 shown in the Table of VHH Sequences.
1561
1562 Embodiment 146: The VHH antibody domain or fragment thereof according to any one of
1563 embodiments 24 to 131, wherein said VHH antibody domain of (A) comprises the VHH
1564 sequence VHH9 shown in the Table of VHH Sequences.
1565
1566 Embodiment 147: The VHH antibody domain or fragment thereof according to any one of
1567 embodiments 24 to 131, wherein said VHH antibody domain of (A) comprises the VHH
1568 sequence VHH10 shown in the Table of VHH Sequences.
1569
1570 Embodiment 148: The VHH antibody domain or fragment thereof according to any one of
1571 embodiments 24 to 131, wherein said VHH antibody domain of (A) comprises the VHH
1572 sequence VHH11 shown in the Table of VHH Sequences.
1573
1574 Embodiment 149: The VHH antibody domain or fragment thereof according to any one of
1575 embodiments 1 to 23 or 62 to 148, wherein in (a) said VHH antibody domain or fragment
1576 thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of one
1577 VHH selected from the group consisting of VHH1, VHH2, VHH3, VHH4, VHH5, VHH6,
1578 VHH8, VHH9 and VHH10 as shown in the Table of CDRs.
1579 1580 Embodiment 150: The VHH antibody domain or fragment thereof according to any one of
1581 embodiments 1 to 23 or 62 to 148, wherein in (a) said VHH antibody domain or fragment
1582 thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of one
1583 VHH selected from the group consisting of VHH1, VHH2, VHH5, VHH6, VHH8, VHH9 and
1584 VHH10 as shown in the Table of CDRs.
1585
1586 Embodiment 151 : The VHH antibody domain or fragment thereof according to any one of
1587 embodiments 1 to 23 or 62 to 148, wherein in (a) said VHH antibody domain or fragment
1588 thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of
1589 VHH2, VHH6, VHH8 and VHH10 as shown in the Table of CDRs.
1590
1591 Embodiment 152: The VHH antibody domain or fragment thereof according to any one of
1592 embodiments 1 to 23 or 62 to 148, wherein in (a) said VHH antibody domain or fragment
1593 thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of one
1594 VHH selected from the group consisting of VHH6 and VHH11.
1595
1596 Embodiment 153: The VHH antibody domain or fragment thereof according to any one of
1597 embodiments 1 to 23 or 62 to 148, wherein in (a) said VHH antibody domain or fragment
1598 thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of one
1599 VHH selected from the group consisting of VHH1, VHH2, VHH5, VHH6, VHH8 and VHH10
1600 as shown in the Table of CDRs.
1601
1602 Embodiment 154: The VHH antibody domain or fragment thereof according to any one of
1603 embodiments 1 to 23 or 62 to 148, wherein in (a) said VHH antibody domain or fragment
1604 thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of one
1605 VHH selected from the group consisting of VHH2, VHH6, VHH8, VHH10 as shown in the
1606 Table of CDRs.
1607
1608 Embodiment 155: The VHH antibody domain or fragment thereof according to any one of
1609 embodiments 1 to 23 or 62 to 148, wherein in (a) said VHH antibody domain or fragment
1610 thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of one
1611 VHH selected from the group consisting of VHH2 or VHH8 as shown in the Table of CDRs.
1612 1613 Embodiment 156: The VHH antibody domain or fragment thereof according to any one of
1614 embodiments 1 to 23 or 62 to 148, wherein in (a) said VHH antibody domain or fragment
1615 thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of VHH1
1616 as shown in the Table of CDRs.
1617
1618 Embodiment 157: The VHH antibody domain or fragment thereof according to any one of
1619 embodiments 1 to 23 or 62 to 148, wherein in (a) said VHH antibody domain or fragment
1620 thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of VHH2
1621 as shown in the Table of CDRs.
1622
1623 Embodiment 158: The VHH antibody domain or fragment thereof according to any one of
1624 embodiments 1 to 23 or 62 to 148, wherein in (a) said VHH antibody domain or fragment
1625 thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of VHH3
1626 as shown in the Table of CDRs.
1627
1628 Embodiment 159: The VHH antibody domain or fragment thereof according to any one of
1629 embodiments 1 to 23 or 62 to 148, wherein in (a) said VHH antibody domain or fragment
1630 thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of VHH4
1631 as shown in the Table of CDRs.
1632
1633 Embodiment 160: The VHH antibody domain or fragment thereof according to any one of
1634 embodiments 1 to 23 or 62 to 148, wherein in (a) said VHH antibody domain or fragment
1635 thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of VHH5
1636 as shown in the Table of CDRs.
1637
1638 Embodiment 161 : The VHH antibody domain or fragment thereof according to any one of
1639 embodiments 1 to 23 or 62 to 148, wherein in (a) said VHH antibody domain or fragment
1640 thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of VHH6
1641 as shown in the Table of CDRs.
1642
1643 Embodiment 162: The VHH antibody domain or fragment thereof according to any one of
1644 embodiments 1 to 23 or 62 to 148, wherein in (a) said VHH antibody domain or fragment
1645 thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of VHH8
1646 as shown in the Table of CDRs. 1647
1648 Embodiment 163: The VHH antibody domain or fragment thereof according to any one of
1649 embodiments 1 to 23 or 62 to 148, wherein in (a) said VHH antibody domain or fragment
1650 thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of VHH9
1651 as shown in the Table of CDRs.
1652
1653 Embodiment 164: The VHH antibody domain or fragment thereof according to any one of
1654 embodiments 1 to 23 or 62 to 148, wherein in (a) said VHH antibody domain or fragment
1655 thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of
1656 VHH10 as shown in the Table of CDRs.
1657
1658 Embodiment 165: The VHH antibody domain or fragment thereof according to any one of
1659 embodiments 1 to 23 or 62 to 148, wherein in (a) said VHH antibody domain or fragment
1660 thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of
1661 VHH11 as shown in the Table of CDRs.
1662
1663 Embodiment 166: The VHH antibody domain or fragment thereof according to any one of
1664 embodiments 1 to 165, wherein said VHH antibody domain or fragment thereof competes with
1665 VHH2 for binding to recombinant human IL-18Ra ECD.
1666
1667 Embodiment 167: The VHH antibody domain or fragment thereof according to any one of
1668 embodiments 1 to 165, wherein said VHH antibody domain or fragment thereof partially
1669 competes with VHH2 for binding to recombinant human IL-18Ra ECD.
1670
1671 Embodiment 168: The VHH antibody domain or fragment thereof according to any one of
1672 embodiments 1 to 167, wherein said VHH antibody domain or fragment thereof does not
1673 compete with VHH15 for binding to recombinant human IL-18RP ECD.
1674
1675 Embodiment 169: The VHH antibody domain or fragment thereof according to any one of
1676 embodiments 1 to 168, wherein said humanization is by germlining.
1677
1678 Embodiment 170: The VHH antibody domain or fragment thereof according to embodiment
1679 169, wherein said germlining involves 1680 - identifying the human VH germline sequence that is closest to the sequence to be
1681 humanized with respect to its sequence similarity; and
1682 - replacing amino acid(s) in the sequence to be humanized by the amino acid(s) at the
1683 corresponding sequence position(s) in the closest human VH germline sequence.
1684
1685 Sequence similarity and corresponding sequence positions can be determined by sequence
1686 alignment as described above.
1687
1688 Embodiment 171 : The VHH antibody domain or fragment thereof according to embodiment
1689 169, wherein said germlining consists of
1690 - identifying the human VH germline sequence that is closest to the sequence to be
1691 humanized with respect to its sequence similarity; and
1692 - replacing amino acid(s) in the sequence to be humanized by the amino acid(s) at the
1693 corresponding sequence position(s) in the closest human VH germline sequence.
1694
1695 Embodiment 172: The VHH antibody domain or fragment thereof according to any one of
1696 embodiments 1 to 171, wherein said VHH antibody domain (resp. fragment thereof) with
1697 humanization binds to human IL-18Ra ECD with an affinity (KD value) that is not weaker by
1698 a factor of more than 10 compared to the binding of a corresponding VHH antibody domain
1699 (resp. fragment thereof) without humanization to human IL-18Ra ECD.
1700
1701 As a skilled person understands, the term "corresponding VHH antibody domain without
1702 humanization" refers to a VHH antibody domain that differs only by the amino acid changes
1703 introduced in order to carry out said humanization, but that is otherwise identical.
1704
1705 Embodiment 173: The VHH antibody domain or fragment thereof according to any one of
1706 embodiments 1 to 171, wherein said VHH antibody domain (resp. fragment thereof) with
1707 humanization binds to human IL-18Ra ECD with an affinity (KD value) that is not weaker by
1708 a factor of more than 5 compared to the binding of a corresponding VHH antibody domain
1709 (resp. fragment thereof) without humanization to human IL-18Ra ECD.
1710
1711 Embodiment 174: The VHH antibody domain or fragment thereof according to any one of
1712 embodiments 1 to 171, wherein said VHH antibody domain (resp. fragment thereof) with
1713 humanization binds to human IL-18Ra ECD with an affinity (KD value) that is not weaker by 1714 a factor of more than 2 compared to the binding of a corresponding VHH antibody domain
1715 (resp. fragment thereof) without humanization to human IL-18Ra ECD.
1716
1717 Embodiment 175: The VHH antibody domain or fragment thereof according to any one of
1718 embodiments 1 to 171, wherein said VHH antibody domain (resp. fragment thereof) with
1719 humanization binds to human IL-18Ra ECD with an affinity (KD value) that is not weaker than
1720 the binding of a corresponding VHH antibody domain (resp. fragment thereof) without
1721 humanization to human IL-18Ra ECD.
1722
1723 Embodiment 176: The VHH antibody domain or fragment thereof according to any one of
1724 embodiments 172 to 175, wherein said affinity is determined by KD measurement.
1725
1726 Embodiment 177: The VHH antibody domain or fragment thereof according to any one of
1727 embodiments 24 to 176, wherein said VHH antibody domain comprises a VHH antibody
1728 domain according to (A), (B) or (C)/said fragment of a VHH antibody domain comprises a
1729 fragment of a VHH antibody domain according to (A), (B) or (C).
1730
1731 Embodiment 178: The VHH antibody domain or fragment thereof according to any one of
1732 embodiments 24 to 176, wherein said VHH antibody domain comprises a VHH antibody
1733 domain according to (A), (B) or (D)/said fragment of a VHH antibody domain comprises a
1734 fragment of a VHH antibody domain according to (A), (B) or (D).
1735
1736 Embodiment 179: The VHH antibody domain or fragment thereof according to any one of
1737 embodiments 24 to 176, wherein said VHH antibody domain comprises a VHH antibody
1738 domain according to (A), (C) or (D)/said fragment of a VHH antibody domain comprises a
1739 fragment of a VHH antibody domain according to (A), (C) or (D).
1740
1741 Embodiment 180: The VHH antibody domain or fragment thereof according to any one of
1742 embodiments 24 to 176, wherein said VHH antibody domain comprises a VHH antibody
1743 domain according to (A) or (B)/said fragment of a VHH antibody domain comprises a fragment
1744 of a VHH antibody domain according to (A) or (B).
1745
1746 Embodiment 181 : The VHH antibody domain or fragment thereof according to any one of
1747 embodiments 24 to 176, wherein said VHH antibody domain comprises a VHH antibody 1748 domain according to (A) or (C)/said fragment of a VHH antibody domain comprises a fragment
1749 of a VHH antibody domain according to (A) or (C).
1750
1751 Embodiment 182: The VHH antibody domain or fragment thereof according to any one of
1752 embodiments 24 to 176, wherein said VHH antibody domain comprises a VHH antibody
1753 domain according to (A) or (D)/said fragment of a VHH antibody domain comprises a fragment
1754 of a VHH antibody domain according to (A) or (D).
1755
1756 Embodiment 183: The VHH antibody domain or fragment thereof according to any one of
1757 embodiments 24 to 176, wherein said VHH antibody domain comprises a VHH antibody
1758 domain according to (A)/said fragment of a VHH antibody domain comprises a fragment of a
1759 VHH antibody domain according to (A).
1760
1761 Embodiment 184: The VHH antibody domain or fragment thereof according to any one of
1762 embodiments 24 to 176, wherein said VHH antibody domain comprises a VHH antibody
1763 domain according to (B)/said fragment of a VHH antibody domain comprises a fragment of a
1764 VHH antibody domain according to (B).
1765
1766 Embodiment 185: The VHH antibody domain or fragment thereof according to any one of
1767 embodiments 1 to 23 or 62 to 184, wherein said VHH antibody domain or fragment thereof
1768 comprises complementarity determining regions according to (a) or (b).
1769
1770 Embodiment 186: The VHH antibody domain or fragment thereof according to any one of
1771 embodiments 1 to 23 or 62 to 184, wherein said VHH antibody domain or fragment thereof
1772 comprises complementarity determining regions according to (a) or (c).
1773
1774 Embodiment 187: The VHH antibody domain or fragment thereof according to any one of
1775 embodiments 1 to 23 or 62 to 184, wherein said VHH antibody domain or fragment thereof
1776 comprises complementarity determining regions according to (a).
1777
1778 Embodiment 188: The VHH antibody domain or fragment thereof according to any one of
1779 embodiments 1 to 23 or 62 to 184, wherein said VHH antibody domain or fragment thereof
1780 comprises complementarity determining regions according to (b).
1781 1782 Fourth aspect of the present disclosure (also referred to as "Embodiment 189"): According to a
1783 fourth aspect, the present disclosure relates to a VHH antibody domain or a fragment thereof,
1784 wherein
1785 (d) said VHH antibody domain or fragment thereof comprises the complementarity
1786 determining regions CDR1, CDR2 and CDR3 of one VHH selected from the group
1787 consisting of VHH12, VHH13, VHH14, VHH15, VHH16, VHH17, VHH18,
1788 VHH20, VHH21 and VHH22 as shown in the Table of CDRs;
1789 (e) said VHH antibody domain or fragment thereof comprises the complementarity
1790 determining regions CDR1, CDR2 and CDR3 as defined in (d) with modification,
1791 wherein the modification is that the sequence of at least one of CDR1, CDR2 and
1792 CDR3 is humanized; or
1793 (f) said VHH antibody domain or fragment thereof comprises the complementarity
1794 determining regions CDR1, CDR2 and CDR3 as defined in (d) with modification,
1795 wherein the modification is
1796 - the replacement, addition or deletion of up to three amino acids in CDR1,
1797 - the replacement, addition or deletion of up to three amino acids in CDR2
1798 and/or
1799 - the replacement, addition or deletion of up to three amino acids in CDR3;
1800
1801 Table of CDRs:
Figure imgf000072_0001
Figure imgf000073_0001
Figure imgf000074_0001
1802
1803
1804 To the fourth aspect of the present disclosure and the embodiments referring thereto, the same
1805 explanations and definitions apply accordingly as for the first to third aspects of the present
1806 disclosure and the embodiments referring thereto.
1807
1808 Embodiment 190: The VHH antibody domain or fragment thereof according to embodiment
1809 189, wherein the modification in (e) is that the sequence of CDR1 and/or CDR2, but not the
1810 sequence of CDR3 is humanized.
1811 1812 Embodiment 191 : The VHH antibody domain or fragment thereof according to any one of
1813 embodiments 189 or 190, wherein the modification in (e) is that the sequence of CDR1 is
1814 humanized, but not the sequence of CDR2 and CDR3.
1815
1816 Embodiment 192: The VHH antibody domain or fragment thereof according to any one of
1817 embodiments 189 or 190, wherein the modification in (e) is that the sequence of CDR2 is
1818 humanized, but not the sequence of CDR1 and CDR3.
1819
1820 Embodiment 193: The VHH antibody domain or fragment thereof according to any one of
1821 embodiments 189 to 192, wherein the modification in (e) is that the sequence of one, but not
1822 more than one of CDR1, CDR2 and CDR3 is humanized.
1823
1824 Embodiment 194: The VHH antibody domain or fragment thereof according to any one of
1825 embodiments 189 to 193, wherein said humanization of said CDR(s) is by replacing at least one
1826 amino acid in the sequence of said CDR by the corresponding amino acid of a human VH
1827 domain.
1828
1829 Embodiment 195: The VHH antibody domain or fragment thereof according to any one of
1830 embodiments 189 to 194, wherein said humanization of said CDR(s) is by replacing up to three
1831 amino acids in the sequence of said CDR by the corresponding amino acid of a human VH
1832 domain.
1833
1834 Embodiment 196: The VHH antibody domain or fragment thereof according to any one of
1835 embodiments 189 to 194, wherein said humanization of said CDR(s) is by replacing up to three
1836 amino acids in the sequence of CDR1 and/or CDR2 and up to one amino acid in the sequence
1837 of CDR3 by the corresponding amino acid of a human VH domain.
1838
1839 Embodiment 197: The VHH antibody domain or fragment thereof according to any one of
1840 embodiments 189 to 194, wherein said humanization of said CDR(s) is by replacing up to two
1841 amino acids in the sequence of said CDR by the corresponding amino acid of a human VH
1842 domain.
1843
1844 Embodiment 198: The VHH antibody domain or fragment thereof according to any one of
1845 embodiments 189 to 194, wherein said humanization of said CDR(s) is by replacing up to two 1846 amino acids in the sequence of CDR1 and/or CDR2 and up to one amino acid in the sequence
1847 of CDR3 by the corresponding amino acid of a human VH domain.
1848
1849 Embodiment 199: The VHH antibody domain or fragment thereof according to any one of
1850 embodiments 189 to 198, wherein said humanization of said CDR(s) is by replacing one amino
1851 acid in the sequence of said CDR by the corresponding amino acid of a human VH domain.
1852
1853 Embodiment 200: The VHH antibody domain or fragment thereof according to any one of
1854 embodiments 189 to 199, wherein the modification in (f) is
1855 - the replacement, addition or deletion of up to three amino acids in CDR1,
1856 - the replacement, addition or deletion of up to three amino acids in CDR2 and/or
1857 - the replacement, addition or deletion of up to one amino acid in CDR3.
1858
1859 Embodiment 201 : The VHH antibody domain or fragment thereof according to any one of
1860 embodiments 189 to 199, wherein the modification in (f) is
1861 - the replacement, addition or deletion of up to two amino acids in CDR1,
1862 - the replacement, addition or deletion of up to two amino acids in CDR2 and/or
1863 - the replacement, addition or deletion of up to two amino acids in CDR3;
1864
1865 Embodiment 202: The VHH antibody domain or fragment thereof according to any one of
1866 embodiments 189 to 199, wherein the modification in (f) is
1867 - the replacement, addition or deletion of up to two amino acids in CDR1;
1868 - the replacement, addition or deletion of up to two amino acids in CDR2; and/or
1869 - the replacement, addition or deletion of up to one amino acid in CDR3.
1870
1871 Embodiment 203: The VHH antibody domain or fragment thereof according to any one of
1872 embodiments 189 to 199, wherein the modification in (f) is
1873 - the replacement, addition or deletion of up to two amino acids in CDR1 and/or
1874 - the replacement, addition or deletion of up to two amino acids in CDR2;
1875 wherein the sequence of CDR3 is unmodified.
1876
1877 As a skilled person understands, the indication that the "sequence of CDR3 is unmodified"
1878 means that the sequence is unmodified compared to the sequence provided for CDR3 for the
1879 VHH at issue in the Table of CDRs. 1880
1881 Embodiment 204: The VHH antibody domain or fragment thereof according to any one of
1882 embodiments 189 to 199, wherein the modification in (f) is
1883 - the replacement, addition or deletion of up to two amino acids in CDR1,
1884 wherein the sequence of CDR2 and CDR3 is unmodified.
1885
1886 Embodiment 205: The VHH antibody domain or fragment thereof according to any one of
1887 embodiments 189 to 199, wherein the modification in (f) is
1888 - the replacement, addition or deletion of up to two amino acids in CDR2,
1889 wherein the sequence of CDR1 and CDR3 is unmodified.
1890
1891 Embodiment 206: The VHH antibody domain or fragment thereof according to any one of
1892 embodiments 189 to 199, wherein the modification in (f) is
1893 - the replacement, addition or deletion of up to one amino acid in CDR1;
1894 - the replacement, addition or deletion of up to one amino acid in CDR2; and/or
1895 - the replacement, addition or deletion of up to one amino acid in CDR3.
1896
1897 Embodiment 207: The VHH antibody domain or fragment thereof according to any one of
1898 embodiments 189 to 199, wherein the modification in (f) is
1899 - the replacement, addition or deletion of one amino acid in CDR1 and/or
1900 - the replacement, addition or deletion of one amino acid in CDR2;
1901 wherein the sequence of CDR3 is unmodified.
1902
1903 Embodiment 208: The VHH antibody domain or fragment thereof according to any one of
1904 embodiments 189 to 199, wherein the modification in (f) is
1905 - the replacement, addition or deletion of one amino acid in CDR1,
1906 wherein the sequence of CDR2 and CDR3 is unmodified.
1907
1908 Embodiment 209: The VHH antibody domain or fragment thereof according to any one of
1909 embodiments 189 to 199, wherein the modification in (f) is
1910 - the replacement, addition or deletion of one amino acid in CDR2,
1911 wherein the sequence of CDR1 and CDR3 is unmodified.
1912 1913 Embodiment 210: The VHH antibody domain or fragment thereof according to any one of
1914 embodiments 189 to 209, wherein the modification in (f) comprises only the replacement, but
1915 not the addition or deletion of amino acids.
1916
1917 Embodiment 211 : The VHH antibody domain or fragment thereof according to any one of
1918 embodiments 189 to 210, wherein said replacement is a conservative amino acid replacement.
1919
1920 Fifth aspect of the present disclosure (also referred to as "Embodiment 212"): According to a
1921 fifth aspect, the present disclosure relates to a VHH antibody domain or a fragment thereof,
1922 wherein
1923 (E) said VHH antibody domain comprises the amino acid sequence of a VHH selected
1924 from the group consisting of VHH12, VHH13, VHH14, VHH15, VHH16, VHH17,
1925 VHH18, VHH20, VHH21 and VHH22 as shown in the Table of VHH Sequences;
1926 (F) said VHH antibody domain comprises a VHH sequence as defined in (E) with
1927 modification, wherein the modification is that said sequence is humanized;
1928 (G) said VHH antibody domain comprises a VHH sequence as defined in (E) with
1929 modification, wherein the modification is the replacement, addition or deletion of up
1930 to 25 amino acids; or
1931 (H) said VHH antibody domain comprises a VHH sequence that is at least 75% identical
1932 to a VHH sequence referred to in (E);
1933
1934 Table of VHH Sequences:
Figure imgf000078_0001
Figure imgf000079_0001
Figure imgf000080_0001
1935
1936
1937 Sixth aspect of the present disclosure (also referred to as "Embodiment 213"): According to a
1938 sixth aspect, the present disclosure relates to a VHH antibody domain or a fragment thereof,
1939 wherein
1940 (E) said VHH antibody domain consists of the amino acid sequence of a VHH selected
1941 from the group consisting of VHH12, VHH13, VHH14, VHH15, VHH16, VHH17,
1942 VHH18, VHH20, VHH21 and VHH22 as shown in the Table of VHH Sequences;
1943 (F) said VHH antibody domain consists of a VHH sequence as defined in (E) with
1944 modification, wherein the modification is that said sequence is humanized;
1945 (G) said VHH antibody domain consists of a VHH sequence as defined in (E) with
1946 modification, wherein the modification is the replacement, addition or deletion of up
1947 to 25 amino acids; or 1948 (H) said VHH antibody domain consists of a VHH sequence that is at least 75% identical
1949 to a VHH sequence referred to in (E).
1950
1951 To the fifth and sixth aspects of the present disclosure and the embodiments referring thereto,
1952 the same explanations and definitions apply accordingly as for the first to fourth aspects of the
1953 present disclosure and the embodiments referring thereto.
1954
1955 Embodiment 214: The VHH antibody domain or fragment thereof according to any one of
1956 embodiments 212 or 213, wherein said fragment of said VHH antibody domain comprises at
1957 least 75% of the amino acids of the sequence of said VHH antibody domain. As the skilled
1958 person understands, this means that that fragment lacks up to a quarter of the total number of
1959 amino acids of said VHH antibody domain, wherein, compared to the "complete" VHH
1960 antibody domain sequence said amino acids are lacking either at the N-terminus or at the C-
1961 terminus.
1962
1963 Embodiment 215: The VHH antibody domain or fragment thereof according to any one of
1964 embodiments 212 or 213, wherein said fragment of said VHH antibody domain comprises at
1965 least 80% of the amino acids of the sequence of said VHH antibody domain.
1966
1967 Embodiment 216: The VHH antibody domain or fragment thereof according to any one of
1968 embodiments 212 or 213, wherein said fragment of said VHH antibody domain comprises at
1969 least 85% of the amino acids of the sequence of said VHH antibody domain.
1970
1971 Embodiment 217: The VHH antibody domain or fragment thereof according to any one of
1972 embodiments 212 or 213, wherein said fragment of said VHH antibody domain comprises at
1973 least 90% of the amino acids of the sequence of said VHH antibody domain.
1974
1975 Embodiment 218: The VHH antibody domain or fragment thereof according to any one of
1976 embodiments 212 or 213, wherein said fragment of said VHH antibody domain comprises at
1977 least 95% of the amino acids of the sequence of said VHH antibody domain.
1978
1979 Embodiment 219: The VHH antibody domain or fragment thereof according to any one of
1980 embodiments 212 or 213, wherein said fragment of said VHH antibody domain comprises at
1981 least 98% of the amino acids of the sequence of said VHH antibody domain. 1982
1983 Embodiment 220: The VHH antibody domain or fragment thereof according to any one of
1984 embodiments 212 or 213, wherein said fragment of said VHH antibody domain comprises at
1985 least 99% of the amino acids of the sequence of said VHH antibody domain.
1986
1987 Embodiment 221 : The VHH antibody domain or fragment thereof according to any one of
1988 embodiments 212 to 220, wherein said fragment of said VHH antibody domain comprises the
1989 complementarity determining regions CDR1, CDR2 and CDR3.
1990
1991 Embodiment 222: The VHH antibody domain or fragment thereof according to any one of
1992 embodiments 212 to 221, wherein said fragment of said VHH antibody domain comprises at
1993 least the sequence from the N-terminus of CDR1 to the C-terminus of CDR3 of said VHH
1994 antibody domain.
1995
1996 Embodiment 223: The VHH antibody domain or fragment thereof according to any one of
1997 embodiments 212 to 222, wherein in (E) said fragment of said VHH antibody domain comprises
1998 all the complementarity determining regions (CDRs) of said VHH antibody domain.
1999
2000 Embodiment 224: The VHH antibody domain or fragment thereof according to any one of
2001 embodiments 212 to 223, wherein in (F) said humanization of said sequence is by replacing at
2002 least one amino acid of said sequence by the corresponding amino acid of a human VH (variable
2003 heavy) domain.
2004
2005 Embodiment 225: The VHH antibody domain or fragment thereof according to any one of
2006 embodiments 212 to 224, wherein in (F) said humanization of said sequence is by (individually)
2007 replacing up to 25 amino acids of said sequence by the corresponding amino acids of a human
2008 VH domain.
2009
2010 Embodiment 226: The VHH antibody domain or fragment thereof according to any one of
2011 embodiments 212 to 224, wherein in (F) said humanization of said sequence is by replacing up
2012 to 20 amino acids of said sequence by the corresponding amino acids of a human VH domain.
2013 2014 Embodiment 227: The VHH antibody domain or fragment thereof according to any one of
2015 embodiments 212 to 224, wherein in (F) said humanization of said sequence is by replacing up
2016 to 15 amino acids of said sequence by the corresponding amino acids of a human VH domain.
2017
2018 Embodiment 228: The VHH antibody domain or fragment thereof according to any one of
2019 embodiments 212 to 224, wherein in (F) said humanization of said sequence is by replacing up
2020 to 10 amino acids of said sequence by the corresponding amino acids of a human VH domain.
2021
2022 Embodiment 229: The VHH antibody domain or fragment thereof according to any one of
2023 embodiments 212 to 224, wherein in (F) said humanization of said sequence is by replacing up
2024 to 5 amino acids of said sequence by the corresponding amino acids of a human VH domain.
2025
2026 Embodiment 230: The VHH antibody domain or fragment thereof according to any one of
2027 embodiments 212 to 224, wherein in (F) said humanization of said sequence is by replacing up
2028 to 3 amino acids of said sequence by the corresponding amino acids of a human VH domain.
2029
2030 Embodiment 231 : The VHH antibody domain or fragment thereof according to any one of
2031 embodiments 212 to 224, wherein in (F) said humanization of said sequence is by replacing up
2032 to 2 amino acids of said sequence by the corresponding amino acids of a human VH domain.
2033
2034 Embodiment 232: The VHH antibody domain or fragment thereof according to any one of
2035 embodiments 212 to 224, wherein in (F) said humanization of said sequence is by replacing one
2036 amino acid of said sequence by the corresponding amino acid of a human VH domain.
2037
2038 Embodiment 233: The VHH antibody domain or fragment thereof according to any one of
2039 embodiments 212 to 232, wherein in (F) said humanization is within the framework regions of
2040 said VHH antibody domain and/or within the CDRs of said VHH antibody domain.
2041
2042 Embodiment 234: The VHH antibody domain or fragment thereof according to any one of
2043 embodiments 212 to 232, wherein in (F) said humanization is within the framework regions of
2044 said VHH antibody domain, but not within the CDRs of said VHH antibody domain.
2045 2046 Embodiment 235: The VHH antibody domain or fragment thereof according to any one of
2047 embodiments 212 to 224, wherein in (F) said humanization is within the CDRs of said VHH
2048 antibody domain, but not within the framework regions of said VHH antibody domain.
2049
2050 Embodiment 236: The VHH antibody domain or fragment thereof according to any one of
2051 embodiments 212 to 233 or 235, wherein in (F) said humanization within the CDRs of said
2052 VHH antibody domain is within CDR1, CDR2 and/or CDR3.
2053
2054 Embodiment 237: The VHH antibody domain or fragment thereof according to any one of
2055 embodiments 212 to 233 or 235 to 236, wherein in (F) said humanization within the CDRs of
2056 said VHH antibody domain is within CDR1 and/or CDR2.
2057
2058 Embodiment 238: The VHH antibody domain or fragment thereof according to any one of
2059 embodiments 212 to 233 or 235 to 237, wherein in (F) said humanization within the CDRs of
2060 said VHH antibody domain is within CDR1.
2061
2062 Embodiment 239: The VHH antibody domain or fragment thereof according to any one of
2063 embodiments 212 to 233 or 235 to 238, wherein in (F) said humanization within the CDRs of
2064 said VHH antibody domain is within CDR2.
2065
2066 Embodiment 240: The VHH antibody domain or fragment thereof according to any one of
2067 embodiments 212 to 239, wherein in (F) said humanization within the CDRs of said VHH
2068 antibody domain is not within CDR3.
2069
2070 Embodiment 241: The VHH antibody domain or fragment thereof according to any one of
2071 embodiments 212 to 240, wherein in (G) the modification is the replacement, addition or
2072 deletion of up to 20 amino acids.
2073
2074 Embodiment 242: The VHH antibody domain or fragment thereof according to any one of
2075 embodiments 212 to 240, wherein in (G) the modification is the replacement, addition or
2076 deletion of up to 15 amino acids.
2077 2078 Embodiment 243: The VHH antibody domain or fragment thereof according to any one of
2079 embodiments 212 to 240, wherein in (G) the modification is the replacement, addition or
2080 deletion of up to 10 amino acids.
2081
2082 Embodiment 244: The VHH antibody domain or fragment thereof according to any one of
2083 embodiments 212 to 240, wherein in (G) the modification is the replacement, addition or
2084 deletion of up to 5 amino acids.
2085
2086 Embodiment 245: The VHH antibody domain or fragment thereof according to any one of
2087 embodiments 212 to 240, wherein in (G) the modification is the replacement, addition or
2088 deletion of up to 3 amino acids.
2089
2090 Embodiment 246: The VHH antibody domain or fragment thereof according to any one of
2091 embodiments 212 to 240, wherein in (G) the modification is the replacement, addition or
2092 deletion of up to 2 amino acids.
2093
2094 Embodiment 247: The VHH antibody domain or fragment thereof according to any one of
2095 embodiments 212 to 240, wherein in (G) the modification is the replacement, addition or
2096 deletion of one amino acid.
2097
2098 Embodiment 248: The VHH antibody domain or fragment thereof according to any one of
2099 embodiments 212 to 247, wherein the modification in (G) comprises only the replacement, but
2100 not the addition or deletion of amino acids.
2101
2102 Embodiment 249: The VHH antibody domain or fragment thereof according to any one of
2103 embodiments 212 to 248, wherein in (E) said VHH antibody domain or fragment thereof
2104 comprises the complementarity determining regions CDR1, CDR2 and CDR3 of one VHH
2105 selected from the group consisting of VHH12, VHH13, VHH14, VHH15, VHH16, VHH17,
2106 VHH18, VHH20, VHH21 and VHH22 as shown in the Table of CDRs.
2107
2108 Embodiment 250: The VHH antibody domain or fragment thereof according to any one of
2109 embodiments 212 to 249, wherein in (F) to (H)
2110 (d) said VHH antibody domain or fragment thereof comprises the complementarity
2111 determining regions CDR1, CDR2 and CDR3 of one VHH selected from the group 2112 consisting of VHH12, VHH13, VHH14, VHH15, VHH16, VHH17, VHH18,
2113 VHH20, VHH21 and VHH22 as shown in the Table of CDRs;
2114 (e) said VHH antibody domain or fragment thereof comprises the complementarity
2115 determining regions CDR1, CDR2 and CDR3 as defined in (d) with modification,
2116 wherein the modification is that the sequence of at least one of CDR1, CDR2 and
2117 CDR3 is humanized;
2118 (f) said VHH antibody domain or fragment thereof comprises the complementarity
2119 determining regions CDR1, CDR2 and CDR3 as defined in (d) with modification,
2120 wherein the modification is
2121 - the replacement, addition or deletion of up to three amino acids in CDR1,
2122 - the replacement, addition or deletion of up to three amino acids in CDR2
2123 and/or
2124 - the replacement, addition or deletion of up to three amino acids in CDR3.
2125
2126 Embodiment 251 : The VHH antibody domain or fragment thereof according to embodiment
2127 250, wherein the modification in (e) is that the sequence of CDR1 and/or CDR2, but not the
2128 sequence of CDR3 is humanized.
2129
2130 Embodiment 252: The VHH antibody domain or fragment thereof according to any one of
2131 embodiments 250 or 251, wherein the modification in (e) is that the sequence of CDR1 is
2132 humanized, but not the sequence of CDR2 and CDR3.
2133
2134 Embodiment 253: The VHH antibody domain or fragment thereof according to any one of
2135 embodiments 250 or 251, wherein the modification in (e) is that the sequence of CDR2 is
2136 humanized, but not the sequence of CDR1 and CDR3.
2137
2138 Embodiment 254: The VHH antibody domain or fragment thereof according to any one of
2139 embodiments 250 to 253, wherein the modification in (e) is that the sequence of one, but not
2140 more than one of CDR1, CDR2 and CDR3 is humanized.
2141
2142 Embodiment 255: The VHH antibody domain or fragment thereof according to any one of
2143 embodiments 250 to 254, wherein said humanization of said CDR(s) is by replacing at least one
2144 amino acid in the sequence of said CDR by the corresponding amino acid of a human VH
2145 domain. 2146
2147 Embodiment 256: The VHH antibody domain or fragment thereof according to any one of
2148 embodiments 250 to 255, wherein said humanization of said CDR(s) is by replacing up to three
2149 amino acids in the sequence of said CDR by the corresponding amino acid of a human VH
2150 domain.
2151
2152 Embodiment 257: The VHH antibody domain or fragment thereof according to any one of
2153 embodiments 250 to 255, wherein said humanization of said CDR(s) is by replacing up to three
2154 amino acids in the sequence of CDR1 and/or CDR2 and up to one amino acid in the sequence
2155 of CDR3 by the corresponding amino acid of a human VH domain.
2156
2157 Embodiment 258: The VHH antibody domain or fragment thereof according to any one of
2158 embodiments 250 to 255, wherein said humanization of said CDR(s) is by replacing up to two
2159 amino acids in the sequence of said CDR by the corresponding amino acid of a human VH
2160 domain.
2161
2162 Embodiment 259: The VHH antibody domain or fragment thereof according to any one of
2163 embodiments 250 to 255, wherein said humanization of said CDR(s) is by replacing up to two
2164 amino acids in the sequence of CDR1 and/or CDR2 and up to one amino acid in the sequence
2165 of CDR3 by the corresponding amino acid of a human VH domain.
2166
2167 Embodiment 260: The VHH antibody domain or fragment thereof according to any one of
2168 embodiments 250 to 259, wherein said humanization of said CDR(s) is by replacing one amino
2169 acid in the sequence of said CDR by the corresponding amino acid of a human VH domain.
2170
2171 Embodiment 261 : The VHH antibody domain or fragment thereof according to any one of
2172 embodiments 250 to 260, wherein the modification in (f) is
2173 - the replacement, addition or deletion of up to three amino acids in CDR1,
2174 - the replacement, addition or deletion of up to three amino acids in CDR2 and/or
2175 - the replacement, addition or deletion of up to two amino acids in CDR3.
2176
2177 Embodiment 262: The VHH antibody domain or fragment thereof according to any one of
2178 embodiments 250 to 260, wherein the modification in (f) is
2179 - the replacement, addition or deletion of up to three amino acids in CDR1, 2180 - the replacement, addition or deletion of up to three amino acids in CDR2 and/or
2181 - the replacement, addition or deletion of up to one amino acid in CDR3.
2182
2183 Embodiment 263: The VHH antibody domain or fragment thereof according to any one of
2184 embodiments 250 to 260, wherein the modification in (f) is
2185 - the replacement, addition or deletion of up to three amino acids in CDR1, and/or
2186 - the replacement, addition or deletion of up to three amino acids in CDR2,
2187 wherein the sequence of CDR3 is unmodified.
2188
2189 Embodiment 264: The VHH antibody domain or fragment thereof according to any one of
2190 embodiments 250 to 260, wherein the modification in (f) is
2191 - the replacement, addition or deletion of up to two amino acids in CDR1,
2192 - the replacement, addition or deletion of up to two amino acids in CDR2 and/or
2193 - the replacement, addition or deletion of up to two amino acids in CDR3;
2194
2195 Embodiment 265: The VHH antibody domain or fragment thereof according to any one of
2196 embodiments 250 to 260, wherein the modification in (f) is
2197 - the replacement, addition or deletion of up to two amino acids in CDR1;
2198 - the replacement, addition or deletion of up to two amino acids in CDR2; and/or
2199 - the replacement, addition or deletion of up to one amino acid in CDR3.
2200
2201 Embodiment 266: The VHH antibody domain or fragment thereof according to any one of
2202 embodiments 250 to 260, wherein the modification in (f) is
2203 - the replacement, addition or deletion of up to two amino acids in CDR1 and/or
2204 - the replacement, addition or deletion of up to two amino acids in CDR2;
2205 wherein the sequence of CDR3 is unmodified.
2206
2207 As the skilled person is aware, "unmodified" means unmodified compared to the sequence in
2208 the Table of CDRs.
2209
2210 Embodiment 267: The VHH antibody domain or fragment thereof according to any one of
2211 embodiments 250 to 260, wherein the modification in (f) is
2212 - the replacement, addition or deletion of up to two amino acids in CDR1,
2213 wherein the sequence of CDR2 and CDR3 is unmodified. 2214
2215 Embodiment 268: The VHH antibody domain or fragment thereof according to any one of
2216 embodiments 250 to 260, wherein the modification in (f) is
2217 - the replacement, addition or deletion of up to two amino acids in CDR2,
2218 wherein the sequence of CDR1 and CDR3 is unmodified.
2219
2220 Embodiment 269: The VHH antibody domain or fragment thereof according to any one of
2221 embodiments 250 to 260, wherein the modification in (f) is
2222 - the replacement, addition or deletion of up to one amino acid in CDR1;
2223 - the replacement, addition or deletion of up to one amino acid in CDR2; and/or
2224 - the replacement, addition or deletion of up to one amino acid in CDR3.
2225
2226 Embodiment 270: The VHH antibody domain or fragment thereof according to any one of
2227 embodiments 250 to 260, wherein the modification in (f) is
2228 - the replacement, addition or deletion of one amino acid in CDR1 and/or
2229 - the replacement, addition or deletion of one amino acid in CDR2;
2230 wherein the sequence of CDR3 is unmodified.
2231
2232 Embodiment 271 : The VHH antibody domain or fragment thereof according to any one of
2233 embodiments 250 to 260, wherein the modification in (f) is
2234 - the replacement, addition or deletion of one amino acid in CDR1,
2235 wherein the sequence of CDR2 and CDR3 is unmodified.
2236
2237 Embodiment 272: The VHH antibody domain or fragment thereof according to any one of
2238 embodiments 250 to 260, wherein the modification in (f) is
2239 - the replacement, addition or deletion of one amino acid in CDR2,
2240 wherein the sequence of CDR1 and CDR3 is unmodified.
2241
2242 Embodiment 273: The VHH antibody domain or fragment thereof according to any one of
2243 embodiments 250 to 272, wherein the modification in (f) comprises only the replacement, but
2244 not the addition or deletion of amino acids.
2245
2246 Embodiment 274: The VHH antibody domain or fragment thereof according to any one of
2247 embodiments 250 to 273, wherein said replacement is a conservative amino acid replacement. 2248
2249 Embodiment 275: The VHH antibody domain or fragment thereof according to any one of
2250 embodiments 189 to 274, wherein said fragment consists of at least 100 amino acids.
2251
2252 Embodiment 276: The VHH antibody domain or fragment thereof according to any one of
2253 embodiments 189 to 274, wherein said fragment consists of at least 105 amino acids.
2254
2255 Embodiment 277: The VHH antibody domain or fragment thereof according to any one of
2256 embodiments 189 to 274, wherein said fragment consists of at least 110 amino acids.
2257
2258 Embodiment 278: The VHH antibody domain or fragment thereof according to any one of
2259 embodiments 189 to 274, wherein said fragment consists of at least 115 amino acids.
2260
2261 Embodiment 279: The VHH antibody domain or fragment thereof according to any one of
2262 embodiments 189 to 278, wherein said VHH antibody domain is an anti-IL-18RP VHH
2263 antibody domain.
2264
2265 Embodiment 280: The VHH antibody domain or fragment thereof according to any one of
2266 embodiments 189 to 279, wherein said VHH antibody domain is specific for IL-18RP.
2267
2268 Embodiment 281 : The VHH antibody domain or fragment thereof according to any one of
2269 embodiments 189 to 280, wherein said VHH antibody domain or fragment thereof binds to IL-
2270 18RP.
2271
2272 Embodiment 282: The VHH antibody domain or fragment thereof according to any one of
2273 embodiments 189 to 281, wherein said VHH antibody domain or fragment thereof binds
2274 specifically to IL-18Rp.
2275
2276 Embodiment 283: The VHH antibody domain or fragment thereof according to any one of
2277 embodiments 189 to 282, wherein said VHH antibody domain or fragment thereof does not
2278 bind to IL-18Ra.
2279 2280 Embodiment 284: The VHH antibody domain or fragment thereof according to any one of
2281 embodiments 189 to 283, wherein said VHH antibody domain or fragment thereof is capable
2282 of specifically binding to IL-18RP ECD.
2283
2284 Embodiment 285: The VHH antibody domain or fragment thereof according to any one of
2285 embodiments 189 to 284, wherein said VHH antibody domain or fragment thereof binds to
2286 recombinant human IL-18RP ECD with a KD of 1x1 O'6 M or stronger.
2287
2288 Embodiment 286 The VHH antibody domain or fragment thereof according to any one of
2289 embodiments 189 to 284, wherein said VHH antibody domain or fragment thereof binds to
2290 recombinant human IL-18RP ECD with a KD of 1x1 O'7 M or stronger.
2291
2292 Embodiment 287: The VHH antibody domain or fragment thereof according to any one of
2293 embodiments 189 to 284, wherein said VHH antibody domain or fragment thereof binds to
2294 recombinant human IL-18RP ECD with a KD of 5x1 O'8 M or stronger.
2295
2296 Embodiment 288: The VHH antibody domain or fragment thereof according to any one of
2297 embodiments 189 to 284, wherein said VHH antibody domain or fragment thereof binds to
2298 recombinant human IL-18RP ECD with a KD of 1.5x1 O'8 M or stronger.
2299
2300 Embodiment 289: The VHH antibody domain or fragment thereof according to any one of
2301 embodiments 189 to 284, wherein said VHH antibody domain or fragment thereof binds to
2302 recombinant human IL-18RP ECD with a KD of 1x1 O'8 M or stronger.
2303
2304 Embodiment 290: The VHH antibody domain or fragment thereof according to any one of
2305 embodiments 189 to 284, wherein said VHH antibody domain or fragment thereof binds to
2306 recombinant human IL-18RP ECD with a KD of 5x1 O'9 M or stronger.
2307
2308 Embodiment 291 : The VHH antibody domain or fragment thereof according to any one of
2309 embodiments 189 to 284, wherein said VHH antibody domain or fragment thereof binds to
2310 recombinant human IL-18RP ECD with a KD of 1x1 O'9 M or stronger.
2311
2312 Embodiment 292: The VHH antibody domain or fragment thereof according to any one of
2313 embodiments 189 to 291, wherein said fragment of said VHH antibody domain binds to 2314 recombinant human IL-18RP ECD with at least 90% of the affinity (as determined by KD value)
2315 with which said VHH antibody domain binds to recombinant human IL-18RP ECD.
2316
2317 Embodiment 293: The VHH antibody domain or fragment thereof according to any one of
2318 embodiments 189 to 292, wherein said fragment of said VHH antibody domain binds to IL-
2319 18Ra ECD with an affinity (as determined from the KD value) that is at least equal to the
2320 affinity with which VHH2 (SEQ ID NO: 2) binds to IL-18Ra ECD or stronger. Such binding
2321 can be determined by in vitro binding experiments as described in Example 1 below (by
2322 biolayer interferometry).
2323
2324 Embodiment 294: The VHH antibody domain or fragment thereof according to any one of
2325 embodiments 189 to 211 or 250 to 293, wherein in (e) and (f) the VHH antibody domain or
2326 fragment thereof binds to recombinant human IL-18RP ECD with an affinity (KD value) that
2327 is by not more than a factor of 10 weaker than the binding of the corresponding VHH antibody
2328 domain without modification.
2329
2330 Embodiment 295: The VHH antibody domain or fragment thereof according to any one of
2331 embodiments 189 to 211 or 250 to 293, wherein in (e) and (f) the VHH antibody domain or
2332 fragment thereof binds to recombinant human IL-18RP ECD with an affinity (KD value) that
2333 is by not more than a factor of 5 weaker than the binding of the corresponding VHH antibody
2334 domain without modification.
2335
2336 Embodiment 296: The VHH antibody domain or fragment thereof according to any one of
2337 embodiments 189 to 211 or 250 to 293, wherein in (e) and (f) the VHH antibody domain or
2338 fragment thereof binds to recombinant human IL-18RP ECD with an affinity (KD value) that
2339 is by not more than a factor of 2 weaker than the binding of the corresponding VHH antibody
2340 domain without modification.
2341
2342 Embodiment 297: The VHH antibody domain or fragment thereof according to any one of
2343 embodiments 189 to 211 or 250 to 293, wherein in (e) and (f) the VHH antibody domain or
2344 fragment thereof binds to recombinant human IL-18RP ECD with an affinity (KD value) that
2345 is by not more than a factor of 1.5 weaker than the binding of the corresponding VHH antibody
2346 domain without modification.
2347 2348 Embodiment 298: The VHH antibody domain or fragment thereof according to any one of
2349 embodiments 189 to 211 or 250 to 297, wherein in (e) and (f) the VHH antibody domain or
2350 fragment thereof binds to recombinant human IL-18RP ECD with an affinity (KD value) that
2351 is by not more than a factor of 10 stronger than the binding of the corresponding VHH antibody
2352 domain without modification.
2353
2354 Embodiment 299: The VHH antibody domain or fragment thereof according to any one of
2355 embodiments 189 to 211 or 250 to 297, wherein in (e) and (f) the VHH antibody domain or
2356 fragment thereof binds to recombinant human IL-18RP ECD with an affinity (KD value) that
2357 is by not more than a factor of 5 stronger than the binding of the corresponding VHH antibody
2358 domain without modification.
2359
2360 Embodiment 300: The VHH antibody domain or fragment thereof according to any one of
2361 embodiments 189 to 211 or 250 to 297, wherein in (e) and (f) the VHH antibody domain or
2362 fragment thereof binds to recombinant human IL-18RP ECD with an affinity (KD value) that
2363 is by not more than a factor of 2 stronger than the binding of the corresponding VHH antibody
2364 domain without modification.
2365
2366 Embodiment 301 : The VHH antibody domain or fragment thereof according to any one of
2367 embodiments 189 to 211 or 250 to 297, wherein in (e) and (f) the VHH antibody domain or
2368 fragment thereof binds to recombinant human IL-18RP ECD with an affinity (KD value) that
2369 is by not more than a factor of 1.5 stronger than the binding of the corresponding VHH antibody
2370 domain without modification.
2371
2372 Embodiment 302: The VHH antibody domain or fragment thereof according to any one of
2373 embodiments 212 to 301, wherein in (F) and (G) the VHH antibody domain binds to
2374 recombinant human IL-18RP ECD with an affinity (KD value) that is by not more than a factor
2375 of 10 weaker than the binding of the corresponding VHH antibody domain without
2376 modification.
2377
2378 Embodiment 303: The VHH antibody domain or fragment thereof according to any one of
2379 embodiments 212 to 301, wherein in (F) and (G) the VHH antibody domain binds to
2380 recombinant human IL-18RP ECD with an affinity (KD value) that is by not more than a factor
2381 of 5 weaker than the binding of the corresponding VHH antibody domain without modification. 2382
2383 Embodiment 304: The VHH antibody domain or fragment thereof according to any one of
2384 embodiments 212 to 301, wherein in (F) and (G) the VHH antibody domain binds to
2385 recombinant human IL-18RP ECD with an affinity (KD value) that is by not more than a factor
2386 of 2 weaker than the binding of the corresponding VHH antibody domain without modification.
2387
2388 Embodiment 305: The VHH antibody domain or fragment thereof according to any one of
2389 embodiments 189 to 301, wherein in (F) and (G) the VHH antibody domain binds to
2390 recombinant human IL-18RP ECD with an affinity (KD value) that is by not more than a factor
2391 of 1.5 weaker than the binding of the corresponding VHH antibody domain without
2392 modification.
2393
2394 Embodiment 306: The VHH antibody domain or fragment thereof according to any one of
2395 embodiments 212 to 305, wherein in (F) and (G) the VHH antibody domain binds to
2396 recombinant human IL-18RP ECD with an affinity (KD value) that is by not more than a factor
2397 of 10 stronger than the binding of the corresponding VHH antibody domain without
2398 modification.
2399
2400 Embodiment 307: The VHH antibody domain or fragment thereof according to any one of
2401 embodiments 212 to 305, wherein in (F) and (G) the VHH antibody domain binds to
2402 recombinant human IL-18RP ECD with an affinity (KD value) that is by not more than a factor
2403 of 5 stronger than the binding of the corresponding VHH antibody domain without
2404 modification.
2405
2406 Embodiment 308: The VHH antibody domain or fragment thereof according to any one of
2407 embodiments 212 to 305, wherein in (F) and (G) the VHH antibody domain binds to
2408 recombinant human IL-18RP ECD with an affinity (KD value) that is by not more than a factor
2409 of 2 stronger than the binding of the corresponding VHH antibody domain without
2410 modification.
2411
2412 Embodiment 309: The VHH antibody domain or fragment thereof according to any one of
2413 embodiments 212 to 305, wherein in (F) and (G) the VHH antibody domain binds to
2414 recombinant human IL-18RP ECD with an affinity (KD value) that is by not more than a factor 2415 of 1.5 stronger than the binding of the corresponding VHH antibody domain without
2416 modification.
2417
2418 Embodiment 310: The VHH antibody domain or fragment thereof according to any one of
2419 embodiments 212 to 309, wherein in (H) the affinity (KD value) of the binding of the VHH
2420 antibody domain to recombinant human IL-18RP ECD is by not more than a factor of 10 weaker
2421 than the affinity (KD value) of the binding to recombinant human IL-18RP ECD of a VHH
2422 antibody domain consisting of the sequence from the Table of VHH Sequences that has the
2423 highest degree of sequence identity with the sequence of said VHH antibody domain of (H).
2424 The degree of sequence identity can be determined by sequence alignment.
2425
2426 Embodiment 311 : The VHH antibody domain or fragment thereof according to any one of
2427 embodiments 212 to 309, wherein in (H) the affinity (KD value) of the binding of the VHH
2428 antibody domain to recombinant human IL-18RP ECD is by not more than a factor of 5 weaker
2429 than the affinity (KD value) of the binding to recombinant human IL-18RP ECD of a VHH
2430 antibody domain consisting of the sequence from the Table of VHH Sequences that has the
2431 highest degree of sequence identity with the sequence of said VHH antibody domain of (H).
2432 The degree of sequence identity can be determined by sequence alignment.
2433
2434 Embodiment 312: The VHH antibody domain or fragment thereof according to any one of
2435 embodiments 212 to 309, wherein in (H) the affinity (KD value) of the binding of the VHH
2436 antibody domain to recombinant human IL-18RP ECD is by not more than a factor of 2 weaker
2437 than the affinity (KD value) of the binding to recombinant human IL-18RP ECD of a VHH
2438 antibody domain consisting of the sequence from the Table of VHH Sequences that has the
2439 highest degree of sequence identity with the sequence of said VHH antibody domain of (H).
2440
2441 Embodiment 313: The VHH antibody domain or fragment thereof according to any one of
2442 embodiments 212 to 309, wherein in (H) the affinity (KD value) of the binding of the VHH
2443 antibody domain to recombinant human IL-18RP ECD is by not more than a factor of 1.5
2444 weaker than the affinity (KD value) of the binding to recombinant human IL-18RP ECD of a
2445 VHH antibody domain consisting of the sequence from the Table of VHH Sequences that has
2446 the highest degree of sequence identity with the sequence of said VHH antibody domain of (H).
2447 2448 Embodiment 314 The VHH antibody domain or fragment thereof according to any one of
2449 embodiments 212 to 313, wherein in (H) the affinity (KD value) of the binding of the VHH
2450 antibody domain to recombinant human IL-18RP ECD is by not more than a factor of 10
2451 stronger than the affinity (KD value) of the binding to recombinant human IL-18RP ECD of a
2452 VHH antibody domain consisting of the sequence from the Table of VHH Sequences that has
2453 the highest degree of sequence identity with the sequence of said VHH antibody domain of (H).
2454
2455 Embodiment 315: The VHH antibody domain or fragment thereof according to any one of
2456 embodiments 212 to 313, wherein in (H) the affinity (KD value) of the binding of the VHH
2457 antibody domain to recombinant human IL-18RP ECD is by not more than a factor of 5 stronger
2458 than the affinity (KD value) of the binding to recombinant human IL-18RP ECD of a VHH
2459 antibody domain consisting of the sequence from the Table of VHH Sequences that has the
2460 highest degree of sequence identity with the sequence of said VHH antibody domain of (H).
2461
2462 Embodiment 316: The VHH antibody domain or fragment thereof according to any one of
2463 embodiments 212 to 313, wherein in (H) the affinity (KD value) of the binding of the VHH
2464 antibody domain to recombinant human IL-18RP ECD is by not more than a factor of 2 stronger
2465 than the affinity (KD value) of the binding to recombinant human IL-18RP ECD of a VHH
2466 antibody domain consisting of the sequence from the Table of VHH Sequences that has the
2467 highest degree of sequence identity with the sequence of said VHH antibody domain of (H).
2468
2469 Embodiment 317: The VHH antibody domain or fragment thereof according to any one of
2470 embodiments 212 to 313, wherein in (H) the affinity (KD value) of the binding of the VHH
2471 antibody domain to recombinant human IL-18RP ECD is by not more than a factor of 1.5
2472 stronger than the affinity (KD value) of the binding to recombinant human IL-18RP ECD of a
2473 VHH antibody domain consisting of the sequence from the Table of VHH Sequences that has
2474 the highest degree of sequence identity with the sequence of said VHH antibody domain of (H).
2475
2476 Embodiment 318: The VHH antibody domain or fragment thereof according to any one of
2477 embodiments 279 to 317, wherein said KD value is determined in in vitro binding experiments
2478 through biolayer interferometry.
2479
2480 Embodiment 319: The VHH antibody domain or fragment thereof according to any one of
2481 embodiments 279 to 318, wherein said KD value is measured by kinetic measurements by 2482 biolayer interferometry at 25°C and 1000 rpm in KB Buffer (PBS + 0.1 % Tween-20 +
2483 1% BSA).
2484
2485 Embodiment 320: The VHH antibody domain or fragment thereof according to any one of
2486 embodiments 212 to 319, wherein said VHH antibody domain of (E) comprises one VHH
2487 sequence selected from the group consisting of VHH12, VHH13, VHH14, VHH15, VHH17,
2488 VHH18, VHH20, VHH21 and VHH22 shown in the Table of VHH Sequences.
2489
2490 Embodiment 321 : The VHH antibody domain or fragment thereof according to any one of
2491 embodiments 212 to 319, wherein said VHH antibody domain of (E) comprises one VHH
2492 sequence selected from the group consisting of VHH12, VHH14, VHH15, VHH17 and VHH22
2493 shown in the Table of VHH Sequences.
2494
2495 Embodiment 322: The VHH antibody domain or fragment thereof according to any one of
2496 embodiments 212 to 319, wherein said VHH antibody domain of (E) comprises one VHH
2497 sequence selected from the group consisting of VHH6 and VHH11 shown in the Table of VHH
2498 Sequences.
2499
2500 Embodiment 323: The VHH antibody domain or fragment thereof according to any one of
2501 embodiments 212 to 319, wherein said VHH antibody domain of (E) comprises one VHH
2502 sequence selected from the group consisting of VHH13, VHH16 and VHH22 shown in the
2503 Table of VHH Sequences.
2504
2505 Embodiment 324: The VHH antibody domain or fragment thereof according to any one of
2506 embodiments 212 to 319, wherein said VHH antibody domain of (E) comprises one VHH
2507 sequence selected from the group consisting of VHH12, VHH13, VHH15, VHH17, VHH18
2508 and VHH21 shown in the Table of VHH Sequences.
2509
2510 Embodiment 325: The VHH antibody domain or fragment thereof according to any one of
2511 embodiments 212 to 319, wherein said VHH antibody domain of (E) comprises one VHH
2512 sequence selected from the group consisting of VHH15 and VHH17 shown in the Table of
2513 VHH Sequences.
2514 2515 Embodiment 326: The VHH antibody domain or fragment thereof according to any one of
2516 embodiments 212 to 319, wherein said VHH antibody domain of (E) comprises the VHH
2517 sequence VHH12 shown in the Table of VHH Sequences.
2518
2519 Embodiment 327: The VHH antibody domain or fragment thereof according to any one of
2520 embodiments 212 to 319, wherein said VHH antibody domain of (E) comprises the VHH
2521 sequence VHH13 shown in the Table of VHH Sequences.
2522
2523 Embodiment 328: The VHH antibody domain or fragment thereof according to any one of
2524 embodiments 212 to 319, wherein said VHH antibody domain of (E) comprises the VHH
2525 sequence VHH14 shown in the Table of VHH Sequences.
2526
2527 Embodiment 329: The VHH antibody domain or fragment thereof according to any one of
2528 embodiments 212 to 319, wherein said VHH antibody domain of (E) comprises the VHH
2529 sequence VHH15 shown in the Table of VHH Sequences.
2530
2531 Embodiment 330: The VHH antibody domain or fragment thereof according to any one of
2532 embodiments 212 to 319, wherein said VHH antibody domain of (E) comprises the VHH
2533 sequence VHH16 shown in the Table of VHH Sequences.
2534
2535 Embodiment 331 : The VHH antibody domain or fragment thereof according to any one of
2536 embodiments 212 to 319, wherein said VHH antibody domain of (E) comprises the VHH
2537 sequence VHH17 shown in the Table of VHH Sequences.
2538
2539 Embodiment 332: The VHH antibody domain or fragment thereof according to any one of
2540 embodiments 212 to 319, wherein said VHH antibody domain of (E) comprises the VHH
2541 sequence VHH18 shown in the Table of VHH Sequences.
2542
2543 Embodiment 333: The VHH antibody domain or fragment thereof according to any one of
2544 embodiments 212 to 319, wherein said VHH antibody domain of (E) comprises the VHH
2545 sequence VHH20 shown in the Table of VHH Sequences.
2546 2547 Embodiment 334: The VHH antibody domain or fragment thereof according to any one of
2548 embodiments 212 to 319, wherein said VHH antibody domain of (E) comprises the VHH
2549 sequence VHH21 shown in the Table of VHH Sequences.
2550
2551 Embodiment 335: The VHH antibody domain or fragment thereof according to any one of
2552 embodiments 212 to 319, wherein said VHH antibody domain of (E) comprises the VHH
2553 sequence VHH22 shown in the Table of VHH Sequences.
2554
2555 Embodiment 336: The VHH antibody domain or fragment thereof according to any one of
2556 embodiments 189 to 211 or 250 to 335, wherein in (d) said VHH antibody domain or fragment
2557 thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of one
2558 VHH selected from the group consisting of VHH12, VHH13, VHH14, VHH15, VHH17,
2559 VHH18, VHH20, VHH21 or VHH22 as shown in the Table of CDRs.
2560
2561 Embodiment 337: The VHH antibody domain or fragment thereof according to any one of
2562 embodiments 189 to 211 or 250 to 335, wherein in (d) said VHH antibody domain or fragment
2563 thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of one
2564 VHH selected from the group consisting of VHH12, VHH14, VHH15, VHH17 or VHH22 as
2565 shown in the Table of CDRs.
2566
2567 Embodiment 338: The VHH antibody domain or fragment thereof according to any one of
2568 embodiments 189 to 211 or 250 to 335, wherein in (d) said VHH antibody domain or fragment
2569 thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of VHH6
2570 or VHH11 as shown in the Table of CDRs.
2571
2572 Embodiment 339: The VHH antibody domain or fragment thereof according to any one of
2573 embodiments 189 to 211 or 250 to 335, wherein in (d) said VHH antibody domain or fragment
2574 thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of one
2575 VHH selected from the group consisting of VHH13, VHH16 or VHH22 as shown in the Table
2576 of CDRs.
2577
2578 Embodiment 340: The VHH antibody domain or fragment thereof according to any one of
2579 embodiments 189 to 211 or 250 to 335, wherein in (d) said VHH antibody domain or fragment
2580 thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of one 2581 VHH selected from the group consisting of VHH 12, VHH13, VHH15, VHH17, VHH18 or
2582 VHH21 as shown in the Table of CDRs.
2583
2584 Embodiment 341 : The VHH antibody domain or fragment thereof according to any one of
2585 embodiments 189 to 211 or 250 to 335, wherein in (d) said VHH antibody domain or fragment
2586 thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of one
2587 VHH selected from the group consisting of VHH15 or VHH17 as shown in the Table of CDRs.
2588
2589 Embodiment 342: The VHH antibody domain or fragment thereof according to any one of
2590 embodiments 189 to 211 or 250 to 335, wherein in (d) said VHH antibody domain or fragment
2591 thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of
2592 VHH12 as shown in the Table of CDRs.
2593
2594 Embodiment 343: The VHH antibody domain or fragment thereof according to any one of
2595 embodiments 189 to 211 or 250 to 335, wherein in (d) said VHH antibody domain or fragment
2596 thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of
2597 VHH13 as shown in the Table of CDRs.
2598
2599 Embodiment 344: The VHH antibody domain or fragment thereof according to any one of
2600 embodiments 189 to 211 or 250 to 335, wherein in (d) said VHH antibody domain or fragment
2601 thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of
2602 VHH14 as shown in the Table of CDRs.
2603
2604 Embodiment 345: The VHH antibody domain or fragment thereof according to any one of
2605 embodiments 189 to 211 or 250 to 335, wherein in (d) said VHH antibody domain or fragment
2606 thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of
2607 VHH15 as shown in the Table of CDRs.
2608
2609 Embodiment 346: The VHH antibody domain or fragment thereof according to any one of
2610 embodiments 189 to 211 or 250 to 335, wherein in (d) said VHH antibody domain or fragment
2611 thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of
2612 VHH16 as shown in the Table of CDRs.
2613 2614 Embodiment 347: The VHH antibody domain or fragment thereof according to any one of
2615 embodiments 189 to 211 or 250 to 335, wherein in (d) said VHH antibody domain or fragment
2616 thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of
2617 VHH17 as shown in the Table of CDRs.
2618
2619 Embodiment 348: The VHH antibody domain or fragment thereof according to any one of
2620 embodiments 189 to 211 or 250 to 335, wherein in (d) said VHH antibody domain or fragment
2621 thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of
2622 VHH18 as shown in the Table of CDRs.
2623
2624 Embodiment 349: The VHH antibody domain or fragment thereof according to any one of
2625 embodiments 189 to 211 or 250 to 335, wherein in (d) said VHH antibody domain or fragment
2626 thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of
2627 VHH20 as shown in the Table of CDRs.
2628
2629 Embodiment 350: The VHH antibody domain or fragment thereof according to any one of
2630 embodiments 189 to 211 or 250 to 335, wherein in (d) said VHH antibody domain or fragment
2631 thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of
2632 VHH21 as shown in the Table of CDRs.
2633
2634 Embodiment 351: The VHH antibody domain or fragment thereof according to any one of
2635 embodiments 189 to 211 or 250 to 335, wherein in (d) said VHH antibody domain or fragment
2636 thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of
2637 VHH22 as shown in the Table of CDRs.
2638
2639 Embodiment 352: The VHH antibody domain or fragment thereof according to any one of
2640 embodiments 189 to 351, wherein said VHH antibody domain or fragment thereof competes
2641 with VHH15 for binding to recombinant human IL-18RP ECD.
2642
2643 Embodiment 353: The VHH antibody domain or fragment thereof according to any one of
2644 embodiments 189 to 351, wherein said VHH antibody domain or fragment thereof partially
2645 competes with VHH15 for binding to recombinant human IL-18RP ECD.
2646 2647 Embodiment 354: The VHH antibody domain or fragment thereof according to any one of
2648 embodiments 189 to 353, wherein said VHH antibody domain or fragment thereof does not
2649 compete with VHH2 for binding to recombinant human IL-18Ra ECD.
2650
2651 Embodiment 355: The VHH antibody domain or fragment thereof according to any one of
2652 embodiments 189 to 354, wherein said humanization is by germlining.
2653
2654 Embodiment 356: The VHH antibody domain or fragment thereof according to embodiment
2655 355, wherein said germlining involves
2656 - identifying the human VH germline sequence that is closest to the sequence to be
2657 humanized with respect to its sequence similarity; and
2658 - replacing amino acid(s) in the sequence to be humanized by the amino acid(s) at the
2659 corresponding sequence position(s) in the closest human VH germline sequence.
2660
2661 Sequence similarity and corresponding sequence positions can be determined by sequence
2662 alignment as described above.
2663
2664 Embodiment 357: The VHH antibody domain or fragment thereof according to embodiment
2665 355, wherein said germlining consists of
2666 - identifying the human VH germline sequence that is closest to the sequence to be
2667 humanized with respect to its sequence similarity; and
2668 - replacing amino acid(s) in the sequence to be humanized by the amino acid(s) at the
2669 corresponding sequence position(s) in the closest human VH germline sequence.
2670
2671 Embodiment 358: The VHH antibody domain or fragment thereof according to any one of
2672 embodiments 189 to 357, wherein said VHH antibody domain (resp. fragment thereof) with
2673 humanization binds to human IL-18RP ECD with an affinity (KD value) that is not weaker by
2674 a factor of more than 10 compared to the binding of a corresponding VHH antibody domain
2675 (resp. fragment thereof) without humanization to human IL-18RP ECD.
2676
2677 As a skilled person understands, the term "corresponding VHH antibody domain without
2678 humanization" refers to a VHH antibody domain that differs only by the amino acid changes
2679 introduced in order to carry out said humanization, but that is otherwise identical.
2680 2681 Embodiment 359: The VHH antibody domain or fragment thereof according to any one of
2682 embodiments 189 to 357, wherein said VHH antibody domain (resp. fragment thereof) with
2683 humanization binds to human IL-18RP ECD with an affinity (KD value) that is not weaker by
2684 a factor of more than 5 compared to the binding of a corresponding VHH antibody domain
2685 (resp. fragment thereof) without humanization to human IL-18RP ECD.
2686
2687 Embodiment 360: The VHH antibody domain or fragment thereof according to any one of
2688 embodiments 189 to 357, wherein said VHH antibody domain (resp. fragment thereof) with
2689 humanization binds to human IL-18RP ECD with an affinity (KD value) that is not weaker by
2690 a factor of more than 2 compared to the binding of a corresponding VHH antibody domain
2691 (resp. fragment thereof) without humanization to human IL-18RP ECD.
2692
2693 Embodiment 361 : The VHH antibody domain or fragment thereof according to any one of
2694 embodiments 189 to 357, wherein said VHH antibody domain (resp. fragment thereof) with
2695 humanization binds to human IL-18RP ECD with an affinity (KD value) that is not weaker than
2696 the binding of a corresponding VHH antibody domain (resp. fragment thereof) without
2697 humanization to human IL-18RP ECD.
2698
2699 Embodiment 362: The VHH antibody domain or fragment thereof according to any one of
2700 embodiments 358 to 361, wherein said affinity is determined by KD measurement.
2701
2702 Embodiment 363: The VHH antibody domain or fragment thereof according to any one of
2703 embodiments 212 to 362, wherein said VHH antibody domain comprises a VHH antibody
2704 domain according to (E), (F) or (G)/said fragment of a VHH antibody domain comprises a
2705 fragment of a VHH antibody domain according to (E), (F) or (G).
2706
2707 Embodiment 364: The VHH antibody domain or fragment thereof according to any one of
2708 embodiments 212 to 362, wherein said VHH antibody domain comprises a VHH antibody
2709 domain according to (E), (F) or (H)/said fragment of a VHH antibody domain comprises a
2710 fragment of a VHH antibody domain according to (E), (F) or (H).
2711
2712 Embodiment 365: The VHH antibody domain or fragment thereof according to any one of
2713 embodiments 212 to 362, wherein said VHH antibody domain comprises a VHH antibody 2714 domain according to (E), (G) or (H)/said fragment of a VHH antibody domain comprises a
2715 fragment of a VHH antibody domain according to (E), (G) or (H).
2716
2717 Embodiment 366: The VHH antibody domain or fragment thereof according to any one of
2718 embodiments 212 to 362, wherein said VHH antibody domain comprises a VHH antibody
2719 domain according to (E) or (F)/said fragment of a VHH antibody domain comprises a fragment
2720 of a VHH antibody domain according to (E) or (F).
2721
2722 Embodiment 367: The VHH antibody domain or fragment thereof according to any one of
2723 embodiments 212 to 362, wherein said VHH antibody domain comprises a VHH antibody
2724 domain according to (E) or (G)/said fragment of a VHH antibody domain comprises a fragment
2725 of a VHH antibody domain according to (E) or (G).
2726 1 1 Embodiment 368: The VHH antibody domain or fragment thereof according to any one of
2728 embodiments 212 to 362, wherein said VHH antibody domain comprises a VHH antibody
2729 domain according to (E) or (H)/said fragment of a VHH antibody domain comprises a fragment
2730 of a VHH antibody domain according to (E) or (H).
2731
2732 Embodiment 369: The VHH antibody domain or fragment thereof according to any one of
2733 embodiments 212 to 362, wherein said VHH antibody domain comprises a VHH antibody
2734 domain according to (E)/said fragment of a VHH antibody domain comprises a fragment of a
2735 VHH antibody domain according to (E).
2736
2737 Embodiment 370: The VHH antibody domain or fragment thereof according to any one of
2738 embodiments 212 to 362, wherein said VHH antibody domain comprises a VHH antibody
2739 domain according to (F)/said fragment of a VHH antibody domain comprises a fragment of a
2740 VHH antibody domain according to (F).
2741
2742 Embodiment 371 : The VHH antibody domain or fragment thereof according to any one of
2743 embodiments 189 to 211 or 250 to 370, wherein said VHH antibody domain or fragment thereof
2744 comprises complementarity determining regions according to (d) or (e).
2745 2746 Embodiment 372: The VHH antibody domain or fragment thereof according to any one of
2747 embodiments 189 to 211 or 250 to 370, wherein said VHH antibody domain or fragment thereof
2748 comprises complementarity determining regions according to (d) or (f).
2749
2750 Embodiment 373: The VHH antibody domain or fragment thereof according to any one of
2751 embodiments 189 to 211 or 250 to 370, wherein said VHH antibody domain or fragment thereof
2752 comprises complementarity determining regions according to (d).
2753
2754 Embodiment 374: The VHH antibody domain or fragment thereof according to any one of
2755 embodiments 189 to 211 or 250 to 370, wherein said VHH antibody domain or fragment thereof
2756 comprises complementarity determining regions according to (e).
2757
2758 Seventh aspect of the present disclosure (also referred to as "Embodiment 375"): According to
2759 a seventh aspect, the present disclosure relates to a compound comprising
2760 - a VHH antibody domain or fragment thereof according to any one of embodiments 1 to
2761 188.
2762
2763 Eighth aspect of the present disclosure (also referred to as "Embodiment 376"): According to a
2764 eighth aspect, the present disclosure relates to a compound comprising
2765 - a VHH antibody domain or fragment thereof according to any one of claims 189 to 374.
2766
2767 Nineth aspect of the present disclosure (also referred to as "Embodiment 377"): According to a
2768 nineth aspect, the present disclosure relates to a compound comprising
2769 - a first binding module which is a VHH antibody domain or fragment thereof, wherein
2770 (a) said VHH antibody domain or fragment thereof comprises the
2771 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH
2772 selected from the group consisting of VHH1, VHH2, VHH3, VHH4, VHH5,
2773 VHH6, VHH8, VHH9, VHH10 and VHH11 as shown in the Table of CDR;
2774 (b) said VHH antibody domain or fragment thereof comprises the
2775 complementarity determining regions CDR1, CDR2 and CDR3 as defined in
2776 (a) with modification, wherein the modification is that the sequence of at least
2777 one of CDR1, CDR2 and CDR3 is humanized; or 2778 (c) said VHH antibody domain or fragment thereof comprises the
2779 complementarity determining regions CDR1, CDR2 and CDR3 as defined in
2780 (a) with modification, wherein the modification is
2781 - the replacement, addition or deletion of up to three amino acids in
2782 CDR1,
2783 - the replacement, addition or deletion of up to three amino acids in
2784 CDR2 and/or
2785 - the replacement, addition or deletion of up to three amino acids in
2786 CDR3;
2787 - a second binding module which is a VHH antibody domain or a fragment thereof, wherein
2788 (d) said VHH antibody domain or fragment thereof comprises the
2789 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH
2790 selected from the group consisting of VHH12, VHH13, VHH14, VHH15,
2791 VHH16, VHH17, VHH18, VHH20, VHH21 and VHH22 as shown in the
2792 Table of CDRs;
2793 (e) said VHH antibody domain or fragment thereof comprises the
2794 complementarity determining regions CDR1, CDR2 and CDR3 as defined in
2795 (d) with modification, wherein the modification is that the sequence of at least
2796 one of CDR1, CDR2 and CDR3 is humanized; or
2797 (f) said VHH antibody domain or fragment thereof comprises the
2798 complementarity determining regions CDR1, CDR2 and CDR3 as defined in
2799 (d) with modification, wherein the modification is
2800 - the replacement, addition or deletion of up to three amino acids in
2801 CDR1,
2802 - the replacement, addition or deletion of up to three amino acids in
2803 CDR2 and/or
2804 - the replacement, addition or deletion of up to three amino acids in
2805 CDR3.
2806
2807 To the seventh to nineth aspect of the present disclosure and the embodiments referring thereto,
2808 the same explanations and definitions apply accordingly as for the first to sixth aspects of the
2809 present disclosure and the embodiments referring thereto.
2810 2811 For embodiment 377 and embodiments referring thereto, with respect to said first binding
2812 module further embodiments of said VHH antibody domain or fragment thereof of said first
2813 binding module are as defined in embodiments 1 to 188.
2814
2815 For embodiment 377 and embodiments referring thereto, with respect to said second binding
2816 module further embodiments of said VHH antibody domain or fragment thereof of said second
2817 binding module are as defined in embodiments 189 to 374.
2818
2819 Tenth aspect of the present disclosure (also referred to as "Embodiment 378"): According to a
2820 tenth aspect, the present disclosure relates to a compound comprising
2821 - a first binding module which is a VHH antibody domain or fragment thereof, wherein
2822 (A) said VHH antibody domain comprises the amino acid sequence of a VHH
2823 selected from the group consisting of VHH1, VHH2, VHH3, VHH4, VHH5,
2824 VHH6, VHH8, VHH9, VHH10 and VHH11 as shown in the Table of VHH
2825 Sequences;
2826 (B) said VHH antibody domain comprises a VHH sequence as defined in (A) with
2827 modification, wherein the modification is that said sequence is humanized;
2828 (C) said VHH antibody domain comprises a VHH sequence as defined in (A) with
2829 modification, wherein the modification is the replacement, addition or
2830 deletion of up to 25 amino acids; or
2831 (D) said VHH antibody domain comprises a VHH sequence that is at least 75%
2832 identical to a VHH sequence referred to in (A);
2833 - a second binding module which is a VHH antibody domain or a fragment thereof, wherein
2834 (E) said VHH antibody domain comprises the amino acid sequence of a VHH
2835 selected from the group consisting of VHH12, VHH13, VHH14, VHH15,
2836 VHH16, VHH17, VHH18, VHH20, VHH21 and VHH22 as shown in the
2837 Table of VHH Sequences;
2838 (F) said VHH antibody domain comprises a VHH sequence as defined in (E) with
2839 modification, wherein the modification is that said sequence is humanized;
2840 (G) said VHH antibody domain comprises a VHH sequence as defined in (E) with
2841 modification, wherein the modification is the replacement, addition or
2842 deletion of up to 25 amino acids; or
2843 (H) said VHH antibody domain comprises a VHH sequence that is at least 75%
2844 identical to a VHH sequence referred to in (E). 2845
2846 To the tenth aspect of the present disclosure and the embodiments referring thereto, the same
2847 explanations and definitions apply accordingly as for the first to nineth aspects of the present
2848 disclosure and the embodiments referring thereto.
2849
2850 For embodiment 378 and embodiments referring thereto, with respect to said first binding
2851 module further embodiments of said VHH antibody domain or fragment thereof of said first
2852 binding module are as defined in embodiments 1 to 188.
2853
2854 For embodiment 378 and embodiments referring thereto, with respect to said second binding
2855 module further embodiments of said VHH antibody domain or fragment thereof of said second
2856 binding module are as defined in embodiments 189 to 374.
2857
2858 Eleventh aspect of the present disclosure (also referred to as "Embodiment 379"): According to
2859 an eleventh aspect, the present disclosure relates to a compound comprising
2860 - a first binding module which is a VHH antibody domain or fragment thereof, wherein
2861 (A) said VHH antibody domain consists of the amino acid sequence of a VHH
2862 selected from the group consisting of VHH1, VHH2, VHH3, VHH4, VHH5,
2863 VHH6, VHH8, VHH9, VHH10 and VHH11 as shown in the Table of VHH
2864 Sequences;
2865 (B) said VHH antibody domain consists of a VHH sequence as defined in (A)
2866 with modification, wherein the modification is that said sequence is
2867 humanized;
2868 (C) said VHH antibody domain consists of a VHH sequence as defined in (A)
2869 with modification, wherein the modification is the replacement, addition or
2870 deletion of up to 25 amino acids; or
2871 (D) said VHH antibody domain consists of a VHH sequence that is at least 75%
2872 identical to a VHH sequence referred to in (A);
2873 - a second binding module which is a VHH antibody domain or a fragment thereof, wherein
2874 (E) said VHH antibody domain consists of the amino acid sequence of a VHH
2875 selected from the group consisting of VHH12, VHH13, VHH14, VHH15,
2876 VHH16, VHH17, VHH18, VHH20, VHH21 and VHH22 as shown in the
2877 Table of VHH Sequences; 2878 (F) said VHH antibody domain consists of a VHH sequence as defined in (E)
2879 with modification, wherein the modification is that said sequence is
2880 humanized;
2881 (G) said VHH antibody domain consists of a VHH sequence as defined in (E)
2882 with modification, wherein the modification is the replacement, addition or
2883 deletion of up to 25 amino acids; or
2884 (H) said VHH antibody domain consists of a VHH sequence that is at least 75%
2885 identical to a VHH sequence referred to in (E).
2886
2887 To the eleventh aspect of the present disclosure and the embodiments referring thereto, the same
2888 explanations and definitions apply accordingly as for the first to tenth aspects of the present
2889 disclosure and the embodiments referring thereto.
2890 For embodiment 379 and embodiments referring thereto, with respect to said first binding
2891 module further embodiments of said VHH antibody domain or fragment thereof of said first
2892 binding module are as defined in embodiments 1 to 188.
2893
2894 For embodiment 379 and embodiments referring thereto, with respect to said second binding
2895 module further embodiments of said VHH antibody domain or fragment thereof of said second
2896 binding module are as defined in embodiments 189 to 374.
2897
2898 "Compound", as used in the present disclosure, is not particularly limited and refers to a
2899 chemical entity of any chemical class, provided that it includes the binding module(s) as defined
2900 above. Thus, the compound can e.g. be an organic compound or a compound composed of an
2901 organic and an inorganic part, it can be a protein composed of a single amino acid chain, a
2902 protein composed of multiple amino acid chains that are either non-covalently or covalently
2903 associated, or a non-covalent complex including an inorganic component. The compound can
2904 consist of the amino acid sequence of the binding module(s) referred to in the above
2905 embodiments alone or it can in addition include further amino acid(s) that may be covalently
2906 or non-covalently attached, or it can be associated with inorganic components. Preferably, the
2907 compound is a molecule.
2908
2909 For example, in embodiment 375, with optional modifications from embodiments 1 to 188 and
2910 further embodiments referring to embodiment 375, (resp. in embodiment 376, with optional
2911 modifications from embodiments 189 to 374 and further embodiments referring to embodiment 2912 376), the compound can be e.g. a monovalent, monospecific antibody molecule in which an
2913 anti-IL-18Ra VHH according to the present disclosure (resp. an anti-IL-18RP VHH according
2914 to the present disclosure) is linked covalently to an Fc region of an IgG. Alternatively, it could
2915 be a bispecific molecule in which an anti-IL-18Ra VHH according to the present disclosure
2916 (resp. an anti-IL-18RP VHH according to the present disclosure) is linked covalently to an IgGl
2917 antibody lacking one of its "arms", such that the molecule has two binding modules, namely
2918 the anti-IL-18Ra VHH according to the present disclosure (resp. anti-IL-18Rp VHH according
2919 to the present disclosure) and the remaining "original" binding module of the "one-armed" IgGl
2920 antibody. Or in another example, the compound can be a bispecific molecule comprising the
2921 anti-IL-18Ra VHH according to the present disclosure (resp. anti-IL-18RP VHH according to
2922 the present disclosure) and a targeting module.
2923
2924 For example, in embodiments 377 to 379 (with optional modifications for the first binding
2925 module defined in embodiments 1 to 188 and optional modifications for the second binding
2926 module defined in embodiments 189 to 374, with further optional modifications defined in the
2927 embodiments referring to embodiments 377 to 379), the compound may e.g. be an antibody
2928 with two binding modules (an anti-IL-18Ra VHH according to the present disclosure and an
2929 anti-IL-18RP VHH according to the present disclosure) prepared in the SEED format, resulting
2930 in a bispecific antibody with a structure e.g. as shown in Fig. 4A (left). The compound of
2931 embodiment 377 to 379 may in addition comprise further molecular components, e.g. further
2932 copies of the first and second bindings modules as exemplified in Fig. 4A (middle and right)
2933 where molecules with two copies of the first binding module and two copies of the second
2934 binding module in different molecular arrangements are shown. As the skilled person will
2935 understand, many other formats of the compound are possible, provided that the resulting
2936 compound format does not interfere with the function of the VHH antibody domain(s) or
2937 fragment(s) thereof according to the invention (i.e. in the case of the compound of embodiment
2938 377 to 379: the molecular format does not interfere with the binding of the first binding module
2939 to IL18Ra and the binding of the second binding module to IL18RP, as described in the present
2940 disclosure).
2941
2942 The compound of the present disclosure can be prepared by standard methods of genetic
2943 engineering and recombinant protein technology known to the skilled person (see e.g. Green
2944 and Sambrook, "Molecular Cloning: A Laboratory Manual", 2014; Coligan et al., "Current 2945 Protocols in Protein Science", 1997). Exemplary methods are also described in the Examples
2946 section of the present disclosure.
2947
2948 In cases where the compound cannot be expressed in a single piece, individual parts can be
2949 prepared individually and later either covalently coupled, for example by a chemical reaction
2950 with appropriate reactive groups (e.g. linkage by maleimide chemistry) or by enzymatic linkage
2951 (e.g. transglutaminase-catalyzed linkage). For example, the VHH antibody domain(s) or
2952 fragment(s) thereof can be prepared by recombinant protein expression and subsequently linked
2953 to an antibody or antibody fragment, resulting in a bispecific antibody compound as described
2954 in the Examples section.
2955
2956 If the compound comprises components that are not biomolecules (such as a peptide mimetics
2957 or a small molecule), these components may be obtained e.g. by standard methods of synthetic
2958 organic chemistry.
2959
2960 Embodiment 380: The compound according to embodiment 377,
2961 - wherein said VHH antibody domain or fragment thereof defined in (a) comprises the
2962 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH selected
2963 from the group consisting of VHH1, VHH2, VHH5, VHH6, VHH8, VHH9 and VHH10
2964 as shown in the Table of CDRs and
2965 - wherein said VHH antibody domain or fragment thereof defined in (d) comprises the
2966 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH selected
2967 from the group consisting of VHH12, VHH13, VHH14, VHH15, VHH17, VHH18,
2968 VHH20, VHH21 and VHH22 as shown in the Table of CDRs, wherein said VHH
2969 antibody domain or fragment thereof defined in (d) is selected as follows:
2970 if the VHH antibody domain of (a) or the fragment thereof comprises the
2971 complementarity determining regions CDR1, CDR2 and CDR3 of VHH1, then
2972 the VHH antibody domain of (d) or the fragment thereof comprises the
2973 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH
2974 selected from the group consisting of VHH12, VHH13, VHH15, VHH17,
2975 VHH20, VHH21 and VHH22 as shown in the Table of CDRs;
2976 if the VHH antibody domain of (a) or the fragment thereof comprises the
2977 complementarity determining regions CDR1, CDR2 and CDR3 of VHH2, then
2978 the VHH antibody domain of (d) or the fragment thereof comprises the 2979 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH
2980 selected from the group consisting of VHH12, VHH13, VHH15, VHH17,
2981 VHH18, VHH20, VHH21 and VHH22 as shown in the Table of CDRs;
2982 if the VHH antibody domain of (a) or the fragment thereof comprises the
2983 complementarity determining regions CDR1, CDR2 and CDR3 of VHH5, then
2984 the VHH antibody domain of (d) or the fragment thereof comprises the
2985 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH
2986 selected from the group consisting of VHH13 and VHH14 as shown in the Table
2987 of CDRs;
2988 if the VHH antibody domain of (a) or the fragment thereof comprises the
2989 complementarity determining regions CDR1, CDR2 and CDR3 of VHH6, then
2990 the VHH antibody domain of (d) or the fragment thereof comprises the
2991 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH
2992 selected from the group consisting of VHH17, VHH20, VHH21 and VHH22 as
2993 shown in the Table of CDRs;
2994 if the VHH antibody domain of (a) or the fragment thereof comprises the
2995 complementarity determining regions CDR1, CDR2 and CDR3 of VHH8, then
2996 the VHH antibody domain of (d) or the fragment thereof comprises the
2997 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH
2998 selected from the group consisting of VHH12, VHH13, VHH17, VHH18, VHH20
2999 and VHH21 as shown in the Table of CDRs;
3000 if the VHH antibody domain of (a) or the fragment thereof comprises the
3001 complementarity determining regions CDR1, CDR2 and CDR3 of VHH9, then
3002 the VHH antibody domain of (d) or the fragment thereof comprises the
3003 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH
3004 selected from the group consisting of VHH12, VHH13, VHH15, VHH17,
3005 VHH18, VHH20, VHH21 and VHH22 as shown in the Table of CDRs;
3006 if the VHH antibody domain of (a) or the fragment thereof comprises the
3007 complementarity determining regions CDR1, CDR2 and CDR3 of VHHIO, then
3008 the VHH antibody domain of (d) or the fragment thereof comprises the
3009 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH
3010 selected from the group consisting of VHH13, VHH20 and VHH21 as shown in
3011 the Table of CDRs.
3012 3013 Thus, according this embodiment, the compound of embodiment 377 (and the embodiments
3014 referring thereto) can comprise any of the combinations VHHa and VHHP shown in Fig. 4B in
3015 green (surrogate agonists triggering either a normalized NFKB reporter activation of more than
3016 50% relative to IL18 or displaying potencies of less than 0.1 nM).
3017
3018 Embodiment 381 : The compound according to embodiment 377,
3019 - wherein said VHH antibody domain or fragment thereof defined in (a) comprises the
3020 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH selected
3021 from the group consisting of VHH1, VHH2, VHH3, VHH4, VHH5, VHH6, VHH8,
3022 VHH9 and VHH10 as shown in the Table of CDRs and
3023 - wherein said VHH antibody domain or fragment thereof defined in (d) comprises the
3024 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH selected
3025 from the group consisting of VHH12, VHH13, VHH14, VHH15, VHH16, VHH17,
3026 VHH18, VHH20, VHH21 and VHH22 as shown in the Table of CDRs, wherein said
3027 VHH antibody domain or fragment thereof defined in (d) is selected as follows:
3028 if the VHH antibody domain of (a) or the fragment thereof comprises the
3029 complementarity determining regions CDR1, CDR2 and CDR3 of VHH1, then
3030 the VHH antibody domain of (d) or the fragment thereof comprises the
3031 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH
3032 selected from the group consisting of VHH14, VHH16 and VHH18 as shown in
3033 the Table of CDRs;
3034 if the VHH antibody domain of (a) or the fragment thereof comprises the
3035 complementarity determining regions CDR1, CDR2 and CDR3 of VHH2, then
3036 the VHH antibody domain of (d) or the fragment thereof comprises the
3037 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH
3038 selected from the group consisting of VHH14 and VHH16 as shown in the Table
3039 of CDRs;
3040 if the VHH antibody domain of (a) or the fragment thereof comprises the
3041 complementarity determining regions CDR1, CDR2 and CDR3 of VHH3, then
3042 the VHH antibody domain of (d) or the fragment thereof comprises the
3043 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH
3044 selected from the group consisting of VHH12, VHH13, VHH14, VHH15,
3045 VHH16, VHH17, VHH18, VHH20, VHH21 and VHH22 as shown in the Table
3046 of CDRs; 3047 if the VHH antibody domain of (a) or the fragment thereof comprises the
3048 complementarity determining regions CDR1, CDR2 and CDR3 of VHH4, then
3049 the VHH antibody domain of (d) or the fragment thereof comprises the
3050 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH
3051 selected from the group consisting of VHH12, VHH13, VHH14, VHH15,
3052 VHH16, VHH17, VHH18, VHH20, VHH21 and VHH22 as shown in the Table
3053 of CDRs;
3054 if the VHH antibody domain of (a) or the fragment thereof comprises the
3055 complementarity determining regions CDR1, CDR2 and CDR3 of VHH5, then
3056 the VHH antibody domain of (d) or the fragment thereof comprises the
3057 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH
3058 selected from the group consisting of of VHH12, VHH15, VHH16, VHH17,
3059 VHH18, VHH20, VHH21 and VHH22 as shown in the Table of CDRs;
3060 if the VHH antibody domain of (a) or the fragment thereof comprises the
3061 complementarity determining regions CDR1, CDR2 and CDR3 of VHH6, then
3062 the VHH antibody domain of (d) or the fragment thereof comprises the
3063 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH
3064 selected from the group consisting of VHH14, VHH16 and VHH18 as shown in
3065 the Table of CDRs;
3066 if the VHH antibody domain of (a) or the fragment thereof comprises the
3067 complementarity determining regions CDR1, CDR2 and CDR3 of VHH8, then
3068 the VHH antibody domain of (d) or the fragment thereof comprises the
3069 complementarity determining regions CDR1, CDR2 and CDR3 of VHH16 as
3070 shown in the Table of CDRs;
3071 if the VHH antibody domain of (a) or the fragment thereof comprises the
3072 complementarity determining regions CDR1, CDR2 and CDR3 of VHH9, then
3073 the VHH antibody domain of (d) or the fragment thereof comprises the
3074 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH
3075 selected from the group consisting of VHH14, VHH16 and VHH18 as shown in
3076 the Table of CDRs;
3077 if the VHH antibody domain of (a) or the fragment thereof comprises the
3078 complementarity determining regions CDR1, CDR2 and CDR3 of VHH10, then
3079 the VHH antibody domain of (d) or the fragment thereof comprises the
3080 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH 3081 selected from the group consisting of VHH14, VHH15, VHH16 and VHH18 as
3082 shown in the Table of CDRs.
3083
3084 Thus, according to this embodiment, the compound of embodiment 377 (and the embodiments
3085 referring thereto) can comprise any of the combinations VHHa and VHHP shown in Fig. 4B in
3086 red.
3087
3088 Embodiment 382: The compound according to embodiment 377,
3089 - wherein said VHH antibody domain or fragment thereof defined in (a) comprises the
3090 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH selected
3091 from the group consisting of VHH6 and VHH11 as shown in the Table of CDRs and
3092 - wherein said VHH antibody domain or fragment thereof defined in (d) comprises the
3093 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH selected
3094 from the group consisting of VHH12, VHH13, VHH14, VHH15, VHH16, VHH17,
3095 VHH18, VHH20, VHH21 and VHH22 as shown in the Table of CDRs, wherein said
3096 VHH antibody domain or fragment thereof defined in (d) is selected as follows:
3097 if the VHH antibody domain of (a) or the fragment thereof comprises the
3098 complementarity determining regions CDR1, CDR2 and CDR3 of VHH6, then
3099 the VHH antibody domain of (d) or the fragment thereof comprises the
3100 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH
3101 selected from the group consisting of VHH12 and VHH13 as shown in the Table
3102 of CDRs;
3103 if the VHH antibody domain of (a) or the fragment thereof comprises the
3104 complementarity determining regions CDR1, CDR2 and CDR3 of VHH11, then
3105 the VHH antibody domain of (d) or the fragment thereof comprises the
3106 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH
3107 selected from the group consisting of VHH12, VHH13, VHH14, VHH15,
3108 VHH16, VHH17, VHH18, VHH20, VHH21 and VHH22 as shown in the Table
3109 of CDRs.
3110
3111 Thus, according to this embodiment, the compound of embodiment 377 (and the embodiments
3112 referring thereto) can comprise any of the combinations VHHa and VHHP shown in Fig. 4B in
3113 black. 3115 Embodiment 383: The compound according to embodiment 377,
3116 - wherein said VHH antibody domain or fragment thereof defined in (a) comprises the
3117 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH selected
3118 from the group consisting of VHH2, VHH6, VHH8 and VHH10 as shown in the Table
3119 of CDRs and
3120 - wherein said VHH antibody domain or fragment thereof defined in (d) comprises the
3121 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH selected
3122 from the group consisting of VHH 12, VHH 14, VHH 15, VHH 17 and VHH22 as shown
3123 in the Table of CDRs, wherein said VHH antibody domain or fragment thereof defined
3124 in (d) is selected as follows:
3125 if the VHH antibody domain of (a) or the fragment thereof comprises the
3126 complementarity determining regions CDR1, CDR2 and CDR3 of VHH2, then
3127 the VHH antibody domain of (d) or the fragment thereof comprises the
3128 complementarity determining regions CDR1, CDR2 and CDR3 of VHH22 as
3129 shown in the Table of CDRs;
3130 if the VHH antibody domain of (a) or the fragment thereof comprises the
3131 complementarity determining regions CDR1, CDR2 and CDR3 of VHH6, then
3132 the VHH antibody domain of (d) or the fragment thereof comprises the
3133 complementarity determining regions CDR1, CDR2 and CDR3 of VHH15 as
3134 shown in the Table of CDRs;
3135 if the VHH antibody domain of (a) or the fragment thereof comprises the
3136 complementarity determining regions CDR1, CDR2 and CDR3 of VHH8, then
3137 the VHH antibody domain of (d) or the fragment thereof comprises the
3138 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH
3139 selected from the group consisting of VHH14, VHH15 and VHH22 as shown in
3140 the Table of CDRs;
3141 if the VHH antibody domain of (a) or the fragment thereof comprises the
3142 complementarity determining regions CDR1, CDR2 and CDR3 of VHH10, then
3143 the VHH antibody domain of (d) or the fragment thereof comprises the
3144 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH
3145 selected from the group consisting of VHH12, VHH17 and VHH22 as shown in
3146 the Table of CDRs.
3147 3148 Thus, according to this embodiment, the compound of embodiment 377 (and the embodiments
3149 referring thereto) can comprise any of the combinations VHHa and VHHP shown in Fig. 4B in
3150 orange (active surrogate agonists eliciting less than 50% of NFKB reporter activation
3151 normalized to (rh) IL-18 at 1 nM or EC50 higher than 0.1 nM).
3152
3153 Embodiment 384: The compound according to embodiment 377, wherein said VHH antibody
3154 domain or fragment thereof defined in (a) comprises the complementarity determining regions
3155 CDR1, CDR2 and CDR3 of one VHH selected from the group consisting of VHH2 and VHH8
3156 as shown in the Table of CDRs and wherein said VHH antibody domain or fragment thereof
3157 defined in (d) comprises the complementarity determining regions CDR1, CDR2 and CDR3 of
3158 one VHH selected from the group consisting of VHH15 and VHH17 as shown in the Table of
3159 CDRs.
3160
3161 Embodiment 385: The compound according to embodiment 377,
3162 - wherein said VHH antibody domain or fragment thereof defined in (a) comprises the
3163 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH selected
3164 from the group consisting of VHH2 and VHH8 as shown in the Table of CDRs and
3165 - wherein said VHH antibody domain or fragment thereof defined in (d) comprises the
3166 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH selected
3167 from the group consisting of VHH15 and VHH17 as shown in the Table of CDRs,
3168 wherein said VHH antibody domain or fragment thereof defined in (d) is selected as
3169 follows:
3170 if the VHH antibody domain of (a) or the fragment thereof comprises the
3171 complementarity determining regions CDR1, CDR2 and CDR3 of VHH2, then
3172 the VHH antibody domain of (d) or the fragment thereof comprises the
3173 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH
3174 selected from the group consisting of VHH15 and VHH17 as shown in the Table
3175 of CDRs;
3176 if the VHH antibody domain of (a) or the fragment thereof comprises the
3177 complementarity determining regions CDR1, CDR2 and CDR3 of VHH8, then
3178 the VHH antibody domain of (d) or the fragment thereof comprises the
3179 complementarity determining regions CDR1, CDR2 and CDR3 of VHH17 as
3180 shown in the Table of CDRs.
3181 3182 Embodiment 386: The compound according to embodiment 377, wherein said VHH antibody
3183 domain or fragment thereof defined in (a) comprises the complementarity determining regions
3184 CDR1, CDR2 and CDR3 of VHH2 as shown in the Table of CDRs and wherein said VHH
3185 antibody domain or fragment thereof defined in (d) comprises the complementarity determining
3186 regions CDR1, CDR2 and CDR3 of VHH15 as shown in the Table of CDRs.
3187
3188 Embodiment 387: The compound according to embodiment 377,
3189 - wherein said VHH antibody domain or fragment thereof defined in (a) comprises the
3190 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH selected
3191 from the group consisting of VHH1, VHH2, VHH5, VHH6, VHH8 and VHH 10 as
3192 shown in the Table of CDRs and
3193 - wherein said VHH antibody domain or fragment thereof defined in (d) comprises the
3194 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH selected
3195 from the group consisting of VHH13, VHH16 and VHH22 as shown in the Table of
3196 CDRs, wherein said VHH antibody domain or fragment thereof defined in (d) is selected
3197 as follows:
3198 if the VHH antibody domain of (a) or the fragment thereof comprises the
3199 complementarity determining regions CDR1, CDR2 and CDR3 of VHH1, then
3200 the VHH antibody domain of (d) or the fragment thereof comprises the
3201 complementarity determining regions CDR1, CDR2 and CDR3 of VHH16 as
3202 shown in the Table of CDRs;
3203 if the VHH antibody domain of (a) or the fragment thereof comprises the
3204 complementarity determining regions CDR1, CDR2 and CDR3 of VHH2, then
3205 the VHH antibody domain of (d) or the fragment thereof comprises the
3206 complementarity determining regions CDR1, CDR2 and CDR3 of VHH22 as
3207 shown in the Table of CDRs;
3208 if the VHH antibody domain of (a) or the fragment thereof comprises the
3209 complementarity determining regions CDR1, CDR2 and CDR3 of VHH5, then
3210 the VHH antibody domain of (d) or the fragment thereof comprises the
3211 complementarity determining regions CDR1, CDR2 and CDR3 of VHH13 as
3212 shown in the Table of CDRs;
3213 if the VHH antibody domain of (a) or the fragment thereof comprises the
3214 complementarity determining regions CDR1, CDR2 and CDR3 of VHH6, then
3215 the VHH antibody domain of (d) or the fragment thereof comprises the 3216 complementarity determining regions CDR1, CDR2 and CDR3 of VHH22 as
3217 shown in the Table of CDRs;
3218 if the VHH antibody domain of (a) or the fragment thereof comprises the
3219 complementarity determining regions CDR1, CDR2 and CDR3 of VHH8, then
3220 the VHH antibody domain of (d) or the fragment thereof comprises the
3221 complementarity determining regions CDR1, CDR2 and CDR3 of VHH22 as
3222 shown in the Table of CDRs;
3223 if the VHH antibody domain of (a) or the fragment thereof comprises the
3224 complementarity determining regions CDR1, CDR2 and CDR3 of VHH10, then
3225 the VHH antibody domain of (d) or the fragment thereof comprises the
3226 complementarity determining regions CDR1, CDR2 and CDR3 of VHH22 as
3227 shown in the Table of CDRs.
3228
3229 Embodiment 388: The compound according to embodiment 377,
3230 - wherein said VHH antibody domain or fragment thereof defined in (a) comprises the
3231 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH selected
3232 from the group consisting of VHH2, VHH6, VHH8 and VHH10 as shown in the Table
3233 of CDRs and
3234 - wherein said VHH antibody domain or fragment thereof defined in (d) comprises the
3235 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH selected
3236 from the group consisting of VHH12 and VHH15 as shown in the Table of CDRs, wherein
3237 said VHH antibody domain or fragment thereof defined in (d) is selected as follows:
3238 if the VHH antibody domain of (a) or the fragment thereof comprises the
3239 complementarity determining regions CDR1, CDR2 and CDR3 of VHH2, then the
3240 VHH antibody domain of (d) or the fragment thereof comprises the
3241 complementarity determining regions CDR1, CDR2 and CDR3 of VHH12 as
3242 shown in the Table of CDRs;
3243 if the VHH antibody domain of (a) or the fragment thereof comprises the
3244 complementarity determining regions CDR1, CDR2 and CDR3 of VHH6, then the
3245 VHH antibody domain of (d) or the fragment thereof comprises the
3246 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH
3247 selected from the group consisting of VHH12 and VHH15 as shown in the Table of
3248 CDRs; 3249 if the VHH antibody domain of (a) or the fragment thereof comprises the
3250 complementarity determining regions CDR1, CDR2 and CDR3 of VHH8, then the
3251 VHH antibody domain of (d) or the fragment thereof comprises the
3252 complementarity determining regions CDR1, CDR2 and CDR3 of one VHH
3253 selected from the group consisting of VHH13 and VHH18 as shown in the Table of
3254 CDRs;
3255 if the VHH antibody domain of (a) or the fragment thereof comprises the
3256 complementarity determining regions CDR1, CDR2 and CDR3 of VHH10, then
3257 the VHH antibody domain of (d) or the fragment thereof comprises the
3258 complementarity determining regions CDR1, CDR2 and CDR3 of VHH12 as
3259 shown in the Table of CDRs.
3260
3261 Embodiment 389: The compound according to any one of embodiments 377 or 380 to 388,
3262 wherein in the first binding module said VHH antibody domain or fragment thereof comprises
3263 complementarity determining regions according to (a) or (b).
3264
3265 If the present disclosure states that "in the first binding module said VHH antibody domain or
3266 fragment thereof comprises complementarity determining regions according to (a) or (b)", then
3267 this is meant to designate that in this embodiment only (a) and (b) are considered as options for
3268 the VHH antibody domain (or fragment thereof) of the first binding module, whereas option (c)
3269 is excluded. If the present disclosure states that "in the first binding module said VHH antibody
3270 domain or fragment thereof comprises complementarity determining regions according to (a)
3271 or (c)", then this is meant to designate that in this embodiment only (a) and (c) are considered
3272 as options for the VHH antibody domain (or fragment thereof) of the first binding module,
3273 whereas option (b) is excluded. The alternative wording below is to be understood accordingly.
3274 If the present disclosure states that "in the first binding module said VHH antibody domain or
3275 fragment thereof comprises complementarity determining regions according to (a)", then this
3276 is meant to designate that in this embodiment only (a) is considered as option for the VHH
3277 antibody domain (or fragment thereof) of the first binding module, whereas options (b) and (c)
3278 are excluded. Further variations of this wording below are to be understood accordingly.
3279
3280 Embodiment 390: The compound according to any one of embodiments 377 or 380 to 388,
3281 wherein in the first binding module said VHH antibody domain or fragment thereof comprises
3282 complementarity determining regions according to (a) or (c). 3283
3284 Embodiment 391 : The compound according to any one of embodiments 377 or 380 to 388,
3285 wherein in the first binding module said VHH antibody domain or fragment thereof comprises
3286 complementarity determining regions according to (a).
3287
3288 Embodiment 392: The compound according to any one of embodiments 377 or 380 to 388,
3289 wherein in the first binding module said VHH antibody domain or fragment thereof comprises
3290 complementarity determining regions according to (b).
3291
3292 Embodiment 393: The compound according to any one of embodiments 377 or 380 to 392,
3293 wherein in the second binding module said VHH antibody domain or fragment thereof
3294 comprises complementarity determining regions according to (d) or (e).
3295
3296 Embodiment 394: The compound according to any one of embodiments 377 or 380 to 392,
3297 wherein in the second binding module said VHH antibody domain or fragment thereof
3298 comprises complementarity determining regions according to (d) or (f).
3299
3300 Embodiment 395: The compound according to any one of embodiments 377 or 380 to 392,
3301 wherein in the second binding module said VHH antibody domain or fragment thereof
3302 comprises complementarity determining regions according to (d).
3303
3304 Embodiment 396: The compound according to any one of embodiments 377 or 380 to 392,
3305 wherein in the second binding module said VHH antibody domain or fragment thereof
3306 comprises complementarity determining regions according to (e).
3307
3308 Embodiment 397: The compound according to any one of embodiments 378 or 379,
3309 - wherein said VHH antibody domain of (A) comprises the amino acid sequence of one
3310 VHH selected from the group consisting of VHH1, VHH2, VHH5, VHH6, VHH8,
3311 VHH9 and VHH10 shown in the Table of VHH Sequences and
3312 - wherein said VHH antibody domain of (E) comprises the amino acid sequence of one
3313 VHH selected from the group consisting of VHH12, VHH13, VHH14, VHH15,
3314 VHH17, VHH18, VHH20, VHH21 and VHH22 shown in the Table of VHH Sequences,
3315 wherein said VHH antibody domain of (E) is selected as follows: 3316 if the VHH antibody domain of (A) comprises the amino acid sequence of VHH1,
3317 then the VHH antibody domain of (E) comprises the amino acid sequence of one
3318 VHH selected from the group consisting of VHH12, VHH13, VHH15, VHH17,
3319 VHH20, VHH21 and VHH22 shown in the Table of VHH Sequences;
3320 if the VHH antibody domain of (A) comprises the amino acid sequence of VHH2,
3321 then the VHH antibody domain of (E) comprises the amino acid sequence of one
3322 VHH selected from the group consisting of VHH12, VHH13, VHH15, VHH17,
3323 VHH18, VHH20, VHH21 and VHH22 shown in the Table of VHH Sequences;
3324 if the VHH antibody domain of (A) comprises the amino acid sequence of VHH5,
3325 then the VHH antibody domain of (E) comprises the amino acid sequence of one
3326 VHH selected from the group consisting of VHH13 and VHH14 shown in the
3327 Table of VHH Sequences;
3328 if the VHH antibody domain of (A) comprises the amino acid sequence of VHH6,
3329 then the VHH antibody domain of (E) comprises the amino acid sequence of one
3330 VHH selected from the group consisting of VHH17, VHH20, VHH21 and VHH22
3331 shown in the Table of VHH Sequences;
3332 if the VHH antibody domain of (A) comprises the amino acid sequence of VHH8,
3333 then the VHH antibody domain of (E) comprises the amino acid sequence of one
3334 VHH selected from the group consisting of VHH12, VHH13, VHH17, VHH18,
3335 VHH20 and VHH21 shown in the Table of VHH Sequences;
3336 if the VHH antibody domain of (A) comprises the amino acid sequence of VHH9,
3337 then the VHH antibody domain of (E) comprises the amino acid sequence of one
3338 VHH selected from the group consisting of VHH12, VHH13, VHH15, VHH17,
3339 VHH18, VHH20, VHH21 and VHH22 shown in the Table of VHH Sequences;
3340 if the VHH antibody domain of (A) comprises the amino acid sequence of VHH10,
3341 then the VHH antibody domain of (E) comprises the amino acid sequence of one
3342 VHH selected from the group consisting of VHH13, VHH20 and VHH21 shown
3343 in the Table of VHH Sequences.
3344
3345 Thus, according to this embodiment, the compound of embodiments 378 to 379 (and the
3346 embodiments referring thereto) can comprise any of the combinations VHHa and VHHP shown
3347 in Fig. 4B in green (surrogate agonists triggering either a normalized NFKB reporter activation
3348 of more than 50% relative to IL18 or displaying potencies of less than 0.1 nM).
3349 3350 Embodiment 398: The compound according to any one of embodiments 378 or 379,
3351 - wherein said VHH antibody domain of (A) comprises the amino acid sequence of one
3352 VHH selected from the group consisting of VHH1, VHH2, VHH3, VHH4, VHH5,
3353 VHH6, VHH8, VHH9 and VHH10 shown in the Table of VHH Sequences and
3354 - wherein said VHH antibody domain of (E) comprises the amino acid sequence of one
3355 VHH selected from the group consisting of VHH12, VHH13, VHH14, VHH15,
3356 VHH16, VHH17, VHH18, VHH20, VHH21 and VHH22 shown in the Table of VHH
3357 Sequences, wherein said VHH antibody domain of (E) is selected as follows:
3358 if the VHH antibody domain of (A) comprises the amino acid sequence of VHH1,
3359 then the VHH antibody domain of (E) comprises the amino acid sequence of one
3360 VHH selected from the group consisting of VHH14, VHH16 and VHH18 shown
3361 in the Table of VHH Sequences;
3362 if the VHH antibody domain of (A) comprises the amino acid sequence of VHH2,
3363 then the VHH antibody domain of (E) comprises the amino acid sequence of one
3364 VHH selected from the group consisting of VHH14 and VHH16 shown in the
3365 Table of VHH Sequences;
3366 if the VHH antibody domain of (A) comprises the amino acid sequence of VHH3,
3367 then the VHH antibody domain of (E) comprises the amino acid sequence of one
3368 VHH selected from the group consisting of VHH12, VHH13, VHH14, VHH15,
3369 VHH16, VHH17, VHH18, VHH20, VHH21 and VHH22 shown in the Table of
3370 VHH Sequences;
3371 if the VHH antibody domain of (A) comprises the amino acid sequence of VHH4,
3372 then the VHH antibody domain of (E) comprises the amino acid sequence of one
3373 VHH selected from the group consisting of VHH12, VHH13, VHH14, VHH15,
3374 VHH16, VHH17, VHH18, VHH20, VHH21 and VHH22 shown in the Table of
3375 VHH Sequences;
3376 if the VHH antibody domain of (A) comprises the amino acid sequence of VHH5,
3377 then the VHH antibody domain of (E) comprises the amino acid sequence of one
3378 VHH selected from the group consisting of VHH12, VHH15, VHH16, VHH17,
3379 VHH18, VHH20, VHH21 and VHH22 shown in the Table of VHH Sequences;
3380 if the VHH antibody domain of (A) comprises the amino acid sequence of VHH6,
3381 then the VHH antibody domain of (E) comprises the amino acid sequence of one
3382 VHH selected from the group consisting of VHH14, VHH16 and VHH18 shown
3383 in the Table of VHH Sequences; 3384 if the VHH antibody domain of (A) comprises the amino acid sequence of VHH8,
3385 then the VHH antibody domain of (E) comprises the amino acid sequence of
3386 VHH16 shown in the Table of VHH Sequences;
3387 if the VHH antibody domain of (A) comprises the amino acid sequence of VHH9,
3388 then the VHH antibody domain of (E) comprises the amino acid sequence of one
3389 VHH selected from the group consisting of VHH14, VHH16 and VHH18 shown
3390 in the Table of VHH Sequences;
3391 if the VHH antibody domain of (A) comprises the amino acid sequence of VHH10,
3392 then the VHH antibody domain of (E) comprises the amino acid sequence of one
3393 VHH selected from the group consisting of VHH14, VHH15, VHH16 and VHH18
3394 shown in the Table of VHH Sequences.
3395
3396 Thus, according to this embodiment, the compound of embodiments 378 to 379 (and the
3397 embodiments referring thereto) can comprise any of the combinations VHHa and VHHP shown
3398 in Fig. 4B in red.
3399
3400 Embodiment 399: The compound according to any one of embodiments 378 or 379,
3401 - wherein said VHH antibody domain of (A) comprises the amino acid sequence of one
3402 VHH selected from the group consisting of VHH6 and VHH11 shown in the Table of
3403 VHH Sequences and
3404 - wherein said VHH antibody domain of (E) comprises the amino acid sequence of one
3405 VHH selected from the group consisting of VHH12, VHH13, VHH14, VHH15,
3406 VHH16, VHH17, VHH18, VHH20, VHH21 and VHH22 shown in the Table of VHH
3407 Sequences, wherein said VHH antibody domain of (E) is selected as follows:
3408 if the VHH antibody domain of (A) comprises the amino acid sequence of VHH6,
3409 then the VHH antibody domain of (E) comprises the amino acid sequence of one
3410 VHH selected from the group consisting of VHH12 and VHH13 shown in the
3411 Table of VHH Sequences;
3412 if the VHH antibody domain of (A) comprises the amino acid sequence of VHH11,
3413 then the VHH antibody domain of (E) comprises the amino acid sequence of one
3414 VHH selected from the group consisting of VHH12, VHH13, VHH14, VHH15,
3415 VHH16, VHH17, VHH18, VHH20, VHH21 and VHH22 shown in the Table of
3416 VHH Sequences.
3417 3418 Thus, according to this embodiment, the compound of embodiments 378 to 379 (and the
3419 embodiments referring thereto) can comprise any of the combinations VHHa and VHHP shown
3420 in Fig. 4B in black.
3421
3422 Embodiment 400: The compound according to any one of embodiments 378 or 379,
3423 - wherein said VHH antibody domain of (A) comprises the amino acid sequence of one
3424 VHH selected from the group consisting of VHH2, VHH6, VHH8 and VHH10 shown
3425 in the Table of VHH Sequences and
3426 - wherein said VHH antibody domain of (E) comprises the amino acid sequence of one
3427 VHH selected from the group consisting of VHH 12, VHH14, VHH15, VHH17 and
3428 VHH22 shown in the Table of VHH Sequences, wherein said VHH antibody domain of
3429 (E) is selected as follows:
3430 if the VHH antibody domain of (A) comprises the amino acid sequence of VHH2,
3431 then the VHH antibody domain of (E) comprises the amino acid sequence of
3432 VHH22 shown in the Table of VHH Sequences;
3433 if the VHH antibody domain of (A) comprises the amino acid sequence of VHH6,
3434 then the VHH antibody domain of (E) comprises the amino acid sequence of
3435 VHH15 shown in the Table of VHH Sequences;
3436 if the VHH antibody domain of (A) comprises the amino acid sequence of VHH8,
3437 then the VHH antibody domain of (E) comprises the amino acid sequence of one
3438 VHH selected from the group consisting of VHH14, VHH15 and VHH22 shown
3439 in the Table of VHH Sequences;
3440 if the VHH antibody domain of (A) comprises the amino acid sequence of VHH10,
3441 then the VHH antibody domain of (E) comprises the amino acid sequence of one
3442 VHH selected from the group consisting of VHH12, VHH17 and VHH22 shown
3443 in the Table of VHH Sequences.
3444
3445 Thus, according to this embodiment, the compound of embodiments 378 to 379 (and the
3446 embodiments referring thereto) can comprise any of the combinations VHHa and VHHP shown
3447 in Fig. 4B in orange (active surrogate agonists eliciting less than 50% of NFKB reporter
3448 activation normalized to (rh) IL-18 at 1 nM or EC50 higher than 0.1 nM).
3449
3450 Embodiment 401 : The compound according to any one of embodiments 378 or 379, wherein
3451 said VHH antibody domain of (A) comprises the amino acid sequence of one VHH selected 3452 from the group consisting of VHH2 and VHH8 shown in the Table of VHH Sequences and
3453 wherein said VHH antibody domain of (E) comprises the amino acid sequence of one VHH
3454 selected from the group consisting of VHH15 and VHH17 shown in the Table of VHH
3455 Sequences.
3456
3457 Embodiment 402: The compound according to any one of embodiments 378 or 379,
3458 - wherein said VHH antibody domain of (A) comprises the amino acid sequence of one
3459 VHH selected from the group consisting of VHH2 and VHH8 shown in the Table of
3460 VHH Sequences and
3461 - wherein said VHH antibody domain of (E) comprises the amino acid sequence of one
3462 VHH selected from the group consisting of VHH15 and VHH17 shown in the Table of
3463 VHH Sequences, wherein said VHH antibody domain of (E) is selected as follows:
3464 if the VHH antibody domain of (A) comprises the amino acid sequence of VHH2,
3465 then the VHH antibody domain of (E) comprises the amino acid sequence of one
3466 VHH selected from the group consisting of VHH15 and VHH17 shown in the
3467 Table of VHH Sequences;
3468 if the VHH antibody domain of (A) comprises the amino acid sequence of VHH8,
3469 then the VHH antibody domain of (E) comprises the amino acid sequence of
3470 VHH17 shown in the Table of VHH Sequences.
3471
3472 Embodiment 403: The compound according to any one of embodiments 378 or 379, wherein
3473 said VHH antibody domain of (A) comprises the amino acid sequence of VHH2 shown in the
3474 Table of VHH Sequences and wherein said VHH antibody domain of (E) comprises the amino
3475 acid sequence of VHH15 shown in the Table of VHH Sequences.
3476
3477 Embodiment 404: The compound according to any one of embodiments 378 or 379,
3478 - wherein said VHH antibody domain of (A) comprises the amino acid sequence of one
3479 VHH selected from the group consisting of VHH1, VHH2, VHH5, VHH6, VHH8 and
3480 VHH10 shown in the Table of VHH Sequences and
3481 - wherein said VHH antibody domain of (E) comprises the amino acid sequence of one
3482 VHH selected from the group consisting of VHH13, VHH16 and VHH22 shown in the
3483 Table of VHH Sequences, wherein said VHH antibody domain of (E) is selected as
3484 follows: 3485 if the VHH antibody domain of (A) comprises the amino acid sequence of VHH1,
3486 then the VHH antibody domain of (E) comprises the amino acid sequence of
3487 VHH16 shown in the Table of VHH Sequences;
3488 if the VHH antibody domain of (A) comprises the amino acid sequence of VHH2,
3489 then the VHH antibody domain of (E) comprises the amino acid sequence of
3490 VHH22 shown in the Table of VHH Sequences;
3491 if the VHH antibody domain of (A) comprises the amino acid sequence of VHH5,
3492 then the VHH antibody domain of (E) comprises the amino acid sequence of
3493 VHH13 shown in the Table of VHH Sequences;
3494 if the VHH antibody domain of (A) comprises the amino acid sequence of VHH6,
3495 then the VHH antibody domain of (E) comprises the amino acid sequence of
3496 VHH22 shown in the Table of VHH Sequences;
3497 if the VHH antibody domain of (A) comprises the amino acid sequence of VHH8,
3498 then the VHH antibody domain of (E) comprises the amino acid sequence of
3499 VHH22 shown in the Table of VHH Sequences;
3500 if the VHH antibody domain of (A) comprises the amino acid sequence of VHH10,
3501 then the VHH antibody domain of (E) comprises the amino acid sequence of
3502 VHH22 shown in the Table of VHH Sequences.
3503
3504 Embodiment 405: The compound according to any one of embodiments 378 or 379,
3505 - wherein said VHH antibody domain of (A) comprises the amino acid sequence of one
3506 VHH selected from the group consisting of VHH2, VHH6, VHH8 and VHH10 shown
3507 in the Table of VHH Sequences and
3508 - wherein said VHH antibody domain of (E) comprises the amino acid sequence of one
3509 VHH selected from the group consisting of VHH12, VHH13, VHH15 and VHH18
3510 shown in the Table of VHH Sequences, wherein said VHH antibody domain of (E) is
3511 selected as follows:
3512 if the VHH antibody domain of (A) comprises the amino acid sequence of VHH2,
3513 then the VHH antibody domain of (E) comprises the amino acid sequence of
3514 VHH12 shown in the Table of VHH Sequences;
3515 if the VHH antibody domain of (A) comprises the amino acid sequence of VHH6,
3516 then the VHH antibody domain of (E) comprises the amino acid sequence of one
3517 VHH selected from the group consisting of VHH15 and VHH12 shown in the
3518 Table of VHH Sequences; 3519 if the VHH antibody domain of (A) comprises the amino acid sequence of VHH8,
3520 then the VHH antibody domain of (E) comprises the amino acid sequence of one
3521 VHH selected from the group consisting of VHH13 and VHH18 shown in the
3522 Table of VHH Sequences;
3523 if the VHH antibody domain of (A) comprises the amino acid sequence of VHH10,
3524 then the VHH antibody domain of (E) comprises the amino acid sequence of
3525 VHH12 shown in the Table of VHH Sequences.
3526
3527 Embodiment 406: The compound according to any one of embodiments 378 to 379 or 397 to
3528 405, wherein in the first binding module said VHH antibody domain or fragment thereof
3529 comprises a VHH antibody domain or fragment thereof according to (A), (B) or (C).
3530
3531 If the present disclosure states that " in the first binding module said VHH antibody domain or
3532 fragment thereof comprises a VHH antibody domain or fragment thereof according to (A), (B)
3533 or (C)", then this is meant to designate that in this embodiment only (A), (B) and (C) are
3534 considered as options for the VHH antibody domain (or fragment thereof) of the first binding
3535 module, whereas the option (D) is excluded. If the present disclosure states that " in the first
3536 binding module said VHH antibody domain or fragment thereof comprises a VHH antibody
3537 domain or fragment thereof according to (A), (C) or (D)", then this is meant to designate that
3538 in this embodiment only (A), (C) and (D) are considered as options for the VHH antibody
3539 domain (or fragment thereof) of the first binding module, whereas the option (B) is excluded.
3540 If the present disclosure states that " in the first binding module said VHH antibody domain or
3541 fragment thereof comprises a VHH antibody domain or fragment thereof according to (A)",
3542 then this is meant to designate that in this embodiment only (A) is considered as option for the
3543 VHH antibody domain (or fragment thereof) of the first binding module, whereas the options
3544 (B), (C) and (D) are excluded. Further variations of this wording below are to be understood
3545 accordingly.
3546
3547 Embodiment 407: The compound according to any one of embodiments 378 to 379 or 397 to
3548 405, wherein in the first binding module said VHH antibody domain or fragment thereof
3549 comprises a VHH antibody domain or fragment thereof according to (A), (B) or (D).
3550 3551 Embodiment 408: The compound according to any one of embodiments 378 to 379 or 397 to
3552 405, wherein in the first binding module said VHH antibody domain or fragment thereof
3553 comprises a VHH antibody domain or fragment thereof according to (A), (C) or (D).
3554
3555 Embodiment 409: The compound according to any one of embodiments 378 to 379 or 397 to
3556 405, wherein in the first binding module said VHH antibody domain or fragment thereof
3557 comprises a VHH antibody domain or fragment thereof according to (A) or (B).
3558
3559 Embodiment 410: The compound according to any one of embodiments 378 to 379 or 397 to
3560 405, wherein in the first binding module said VHH antibody domain or fragment thereof
3561 comprises a VHH antibody domain or fragment thereof according to (A) or (C).
3562
3563 Embodiment 411 : The compound according to any one of embodiments 378 to 379 or 397 to
3564 405, wherein in the first binding module said VHH antibody domain or fragment thereof
3565 comprises a VHH antibody domain or fragment thereof according to (A) or (D).
3566
3567 Embodiment 412: The compound according to any one of embodiments 378 to 379 or 397 to
3568 405, wherein in the first binding module said VHH antibody domain or fragment thereof
3569 comprises a VHH antibody domain or fragment thereof according to (A).
3570
3571 Embodiment 413: The compound according to any one of embodiments 378 to 379 or 397 to
3572 405, wherein in the first binding module said VHH antibody domain or fragment thereof
3573 comprises a VHH antibody domain or fragment thereof according to (B).
3574
3575 Embodiment 414: The compound according to any one of embodiments 378 to 379 or 397 to
3576 413, wherein in the second binding module said VHH antibody domain or fragment thereof
3577 comprises a VHH antibody domain or fragment thereof according to (E), (F) or (G).
3578
3579 Embodiment 415: The compound according to any one of embodiments 378 to 379 or 397 to
3580 413, wherein in the second binding module said VHH antibody domain or fragment thereof
3581 comprises a VHH antibody domain or fragment thereof according to (E), (F) or (H).
3582 3583 Embodiment 416: The compound according to any one of embodiments 378 to 379 or 397 to
3584 413, wherein in the second binding module said VHH antibody domain or fragment thereof
3585 comprises a VHH antibody domain or fragment thereof according to (E), (G) or (H).
3586
3587 Embodiment 417: The compound according to any one of embodiments 378 to 379 or 397 to
3588 413, wherein in the second binding module said VHH antibody domain or fragment thereof
3589 comprises a VHH antibody domain or fragment thereof according to (E) or (F).
3590
3591 Embodiment 418: The compound according to any one of embodiments 378 to 379 or 397 to
3592 413, wherein in the second binding module said VHH antibody domain or fragment thereof
3593 comprises a VHH antibody domain or fragment thereof according to (E) or (G).
3594
3595 Embodiment 419: The compound according to any one of embodiments 378 to 379 or 397 to
3596 413, wherein in the second binding module said VHH antibody domain or fragment thereof
3597 comprises a VHH antibody domain or fragment thereof according to (E) or (H).
3598
3599 Embodiment 420: The compound according to any one of embodiments 378 to 379 or 397 to
3600 413, wherein in the second binding module said VHH antibody domain or fragment thereof
3601 comprises a VHH antibody domain or fragment thereof according to (E).
3602
3603 Embodiment 421 : The compound according to any one of embodiments 378 to 379 or 397 to
3604 413, wherein in the second binding module said VHH antibody domain or fragment thereof
3605 comprises a VHH antibody domain or fragment thereof according to (F).
3606
3607 Embodiment 422: The compound according to any one of embodiments 375 to 421, wherein
3608 said compound is a molecule.
3609
3610 Embodiment 423: The compound according to any one of embodiments 375 to 422, wherein
3611 said compound comprises or is a protein.
3612
3613 By stating that the compound "comprises" a protein, the present disclosure designates that the
3614 compound includes a part within its chemical structure that is a protein. A compound that
3615 comprises a protein may or may not comprise a part that is not a protein.
3616 3617 Embodiment 424: The compound according to any one of embodiments 375 to 422, wherein
3618 said compound is a protein.
3619
3620 By stating that the compound "is" a protein, the present disclosure designates that the compound
3621 consists only of protein and does not comprise a part that is not a protein.
3622
3623 Embodiment 425: The compound according to any one of embodiments 375 to 424, wherein
3624 said compound further comprises a targeting moiety.
3625
3626 As used herein, the term "targeting moiety" refers to a moiety (i.e. a molecular group or
3627 chemical structure) that is (typically covalently) associated with said compound and that binds
3628 a target site, wherein said binding allows to recruit the compound to said target site (e.g. a
3629 moiety that specifically binds to EGFR and thus targets the compound to cells expressing EGFR
3630 at their cell surface). The target site will typically be a biological molecule or a certain part of
3631 a biological molecule. An example of a targeting moiety is an antigen-binding antibody
3632 fragment that is covalently linked to an IL-18Ra-binding and/or IL-18RP-binding VHH
3633 antibody domain to form a compound according to the present disclosure, wherein the antigen¬
3634 binding fragment binds to a certain receptor present at the surface of a certain cell type (its
3635 antigen), and wherein binding of the antigen-binding fragment to this receptor results in
3636 recruitment of the compound to this cell.
3637
3638 Non-targeted drugs typically reach their site of action by whole-body distribution and passive
3639 diffusion. In contrast, targeted compounds are not distributed evenly across the whole body.
3640 Due to the interaction of targeting moiety with its target molecule, a compound including a
3641 targeting moiety is concentrated preferentially at its site target site. Therefore, e.g. therapeutic
3642 compounds with a targeting moiety require lower dosages to be therapeutically effective, thus
3643 improving the therapeutic window.
3644
3645 Embodiment 426: The compound according to embodiment 425, wherein said targeting moiety
3646 is a protein, a peptide, a peptide mimetic, a nucleic acid, an oligonucleotide or a small molecule.
3647
3648 As used herein, the term "peptide mimetic" refers to a peptide-like chain which is designed to
3649 mimic a peptide. An example of a peptide mimetic is a D-peptide mimetic containing a D- 3650 amino acid, but is not limited thereto. As used herein, a "small molecule", is a molecule with a
3651 molecular weight < 1000 Da.
3652
3653 Embodiment 427: The compound according to any one of embodiments 375 to 426, wherein
3654 said compound is a monospecific molecule.
3655
3656 Embodiment 428: The compound according to any one of embodiments 375 to 426, wherein
3657 said compound is a bispecific molecule.
3658
3659 Embodiment 429: The compound according to any one of embodiments 375 to 426 or 428,
3660 wherein said compound is a bispecific antibody molecule.
3661
3662 The term "bispecific antibody molecule", as used in the present disclosure, refers to an antibody
3663 molecule that is capable of specifically binding to two different epitopes at the same time. This
3664 does not exclude the possibility that said bispecific antibody molecule is linked to further
3665 domains or moieties.
3666
3667 The terms "epitope" or "antigenic determinant" are used interchangeably herein and refer to the
3668 portion of an antigen that is recognized and specifically bound by a particular antibody. When
3669 the antigen is a polypeptide, epitopes can be formed both from contiguous amino acids and
3670 noncontiguous amino acids juxtaposed by tertiary folding of a protein. Epitopes formed from
3671 contiguous amino acids are typically retained upon protein denaturing, whereas epitopes
3672 formed by tertiary folding are typically lost upon protein denaturing. An epitope typically
3673 includes at least 3, and more usually, at least 5 or 8-10 amino acids in a unique spatial
3674 conformation.
3675
3676 Typically, in the compounds of the present disclosure, one of the two epitopes to which the
3677 compound of the present disclosure binds is an epitope on IL-18Ra whereas the other of the
3678 two epitopes to which the compound of the present disclosure binds is an epitope on IL-18Rp.
3679
3680 Methods for making bispecific antibodies are known in the art. For example, bispecific
3681 antibodies can be produced recombinantly using the co-expression of two immunoglobulin
3682 heavy chain/light chain pairs (see e.g. Milstein et al., Nature (1983), vol. 305, p. 537-539).
3683 Alternatively, bispecific antibodies can be prepared using chemical linkage (see e.g. Brennan 3684 et al., Science (1985), vol. 229, p. 81). A bispecific antibody can also for example be prepared
3685 by the SEED technology (see below).
3686
3687 Embodiment 430: The compound according to any one of embodiments 375 to 426 or 428 to
3688 429, wherein one binding site of said bispecific antibody molecule is formed by a VHH
3689 antibody domain or fragment thereof according to the present disclosure that is specific for IL-
3690 18Ra, and one binding site of said bispecific antibody is formed by a VHH antibody domain or
3691 fragment thereof according to the present disclosure that is specific for IL-18Rp.
3692
3693 Embodiment 431: The compound according to any one of embodiments 375 to 426 or 428 to
3694 429, wherein one binding site of said bispecific antibody molecule is a VHH antibody domain
3695 or fragment thereof according to the present disclosure and the other binding site of said
3696 bispecific antibody molecule is selected from the group consisting of a Fab, a Fab', a (Fab')2, a
3697 Fv, a scFv, a diabody and a VHH.
3698
3699 "Fab" fragments are obtained by papain digestion of an antibody, which produces two identical
3700 antigen-binding fragments, called "Fab" fragments, and a residual "Fc" fragment, a designation
3701 reflecting the ability to crystallize readily. The Fab fragment consists of an entire L chain along
3702 with the variable region domain of the H chain (VH), and the first constant domain of one heavy
3703 chain (CHI). Each Fab fragment is monovalent with respect to antigen binding, i.e., it has a
3704 single antigen-binding site.
3705
3706 "F(ab')2" fragments are obtained by pepsin treatment of an antibody, which yields a single large
3707 F(ab')2 fragment which roughly corresponds to two disulfide linked Fab fragments having
3708 different antigen-binding activity and is still capable of cross-linking antigen.
3709
3710 "Fab1 " fragments differ from Fab fragments by having a few additional residues at the carboxy
3711 terminus of the CHI domain including one or more cysteines from the antibody hinge region.
3712 Fab'-SH is the designation for Fab' in which the cysteine residue(s) of the constant domains
3713 bear a free thiol group. F(ab')2 antibody fragments originally were produced as pairs of Fab'
3714 fragments which have hinge cysteines between them. Other chemical couplings of antibody
3715 fragments are also known.
3716 3717 The Fc fragment comprises the carboxy-terminal portions of both H chains held together by
3718 disulfides. The effector functions of antibodies are determined by sequences in the Fc region,
3719 the region which is also recognized by Fc receptors (FcR) found on certain types of cells.
3720
3721 "Fv" is the minimum antibody fragment which contains a complete antigen-recognition and -
3722 binding site. This fragment consists of a dimer of one heavy- and one light-chain variable region
3723 domain in tight, non-covalent association. From the folding of these two domains emanate six
3724 hypervariable loops (3 loops each from the H and L chain) that contribute the amino acid
3725 residues for antigen binding and confer antigen binding specificity to the antibody. However,
3726 even a single variable domain (or half of an Fv comprising only three HVRs specific for an
3727 antigen) has the ability to recognize and bind antigen, although at a lower affinity than the entire
3728 binding site.
3729
3730 "Single-chain Fv", also abbreviated as "scFv", are antibody fragments that comprise the VH
3731 and VL antibody domains connected into a single polypeptide chain. Preferably, the scFv
3732 polypeptide further comprises a polypeptide linker between the VH and VL domains which
3733 enables the scFv to form the desired structure for antigen binding. For a review of the scFv, see
3734 Pluckthun, in: The Pharmacology of Monoclonal Antibodies, vol. 113 (1994), editors
3735 Rosenburg and Moore, Springer-Verlag (New York), p. 269-315.
3736
3737 The term "diabody" refers to a small antibody fragment prepared by constructing scFv
3738 fragments (see preceding paragraph) with short linkers (about 5-25 residues) between the VH
3739 and VL domains such that inter-chain but not intra-chain pairing of the V domains is achieved,
3740 thereby resulting in a bivalent fragment, i.e., a fragment having two antigen-binding sites.
3741 Bispecific diabodies are heterodimers of two "crossover" scFv fragments in which the VH and
3742 VL domains of the two antibodies are present on different polypeptide chains. Diabodies are
3743 described in greater detail in, for example, EP 0404097; WO 93/11161; Hollinger et al., Proc.
3744 Natl. Acad. Sci. USA (1993), vol. 90, p. 6444-6448.
3745
3746 Embodiment 432: The compound according to any one of embodiments 375 to 426 or 430 to
3747 431, wherein said compound is a multispecific molecule.
3748
3749 Embodiment 433: The compound according to any one of embodiments 375 to 426 or 428 to
3750 430, wherein said compound is a bispecific molecule that is specific for IL-18Ra and IL-18Rp. 3751
3752 Embodiment 434: The compound according to any one of embodiments 375 to 426 or 428 to
3753 430 or 433, wherein said compound is a bispecific molecule that binds to IL-18Ra and IL-
3754 18R .
3755
3756 Embodiment 435: The compound according to any one of embodiments 375 to 426 or 428 to
3757 430 or 433 to 434, wherein said compound is a bispecific molecule directed to IL-18Ra and IL-
3758 18R .
3759
3760 Embodiment 436: The compound according to any one of embodiments 375 to 426 or 428 to
3761 430 or 433 to 435, wherein said compound is a bispecific antibody molecule that is specific for
3762 IL-18Ra and IL-18Rp.
3763
3764 If the present disclosure refers to "IL-18Ra" without indicating a specific organism from which
3765 said IL-18Ra originates, then this refers to human IL-18Ra. If the present disclosure refers to
3766 "IL-18RP" without indicating a specific organism from which said IL-18RP originates, then
3767 this refers to human IL-18RP.
3768
3769 According to a twelfth aspect, the present disclosure relates to any of the following (To the
3770 twelfth aspect of the present disclosure and the embodiments referring thereto, the same
3771 explanations and definitions apply accordingly as for the first to eleventh aspects of the present
3772 disclosure and the embodiments referring thereto.):
3773
3774 Embodiment 437: A compound which is a bispecific antibody molecule comprising an IL-
3775 18Ra-binding VHH with the amino acid sequence of SEQ ID NO: 1 (First binding module) and
3776 an IL18RP-binding VHH with the amino acid sequence of SEQ ID NO: 12 (Second binding
3777 module).
3778
3779 Embodiment 438: A compound which is a bispecific antibody molecule comprising an IL-
3780 18Ra-binding VHH with the amino acid sequence of SEQ ID NO: 1 (First binding module) and
3781 an IL18RP-binding VHH with the amino acid sequence of SEQ ID NO: 13 (Second binding
3782 module).
3783 3784 Embodiment 439: A compound which is a bispecific antibody molecule comprising an IL-
3785 18Ra-binding VHH with the amino acid sequence of SEQ ID NO: 1 (First binding module) and
3786 an IL18RP-binding VHH with the amino acid sequence of SEQ ID NO: 15 (Second binding
3787 module).
3788
3789 Embodiment 440: A compound which is a bispecific antibody molecule comprising an IL-
3790 18Ra-binding VHH with the amino acid sequence of SEQ ID NO: 1 (First binding module) and
3791 an IL18RP-binding VHH with the amino acid sequence of SEQ ID NO: 17 (Second binding
3792 module).
3793
3794 Embodiment 441: A compound which is a bispecific antibody molecule comprising an IL-
3795 18Ra-binding VHH with the amino acid sequence of SEQ ID NO: 1 (First binding module) and
3796 an IL18RP-binding VHH with the amino acid sequence of SEQ ID NO: 20 (Second binding
3797 module).
3798
3799 Embodiment 442: A compound which is a bispecific antibody molecule comprising an IL-
3800 18Ra-binding VHH with the amino acid sequence of SEQ ID NO: 1 (First binding module) and
3801 an IL18RP-binding VHH with the amino acid sequence of SEQ ID NO: 21 (Second binding
3802 module).
3803
3804 Embodiment 443: A compound which is a bispecific antibody molecule comprising an IL-
3805 18Ra-binding VHH with the amino acid sequence of SEQ ID NO: 1 (First binding module) and
3806 an IL18RP-binding VHH with the amino acid sequence of SEQ ID NO: 22 (Second binding
3807 module).
3808
3809 Embodiment 444: A compound which is a bispecific antibody molecule comprising an IL-
3810 18Ra-binding VHH with the amino acid sequence of SEQ ID NO: 2 (First binding module) and
3811 an IL18RP-binding VHH with the amino acid sequence of SEQ ID NO: 12 (Second binding
3812 module).
3813
3814 Embodiment 445: A compound which is a bispecific antibody molecule comprising an IL-
3815 18Ra-binding VHH with the amino acid sequence of SEQ ID NO: 2 (First binding module) and
3816 an IL18RP-binding VHH with the amino acid sequence of SEQ ID NO: 13 (Second binding
3817 module). 3818
3819 Embodiment 446: A compound which is a bispecific antibody molecule comprising an IL-
3820 18Ra-binding VHH with the amino acid sequence of SEQ ID NO: 2 (First binding module) and
3821 an IL18RP-binding VHH with the amino acid sequence of SEQ ID NO: 15 (Second binding
3822 module).
3823
3824 Embodiment 447: A compound which is a bispecific antibody molecule comprising an IL-
3825 18Ra-binding VHH with the amino acid sequence of SEQ ID NO: 2 (First binding module) and
3826 an IL18RP-binding VHH with the amino acid sequence of SEQ ID NO: 17 (Second binding
3827 module).
3828
3829 Embodiment 448: A compound which is a bispecific antibody molecule comprising an IL-
3830 18Ra-binding VHH with the amino acid sequence of SEQ ID NO: 2 (First binding module) and
3831 an IL18RP-binding VHH with the amino acid sequence of SEQ ID NO: 18 (Second binding
3832 module).
3833
3834 Embodiment 449: A compound which is a bispecific antibody molecule comprising an IL-
3835 18Ra-binding VHH with the amino acid sequence of SEQ ID NO: 2 (First binding module) and
3836 an IL18RP-binding VHH with the amino acid sequence of SEQ ID NO: 20 (Second binding
3837 module).
3838
3839 Embodiment 450: A compound which is a bispecific antibody molecule comprising an IL-
3840 18Ra-binding VHH with the amino acid sequence of SEQ ID NO: 2 (First binding module) and
3841 an IL18RP-binding VHH with the amino acid sequence of SEQ ID NO: 21 (Second binding
3842 module).
3843
3844 Embodiment 451: A compound which is a bispecific antibody molecule comprising an IL-
3845 18Ra-binding VHH with the amino acid sequence of SEQ ID NO: 5 (First binding module) and
3846 an IL18RP-binding VHH with the amino acid sequence of SEQ ID NO: 13 (Second binding
3847 module).
3848
3849 Embodiment 452: A compound which is a bispecific antibody molecule comprising an IL-
3850 18Ra-binding VHH with the amino acid sequence of SEQ ID NO: 5 (First binding module) and 3851 an IL18RP-binding VHH with the amino acid sequence of SEQ ID NO: 14 (Second binding
3852 module).
3853
3854 Embodiment 453: A compound which is a bispecific antibody molecule comprising an IL-
3855 18Ra-binding VHH with the amino acid sequence of SEQ ID NO: 6 (First binding module) and
3856 an IL18RP-binding VHH with the amino acid sequence of SEQ ID NO: 17 (Second binding
3857 module).
3858
3859 Embodiment 454: A compound which is a bispecific antibody molecule comprising an IL-
3860 18Ra-binding VHH with the amino acid sequence of SEQ ID NO: 6 (First binding module) and
3861 an IL18RP-binding VHH with the amino acid sequence of SEQ ID NO: 20 (Second binding
3862 module).
3863
3864 Embodiment 455: A compound which is a bispecific antibody molecule comprising an IL-
3865 18Ra-binding VHH with the amino acid sequence of SEQ ID NO: 6 (First binding module) and
3866 an IL18RP-binding VHH with the amino acid sequence of SEQ ID NO: 21 (Second binding
3867 module).
3868
3869 Embodiment 456: A compound which is a bispecific antibody molecule comprising an IL-
3870 18Ra-binding VHH with the amino acid sequence of SEQ ID NO: 6 (First binding module) and
3871 an IL18RP-binding VHH with the amino acid sequence of SEQ ID NO: 22 (Second binding
3872 module).
3873
3874 Embodiment 457: A compound which is a bispecific antibody molecule comprising an IL-
3875 18Ra-binding VHH with the amino acid sequence of SEQ ID NO: 8 (First binding module) and
3876 an IL18RP-binding VHH with the amino acid sequence of SEQ ID NO: 12 (Second binding
3877 module).
3878
3879 Embodiment 458: A compound which is a bispecific antibody molecule comprising an IL-
3880 18Ra-binding VHH with the amino acid sequence of SEQ ID NO: 8 (First binding module) and
3881 an IL18RP-binding VHH with the amino acid sequence of SEQ ID NO: 13 (Second binding
3882 module).
3883 3884 Embodiment 459: A compound which is a bispecific antibody molecule comprising an IL-
3885 18Ra-binding VHH with the amino acid sequence of SEQ ID NO: 8 (First binding module) and
3886 an IL18RP-binding VHH with the amino acid sequence of SEQ ID NO: 17 (Second binding
3887 module).
3888
3889 Embodiment 460: A compound which is a bispecific antibody molecule comprising an IL-
3890 18Ra-binding VHH with the amino acid sequence of SEQ ID NO: 8 (First binding module) and
3891 an IL18RP-binding VHH with the amino acid sequence of SEQ ID NO: 18 (Second binding
3892 module).
3893
3894 Embodiment 461: A compound which is a bispecific antibody molecule comprising an IL-
3895 18Ra-binding VHH with the amino acid sequence of SEQ ID NO: 8 (First binding module) and
3896 an IL18RP-binding VHH with the amino acid sequence of SEQ ID NO: 20 (Second binding
3897 module).
3898
3899 Embodiment 462: A compound which is a bispecific antibody molecule comprising an IL-
3900 18Ra-binding VHH with the amino acid sequence of SEQ ID NO: 8 (First binding module) and
3901 an IL18RP-binding VHH with the amino acid sequence of SEQ ID NO: 21 (Second binding
3902 module).
3903
3904 Embodiment 463: A compound which is a bispecific antibody molecule comprising an IL-
3905 18Ra-binding VHH with the amino acid sequence of SEQ ID NO: 9 (First binding module) and
3906 an IL18RP-binding VHH with the amino acid sequence of SEQ ID NO: 12 (Second binding
3907 module).
3908
3909 Embodiment 464: A compound which is a bispecific antibody molecule comprising an IL-
3910 18Ra-binding VHH with the amino acid sequence of SEQ ID NO: 9 (First binding module) and
3911 an IL18RP-binding VHH with the amino acid sequence of SEQ ID NO: 13 (Second binding
3912 module).
3913
3914 Embodiment 465: A compound which is a bispecific antibody molecule comprising an IL-
3915 18Ra-binding VHH with the amino acid sequence of SEQ ID NO: 9 (First binding module) and
3916 an IL18RP-binding VHH with the amino acid sequence of SEQ ID NO: 15 (Second binding
3917 module). 3918
3919 Embodiment 466: A compound which is a bispecific antibody molecule comprising an IL-
3920 18Ra-binding VHH with the amino acid sequence of SEQ ID NO: 9 (First binding module) and
3921 an IL18RP-binding VHH with the amino acid sequence of SEQ ID NO: 17 (Second binding
3922 module).
3923
3924 Embodiment 467: A compound which is a bispecific antibody molecule comprising an IL-
3925 18Ra-binding VHH with the amino acid sequence of SEQ ID NO: 9 (First binding module) and
3926 an IL18RP-binding VHH with the amino acid sequence of SEQ ID NO: 20 (Second binding
3927 module).
3928
3929 Embodiment 468: A compound which is a bispecific antibody molecule comprising an IL-
3930 18Ra-binding VHH with the amino acid sequence of SEQ ID NO: 9 (First binding module) and
3931 an IL18RP-binding VHH with the amino acid sequence of SEQ ID NO: 21 (Second binding
3932 module).
3933
3934 Embodiment 469: A compound which is a bispecific antibody molecule comprising an IL-
3935 18Ra-binding VHH with the amino acid sequence of SEQ ID NO: 9 (First binding module) and
3936 an IL18RP-binding VHH with the amino acid sequence of SEQ ID NO: 22 (Second binding
3937 module).
3938
3939 Embodiment 470: A compound which is a bispecific antibody molecule comprising an IL-
3940 18Ra-binding VHH with the amino acid sequence of SEQ ID NO: 10 (First binding module)
3941 and an IL18RP-binding VHH with the amino acid sequence of SEQ ID NO: 13 (Second binding
3942 module).
3943
3944 Embodiment 471 : A compound which is a bispecific antibody molecule comprising an IL-
3945 18Ra-binding VHH with the amino acid sequence of SEQ ID NO: 10 (First binding module)
3946 and an IL18RP-binding VHH with the amino acid sequence of SEQ ID NO: 20 (Second binding
3947 module).
3948
3949 Embodiment 472: A compound which is a bispecific antibody molecule comprising an IL-
3950 18Ra-binding VHH with the amino acid sequence of SEQ ID NO: 10 (First binding module) 3951 and an IL18RP-binding VHH with the amino acid sequence of SEQ ID NO: 21 (Second binding
3952 module).
3953
3954 Embodiment 473: The compound according to any one of embodiments 375 or 377 to 472,
3955 wherein said compound is monovalent for binding to IL-18Ra.
3956
3957 Embodiment 474: The compound according to any one of embodiments 375 or 377 to 472,
3958 wherein said compound is bivalent for binding to IL-18Ra.
3959
3960 Embodiment 475: The compound according to any one of embodiments 375 or 377 to 472,
3961 wherein said compound is multivalent for binding to IL-18Ra.
3962
3963 Embodiment 476: The compound according to any one of embodiments 376 to 475, wherein
3964 said compound is monovalent for binding to IL-18RP.
3965
3966 Embodiment 477: The compound according to any one of embodiments 376 to 475, wherein
3967 said compound is bivalent for binding to IL-18RP.
3968
3969 Embodiment 478: The compound according to any one of embodiments 376 to 475, wherein
3970 said compound is multivalent for binding to IL-18RP.
3971
3972 Embodiment 479: The compound according to any one of embodiments 377 to 478, wherein
3973 said compound comprises one copy of said first binding module.
3974
3975 Embodiment 480: The compound according to any one of embodiments 377 to 478, wherein
3976 said compound comprises two copies of said first binding module.
3977
3978 Embodiment 481: The compound according to any one of embodiments 377 to 478, wherein
3979 said compound comprises two or more copies of said first binding module.
3980
3981 Embodiment 482: The compound according to any one of embodiments 377 to 479, wherein
3982 said compound comprises not more than one copy of said first binding module.
3983 3984 Embodiment 483: The compound according to any one of embodiments 377 to 478 or 480,
3985 wherein said compound comprises not more than two copies of said first binding module.
3986
3987 Embodiment 484: The compound according to any one of embodiments 377 to 483, wherein
3988 said compound comprises one copy of said second binding module.
3989
3990 Embodiment 485: The compound according to any one of embodiments 377 to 483, wherein
3991 said compound comprises two copies of said second binding module.
3992
3993 Embodiment 486: The compound according to any one of embodiments 377 to 483, wherein
3994 said compound comprises two or more copies of said second binding module.
3995
3996 Embodiment 487: The compound according to any one of embodiments 377 to 484, wherein
3997 said compound comprises not more than one copy said second binding module.
3998
3999 Embodiment 488: The compound according to any one of embodiments 377 to 483 or 485,
4000 wherein said compound comprises not more than two copies of said second binding module.
4001
4002 Embodiment 489: The compound according to any one of embodiments 375 to 488, wherein
4003 said compound comprises only one molecular structure that binds to IL-18Ra.
4004
4005 Embodiment 490: The compound according to any one of embodiments 375 to 489, wherein
4006 said compound comprises only one molecular structure that binds to IL-18RP.
4007
4008 Embodiment 491: The compound according to any one of embodiments 375 to 490, wherein
4009 all components of said compound are covalently linked.
4010
4011 Embodiment 492: The compound according to any one of embodiments 377 to 491, wherein
4012 said first binding module is a VHH antibody domain. As the skilled person understands, by
4013 stating that the first binding module "is a VHH antibody domain", the present disclosure
4014 indicates that the first binding module is a full VHH antibody domain, not just a fragment
4015 thereof.
4016 4017 Embodiment 493: The compound according to any one of embodiments 377 to 492, wherein
4018 said second binding module is a VHH antibody domain.
4019
4020 Embodiment 494: The compound according to any one of embodiments 377 to 491, wherein
4021 said first binding module consists of a fragment of a VHH antibody domain. As the skilled
4022 person understands, by stating that the first binding module "consists of a fragment of a VHH
4023 antibody domain", the present disclosure indicates that the first binding module is a fragment
4024 of a VHH antibody domain, not a full-length VHH antibody domain.
4025
4026 Embodiment 495: The compound according to any one of embodiments 377 to 491 or 494,
4027 wherein said second binding module consists of a fragment of a VHH antibody domain.
4028
4029 Embodiment 496: The compound according to any one of embodiments 375 to 495, wherein
4030 said compound comprises an antibody Fc region.
4031
4032 As used herein, the term "antibody Fc region" refers to the portion of a native immunoglobulin
4033 formed by the Fc domains of its two heavy chains (which includes a heavy chain constant region
4034 1 (CHI), a heavy chain constant region 2 (CH2) and a heavy chain constant region 3 (CH3) of
4035 an immunoglobulin, but does not include variable regions of the heavy and light chains and a
4036 light chain constant region 1 (CL1) of an immunoglobulin). A native Fc region is homodimeric.
4037 In some embodiments, the term includes variant Fc regions with one or more alterations relative
4038 to a native Fc region. An Fc region may be altered by amino acid substitutions, additions and/or
4039 deletions, linkage of additional moieties, and/or alteration of the native glycans. The term
4040 encompasses Fc regions wherein each of the constituent Fc domains is different. Examples of
4041 heterodimeric Fc regions include, without limitation, Fc regions made using the "knobs into
4042 holes" technology as described in, for example US Patent No. 8,216,805 or by the SEED
4043 technology as described in WO 2016/087650.
4044
4045 Embodiment 497: The compound according to any one of embodiments 375 to 495, wherein
4046 said compound comprises an antibody Fc region that is competent in Fc receptor binding.
4047
4048 An antibody Fc region is "competent in FC receptor binding" if said antibody Fc region is
4049 capable of binding to at least one of the Fc receptors (FcyRI, FcyRII, and FcyRIII subclasses,
4050 including allelic variants and alternatively spliced forms of these receptors). 4051
4052 Embodiment 498: The compound according to any one of embodiments 375 to 495, wherein
4053 said compound comprises an antibody Fc region that is not competent in Fc receptor binding.
4054
4055 Embodiment 499: The compound according to any one of embodiments 375 to 495, wherein
4056 said compound does not comprise an effector-competent antibody Fc region.
4057
4058 An "effector-competent" Fc region is an Fc region having the functional ability to bind proteins
4059 and/or cells of the immune system and mediate biological effects normally induced following
4060 the binding of an antibody to a corresponding antigen. Such biological effects include e.g. the
4061 ability to bind a complement protein (e.g. Clq), resulting in activation of the classical
4062 complement system leading to the opsonisation and lysis of cell pathogens (complement¬
4063 dependent cytotoxicity, CDCC). Other biological effects are endocytosis of immune
4064 complexes, engulfment and destruction of antibody-coated particles or microorganisms (also
4065 called antibody-dependent phagocytosis, or ADCP), clearance of immune complexes, lysis of
4066 antibody-coated target cells by killer cells (called antibody-dependent cell-mediated
4067 cytotoxicity, or ADCC), release of inflammatory mediators, regulation of immune system cell
4068 activation or control of immunoglobulin production.
4069
4070 Embodiment 500: The compound according to any one of embodiments 375 to 497, wherein
4071 said compound comprises an effector-competent antibody Fc region.
4072
4073 Embodiment 501 : The compound according to any one of embodiments 375 to 495 or 498 to
4074 499, wherein said compound does not comprise an antibody Fc region capable of inducing
4075 ADCC (antibody-dependent cellular cytotoxicity).
4076
4077 Embodiment 502: The compound according to any one of embodiments 375 to 497 or 500,
4078 wherein said compound comprises an antibody Fc region capable of inducing ADCC.
4079
4080 Embodiment 503: The compound according to any one of embodiments 375 to 499, wherein
4081 said compound comprises an antibody Fc region that is not capable of inducing ADCC.
4082
4083 Embodiment 504: The compound according to any one of embodiments 375 to 503, wherein
4084 that antibody Fc region carries a mutation E430G. 4085
4086 This mutation is described in de Jong et al., 2016 and has been reported to drive antibody
4087 hexamerization upon target cell binding.
4088
4089 Embodiment 505: The compound according to any one of embodiments 377 to 504, wherein
4090 said compound is a bispecific antibody molecule prepared by the SEED technology (i.e. a
4091 SEEDbody).
4092
4093 The SEED (strand-exchange engineered domain) technology is an approach for generation of
4094 bispecific antibodies in which structurally related sequences within the conserved CH3 domains
4095 of human IgA and IgG are exchanged to form two asymmetric but complementary domains
4096 (see the Examples section). For details about the SEED technology are described in WO
4097 2016/087650 and Davis et al., 2010. A bispecific antibody prepared by the SEED technology
4098 is herein also referred to as "SEEDbody".
4099
4100 Embodiment 506: The compound according to any one of embodiments 377 to 505, wherein
4101 the VHH antibody domain or fragment thereof of the first binding module is formed by a
4102 sequence selected from the group consisting of SEQ ID NO: 89, SEQ ID NO: 90, SEQ ID NO:
4103 91, SEQ ID NO: 92, SEQ ID NO: 94, SEQ ID NO: 95, SEQ ID NO: 96, SEQ ID NO: 97, SEQ
4104 ID NO: 98 and SEQ ID NO: 99,
4105 and wherein the VHH antibody domain or fragment thereof of the second binding module is
4106 formed by a sequence selected from the group consisting of SEQ ID NO: 100, SEQ ID NO:
4107 101, SEQ ID NO: 102, SEQ ID NO: 103, SEQ ID NO: 104, SEQ ID NO: 105, SEQ ID NO:
4108 106, SEQ ID NO: 107, SEQ ID NO: 108, SEQ ID NO: 109 and SEQ ID NO: 110.
4109
4110 SEQ ID NO: 89 to 99 define the amino acid sequences of SEED AG chains based on VHH1 to
4111 VHH11 (al to pi l). SEQ ID NO: 100 to 110 define the amino acid sequences of SEED GA
4112 chains based on VHH12 to VHH22 (pi2 to P22).
4113
4114 Embodiment 507: The compound according to any one of embodiments 377 to 506, wherein
4115 said compound is a bispecific antibody with a strictly monovalent (1+1) bispecific sdAb (single¬
4116 domain antibody) architecture.
4117 4118 Embodiment 508: The compound according to any one of embodiments 377 to 507, wherein
4119 said compound comprises two VHHs of different binding specificity, and each of these VHHs
4120 is present in said compound in only one copy. As the skilled person understands, if the
4121 compound is a bispecific antibody comprising a first and a second binding module, then
4122 typically one VHH forms the first binding module of said compound whereas the other VHH
4123 forms the second binding module of said compound.
4124
4125 Embodiment 509: The compound according to any one of embodiments 377 to 504 or 506 to
4126 508, wherein said compound is a single domain-based IgG (sdlgG).
4127
4128 Embodiment 510: The compound according to embodiment 509, wherein a sdlgG is a
4129 conventional IgG antibody in which the two VH regions are replaced by VHH domains of one
4130 binding specificity, and the two VL regions are replaced by VHH domains of a different binding
4131 specificity, resulting in a bispecific, tetravalent antibody.
4132
4133 The single domain-based IgG (sdlgG) format is described in detail in Pekar et al., 2020.
4134
4135 Embodiment 511: The compound according to any one of embodiments 509 to 510, wherein
4136 said sdlgG is a conventional IgG antibody in which each of the two VH regions is replaced by
4137 a copy of said first binding module, and each of the two VL regions is replaced by a copy of
4138 said second binding module, resulting in a bispecific, tetravalent antibody.
4139
4140 Embodiment 512: The compound according to embodiment 511, wherein the first binding
4141 module is a VHH that has been grafted onto the CHI domain of the heavy chain of an IgGl and
4142 the second binding module is a VHH that has been grafted onto the constant region of the
4143 lambda light chain of an IgGl .
4144
4145 Embodiment 513: The compound according to any one of embodiments 510 to 512, wherein
4146 said IgG/IgGl is a human IgGl.
4147
4148 Embodiment 514: The compound according to any one of embodiments 377 to 504 or 507 to
4149 to 513, wherein the IL-18Ra-specific VHH2 (SEQ ID NO: 2) has been grafted onto the CHI
4150 domain of the heavy chain of an IgGl and the IL-18RP-specific VHH15 (SEQ ID NO: 15) has
4151 been grafted onto the constant region of the lambda light chain of an IgGl. 4152
4153 Embodiment 515: The compound according to any one of embodiments 377 to 514, wherein
4154 said heavy chain of said IgG is effector-silenced.
4155
4156 Embodiment 516: The compound according to any one of embodiments 377 to 504 or 515,
4157 wherein said compound consists of a IgG Fc region to which two copies of a tandem-VHH
4158 arrangement are covalently linked at the hinge-region, wherein said tandem-VHH arrangement
4159 consists of a first VHH antibody domain that is covalently linked to a second VHH antibody
4160 domain, wherein said second VHH antibody domain is covalently linked to the hinge region of
4161 said Fc region, resulting in a bispecific, tetravalent compound.
4162
4163 Embodiment 517: The compound according to embodiment 516, wherein said IgG Fc region is
4164 an effector-silenced IgGl Fc region.
4165
4166 Embodiment 518: The compound according to any one of embodiments 516 to 517, wherein
4167 said first binding module forms said first VHH antibody domain and said second binding
4168 module forms said second VHH antibody domain.
4169
4170 Embodiment 519: The compound according to any one of embodiments 516 to 518, wherein
4171 said first VHH antibody domain and said second VHH antibody domain are separated by a
4172 linker.
4173
4174 Embodiment 520: The compound according to any one of embodiments 516 to 519, wherein
4175 said first VHH antibody domain and said second VHH antibody domain are separated by a five
4176 amino acid Gly4Ser-linker.
4177
4178 Embodiment 521: The compound according to any one of embodiments 516 to 520, wherein
4179 said first VHH antibody domain is specific for IL-18Ra and said second VHH antibody domain
4180 is specific for IL-18RP.
4181
4182 Embodiment 522: The compound according to any one of embodiments 516 to 521, wherein
4183 said first VHH antibody domain has the amino acid sequence of VHH2 (SEQ ID NO: 2) and
4184 said second VHH antibody domain has the amino acid sequence of VHH15 (SEQ ID NO: 15).
4185 4186 Embodiment 523: The compound according to any one of embodiments 516 to 520, wherein
4187 said first VHH antibody domain is specific for IL-18RP and said second VHH antibody domain
4188 is specific for IL-18Ra.
4189
4190 Embodiment 524: The compound according to any one of embodiments 516 to 520 or 523,
4191 wherein said first VHH antibody domain has the amino acid sequence of VHH15 (SEQ ID NO:
4192 15) and said second VHH antibody domain has the amino acid sequence of VHH2 (SEQ ID
4193 NO: 2).
4194
4195 Embodiment 525: The compound according to any one of embodiments 516 to 524, wherein
4196 the orientation of the first and second VHH antibody domains is the first VHH antibody
4197 domains followed by the second VHH antibody domain (from N-terminus to C-terminus).
4198
4199 Embodiment 526: The compound according to any one of embodiments 516 to 525, wherein
4200 the orientation of the first and second VHH antibody domains is the second VHH antibody
4201 domains followed by the first VHH antibody domain (from N-terminus to C-terminus).
4202
4203 Embodiment 527: The compound according to any one of embodiments 375 to 526, wherein
4204 said compound is an IL-18 mimetic.
4205
4206 As used herein, the term "mimetic" refers to a compound that imitates certain aspects of the
4207 function of another compound. Provided herein are, among other things, IL-18 mimetics. IL-
4208 18 is a proinflammatory cytokine belonging to the IL-1 family of cytokines that mediates
4209 signalling through heterodimerization of the receptor subunits IL-18Ra and IL-18RP (Yasuda
4210 et al., 2019; Dinarello et al., 2013). IL-18 stimulates IFN-y production in innate lymphoid cells
4211 as well as antigen-experienced T cells in synergy with IL-12. The aspects of the function of
4212 IL 18 that such IL- 18 mimetics imitate is the induction of heterodimerization of IL-18R (from
4213 IL-18Ra and IL-18RP) in the presence of IL-12 (or IL-15). Without being bound by theory, it
4214 is speculated that by binding to both IL-18Ra and IL-18RP, the IL-18 mimetics of the present
4215 disclosure crosslink IL-18Ra and IL-18RP, thus leading to dimerization and activation of IL-
4216 18R in the presence of IL-12 (or IL-15). Thus, the IL-18 mimetics of the present disclosure
4217 imitate the biological function of IL-18, for example the function of IL-18 to induce IFN-y
4218 release (in the presence of IL-12 or IL-15).
4219 4220 Embodiment 528: The compound according to embodiment 527, wherein said IL- 18 mimetic
4221 is not affected from inhibition by IL-18BP (IL-18 binding protein).
4222
4223 Embodiment 529: The compound according to any one of embodiments 375 to 528, wherein
4224 said compound is a IL-18 receptor (IL-18R) agonist.
4225
4226 Embodiment 530: The compound according to any one of embodiments 375 to 529, wherein
4227 said compound is a cytokine mimetic targeting IL-18Ra and IL-18RP.
4228
4229 Embodiment 531: The compound according to any one of embodiments 375 to 530, wherein
4230 said compound binds to IL-18Ra.
4231
4232 Embodiment 532: The compound according to any one of embodiments 375 to 531, wherein
4233 said compound specifically binds to IL-18Ra.
4234
4235 Embodiment 533: The compound according to any one of embodiments 375 to 532, wherein
4236 said compound is capable of binding to IL-18Ra with an affinity that is at least equal to the
4237 affinity with which VHH1 (SEQ ID NO: 1), VHH2 (SEQ ID NO: 2), VHH3 (SEQ ID NO: 3),
4238 VHH4 (SEQ ID NO: 4), VHH5 (SEQ ID NO: 5), VHH6 (SEQ ID NO: 6), VHH8 (SEQ ID NO:
4239 8), VHH9 (SEQ ID NO: 9) or VHH10 (SEQ ID NO: 10) binds to IL-18Ra (or stronger).
4240
4241 Embodiment 534: The compound according to any one of embodiments 375 to 533, wherein
4242 said compound binds to IL-18RP.
4243
4244 Embodiment 535: The compound according to any one of embodiments 375 to 534, wherein
4245 said compound specifically binds to IL-18RP.
4246
4247 Embodiment 536: The compound according to any one of embodiments 375 to 535, wherein
4248 said compound is capable of binding to IL-18RP with an affinity that is at least equal to the
4249 affinity with which VHH12 (SEQ ID NO: 12), VHH13 (SEQ ID NO: 13), VHH14 (SEQ ID
4250 NO: 14), VHH15 (SEQ ID NO: 15), VHH16 (SEQ ID NO: 16), VHH17 (SEQ ID NO: 17),
4251 VHH18 (SEQ ID NO: 18), VHH20 (SEQ ID NO: 20), VHH21 (SEQ ID NO: 21) or VHH22
4252 (SEQ ID NO: 22) binds to IL-18RP (or stronger).
4253 4254 Embodiment 537: The compound according to any one of embodiments 375 to 536, wherein
4255 said compound binds to IL-18Ra and IL-18RP.
4256
4257 Embodiment 538: The compound according to any one of embodiments 375 to 537, wherein
4258 said compound specifically binds to IL-18Ra and IL-18Rp.
4259
4260 Embodiment 539: The compound according to any one of embodiments 375 to 538, wherein
4261 said compound is capable of crosslinking IL-18Ra and IL-18RP.
4262
4263 Embodiment 540: The compound according to any one of embodiments 375 to 539, wherein
4264 said compound is capable of inducing heterodimerization of IL-18Ra and IL-18RP.
4265
4266 Such binding/crosslinking/heterodimerization can be determined by in vitro binding
4267 experiments as described in Example 1 below (by biolayer interferometry).
4268
4269 Embodiment 541: The compound according to any one of embodiments 375 to 540, wherein
4270 said compound binds to IL-18Ra ECD with a KD of 100 nM or stronger.
4271
4272 Embodiment 542: The compound according to any one of embodiments 375 to 540, wherein
4273 said compound binds to IL-18Ra ECD with a KD of 50 nM or stronger.
4274
4275 Embodiment 543: The compound according to any one of embodiments 375 to 540, wherein
4276 said compound binds to IL-18Ra ECD with a KD of 25 nM or stronger.
4277
4278 Embodiment 544: The compound according to any one of embodiments 375 to 540, wherein
4279 said compound binds to IL-18Ra ECD with a KD of 10 nM or stronger.
4280
4281 Embodiment 545: The compound according to any one of embodiments 375 to 540, wherein
4282 said compound binds to IL-18Ra ECD with a KD of 1 nM or stronger.
4283
4284 Embodiment 546: The compound according to any one of embodiments 375 to 540, wherein
4285 said compound binds to IL-18Ra ECD with a KD of 500 pM or stronger.
4286 4287 Embodiment 547: The compound according to any one of embodiments 375 to 540, wherein
4288 said compound binds to IL-18Ra ECD with a KD of 100 pM or stronger.
4289
4290 Embodiment 548: The compound according to any one of embodiments 375 to 540, wherein
4291 said compound binds to IL-18Ra ECD with a KD of 10 pM or stronger.
4292
4293 Embodiment 549: The compound according to any one of embodiments 375 to 548, wherein
4294 said compound binds to IL-18RP ECD with a KD of 100 nM or stronger.
4295
4296 Embodiment 550: The compound according to any one of embodiments 375 to 548, wherein
4297 said compound binds to IL-18RP ECD with a KD of 50 nM or stronger.
4298
4299 Embodiment 551: The compound according to any one of embodiments 375 to 548, wherein
4300 said compound binds to IL-18RP ECD with a KD of 25 nM or stronger.
4301
4302 Embodiment 552: The compound according to any one of embodiments 375 to 548, wherein
4303 said compound binds to IL-18RP ECD with a KD of 10 nM or stronger.
4304
4305 Embodiment 553: The compound according to any one of embodiments 375 to 548, wherein
4306 said compound binds to IL-18RP ECD with a KD of 1 nM or stronger.
4307
4308 Embodiment 554: The compound according to any one of embodiments 375 to 548, wherein
4309 said compound binds to IL-18RP ECD with a KD of 500 pM or stronger.
4310
4311 Embodiment 555: The compound according to any one of embodiments 375 to 548, wherein
4312 said compound binds to IL-18RP ECD with a KD of 100 pM or stronger.
4313
4314 Embodiment 556: The compound according to any one of embodiments 375 to 548, wherein
4315 said compound binds to IL-18RP ECD with a KD of 10 pM or stronger.
4316
4317 Embodiment 557: The compound according to any one of embodiments 375 to 556, wherein
4318 said compound shows competitive binding with recombinant human IL-18 for targeting IL-
4319 18Ra.
4320 4321 Embodiment 558: The compound according to any one of embodiments 375 to 557, wherein
4322 said compound shows competitive binding with recombinant human IL-18 for targeting IL-
4323 18R .
4324
4325 Embodiment 559: The compound according to any one of embodiments 375 to 558, wherein
4326 said compound is capable of activating the IL-18 receptor IL-18R.
4327
4328 Embodiment 560: The compound according to any one of embodiments 375 to 559, wherein
4329 said compound is capable of activating the IL-18 receptor IL-18R by binding to IL-18Ra and
4330 IL-18RP.
4331
4332 Embodiment 561: The compound according to any one of embodiments 375 to 560, wherein
4333 said compound is capable of activating the IL-18 receptor IL-18R by cross-linking the IL-18
4334 receptor subunits IL-18Ra and IL-18RP.
4335
4336 Embodiment 562: The compound according to any one of embodiments 375 to 558, wherein
4337 said compound is does not activate the IL-18 receptor IL-18R.
4338
4339 Embodiment 563: The compound according to any one of embodiments 375 to 562, wherein
4340 said compound triggers dose-dependent IL-18R downstream signaling on IL-18 reporter cells.
4341
4342 Activation of IL-18R and whether a compound triggers dose-dependent IL-18R downstream
4343 signaling on IL-18 reporter cells can for example be determined as described in Example 1,
4344 section "Human IL-18 HEK reporter assay".
4345
4346 Embodiment 564: The compound according to any one of embodiments 375 to 563, wherein
4347 said compound induces at a concentration of 50 nM at least 1.5-fold higher NFKB activation
4348 than TNF-a at a concentration of 50 nM.
4349
4350 Embodiment 565: The compound according to any one of embodiments 375 to 564, wherein
4351 said compound shows a lower potency of IL-18R receptor activation (as determined from the
4352 ECso of NFKB reporter activation) compared with IL-18.
4353 4354 Embodiment 566: The compound according to any one of embodiments 375 to 565, wherein
4355 said compound shows a lower magnitude of IL-18 activation (as determined by maximal NFKB
4356 activation) compared with IL-18.
4357
4358 Whether a compound shows a higher potency of IL-18R receptor activation (as determined
4359 from the ECso of NFKB reporter activation) compared with IL-18 and/or shows lower
4360 magnitude of IL- 18 activation (as determined by maximal NFKB activation) compared with IL-
4361 18 can be determined based on an assay as described in Example 3 and Example 1, section
4362 "Human IL- 18 HEK reporter assay".
4363
4364 Embodiment 567: The compound according to any one of embodiments 375 to 566, wherein
4365 said IL-18 is recombinant human IL-18.
4366
4367 Embodiment 568: The compound according to any one of embodiments 375 to 567, wherein
4368 said compound induces at a concentration of 1 nM a normalized NFKB reporter activation of
4369 more than 50% relative to the NFKB reporter activation induced by recombinant human IL18
4370 at a concentration of 1 nM or wherein said compound has an ECso for NFKB reporter activation
4371 of less than 0.1 nM.
4372
4373 Embodiment 569: The compound according to any one of embodiments 375 to 568, wherein
4374 said compound induces at a concentration of 1 nM a normalized NFKB reporter activation of
4375 more than 50% relative to the NFKB reporter activation induced by recombinant human IL18
4376 at a concentration of 1 nM.
4377
4378 Embodiment 570: The compound according to any one of embodiments 375 to 569, wherein
4379 said compound has an ECso for NFKB reporter activation of less than 0.1 nM.
4380
4381 Embodiment 571: The compound according to any one of embodiments 375 to 567, wherein
4382 said compound induces at a concentration of 1 nM a normalized NFKB reporter activation of
4383 less than 50% relative to the NFKB reporter activation induced by recombinant human IL 18 at
4384 a concentration of 1 nM or wherein said compound has an ECso for NFKB reporter activation
4385 of more than 0.1 nM.
4386 4387 Embodiment 572: The compound according to any one of embodiments 375 to 567 or 571,
4388 wherein said compound induces at a concentration of 1 nM a normalized NFKB reporter
4389 activation of less than 50% relative to the NFKB reporter activation induced by recombinant
4390 human IL 18 at a concentration of 1 nM.
4391
4392 Embodiment 573: The compound according to any one of embodiments 375 to 567 or 571 to
4393 572, wherein said compound has an ECso for NFKB reporter activation of more than 0.1 nM.
4394
4395 Whether a compound induces at a concentration of 1 nM a normalized NFKB reporter activation
4396 of more or less than 50% relative to the NFKB reporter activation induced by recombinant
4397 human IL 18 at a concentration of 1 nM and/or has an ECso for NFKB reporter activation of less
4398 or more than 0.1 nM can be determined based on an assay as described in Example 3 and
4399 Example 1, section "Human IL-18 HEK reporter assay".
4400
4401 Embodiment 574: The compound according to any one of embodiments 375 to 573, wherein
4402 said compound is capable of inducing IFN-y release by peripheral blood mononuclear cells
4403 (PBMCs) in the presence of low-dose IL-12.
4404
4405 Embodiment 575: The compound according to embodiment 574, wherein said low-dose IL-12
4406 is 10 ng/ml IL-12.
4407
4408 Embodiment 576: The compound according to any one of embodiments 375 to 575, wherein
4409 said IL-12 is recombinant human IL-12.
4410
4411 Details how to determine whether a compound is capable of inducing IFN-y release by
4412 peripheral blood mononuclear cells (PBMCs) in the presence of low-dose IL-12 are described
4413 in Example 1, section "IFN-y release assay".
4414
4415 Embodiment 577: The compound according to any one of embodiments 375 to 576, wherein
4416 said compound has an EC50 for the release of IFN-y from human PBMCs of less than 150 nM.
4417
4418 Embodiment 578: The compound according to any one of embodiments 375 to 576, wherein
4419 said compound has an EC50 for the release of IFN-y from human PBMCs of less than 100 nM.
4420 4421 Embodiment 579: The compound according to any one of embodiments 375 to 576, wherein
4422 said compound has an EC50 for the release of IFN-y from human PBMCs of less than 50 nM.
4423
4424 Embodiment 580: The compound according to any one of embodiments 375 to 576, wherein
4425 said compound has an EC50 for the release of IFN-y from human PBMCs of less than 20 nM.
4426
4427 Embodiment 581: The compound according to any one of embodiments 375 to 576, wherein
4428 said compound has an EC50 for the release of IFN-y from human PBMCs of less than 150 pM.
4429
4430 Embodiment 582: The compound according to any one of embodiments 375 to 576, wherein
4431 said compound has an EC50 for the release of IFN-y from human PBMCs of less than 100 pM.
4432
4433 Embodiment 583: The compound according to any one of embodiments 375 to 576, wherein
4434 said compound has an EC50 for the release of IFN-y from human PBMCs of less than 50 pM.
4435
4436 Embodiment 584: The compound according to any one of embodiments 375 to 576, wherein
4437 said compound has an EC50 for the release of IFN-y from human PBMCs of less than 20 pM.
4438
4439 Embodiment 585: The compound according to any one of embodiments 375 to 584, wherein
4440 the capacity of the compound to trigger IFN-y release on PBMCs (as measured by ECso) is
4441 increased compared to recombinant human IL-18. As the skilled person understands, this means
4442 that the ECso of said compound to trigger IFN-y release on PBMCs is smaller than that of
4443 recombinant human IL-18.
4444
4445 Embodiment 586: The compound according to any one of embodiments 375 to 585, wherein
4446 the EC50 of said compound for the release of IFN-y from human PBMCs is less than 50% of
4447 the EC50 of (rh) IL-18 for the release of IFN-y from human PBMCs.
4448
4449 As used herein, "rh" in the context of a molecule stands for "recombinant human".
4450
4451 Embodiment 587: The compound according to any one of embodiments 375 to 585, wherein
4452 the EC50 of said compound for the release of IFN-y from human PBMCs is less than 200% of
4453 the EC50 of (rh) IL-18 for the release of IFN-y from human PBMCs.
4454 4455 Embodiment 588: The compound according to any one of embodiments 565 to 587, wherein
4456 said EC50 is measured in the presence of low dose (rh) IL-12.
4457
4458 Embodiment 589: The compound according to any one of embodiments 375 to 588, wherein
4459 said compound causes a release of IFN-y that is at least 200% of the IFN-y release caused by
4460 (rh) IL-18.
4461
4462 Embodiment 590: The compound according to any one of embodiments 375 to 588, wherein
4463 said compound causes a release of IFN-y that is at least 150% of the IFN-y release caused by
4464 (rh) IL-18.
4465
4466 Embodiment 591: The compound according to any one of embodiments 375 to 588, wherein
4467 said compound causes a release of IFN-y that is at least 100% of the IFN-y release caused by
4468 (rh) IL-18.
4469
4470 Embodiment 592: The compound according to any one of embodiments 375 to 588, wherein
4471 said compound causes a release of IFN-y that is at least 80% of the IFN-y release caused by (rh)
4472 IL-18.
4473
4474 Embodiment 593: The compound according to any one of embodiments 375 to 588, wherein
4475 said compound causes a release of IFN-y that is at least 50% of the IFN-y release caused by (rh)
4476 IL-18.
4477
4478 Embodiment 594: The compound according to any one of embodiments 375 to 588, wherein
4479 said compound causes a release of IFN-y that is at least 10% of the IFN-y release caused by (rh)
4480 IL-18.
4481
4482 Embodiment 595: The compound according to any one of embodiments 574 to 594, wherein
4483 said IFN-y release is measured upon stimulation of human peripheral blood mononuclear cells
4484 (PBMCs) with said compound (resp. with IL-18) in the presence of low dose recombinant
4485 human IL-12 (10 ng/ml).
4486
4487 Embodiment 596: The compound according to embodiment 595, wherein said compound resp.
4488 said IL-18 is used at a concentration of 1 nM. 4489
4490 Embodiment 597: The compound according to any one of embodiments 574 to 596, wherein
4491 said release of IFN-y is the release of IFN-y at a concentration of 1 nM of said compound resp.
4492 said IL-18.
4493
4494 Embodiment 598: The compound according to any one of embodiments 574 to 595, wherein
4495 said release of IFN-y is the maximum release of IFN-y.
4496
4497 Further details about the assay are described in the Examples section, in particular Example 1,
4498 section "IFN-y release assay".
4499
4500 Embodiment 599: The compound according to any one of embodiments 375 to 598, wherein
4501 said compound is not affected by the presence of IL-18 binding protein (IL-18BP).
4502
4503 Embodiment 600: The compound according to any one of embodiments 375 to 599, wherein
4504 said compound does not bind to recombinant human IL-18 binding protein (IL-18BP).
4505
4506 Embodiment 601: The compound according to any one of embodiments 375 to 600, wherein
4507 binding of said compound to IL-18Ra and IL-18RP is not affected by the presence of IL-18
4508 binding protein (IL-18BP).
4509
4510 Embodiment 602: The compound according to any one of embodiments 375 to 601, wherein
4511 said activation of IL-18R by said compound is not affected by the presence of IL-18 binding
4512 protein (IL-18BP).
4513
4514 Embodiment 603: The compound according to any one of embodiments 375 to 602, wherein
4515 said capacity of said compound to induce IFN-y release is not affected by the presence of IL-
4516 18BP under conditions where the capacity of IL-18 to induce IFN-y release is inhibited by the
4517 presence of IL-18BP.
4518
4519 Embodiment 604: The compound according to any one of embodiments 375 to 603, wherein
4520 the EC50 of said compound for the release of IFN-y from human PBMCs is not increased by
4521 the presence of (rh) IL-18BP (compared to the absence of (rh) IL-18BP) under conditions where 4522 the EC50 of IL-18 for the release of IFN-y from human PBMCs is increased by the presence of
4523 (rh) IL-18BP (compared to the absence of (rh) IL-18BP).
4524
4525 Embodiment 605: The VHH antibody domain or fragment thereof according to any one of
4526 embodiments 1 to 374 or the compound according to any one of embodiments 375 to 604,
4527 wherein said binding is determined by biolayer interferometry at 25°C and 1000 rpm in KB
4528 Buffer (PBS + 0.1 % Tween-20 + 1% BSA).
4529
4530 Embodiment 606: The VHH antibody domain or fragment thereof according to any one of
4531 embodiments 1 to 374 or the compound according to any one of embodiments 375 to 604,
4532 wherein said competition is determined by biolayer interferometry at 25°C and 1000 rpm in KB
4533 Buffer (PBS + 0.1 % Tween-20 + 1% BSA).
4534
4535 Embodiment 607: The VHH antibody domain or fragment thereof according to any one of
4536 embodiments 1 to 374 or the compound according to any one of embodiments 375 to 604,
4537 wherein said crosslinking/heterodimerization is determined by biolayer interferometry at 25°C
4538 and 1000 rpm in KB Buffer (PBS + 0.1 % Tween-20 + 1% BSA).
4539
4540 Embodiment 608: The VHH antibody domain or fragment thereof according to any one of
4541 embodiments 1 to 374 or the compound according to any one of embodiments 375 to 604,
4542 wherein said KD value is measured by kinetic measurements by biolayer interferometry at 25°C
4543 and 1000 rpm in KB Buffer (PBS + 0.1 % Tween-20 + 1% BSA).
4544
4545 According to a thirteenth aspect, the present disclosure relates to any of the following (To the
4546 thirteenth aspect of the present disclosure and the embodiments referring thereto, the same
4547 explanations and definitions apply accordingly as for the first to twelfth aspects of the present
4548 disclosure and the embodiments referring thereto.):
4549
4550 Embodiment 609: A bispecific antibody molecule prepared by the SEED (strand-exchange
4551 engineered domain) technology, said molecule comprising
4552 - an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said
4553 IL-18Ra-binding VHH has the amino acid sequence of SEQ ID NO: 89 ("VHH-SEED-
4554 AG-l") and 4555 - a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
4556 IL18RP-binding VHH has the amino acid sequence of SEQ ID NO: 100 ("VHH-SEED-
4557 GA-1").
4558
4559 Embodiment 610: A bispecific antibody molecule prepared by the SEED (strand-exchange
4560 engineered domain) technology, said molecule comprising
4561 - an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said
4562 IL-18Ra-binding VHH has the amino acid sequence of SEQ ID NO: 89 ("VHH-SEED-
4563 AG-l") and
4564 - a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
4565 IL18RP-binding VHH has the amino acid sequence of SEQ ID NO: 101 ("VHH-SEED-
4566 GA-2").
4567
4568 Embodiment 611 : A bispecific antibody molecule prepared by the SEED (strand-exchange
4569 engineered domain) technology, said molecule comprising
4570 - an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said
4571 IL-18Ra-binding VHH has the amino acid sequence of SEQ ID NO: 89 ("VHH-SEED-
4572 AG-l") and
4573 - a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
4574 IL18RP-binding VHH has the amino acid sequence of SEQ ID NO: 103 ("VHH-SEED-
4575 GA-4").
4576
4577 Embodiment 612: A bispecific antibody molecule prepared by the SEED (strand-exchange
4578 engineered domain) technology, said molecule comprising
4579 - an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said
4580 IL-18Ra-binding VHH has the amino acid sequence of SEQ ID NO: 89 ("VHH-SEED-
4581 AG-l") and
4582 - a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
4583 IL18RP-binding VHH has the amino acid sequence of SEQ ID NO: 105 ("VHH-SEED-
4584 GA-6").
4585
4586 Embodiment 613: A bispecific antibody molecule prepared by the SEED (strand-exchange
4587 engineered domain) technology, said molecule comprising 4588 - an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said
4589 IL-18Ra-binding VHH has the amino acid sequence of SEQ ID NO: 89 ("VHH-SEED-
4590 AG-l") and
4591 - a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
4592 IL18RP-binding VHH has the amino acid sequence of SEQ ID NO: 108 ("VHH-SEED-
4593 GA-9").
4594
4595 Embodiment 614: A bispecific antibody molecule prepared by the SEED (strand-exchange
4596 engineered domain) technology, said molecule comprising
4597 - an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said
4598 IL-18Ra-binding VHH has the amino acid sequence of SEQ ID NO: 89 ("VHH-SEED-
4599 AG-l") and
4600 - a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
4601 IL18RP-binding VHH has the amino acid sequence of SEQ ID NO: 109 ("VHH-SEED-
4602 GA-10").
4603
4604 Embodiment 615: A bispecific antibody molecule prepared by the SEED (strand-exchange
4605 engineered domain) technology, said molecule comprising
4606 - an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said
4607 IL-18Ra-binding VHH has the amino acid sequence of SEQ ID NO: 89 ("VHH-SEED-
4608 AG-l") and
4609 - a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
4610 IL18RP-binding VHH has the amino acid sequence of SEQ ID NO: 110 ("VHH-SEED-
4611 GA-11").
4612
4613 Embodiment 616: A bispecific antibody molecule prepared by the SEED (strand-exchange
4614 engineered domain) technology, said molecule comprising
4615 - an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said
4616 IL-18Ra-binding VHH has the amino acid sequence of SEQ ID NO: 90 ("VHH-SEED-
4617 AG-2") and
4618 - a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
4619 IL18RP-binding VHH has the amino acid sequence of SEQ ID NO: 100 ("VHH-SEED-
4620 GA-1").
4621 4622 Embodiment 617: A bispecific antibody molecule prepared by the SEED (strand-exchange
4623 engineered domain) technology, said molecule comprising
4624 - an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said
4625 IL-18Ra-binding VHH has the amino acid sequence of SEQ ID NO: 90 ("VHH-SEED-
4626 AG-2") and
4627 - a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
4628 IL18RP-binding VHH has the amino acid sequence of SEQ ID NO: 101 ("VHH-SEED-
4629 GA-2").
4630
4631 Embodiment 618: A bispecific antibody molecule prepared by the SEED (strand-exchange
4632 engineered domain) technology, said molecule comprising
4633 - an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said
4634 IL-18Ra-binding VHH has the amino acid sequence of SEQ ID NO: 90 ("VHH-SEED-
4635 AG-2") and
4636 - a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
4637 IL18RP-binding VHH has the amino acid sequence of SEQ ID NO: 103 ("VHH-SEED-
4638 GA-4").
4639
4640 Embodiment 619: A bispecific antibody molecule prepared by the SEED (strand-exchange
4641 engineered domain) technology, said molecule comprising
4642 - an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said
4643 IL-18Ra-binding VHH has the amino acid sequence of SEQ ID NO: 90 ("VHH-SEED-
4644 AG-2") and
4645 - a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
4646 IL18RP-binding VHH has the amino acid sequence of SEQ ID NO: 105 ("VHH-SEED-
4647 GA-6").
4648
4649 Embodiment 620: A bispecific antibody molecule prepared by the SEED (strand-exchange
4650 engineered domain) technology, said molecule comprising
4651 - an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said
4652 IL-18Ra-binding VHH has the amino acid sequence of SEQ ID NO: 90 ("VHH-SEED-
4653 AG-2") and 4654 - a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
4655 IL18RP-binding VHH has the amino acid sequence of SEQ ID NO: 106 ("VHH-SEED-
4656 GA-7").
4657
4658 Embodiment 621 : A bispecific antibody molecule prepared by the SEED (strand-exchange
4659 engineered domain) technology, said molecule comprising
4660 - an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said
4661 IL-18Ra-binding VHH has the amino acid sequence of SEQ ID NO: 90 ("VHH-SEED-
4662 AG-2") and
4663 - a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
4664 IL18RP-binding VHH has the amino acid sequence of SEQ ID NO: 108 ("VHH-SEED-
4665 GA-9").
4666
4667 Embodiment 622: A bispecific antibody molecule prepared by the SEED (strand-exchange
4668 engineered domain) technology, said molecule comprising
4669 - an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said
4670 IL-18Ra-binding VHH has the amino acid sequence of SEQ ID NO: 90 ("VHH-SEED-
4671 AG-2") and
4672 - a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
4673 IL18RP-binding VHH has the amino acid sequence of SEQ ID NO: 109 ("VHH-SEED-
4674 GA-10").
4675
4676 Embodiment 623: A bispecific antibody molecule prepared by the SEED (strand-exchange
4677 engineered domain) technology, said molecule comprising
4678 - an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said
4679 IL-18Ra-binding VHH has the amino acid sequence of SEQ ID NO: 93 ("VHH-SEED-
4680 AG-5") and
4681 - a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
4682 IL18RP-binding VHH has the amino acid sequence of SEQ ID NO: 101 ("VHH-SEED-
4683 GA-2").
4684
4685 Embodiment 624: A bispecific antibody molecule prepared by the SEED (strand-exchange
4686 engineered domain) technology, said molecule comprising 4687 - an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said
4688 IL-18Ra-binding VHH has the amino acid sequence of SEQ ID NO: 93 ("VHH-SEED-
4689 AG-5") and
4690 - a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
4691 IL18RP-binding VHH has the amino acid sequence of SEQ ID NO: 102 ("VHH-SEED-
4692 GA-3").
4693
4694 Embodiment 625: A bispecific antibody molecule prepared by the SEED (strand-exchange
4695 engineered domain) technology, said molecule comprising
4696 - an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said
4697 IL-18Ra-binding VHH has the amino acid sequence of SEQ ID NO: 94 ("VHH-SEED-
4698 AG-6") and
4699 - a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
4700 IL18RP-binding VHH has the amino acid sequence of SEQ ID NO: 105 ("VHH-SEED-
4701 GA-6").
4702
4703 Embodiment 626: A bispecific antibody molecule prepared by the SEED (strand-exchange
4704 engineered domain) technology, said molecule comprising
4705 - an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said
4706 IL-18Ra-binding VHH has the amino acid sequence of SEQ ID NO: 94 ("VHH-SEED-
4707 AG-6") and
4708 - a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
4709 IL18RP-binding VHH has the amino acid sequence of SEQ ID NO: 108 ("VHH-SEED-
4710 GA-9").
4711
4712 Embodiment 627: A bispecific antibody molecule prepared by the SEED (strand-exchange
4713 engineered domain) technology, said molecule comprising
4714 - an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said
4715 IL-18Ra-binding VHH has the amino acid sequence of SEQ ID NO: 94 ("VHH-SEED-
4716 AG-6") and
4717 - a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
4718 IL18RP-binding VHH has the amino acid sequence of SEQ ID NO: 109 ("VHH-SEED-
4719 GA-10").
4720 4721 Embodiment 628: A bispecific antibody molecule prepared by the SEED (strand-exchange
4722 engineered domain) technology, said molecule comprising
4723 - an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said
4724 IL-18Ra-binding VHH has the amino acid sequence of SEQ ID NO: 94 ("VHH-SEED-
4725 AG-6") and
4726 - a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
4727 IL18RP-binding VHH has the amino acid sequence of SEQ ID NO: 110 ("VHH-SEED-
4728 GA-11").
4729
4730 Embodiment 629: A bispecific antibody molecule prepared by the SEED (strand-exchange
4731 engineered domain) technology, said molecule comprising
4732 - an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said
4733 IL-18Ra-binding VHH has the amino acid sequence of SEQ ID NO: 96 ("VHH-SEED-
4734 AG-8") and
4735 - a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
4736 IL18RP-binding VHH has the amino acid sequence of SEQ ID NO: 100 ("VHH-SEED-
4737 GA-1").
4738
4739 Embodiment 630: A bispecific antibody molecule prepared by the SEED (strand-exchange
4740 engineered domain) technology, said molecule comprising
4741 - an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said
4742 IL-18Ra-binding VHH has the amino acid sequence of SEQ ID NO: 96 ("VHH-SEED-
4743 AG-8") and
4744 - a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
4745 IL18RP-binding VHH has the amino acid sequence of SEQ ID NO: 101 ("VHH-SEED-
4746 GA-2").
4747
4748 Embodiment 631 : A bispecific antibody molecule prepared by the SEED (strand-exchange
4749 engineered domain) technology, said molecule comprising
4750 - an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said
4751 IL-18Ra-binding VHH has the amino acid sequence of SEQ ID NO: 96 ("VHH-SEED-
4752 AG-8") and 4753 - a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
4754 IL18RP-binding VHH has the amino acid sequence of SEQ ID NO: 105 ("VHH-SEED-
4755 GA-6").
4756
4757 Embodiment 632: A bispecific antibody molecule prepared by the SEED (strand-exchange
4758 engineered domain) technology, said molecule comprising
4759 - an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said
4760 IL-18Ra-binding VHH has the amino acid sequence of SEQ ID NO: 96 ("VHH-SEED-
4761 AG-8") and
4762 - a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
4763 IL18RP-binding VHH has the amino acid sequence of SEQ ID NO: 106 ("VHH-SEED-
4764 GA-7").
4765
4766 Embodiment 633: A bispecific antibody molecule prepared by the SEED (strand-exchange
4767 engineered domain) technology, said molecule comprising
4768 - an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said
4769 IL-18Ra-binding VHH has the amino acid sequence of SEQ ID NO: 96 ("VHH-SEED-
4770 AG-8") and
4771 - a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
4772 IL18RP-binding VHH has the amino acid sequence of SEQ ID NO: 108 ("VHH-SEED-
4773 GA-9").
4774
4775 Embodiment 634: A bispecific antibody molecule prepared by the SEED (strand-exchange
4776 engineered domain) technology, said molecule comprising
4777 - an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said
4778 IL-18Ra-binding VHH has the amino acid sequence of SEQ ID NO: 96 ("VHH-SEED-
4779 AG-8") and
4780 - a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
4781 IL18RP-binding VHH has the amino acid sequence of SEQ ID NO: 109 ("VHH-SEED-
4782 GA-10").
4783
4784 Embodiment 635: A bispecific antibody molecule prepared by the SEED (strand-exchange
4785 engineered domain) technology, said molecule comprising 4786 - an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said
4787 IL-18Ra-binding VHH has the amino acid sequence of SEQ ID NO: 97 ("VHH-SEED-
4788 AG-9") and
4789 - a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
4790 IL18RP-binding VHH has the amino acid sequence of SEQ ID NO: 100 ("VHH-SEED-
4791 GA-1").
4792
4793 Embodiment 636: A bispecific antibody molecule prepared by the SEED (strand-exchange
4794 engineered domain) technology, said molecule comprising
4795 - an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said
4796 IL-18Ra-binding VHH has the amino acid sequence of SEQ ID NO: 97 ("VHH-SEED-
4797 AG-9") and
4798 - a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
4799 IL18RP-binding VHH has the amino acid sequence of SEQ ID NO: 101 ("VHH-SEED-
4800 GA-2").
4801
4802 Embodiment 637: A bispecific antibody molecule prepared by the SEED (strand-exchange
4803 engineered domain) technology, said molecule comprising
4804 - an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said
4805 IL-18Ra-binding VHH has the amino acid sequence of SEQ ID NO: 97 ("VHH-SEED-
4806 AG-9") and
4807 - a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
4808 IL18RP-binding VHH has the amino acid sequence of SEQ ID NO: 103 ("VHH-SEED-
4809 GA-4").
4810
4811 Embodiment 638: A bispecific antibody molecule prepared by the SEED (strand-exchange
4812 engineered domain) technology, said molecule comprising
4813 - an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said
4814 IL-18Ra-binding VHH has the amino acid sequence of SEQ ID NO: 97 ("VHH-SEED-
4815 AG-9") and
4816 - a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
4817 IL18RP-binding VHH has the amino acid sequence of SEQ ID NO: 105 ("VHH-SEED-
4818 GA-6").
4819 4820 Embodiment 639: A bispecific antibody molecule prepared by the SEED (strand-exchange
4821 engineered domain) technology, said molecule comprising
4822 - an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said
4823 IL-18Ra-binding VHH has the amino acid sequence of SEQ ID NO: 97 ("VHH-SEED-
4824 AG-9") and
4825 - a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
4826 IL18RP-binding VHH has the amino acid sequence of SEQ ID NO: 108 ("VHH-SEED-
4827 GA-9").
4828
4829 Embodiment 640: A bispecific antibody molecule prepared by the SEED (strand-exchange
4830 engineered domain) technology, said molecule comprising
4831 - an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said
4832 IL-18Ra-binding VHH has the amino acid sequence of SEQ ID NO: 97 ("VHH-SEED-
4833 AG-9") and
4834 - a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
4835 IL18RP-binding VHH has the amino acid sequence of SEQ ID NO: 109 ("VHH-SEED-
4836 GA-10").
4837
4838 Embodiment 641 : A bispecific antibody molecule prepared by the SEED (strand-exchange
4839 engineered domain) technology, said molecule comprising
4840 - an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said
4841 IL-18Ra-binding VHH has the amino acid sequence of SEQ ID NO: 97 ("VHH-SEED-
4842 AG-9") and
4843 - a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
4844 IL18RP-binding VHH has the amino acid sequence of SEQ ID NO: 110 ("VHH-SEED-
4845 GA-11").
4846
4847 Embodiment 642: A bispecific antibody molecule prepared by the SEED (strand-exchange
4848 engineered domain) technology, said molecule comprising
4849 - an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said
4850 IL-18Ra-binding VHH has the amino acid sequence of SEQ ID NO: 98 ("VHH-SEED-
4851 AG-10") and 4852 - a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
4853 IL18RP-binding VHH has the amino acid sequence of SEQ ID NO: 101 ("VHH-SEED-
4854 GA-2").
4855
4856 Embodiment 643: A bispecific antibody molecule prepared by the SEED (strand-exchange
4857 engineered domain) technology, said molecule comprising
4858 - an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said
4859 IL-18Ra-binding VHH has the amino acid sequence of SEQ ID NO: 98 ("VHH-SEED-
4860 AG-10") and
4861 - a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
4862 IL18RP-binding VHH has the amino acid sequence of SEQ ID NO: 108 ("VHH-SEED-
4863 GA-9").
4864
4865 Embodiment 644: A bispecific antibody molecule prepared by the SEED (strand-exchange
4866 engineered domain) technology, said molecule comprising
4867 - an AG chain linked to an IL-18Ra-binding VHH, wherein said AG chain linked to said
4868 IL-18Ra-binding VHH has the amino acid sequence of SEQ ID NO: 98 ("VHH-SEED-
4869 AG-10") and
4870 - a GA chain linked to an IL18RP-binding VHH, wherein said GA chain linked to said
4871 IL18RP-binding VHH has the amino acid sequence of SEQ ID NO: 109 ("VHH-SEED-
4872 GA-10").
4873
4874 According to a fourteenth aspect, the present disclosure relates to a pharmaceutical composition
4875 comprising the compound or bispecific antibody molecule according to any one of the aspects
4876 or embodiments described above.
4877
4878 Methods for preparing pharmaceutical compositions are known to a skilled person in the art
4879 (Remington: The Science and Practice of Pharmacy, 22nd ed. (2012), Pharmaceutical Press).
4880
4881 In some embodiments, said pharmaceutical composition comprises a pharmaceutically
4882 acceptable carrier, diluent and/or excipient.
4883
4884 The term "pharmaceutically acceptable" designates that said carrier, diluent or excipient is a
4885 non-toxic, inert material that is compatible with the other ingredients of the pharmaceutical 4886 composition and not harmful to the patient that the pharmaceutical composition is administered
4887 to, such that it can be used in a pharmaceutical product. Substances suitable as carriers, diluents
4888 or excipients in pharmaceutical compositions are known to a skilled person in the art
4889 (Remington: The Science and Practice of Pharmacy, 22nd ed. (2012), Pharmaceutical Press).
4890 The pharmaceutical composition may further include e.g. additional adjuvants, antioxidants,
4891 buffering agents, bulking agents, colorants, emulsifiers, fillers, flavoring agents, preservatives,
4892 stabilizers, suspending agents and/or other customary pharmaceutical auxiliaries.
4893
4894 According to a fifteenth aspect, the present disclosure relates to the use of a compound or
4895 bispecific antibody molecule according to any one of the aspects or embodiments described
4896 above for activating IL-18R receptor.
4897
4898 According to a sixteenth aspect, the present disclosure relates to the use of a compound or
4899 bispecific antibody molecule according to any one of the aspects or embodiments described
4900 above for inducing IL-y release from cells carrying an IL-18R receptor.
4901
4902 Preferably, said use occurs in the presence of IL-12.
4903
4904 Preferably, said cells carrying an IL-18R receptor are T cells.
4905
4906 Preferably, said cells carrying an IL-18R receptor are Thl T cells.
4907
4908
4909 EXAMPLES
4910
4911 The following examples describe the preparation and characterization of IL18 mimetics as
4912 disclosed in the present disclosure, as well as related compounds and methods, along with
4913 comparative disclosure. It is understood that various embodiments of the disclosure reflected
4914 in the examples may be practiced, given the general description provided above. Although the
4915 foregoing invention has been described in some detail by way of illustration and example for
4916 purposes of clarity of understanding, the description and examples should not be construed as
4917 limiting the scope of the invention.
4918
4919 Example 1 4920 Camelid immunization
4921 For the immunization procedure, one llama (lama glama) with an age of about 12.5 years and
4922 one male huarizo (lama glama x vicugna pacos) of about 11 years of age were immunized with
4923 a cocktail of recombinant human (rh) IL18Ra extracellular domain (ECD) as Fc-fusion (R&D
4924 Systems) as well as rh IL18RP ECD (Sino Biologies) with a poly histidine-tag. For
4925 administration, the antigens were diluted to a stock concentration of 1 mg/mL in PBS and
4926 emulsified for initial immunization with Complete Freund's Adjuvant or with Incomplete
4927 Freund's Adjuvant for subsequent immunizations. The antigens were injected subcutaneously
4928 at three sites with 200 pg material in total (1 : 1 ratio of IL18Ra and ILR18P). This procedure
4929 was conducted four times over a period of 35 days, i.e., administration at dO, dl4, d24 and d35.
4930 One week after final administration (d42), a volume of 150 ml blood was collected from each
4931 specimen for subsequent RNA extraction and cDNA synthesis. Of note, processes involving
4932 animals were performed at preclinics GmbH, Germany and in accordance with local regulations
4933 and animal welfare protection laws, hence immunized animals remained alive after final blood
4934 collection.
4935
4936 Yeast strains and media
4937 For antibody surface display, the yeast Saccharomyces cerevisiae strain EBY100 (MAT a
4938 URA3-52 trpl leu2Al his3A200 pep4::HIS3 prblA1.6R canl GAL (pIU211:URA3)) (Thermo
4939 Fisher Scientific) was employed. The cells were cultivated in yeast extract-peptone-dextrose
4940 (YPD) medium composed of 10 g/L yeast extract, 20 g/L peptone and 20 g/L dextrose,
4941 additionally supplemented with 10 mg/mL penicillin-streptomycin (Gibco). Cells harboring
4942 the library plasmids (pDisp) after gap repair cloning were cultivated in minimal synthetic
4943 defined (SD)-base (Takara Bio) medium supplemented with 5.4 g/L Na2HPO4 and 8.6 g/L
4944 NaH2PO4 H2O, also comprising the corresponding dropout mix (Takara Bio) composed of all
4945 essential amino acids except for tryptophan (-Trp) for selection. To induce antibody gene
4946 expression, dextrose was replaced by galactose as carbon source, thus cells were transferred
4947 into SG dropout medium (-Trp) consisting of SG-base medium (Takara Bio) and 10% (w/v)
4948 polyethylene glycol 8000 (PEG 8000).
4949
4950 Plasmids for yeast surface display and library generation 4951 Homologous recombination-based cloning, referred to as gap repair cloning, was utilized for
4952 the generation of the VHH libraries in yeast. For this, our group already described the specific
4953 PCR amplification of VHH fragments as well as library construction detailed elsewhere (Roth
4954 et al., 2020). In short, digestion of a stuffer sequence in the pDisp with specific restriction
4955 enzyme Bsal allow for the subsequent genetic fusion of VHH library candidates in frame to
4956 Aga2p by gap repair cloning, ultimately enabling the sdAb presentation on the surface of the
4957 yeast cell. Additionally, monitoring of proper full-length VHH presentation on yeast surface
4958 was realized by a HA epitope C-terminally linked to Aga2p on the pDisp backbone.
4959
4960 Library sorting
4961 EBY100 cells were grown overnight in SD medium with dropout mix lacking tryptophan (-
4962 Trp) at 30 °C and 120 rpm. Next day, cells were transferred into SG medium with dropout mix
4963 (-Trp) at 107 cells/mL to induce VHH surface expression and incubated for another 48 h at 20
4964 °C and 120 rpm. The fluorescence activated cell sorting (FACS) procedures were conducted on
4965 a BD FACSAria™ Fusion cell sorter (BD Biosciences) device. For library sorting purposes,
4966 full-length VHH surface expression was monitored by application of an Alexa Fluor 488
4967 labeled mouse monoclonal anti-HA antibody (R&D Systems, diluted 1 :20). A two-dimensional
4968 sorting strategy was enabled by simultaneous antigen binding detection using indirect
4969 immunofluorescence staining with 250 nM rh his-tagged IL18Ra (Sino Biological) or 250 nM
4970 rh his-tagged ILR18RP ECD (Sino Biological) in combination with murine anti -his detection
4971 antibody (Penta His Alexa Fluor 647 Conjugate, Qiagen, diluted 1 :20, for sorting round I or
4972 Allophycocyanin anti-His Tag Antibody, BioLegend, diluted 1 :20, for sorting round II),
4973 respectively (Fig. IB). Control samples of cells incubated with secondary labeling reagents and
4974 an unrelated antigen or cells incubated with secondary labeling only as well as untreated cells
4975 were employed in every FACS analysis, enabling an adequate gate adjustment for the desired
4976 cell population.
4977
4978 Protein Expression, Purification and Analytics
4979 After clone selection based on sequencing results obtained from FACS enriched populations,
4980 the VHH variants directed against IL18Ra ECD were N-terminally fused to the hinge region of
4981 Fc immune effector-silenced (eff-) SEED AG chains, while the VHHs targeting IL18RP ECD
4982 were fused accordingly to eff- SEED GA chains prior to cloning into pTT5 mammalian 4983 expression vector (Durocher, 2002), ultimately enabling the production of eff- monospecific
4984 (IL18R_msVHH) and bispecific SEEDbodies (1+1 IL18R_VHHaP). For small-scale
4985 production of the proteins (25 mL scale), Expi293 cells were transiently transfected with
4986 respective pTT5 vectors according to the manufacturer's instructions (Thermo Fisher
4987 Scientific). Six days post transfection the protein containing supernatants were harvested by
4988 centrifugation prior purification via Mab Select antibody purification chromatography resin (GE
4989 Healthcare). A buffer exchange step to PBS pH 6.8 overnight using Pur-A-Lyzer™ Maxi 3500
4990 Dialysis Kit (Sigma Aldrich) was employed, followed by sterile filtration with Ultrafree®-CL
4991 GV 0.22 pm centrifugal devices (Merck Millipore) and measurement of resulting molecule
4992 concentrations using Nanodrop ND-1000 (Peqlab). Protein purities were afterwards determined
4993 by analytical size exclusion chromatography (SEC) on a TSKgel UP-SW3000 column (2 pm,
4994 4.6 x 300 mm, Tosoh Bioscience) using an Agilent HPLC 1260 Infinity system. 7.5 pg protein
4995 per sample were injected and run at a flow rate of 0.35 ml/min using 50 mM sodium phosphate,
4996 0.4 M NaC104 pH 6.3 as mobile phase.
4997
4998 Bispecific proteins generated for the assessment of antibody format engineering on IL-18
4999 cytokine mimetics (Fig. 4A) were generated by the replacement of VH and VL+ of an effector
5000 silenced IgG by VHHa and VHHp, respectively, thereby facilitating the generation of the
5001 IL18R_sdIgGaP architecture (2+2). Tandem arrangement of the respective VHHs was achieved
5002 by N-terminal fusion to the hinge region of an effector silenced IgGl Fc fragment, whereby the
5003 VHHs were separated by a five amino acid Gly4Ser linker, consequently leading to the (2+2)
5004 IL18R_tanVHHaP design (2+2). Moreover, tandem arrangement was constructed for both
5005 VHH orientations, i.e., aP and Pa. Of note, all four molecules were also produced harboring the
5006 E430G mutation for on-target hexamerization.
5007
5008 These antibodies were transiently expressed from ExpiCHO cells (Thermo Fisher Scientific)
5009 following a 11-day protocol at 250 mL scale according to the manufacturer’s instructions (Max
5010 Titer Protocol). The cultivation protocol included a temperature shift from 36.5 °C to 32.0 °C
5011 after addition of ExpiFectamine CHO Enhancer and first ExpiCHO Feed at day 1 while
5012 incubating at 5 % CO2 and 80 rpm. Plasmids for transfections (pTT5 backbone) were used at
5013 0.8 mg/L and were mixed 1 : 1 HC:LC (IgGs) or 2: 1 AG:GA (SEEDs) for constructs composed
5014 of multiple antibody chains. Antibody containing supernatants were harvested by centrifugation
5015 at 4000 x g for 20 min at 4°C and afterwards sterile filtered. Protein purification was done by
5016 affinity capture on Protein A resin (HiTrap MabSelect SuRe, 5 ml) and acidic elution with 50 5017 mM acetic acid pH 3.0 at 5 ml/min using an GE Healthcare AKTAxpress system followed by
5018 a desalting step at 10 ml/min (HiPrep 26/10 columns) into PBS pH 6.8. Protein purities were
5019 afterwards determined by analytical SEC on a TSKgel UP-SW3000 column (2 pm, 4.6 x 300
5020 mm, Tosoh Bioscience) using an Agilent HPLC 1260 Infinity system. 7.5 pg protein per sample
5021 were injected and run at a flow rate of 0.35 ml/min using 50 mM sodium phosphate, 0.4 M
5022 NaClO4 pH 6.3 as mobile phase. For proteins with purities below 90%, a polishing step by
5023 preparative SEC (HiLoad 26/600 or 16/600 Superdex 200 pg) was applied. Final samples were
5024 sterile filtered over 0.2 pm, flash frozen in liquid nitrogen and stored at -80°C until further use.
5025 To assure no quality loss after freeze/thaw, a final purity determination by analytical SEC was
5026 done. Furthermore, thermal unfolding of the antibodies was assessed by differential scanning
5027 fluorimetry (DSF) on a Prometheus NT.PLEX nanoDSF instrument (NanoTemper). Samples
5028 were measured in duplicates using nanoDSF Standard Capillary Chips. A temperature gradient
5029 from 20°C to 95°C at a slope of l°C/min was used while recording fluorescence at 350 and 330
5030 nm. Unfolding transition midpoints (Tm) were determined from the first derivative of the
5031 fluorescence ratio 350 nm/330 nm.
5032
5033 Biolayer interferometry
5034 For binding assays, kinetic measurements, competition assays as well as simultaneous binding
5035 with recombinant proteins, the Octet RED96 system (ForteBio, Pall Life Science) was
5036 employed using 25 °C and 1000 rpm agitation settings. In order to determine binding kinetics
5037 of monospecific molecules, human IL18Ra-His (Sino Biological) and human IL18RP-His
5038 (Sino Biological) were loaded on anti-Penta His (EHS1K) biosensors at 3 pg/mL in PBS for 180
5039 s followed by 60 s sensor rinsing in kinetics buffer (KB; PBS + 0.1% Tween-20 and 1% bovine
5040 serum albumin, BSA). Afterwards, binding to monospecific molecules at 100 nM in KB was
5041 measured for 300 s followed by dissociation for 100 s in KB. In each experiment, one negative
5042 control using irrelevant antibody and a second reference by incubating the IL-18R subunits in
5043 KB instead of the monospecific molecules was measured. Kinetic constants (KD) of bispecific
5044 molecules to determine affinities were measured by loading bispecific molecules on anti-human
5045 Fc (AHC) biosensors for 180s at 5 pg/mL in PBS. After sensor rinsing in KB for 45 s,
5046 interaction was tested by association of human IL18Ra-His or human IL18RP-His in decreasing
5047 concentrations from 100 nM to 12.5 nM for top four molecules and 100 nM to 11 nM for
5048 engineered constructs in KB for 180 s, followed by dissociation for 300 s in KB. Avidity effects
5049 of engineered tandem constructs were shown loading human IL18Ra-His and human IL18RP- 5050 His on HIS IK biosensors at 5 pg/mL in PBS for 180 s, followed by 45 s sensor rinsing in KB.
5051 Association of engineered tandem constructs as well as parental molecule was measured in
5052 ranging concentrations from 100 nM to 11 nM for 180 s in KB followed by dissociation for
5053 300s in KB. Simultaneous binding capacities of IL18R subunits for engineered tandem
5054 constructs and parental molecule were measured by loading molecules on AHC biosensors for
5055 180 s at 5 pg/mL in PBS. After sensor rinsing a first binding step was performed using human
5056 IL18Ra-His or human IL18RP-His at 200 nM to saturate the binding capacity of the loaded
5057 molecule for 300 s. Afterward, the association was determined against other IL18R subunit for
5058 180 s using varying concentrations from 100 nM to 11 nM. To avoid a dissociation of first
5059 bound IL18R subunit in this step, 100 nM of first bound subunit was used for every
5060 concentration tested in association. For the following dissociation step (300 s), first bound
5061 subunit was also used at 100 nM to assess dissociation against second IL18R subunit only. To
5062 determine KD of human IL-18 (R&D Systems) on human IL-18BP His (Aero
5063 Biosytems)/human IL-18BP Fc Tag (R&D Systems) was loaded on HIS IK/ AHC biosensors at
5064 5 pg/mL in PBS for 180 s. After sensor rinsing in KB for 45 s, association of human IL- 18 was
5065 measured in decreasing concentrations from 10 nM to 0.3125 nM in KB for 180 s. Dissociation
5066 of human IL-18 was measured in KB for 300 s. Parallel control measurements for each
5067 association step of biosensors incubated in KB instead were utilized. Data were fitted and
5068 analyzed with ForteBio data analysis software 8.0 using a 1 : 1 binding model after Savitzky-
5069 Golay filtering. Epitope binning experiment of top 4 molecules on IL18R subunits were
5070 performed by loading human IL18Ra-His or human IL18RP-His on HIS IK biosensors at 5
5071 pg/mL in PBS for 180s, followed by 45 s sensor rinsing in KB. Binding to first bispecific
5072 molecule at 200 nM in KB was measured for 300 s to saturate binding capacities of loaded
5073 IL18R subunit, followed by a second association step of another bispecific molecule at 200nM
5074 in KB for another 180 s. To avoid a dissociation of first bound bispecific molecule in second
5075 association, 100 nM of first bound bispecific molecule was used for every association of second
5076 bispecific molecule. To analyze competitive binding of top 4 molecules and engineered tandem
5077 constructs vs. human IL-18 on human IL18Ra-His, molecules were loaded at 5 pg/mL in PBS
5078 for 180 s on AHC biosensors, followed by 45 s sensor rinsing in KB. Association of the
5079 molecules at 200 nM for 300 s in KB was followed by an additional association step with human
5080 IL- 18 at 100 nM for another 180 s in KB. Control values using an unrelated antibody as well
5081 as controls using KB buffer were included. To illustrate that our top 4 molecules and engineered
5082 tandem molecules are not affected by human IL-18BP His, molecules were loaded on AHC
5083 biosensors at 5 pg/mL for 180 s in PBS. After a rinsing step in KB for 45 s, human IL-18BP 5084 His was associated at 1000 nM for 180 s and dissociated in KB for 180 s. To show binding of
5085 human IL-18 to human IL-18BP, human IL-18BP His was loaded at 5 pg/mL in PBS for 180 s
5086 on HIS IK biosensors, followed by a rinsing step in KB for 45 s. Binding to human IL-18 at
5087 1000 nM in KB was measured for 180 s followed by dissociation for 180 s in KB.
5088
5089 Human IL-18 HEK reporter assay
5090 For detection of the activation of JAK-STAT pathway by bispecific IL18R_VHHaP
5091 SEEDbodies the IL-18 HEK-Blue assay (InvivoGen, hkb-hmill8) was performed according to
5092 the manufacturer’s instructions. In brief, 5^ 104 cells were seeded into each well of a 96-well
5093 plate and stimulated initially with 50 nM of selected IL18R_VHHaP for 24 hours at 37 °C and
5094 5 % CO2 including incubation with TNF-a and IL-18 as controls. For EC50 determination,
5095 samples were titrated with 1 :5 serial dilution with concentrations ranging from 100 nM to
5096 5.12x10-5 nM. Additionally, an IL-18 titration was performed with 1 :5 serial dilution with
5097 concentrations ranging from 100 nM to 5.24x10-12 nM. Twenty microliters of cell culture
5098 supernatant were then taken from each well and mixed with 180 pl QUANTLBlue medium in
5099 a 96-well plate, incubated for 3 h at 37 °C and 5 % CO2, and then read in a microplate reader
5100 at 640 nm.
5101
5102 IFN-y release assay
5103 For functional assays to measure IFN-y release, freshly isolated human peripheral mononuclear
5104 cells (PBMCs) from healthy donors were used. Isolation of PBMCs from whole blood samples
5105 was performed using SepMate-50 tubes (StemCell Technologies) and Lymphoprep medium
5106 (StemCell Technologies) according to StemCell Technologies’ SepMate PBMC Isolation
5107 protocol (2019). Human PBMCs were used directly for functional assays after isolation and
5108 cultivated in AIM V medium (Gibco) at 37°C and 5% CO2 in a humidity box for 24 h during
5109 functional assays. For initial Cytokine Release Assay of top 16 molecules 1x106 human
5110 PBMCs per well were stimulated with bispecific molecules (100 nM) or human IL-18 (1 nM,
5111 R&D Systems) in AIM V medium in 96-well white-opaque cultivation plates (Perkin&Elmer).
5112 All stimulations were performed once in the presence of human IL- 12 (10 ng/mL, R&D
5113 Systems) and once in the absence of human IL-12. To determine EC50 values of top 4
5114 molecules 1x106 human PBMCs per well were stimulated with a range of 1000 nM to 0.122
5115 nM of bi specific molecules and human IL-12 (10 ng/mL). For first functional test of engineered 5116 constructs based on parental molecule IL18R_VHHa2pi5 1x106 human PBMCs per well were
5117 stimulated with two concentrations of 10 nM and 1 nM for engineered constructs and 1 nM/0.1
5118 nM for human IL-18. All stimulations were performed in the presence of human IL- 12 (10
5119 ng/ml). To determine EC50 values of top engineered constructs 1x106 human PBMCs were
5120 stimulated with ranging concentrations of engineered constructs (1000 nM to 0.000209 nM)
5121 and IL-18 (0.457 nM to 0.000209 nM) as well as human IL-12 (10 ng/ml). For human IL-18BP
5122 Assay 1x106 human PBMCs were stimulated with a fixed concentration of IL-18 (0.5 nM) or
5123 engineered tandem constructs (0.5 nM) and range of IL-18BP concentrations (0.00001 nM to
5124 100 nM). All stimulations were performed in the presence of human IL-12 (10 ng/ml). As
5125 controls for every functional assay a non-functional binder that serves as negative control as
5126 well as human PBMCs only stimulated with human IL-12 as basal stimulation reference were
5127 used. Quantification of IFN-y released by human PBMCs was performed using human cytokine
5128 HTRF kits (Cisbio) as previously described by our group (Pekar et al., 2020). After 24 h
5129 incubation, PBMC cells were sedimented in 96-well plates by centrifugation, and cytokine¬
5130 containing supernatants were further processed according to the manufacturer’s instructions.
5131 Assay plates were measured with a PHERAstar FSX device (BMG Labtech). HTRF optical
5132 entity using excitation at 337 nm and emission at 620 nm as well as 665 nm was used. Analyses
5133 and fitting of resulting data were facilitated by MARS software (v3.32, BMG) enabling a four-
5134 parameter logistic (4PL l/y2) model fitting of the standard curve following the kit
5135 manufacturer’s instructions.
5136
5137 Data processing and statistical analysis
5138 Graphical and statistical analyses were conducted with GraphPad Prism 8 software. P-values
5139 were calculated utilizing repeated measures 2way ANOVA and the Bonferroni as
5140 recommended, p < 0.05 were regarded as statistically significant.
5141
5142 Example 2
5143 sdAbs targeting IL-18Ra and IL-18RP
5144 For the isolation of VHHs targeting IL-18Ra and IL-18RP one llama and one huarizo (llama x
5145 alpaca) were immunized with a cocktail of the extracellular domains (ECDs) of both receptor
5146 subunits. Afterwards, for each specimen a YSD library was generated as described previously
5147 (Roth et al., 2020; Klausz et al., 2022) and both libraries were sorted individually. A two- 5148 dimensional sorting strategy was applied to select for full-length VHH display via HA tag
5149 staining simultaneous to the binding functionality by exploiting an antigen concentration of
5150 250 nM for each respective receptor subunit. In the first round of selection, a mixture of both
5151 receptor subunits was utilized (Fig. IB). In the second selection round the enriched libraries
5152 were selected against both antigens separately and for each library and each receptor subunit
5153 enrichment for an antigen-binding population could be achieved (Fig. IB, Fig. 5). From each
5154 library, 96 clones were sent out for sequencing for each antigen. This resulted in 55 unique
5155 clones in total enriched for binding to IL-18Ra and 101 unique clones for IL- 18RP, respectively
5156 (Fig. 1C). By applying a clonotyping strategy based on CDR3 diversity, eleven VHHs targeting
5157 each receptor subunit, respectively, were selected for expression.
5158
5159 To this end, all 22 sdAbs were expressed as one-armed (1+0) antibodies by employing the
5160 SEED technology which relies on beta-strand exchanges of IgG and IgA CH3 constant
5161 domains, resulting in preferential heavy chain heterodimerization (Fig. 6A) (Davis et al., 2010).
5162 sdAbs enriched for IL-18Ra binding were grafted onto the hinge region of the AG chain of the
5163 SEEDbody and produced with a paratope-less GA chain, while sdAbs targeting IL-18RP were
5164 fused to the GA chain and combined with a non-targeted AG chain. An effector silenced
5165 derivative of the SEEDbody Fc region was exploited in order to abolish the potential of
5166 antibody-dependent cell-mediated cytotoxicity (ADCC) in primary cell assays (and to verify
5167 that abolishment of ADCC by such an approach also functions in this antibody set-up).
5168
5169 Following expression in ExpiCHO™ cells and protein A purification, we assessed binding to
5170 the ECDs of IL-18Ra and IL-18RP by biolayer interferometry (BLI) using an antigen
5171 concentration of 100 nM (Fig. 6B).
5172
5173 As expected, (given the low sequence identity of approximately 21% between IL-18Ra ECD
5174 and IL-18RP ECD), monospecific molecules obtained from the IL-18Ra sorts
5175 (ms_IL18R_VHHal-l 1) only showed binding to IL-18Ra ECD but not to IL-18RP ECD which
5176 was vice versa for monospecific clones selected from the IL-18RP enrichments
5177 (ms_IL18R_VHHpi2-22). In addition to this, ms_IL18R_VHHa7 only displayed negligible
5178 binding to IL-18Ra ECD, whereas IL-18RP-directed paratope ms_IL18R_VHHpi9 exhibited
5179 no binding at all. Consequently, both sdAbs were excluded from further consideration.
5180 5181 Thus, ten sdAbs specific for IL-18Ra (VHH1, VHH2, VHH3, VHH4, VHH5, VHH6, VHH8,
5182 VHH9, VHH10, VHH11) and ten sdAbs specific for IL-18RP (VHH12, VHH13, VHH14,
5183 VHH15, VHH16, VHH17, VHH18, VHH20, VHH21, VHH22) were obtained.
5184
5185 Example 3
5186 Identification of IL-18 receptor agonists after combinatorial reformatting of sdAbs targeting
5187 individual IL-18 receptor subunits as (1+1) bsAbs
5188 For functional characterization, all ten VHHs targeting IL-18Ra (engrafted to the AG chain of
5189 the SEED architecture) as well as all ten sdAbs specific for IL-18RP (fused to the GA chain)
5190 were recombined and expressed as bispecific SEEDbodies, resulting in 100 bispecific sdAb-
5191 derived antibody derivatives.
5192
5193 As initial cut-off in terms of biophysical properties, we only considered bispecifics for further
5194 investigation that comprised more than 86% target peak in analytical size exclusion
5195 chromatography post protein A purification, resulting in twelve molecules that were excluded.
5196 Interestingly, this encompassed all bsAbs that harbored IL18R_VHHal 1, indicating liabilities
5197 of the respective sdAb paratope. Notwithstanding, 88 VHH-derived bsAbs were assessed
5198 regarding their agonistic potential exploiting IL-18 reporter cells, stably expressing IL-18Ra
5199 and IL-18RP (HEK-Blue™ IL-18 cells).
5200
5201 In an initial experiment, bsAbs as well as all monospecific SEEDbodies (either series
5202 ms_IL18R_VHHal-l 1 or ms_IL18R_VHHp 12-22) were used at a concentration of 50 nM.
5203 Recombinant human (rh) TNF-a was employed as negative control as well as (rh) IL- 18 as
5204 positive control, showing a dose-dependent activation of IL-18 reporter cells (Fig. 7A). As
5205 expected, none of the monospecific SEEDbodies was able to agonize IL-18 reporter cells,
5206 whereas 44 out of the 88 sdAb-based bispecifics induced NFKB activation that was at least 1.5-
5207 fold higher than for TNF-a at this fixed concentration (data not shown). These molecules were
5208 further characterized exploiting the reporter cell assay in a dose-dependent manner. To this end,
5209 we also included IL18R_VHHaipi6 which did not show agonism potential but specific binding
5210 to the respective receptor subunits as negative control (Fig. 2A). Intriguingly, all 44 different
5211 bispecifics were able to agonize the IL-18 reporter cells to a certain extent, whereas
5212 IL18R_VHHaipi6 did not induce activation, as exemplarily shown for surrogate agonists
5213 IL18R_VHHa2pi5, IL18R_VHHa8pi5, IL18R_VHHa2pi7 and IL18R_VHHa8pi7 in 5214 Figure 2A. However, compared with (rh) IL-18, potencies (EC50 of NFKB reporter activation)
5215 as well as the magnitude (maximal NFKB activation) were attenuated for all bispecifics tested
5216 (Fig. 7A, B). According to their agonism potential, all bispecifics were ranked into four groups:
5217 molecules discarded due to low purity (grey), functionally inactive bispecifics (red), minimally
5218 active agonists eliciting less than 50% of NFKB reporter activation normalized to (rh) IL-18 at
5219 1 nM or EC50 higher than 0.1 nM (yellow) and moderately active surrogate agonists triggering
5220 either a normalized NFKB reporter activation of more than 50% relative to IL 18 or displaying
5221 potencies of less than 0.1 nM (green, Fig. 2B).
5222
5223 Example 4
5224 Dose-dependent release of IFN-y by bispecific sdAb-derived IL-18 mimetics in PBMC-based
5225 assays
5226 To evaluate the functionality of the engineered bispecific cytokine mimetics in primary cell
5227 assays, we stimulated human peripheral blood mononuclear cells (PBMCs) either with (rh) IL-
5228 18 or with a selection of 16 different surrogate agonists that showed at least some level of
5229 agonistic activity in the IL-18 reporter cell assay (ranging from minimally active to moderately
5230 active agonists) in combination with low dose (rh) IL-12. Again, IL18R_VHHaipi6 was
5231 included as negative control. To this end, we exploited a fixed concentration of 100 nM of each
5232 of bsAbs scrutinized, whereas for (rh) IL-18 due to an anticipated much stronger potency, we
5233 used a concentration of 1 nM. As functional read out we used PBMC-derived production of
5234 IFN-y (Fig. 3A). Stimulation of PBMCs with (rh) IL-18 triggered a robust release of IFN-y
5235 (mean release at 1 nM of 2135.8 pg/ml), whereas IFN-y production was negligible for the
5236 treatment with IL18R_VHHaipi6 (mean release at 100 nM of 39.5 pg/ml). For the 16
5237 bispecific surrogate agonists we observed a quite diverse release of IFN-y at 100 nM. While for
5238 five bsAbs (IL18R_VHHa5pi3, IL18R_VHHa2p22, IL18R_VHHa6p22, IL18R_VHHa8p22,
5239 IL18R_VHHal0p22), the magnitude of IFN-y production was not appreciably different from
5240 the negative control (IL18R_VHHaipi6), there was a trend for higher proinflammatory
5241 cytokine release for the vast majority of bispecific surrogate agonists tested. Most importantly,
5242 sdAb-based IL-18 mimetics IL18R_VHHa2pi5, IL18R_VHHa2pi7 and IL18R_VHHa8pi7
5243 evoked a statistically significant higher IFN-y production compared to IL18R_VHHaipi6,
5244 with IL18R_VHHa2pi5 triggering the most prominent release (mean release 1390.2 pg/ml).
5245 We also assessed IFN-y production of all the molecules without low-dose (rh) IL-12 (Fig. 8).
5246 Neither (rh) IL-18, nor the generated bispecifics triggered IFN-y production in the absence of 5247 (rh) IL-12, which is in accordance with the finding, that IL-18 induces IFN-y either with IL-12
5248 or IL- 15 (Dinarello et al., 2013).
5249
5250 To further narrow down surrogate agonists for in-depth characterization, we only focused on
5251 the three molecules that triggered significant release of IFN-y as well as IL18R_VHHa8pi5
5252 which also elicited a moderate production of IFN-y, albeit not being statistically significant.
5253 Remarkably, those four bispecifics were composed of different combinations of two sdAbs
5254 targeting IL-18Ra (VHHa2 and VHHa8) as well as two VHHs specific for the IL-18RP subunit
5255 (VHHP15 and VHHP17). For this, we stimulated human PBMCs isolated from healthy donors
5256 with the four bispecific candidates as well as (rh) IL-18 using a range of different concentrations
5257 in combination with low dose (rh) IL-12 (Fig. 3B). All four bispecific IL-18 mimetics triggered
5258 a dose-dependent release of IFN-y with potencies (EC50 of IFN-y production) of 9.1 nM -
5259 -107 nM (Table 1). Of note, IL18R_VHHa8pi5 did not reach a maximum IFN-y release at the
5260 highest concentration tested (1 pM). Hence, we haven’t been able to determine the EC50 of this
5261 bsAb accurately.
5262
5263 Besides functional characterization, we also determined affinities of the TOP4 IL-18 mimetics
5264 against each receptor subunit (Table 1, Fig. 9). Affinities for binding to IL-18Ra ranged from
5265 5.2 nM for IL18R_VHHa2pi5 to 35.6 nM for IL18R_VHHa8pi6. Also binding to the IL-18RP
5266 subunit ranged from the single digit picomolar range to binding in the lower double digit
5267 nanomolar range (for IL18R_VHHa2pi5). Interestingly, there was a trend towards higher
5268 potencies and efficacies in terms of IFN-y production for cytokine mimetics harboring a VHH
5269 with higher binding affinities to IL-18Ra which were mainly driven by an improved off-rate
5270 (VHHa2 vs. VHHa8).
5271
5272 Table 1: Binding kinetics and functional properties of the herein generated four leading bispecific IL-18 mimetics.
Figure imgf000181_0001
5273
5274 Example 5
5275 IL-18 cytokine mimetics with engineered antibody formats
5276 Next, we also set out to further augment the functional properties of the herein generated
5277 bispecific surrogate agonists. To this end, we focused on IL18R_VHHa2pi5 that triggered the
5278 most prominent production of IFN-y on human PBMCs. In particular, we aimed at investigating
5279 the influence of paratope valencies as well as the spatial orientation of individual paratopes
5280 within the overall antibody design architecture on triggering a functional IFN-y response. The
5281 different antibody designs are shown in Fig. 4A. Besides the strictly monovalent (1+1) VHH
5282 SEED format, that was exploited for initial IL- 18 mimetic generation and characterization
5283 (IL18R_VHHa2pi5), we employed two additional designs. In 2020, our group described a
5284 VHH-based IgG-like bi- and multispecific antibody platform that relies on the replacement of
5285 the VH and the VL regions of a conventional antibody by two independently functioning VHH
5286 domains, resulting in a bispecific, tetravalent antibody derivative, herein referred to as single
5287 domain-based IgG (sdlgG) (Pekar et al., 2020). We engrafted the IL-18Ra-specific VHHa2
5288 onto the CHI domain of the effector silenced heavy chain (IgGl) and the IL-18RP-targeting
5289 VHHP15 onto the constant region of the lambda light chain (IL18R_sdIgGa2pi5). In addition
5290 to this IgG-like design, we also constructed tandem- VHH arrangements, grafted onto the hinge¬
5291 region of an effector-silenced IgGl Fc region (2+2). The two independent VHH domains were
5292 separated by a five amino acid Gly4Ser-linker. For this, we assessed both orientations, VHHa2
5293 followed by VHHP15 (from N-terminus to C-terminus, IL18R_tanVHHa2pi5) and vice versa
5294 (IL18R_tanVHHpi5a2). In addition to these four molecules in total (including the initial 1+1
5295 SEED design), all formats were also produced harboring the E340G mutation, that was first
5296 described by Parren and colleagues (de Jong et al., 2016). This mutation enhances antibody
5297 hexamer formation on the target cell surface after antigen binding and was initially utilized to
5298 induce conditional complement-dependent cytotoxicity. In this regard, we speculated that on-
5299 target hexamerization of the different surrogate agonist formats would result into enhanced
5300 receptor clustering and consequently into an improved IFN-y response.
5301
5302 Expression yields after protein A purification for the different designs ranged from 12 mg/L for
5303 IL18R_sdIgGa2pi5_E430G to up to 375.2 mg/L for IL18R_tanVHHa2pi5 (Table 2).
5304 Generally, we observed a trend towards lower expression for molecules harboring the E430G
5305 mutation. Interestingly, the different formats comprising the VHH tandem arrangements
5306 without the E430G amino acid exchanges displayed expression yields of more than 300 mg/L, 5307 indicating high production profiles for transient antibody expression. Most of the different
5308 bispecific IL-18 mimetic designs also showed quite favorable aggregation properties as
5309 indicated by SEC profiles above 90% target peak post protein A purification. Only for two
5310 molecules with implemented E430G mutations (IL18R_VHHa2pi5_E430G and
5311 IL18R_sdIgGa2pi5_E430G), we observed SEC purities of 79.3% and 82.6%, respectively.
5312 Hence, both molecules were further polished by preparative SEC, yielding final purities of
5313 97.3% and 98.3% (Fig. 10). Additionally, also the thermal stabilities of the engineered designs
5314 were monitored by measuring the tonset that is the lowest temperature at which a protein starts
5315 to unfold. Generally, all molecules not harboring the E430G exchanges showed thermal
5316 stabilities (tonsets) above 50 °C, indicating favorable biophysical properties, whereas all designs
5317 with incorporated E430G mutations showed diminished stabilities by 4 °C - 8.6 °C (Table 2,
5318 Fig. 11)
5319
5320
21 Table 2: Biophysical, biochemical and functional attributes of engineered cytokine mimetic formats.
Figure imgf000184_0001
22 *only for IL18R_VHHa2pi5_E430G and IL18R_sdIgGa2pi5_E430G preparative SEC was applied for polishing.
5323 Subsequently, all different antibody designs based on VHHa2 and VHHpi5 were analyzed by
5324 means of triggering IFN-y production on human PBMCs isolated from six different donors in
5325 total. The different formats were used at two different concentrations (10 nM and 1 nM).
5326 Intriguingly, profound differences were unveiled for the different design architectures (Fig.
5327 4B) The engineered sdlgG-based cytokine mimetic (IL18R_sdIgGa2pi5) did not induce a
5328 substantially improved IFN-y response compared to the initial (1+1) SEED design termed
5329 IL18R_VHHa2pi5 (332.1 pg/ml and 376.1 pg/ml for IL18R_sdIgGa2pi5 at 10 nM and 1 nM,
5330 respectively vs 418.2 pg/ml and 115.1 pg/ml). Hence, we de-prioritized this format for further
5331 analysis. In contrast to this, stimulation of PBMCs with both tandem arrangements
5332 IL18R_tanVHHpi5a2 and IL18R_tanVHHa2pi5 provoked a significantly augmented IFN-y
5333 production with IL18R_tanVHHa2pi5 eliciting the strongest release (1116.5 pg/ml and 1238.2
5334 pg/ml at 10 nM and 1 nM, respectively) within the set of engineered IL- 18 mimetic
5335 architectures. In general, implementation of the E430G amino acid exchanges did not seem to
5336 improve IFN-y release. Consequently, we also discarded all formats harboring the E430G
5337 mutation for additional characterization.
5338
5339 Both formats comprising the VHH arranged in tandem (IL18R_tanVHHpi5a2 and
5340 IL18R_tanVHHa2pi5) as well as the initial 1+1 SEED design (IL18R_ VHHa2pi5) were
5341 directly compared to (rh) IL- 18 regarding their potential to elicit a functional IFN-y response
5342 (Fig. 4C, Table 2). In comparison with (rh) IL-18, the capacity of IL18R_VHHa2pi5 to trigger
5343 IFN-y release on PBMCS was clearly attenuated (ECso of 2.4 nM for IL18R_VHHa2pi5 v.s
5344 61 pM for (rh) IL-18).
5345
5346 In contrast to this, the potential to evoke IFN-y production of both mimetics harboring the
5347 tandem arrangements were substantially augmented (ECso of 16 pM for IL18R_tanVHHpi5a2
5348 and 6 pM for IL 18R_tanVHHa2p 15), resulting in molecules that were significantly more potent
5349 than (rh) IL-18. While potencies were fairly similar between both tandem formats, the
5350 magnitude IFN-y release was quite different. In this regard, IL18R_tanVHHa2pi5 caused a
5351 maximum release that was quite similar to (rh)IL-18 (2130 pg/ml vs 2097 pg/ml), whereas
5352 IL18R_tanVHHpi5a2 elicited a significantly reduced maximum IFN-y production of 1095
5353 pg/ml. Of note, we observed a strong hooking effect (bell shaped curve) for (rh) IL-18, i.e.,
5354 reduced IFN-y release with high and increasing compound concentrations (Fig. 12). This effect
5355 was clearly not as pronounced for the different surrogate agonist formats tested.
5356 5357 To investigate whether biofunctional differences also translate into differential biochemical
5358 attributes, we performed BLI experiments that were aimed at evaluating target affinities as well
5359 as binding avidities of IL18R_VHHa2pi5, IL18R_tanVHHa2pi5 and IL18R_tanVHHpi5a2.
5360
5361 For determining affinities, bispecific cytokine mimetics were captured on the sensor tips and
5362 the respective IL-18 receptor subunits were exploited as analyte (Table 3). Compared with
5363 IL18R_VHHa2pi5, binding affinities for the inner paratopes of tandem IL-18 mimetics were
5364 slightly reduced, whereas kinetics for the outer sdAb remained largely unaffected.
5365
5366 To evaluate avidities, the respective receptor subunits were captured on the sensor tips and
5367 binding was assessed for the monovalent (for each target) bsAb IL18R_VHHa2pi5 as well as
5368 for the bivalent (for binding to each receptor chain) surrogate agonists IL18R_tanVHHa2pi5
5369 and IL18R_tanVHHpi5a2 (Table 3, Figure 13). In this experimental setting,
5370 IL18R_VHHa2pi5 displayed binding to both respective receptor chains in the lower double
5371 digit nanomolar range. In contrast to this, apparent binding affinities for both tandem IL-18
5372 mimetics could not be determined, which was driven by the fact that no dissociation from the
5373 receptor subunits was observed. This is giving strong evidence for high avidity binding of both
5374 tandem surrogate agonists.
75 Table 3: Apparent binding affinities of selected surrogate agonists in an affinity driven BLI experiment and in an avidity driven setting.
Figure imgf000187_0001
76 77
Example 6
Bispecific IL-18 mimetics are resistant to inhibition by IL-18BP
Finally, we wanted to analyze whether the herein generated IL-18 mimetics are inhibited by IL- 18BP receptor decoy. To this end, we employed the initially generated TOP4 cytokine mimetics, IL18R_VHHa2pi5, IL18R_VHHa2pi7, IL18R_VHHa8pi7 and IL18R_VHHa8pi5 as well as both tandem-engineered surrogate agonists IL18R_tanVHHpi5a2 and IL18R_tanVHHpi5a2 (which are format engineered derivatives of IL18R_VHHa2pi5). As determined by BLI, no binding interaction of (rh) IL-18BP was measurable to any of the IL-18 mimetics exploited (Fig. 14A). Opposed to this, (rh) IL-18BP showed high-affinity binding to (rh)IL-18 in the picomolar range (Fig. 14B). Both, IL-18BP and IL-18Ra bind to IL-18 at an overlapping interface (Zhou et al., 2020). Of note, all six surrogate agonists showed competitive binding with (rh) IL-18 for targeting IL-18Ra, indicating a similar or at least a partially overlapping epitope on IL-18Ra (Fig. 15 and Table 1).
Ultimately, we evaluated the resistance of the engineered IL-18 mimetics to IL-18BP inhibition on PBMC stimulation. Therefore, we focused on both tandem IL-18 mimetics, showing potencies at a similar level as (rh)IL-18 in provoking an IFN-y response. Both cytokine mimetics as well as (rh)IL-18 were utilized at a fixed concentration of 0.5 nM combined with low dose (rh)IL-12 (10 ng/ml) and increasing concentrations of (rh)IL-18BP were titrated (Fig. 4D). Contrary to (rh)IL18 that was efficiently inhibited by (rh)IL-18BP (IC50 of 2.2 nM), both tandem IL-18 mimetics, IL18R_tanVHHpi5a2 and IL18R_tanVHHpi5a2 triggered a robust IFN-y release, regardless of the IL-18BP receptor decoy concentration tested.
REFERENCES
Amin, A., and White, R.L. (2014). Interleukin-2 in Renal Cell Carcinoma: A Has-Been or a Still-Viable Option? Journal of Kidney Cancer and VHL 7, 74-83. 10.15586/jkcvhl.2014.18.
Atallah-Yunes, S.A., and Robertson, M.J. (2022). Cytokine Based Immunotherapy for Cancer and Lymphoma: Biology, Challenges and Future Perspectives. Frontiers in Immunology 13. 10.3389/fimmu.2022.872010.
Berraondo, P., Sanmamed, M.F., Ochoa, M.C., Etxeberria, I., Aznar, M.A., Perez-Gracia, J.L., Rodriguez-Ruiz, M.E., Ponz-Sarvise, M., Castanon, E., and Melero, I. (2019). Cytokines in clinical cancer immunotherapy. British Journal of Cancer 120, 6-15. 10.1038/s41416-018- 0328-y.
Chanier, T., and Chames, P. (2019). Nanobody Engineering: Toward Next Generation Immunotherapies and Immunoimaging of Cancer. Antibodies 8, 13. 10.3390/antib8010013.
Davis, J.H., Aperlo, C., Li, Y., Kurosawa, E., Lan, Y., Lo, K.-M., and Huston, J.S. (2010). SEEDbodies: fusion proteins based on strand-exchange engineered domain (SEED) CH3 heterodimers in an Fc analogue platform for asymmetric binders or immunofusions and bispecific antibodiesf. Protein Engineering, Design and Selection 23, 195-202. 10.1093/protein/gzp094. de Jong, R.N., Beurskens, F.J., Verploegen, S., Strumane, K., van Kampen, M.D., Voorhorst, M., Horstman, W., Engelberts, P.J., Oostindie, S.C., Wang, G., et al. (2016). A Novel Platform for the Potentiation of Therapeutic Antibodies Based on Antigen-Dependent Formation of IgG Hexamers at the Cell Surface. PLOS Biology 14, el002344. 10.1371/journal.pbio.1002344.
Dinarello, C.A., Novick, D., Kim, S., and Kaplanski, G. (2013). Interleukin- 18 and IL-18 Binding Protein. Frontiers in Immunology 4. 10.3389/fimmu.2013.00289.
Dolgin, E. (2022). IL-2 upgrades show promise at ASCO. Nature Biotechnology 40, 986-988. 10.1038/s41587-022-01390-3.
Eliason, J.F. (2001). Pegylated Cytokines: Potential Application in Immunotherapy of Cancer. BioDrugs 15, 705-711. 10.2165/00063030-200115110-00001. Harris, K.E., Lorentsen, K.J., Malik-Chaudhry, H.K., Loughlin, K., Basappa, H.M., Hartstein, S., Ahmil, G., Allen, N.S., Avanzino, B.C., Balasubramani, A., et al. (2021). A bispecific antibody agonist of the IL-2 heterodimeric receptor preferentially promotes in vivo expansion of CD8 and NK cells. Scientific Reports 11. 10.1038/s41598-021-90096-8.
Holder, P.G., Lim, S.A., Huang, C.S., Sharma, P., Dagdas, Y.S., Bulutoglu, B., and Sockolosky, J.T. (2022). Engineering interferons and interleukins for cancer immunotherapy. Advanced Drug Delivery Reviews 182, 114112. 10.1016/j.addr.2022.114112.
Jazayeri, J. A., and Carroll, G.J. (2008). Fc-Based Cytokines: Prospects for Engineering Superior Therapeutics. BioDrugs 22, 11-26. 10.2165/00063030-200822010-00002.
Klausz, K., Pekar, L., Boje, A.S., Gehlert, C.L., Krohn, S., Gupta, T., Xiao, Y., Krah, S., Zaynagetdinov, R., Lipinski, B., et al. (2022). Multifunctional NK Cell-Engaging Antibodies Targeting EGFR and NKp30 Elicit Efficient Tumor Cell Killing and Proinflammatory Cytokine Release. The Journal of Immunology 209, 1724-1735. 10.4049/jimmunol.2100970.
Klein, C., Waldhauer, I., Nicolini, V.G., Freimoser-Grundschober, A., Nayak, T., Vugts, D.J., Dunn, C., Bolijn, M., Benz, J., Stihle, M., et al. (2017). Cergutuzumab amunaleukin (CEA- IL2v), a CEA-targeted IL-2 variant-based immunocytokine for combination cancer immunotherapy: Overcoming limitations of aldesleukin and conventional IL-2 -based immunocytokines. Oncolmmunology 6, el277306. 10.1080/2162402X.2016.1277306.
Lipinski, B., Arras, P., Pekar, L., Klewinghaus, D., Boje, A.S., Krah, S., Zimmermann, J., Klausz, K., Peipp, M., Siegmund, V., et al. (2023). NKP46 -specific single domain antibodies enable facile engineering of various potent NK cell engager formats. Protein Science. 10.1002/pro.4593.
Moraga, I., Wemig, G., Wilmes, S., Gryshkova, V., Richter, C.P., Hong, W.-J., Sinha, R., Guo, F., Fabionar, H., Wehrman, T.S., et al. (2015). Tuning Cytokine Receptor Signaling by Reorienting Dimer Geometry with Surrogate Ligands. Cell 160, 1196-1208.
10.1016/j.cell.2015.02.011.
Murer, P., and Neri, D. (2019). Antibody-cytokine fusion proteins: A novel class of biopharmaceuticals for the therapy of cancer and of chronic inflammation. New Biotechnology 52, 42-53. 10.1016/j.nbt.2019.04.002. Nakamura, K., Bald, T., and Smyth, M.J. (2020). Cancer-killing, decoy-resistant interleukin- 18. Immunology & Cell Biology 98, 434-436. 10.1111/imcb.12359.
Neri, D., and Sondel, P.M. (2016). Immunocytokines for cancer treatment: past, present and future. Current Opinion in Immunology 40, 96-102. 10.1016/j.coi.2016.03.006.
Pekar, L., Busch, M., Valldorf, B., Hinz, S.C., Toleikis, L., Krah, S., and Zielonka, S. (2020). Biophysical and biochemical characterization of a VHH-based IgG-like bi- and trispecific antibody platform. mAbs, 1812210. 10.1080/19420862.2020.1812210.
Pires, I.S., Hammond, P.T., and Irvine, D.J. (2021). Engineering Strategies for Immunomodulatory Cytokine Therapies: Challenges and Clinical Progress. Advanced Therapeutics 4, 2100035. 10.1002/adtp.202100035.
Propper, D.J., and Balkwill, F.R. (2022). Harnessing cytokines and chemokines for cancer therapy. Nature Reviews Clinical Oncology 19, 237-253. 10.1038/s41571-021-00588-9.
Robertson, M.J., Mier, J.W., Logan, T., Atkins, M., Koon, H., Koch, K.M., Kathman, S., Pandite, L.N., Oei, C., Kirby, L.C., et al. (2006). Clinical and Biological Effects of Recombinant Human Interleukin- 18 Administered by Intravenous Infusion to Patients with Advanced Cancer. Clinical Cancer Research 12, 4265-4273. 10.1158/1078-0432. CCR-06- 0121.
Robertson, M.J., Kirkwood, J.M., Logan, T.F., Koch, K.M., Kathman, S., Kirby, L.C., Bell, W.N., Thurmond, L.M., Weisenbach, J., and Dar, M.M. (2008). A Dose-Escalation Study of Recombinant Human Interleukin- 18 Using Two Different Schedules of Administration in Patients with Cancer. Clinical Cancer Research 14, 3462-3469. 10.1158/1078-0432. CCR-07- 4740.
Robertson, M.J., Kline, J., Struemper, H., Koch, K.M., Bauman, J.W., Gardner, O.S., Murray, S.C., Germaschewski, F., Weisenbach, J., Jonak, Z., et al. (2013). A Dose-Escalation Study of Recombinant Human Interleukin- 18 in Combination With Rituximab in Patients With NonHodgkin Lymphoma. Journal of Immunotherapy 36, 331-341.
10.1097/C JI.ObO13e31829d7e2e.
Robertson, M.J., Stamatkin, C.W., Pelloso, D., Weisenbach, J., Prasad, N.K., and Safa, A.R. (2018). A Dose-escalation Study of Recombinant Human Interleukin- 18 in Combination With Ofatumumab After Autologous Peripheral Blood Stem Cell Transplantation for Lymphoma.
Journal of Immunotherapy 41, 151-157. 10.1097/CJI.0000000000000220.
Roth, L., Krah, S., Klemm, J., Gunther, R., Toleikis, L., Busch, M., Becker, S., and Zielonka, S. (2020). Isolation of Antigen-Specific VHH Single-Domain Antibodies by Combining Animal Immunization with Yeast Surface Display. Methods Mol. Biol. 2070, 173-189. 10.1007/978-l-4939-9853-l_10.
Saxton, R.A., Glassman, C.R., and Garcia, K.C. (2023). Emerging principles of cytokine pharmacology and therapeutics. Nature Reviews Drug Discovery 22, 21-37. 10.1038/s41573- 022-00557-6.
Simpkins, F., Flores, A., Chu, C., Berek, J.S., Lucci, J., Murray, S., Bauman, J., Struemper, H., Germaschewski, F., Jonak, Z., et al. (2013). Chemoimmunotherapy Using Pegylated Liposomal Doxorubicin and Interleukin- 18 in Recurrent Ovarian Cancer: A Phase I Dose-Escalation Study. Cancer Immunology Research 1, 168-178. 10.1158/2326-6066.CIR-13-0098.
Tarhini, A.A., Millward, M., Mainwaring, P., Kefford, R., Logan, T., Pavlick, A., Kathman, S.J., Laubscher, K.H., Dar, M.M., and Kirkwood, J.M. (2009). A phase 2, randomized study of SB-485232, rhIL-18, in patients with previously untreated metastatic melanoma. Cancer 115, 859-868. 10.1002/cncr.24100.
Yasuda, K., Nakanishi, K., and Tsutsui, H. (2019). Interleukin- 18 in Health and Disease. International Journal of Molecular Sciences 20, 649. 10.3390/ijms20030649.
Yen, M., Ren, J., Liu, Q., Glassman, C.R., Sheahan, T.P., Picton, L.K., Moreira, F.R., Rustagi, A., Jude, K.M., Zhao, X., et al. (2022). Facile discovery of surrogate cytokine agonists. Cell 185, 1414-1430. el9. 10.1016/j.cell.2022.02.025.
Zheng, X., Wu, Y., Bi, J., Huang, Y., Cheng, Y., Li, Y., Wu, Y., Cao, G., and Tian, Z. (2022). The use of supercytokines, immunocytokines, engager cytokines, and other synthetic cytokines in immunotherapy. Cellular & Molecular Immunology 19, 192-209. 10.1038/s41423-021- 00786-6.
Zhou, T., Damsky, W., Weizman, O.-E., McGeary, M.K., Hartmann, K.P., Rosen, C.E., Fischer, S., Jackson, R., Flavell, R.A., Wang, J., et al. (2020). IL-18BP is a secreted immune checkpoint and barrier to IL-18 immunotherapy. Nature 583, 609-614. 10.1038/s41586-020- 2422-6.

Claims

1. A compound comprising
- a first binding module which is a VHH antibody domain or fragment thereof, wherein
(a) said VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of one VHH selected from the group consisting of VHH1, VHH2, VHH5, VHH6, VHH8, VHH9 and VHH10 as shown in the Table of CDRs;
(b) said VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 as defined in (a) with modification, wherein the modification is that the sequence of at least one of CDR1, CDR2 and CDR3 is humanized; or
(c) said VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 as defined in (a) with modification, wherein the modification is
- the replacement, addition or deletion of up to three amino acids in CDR1,
- the replacement, addition or deletion of up to three amino acids in CDR2 and/or
- the replacement, addition or deletion of up to three amino acids in CDR3;
- a second binding module which is a VHH antibody domain or a fragment thereof, wherein
(d) said VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of one VHH selected from the group consisting of VHH12, VHH13, VHH14, VHH15, VHH17, VHH18, VHH20, VHH21 and VHH22 as shown in the Table of CDRs, wherein said VHH antibody domain or fragment thereof defined in (d) is selected as follows: if the VHH antibody domain of (a) or the fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of VHH1, then the VHH antibody domain of (d) or the fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of one VHH selected from the group consisting of VHH12, VHH13, VHH15, VHH17, VHH20, VHH21 and VHH22 as shown in the Table of CDRs; if the VHH antibody domain of (a) or the fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of VHH2, then the VHH antibody domain of (d) or the fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of one VHH selected from the group consisting of VHH12, VHH13, VHH15, VHH17, VHH18, VHH20, VHH21 and VHH22 as shown in the Table of CDRs; if the VHH antibody domain of (a) or the fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of VHH5, then the VHH antibody domain of (d) or the fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of one VHH selected from the group consisting of VHH13 and VHH14 as shown in the Table of CDRs; if the VHH antibody domain of (a) or the fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of VHH6, then the VHH antibody domain of (d) or the fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of one VHH selected from the group consisting of VHH17, VHH20, VHH21 and VHH22 as shown in the Table of CDRs; if the VHH antibody domain of (a) or the fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of VHH8, then the VHH antibody domain of (d) or the fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of one VHH selected from the group consisting of VHH12, VHH13, VHH17, VHH18, VHH20 and VHH21 as shown in the Table of CDRs; if the VHH antibody domain of (a) or the fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of VHH9, then the VHH antibody domain of (d) or the fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of one VHH selected from the group consisting of VHH12, VHH13, VHH15, VHH17, VHH18, VHH20, VHH21 and VHH22 as shown in the Table of CDRs; if the VHH antibody domain of (a) or the fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of VHH10, then the VHH antibody domain of (d) or the fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 of one VHH selected from the group consisting of VHH13, VHH20 and VHH21 as shown in the Table of CDRs;
(e) said VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 as defined in (d) with modification, wherein the modification is that the sequence of at least one of CDR1, CDR2 and CDR3 is humanized; or
(f) said VHH antibody domain or fragment thereof comprises the complementarity determining regions CDR1, CDR2 and CDR3 as defined in (d) with modification, wherein the modification is
- the replacement, addition or deletion of up to one amino acid in CDR1 ,
- the replacement, addition or deletion of up to one amino acid in CDR2 and/or
- the replacement, addition or deletion of up to one amino acid in CDR3;
Table of CDRs:
Figure imgf000196_0001
Figure imgf000197_0001
Figure imgf000198_0001
2. The compound according to claim 1, wherein said VHH antibody domain or fragment thereof defined in (a) comprises the complementarity determining regions CDR1, CDR2 and CDR3 of one VHH selected from the group consisting of VHH2 and VHH8 as shown in the Table of CDRs and wherein said VHH antibody domain or fragment thereof defined in (d) comprises the complementarity determining regions CDR1, CDR2 and CDR3 of one VHH selected from the group consisting of VHH15 and VHH17 as shown in the Table of CDRs.
3. The compound according to claim 1, wherein said VHH antibody domain or fragment thereof defined in (a) comprises the complementarity determining regions CDR1, CDR2 and CDR3 of VHH2 as shown in the Table of CDRs and wherein said VHH antibody domain or fragment thereof defined in (d) comprises the complementarity determining regions CDR1, CDR2 and CDR3 of VHH15 as shown in the Table of CDRs.
4. A compound comprising
- a first binding module which is a VHH antibody domain or fragment thereof, wherein
(A) said VHH antibody domain comprises the amino acid sequence of a VHH selected from the group consisting of VHH1, VHH2, VHH5, VHH6, VHH8, VHH9 and VHH10 as shown in the Table of VHH Sequences;
(B) said VHH antibody domain comprises a VHH sequence as defined in (A) with modification, wherein the modification is that said sequence is humanized;
(C) said VHH antibody domain comprises a VHH sequence as defined in (A) with modification, wherein the modification is the replacement, addition or deletion of up to 25 amino acids; or
(D) said VHH antibody domain comprises a VHH sequence that is at least 75% identical to a VHH sequence referred to in (A);
- a second binding module which is a VHH antibody domain or a fragment thereof, wherein
(E) said VHH antibody domain comprises the amino acid sequence of a VHH selected from the group consisting of VHH12, VHH13, VHH14, VHH15, VHH17, VHH18, VHH20, VHH21 and VHH22 as shown in the Table of VHH Sequences, wherein said VHH antibody domain of (E) is selected as follows: if the VHH antibody domain of (A) comprises the amino acid sequence of VHH1, then the VHH antibody domain of (E) comprises the amino acid sequence of one VHH selected from the group consisting of VHH12, VHH13, VHH15, VHH17, VHH20, VHH21 and VHH22 shown in the Table of VHH Sequences; if the VHH antibody domain of (A) comprises the amino acid sequence of VHH2, then the VHH antibody domain of (E) comprises the amino acid sequence of one VHH selected from the group consisting of VHH12, VHH13, VHH15, VHH17, VHH18, VHH20, VHH21 and VHH22 shown in the Table of VHH Sequences; if the VHH antibody domain of (A) comprises the amino acid sequence of VHH5, then the VHH antibody domain of (E) comprises the amino acid sequence of one VHH selected from the group consisting of VHH13 and VHH14 shown in the Table of VHH Sequences; if the VHH antibody domain of (A) comprises the amino acid sequence of VHH6, then the VHH antibody domain of (E) comprises the amino acid sequence of one VHH selected from the group consisting of VHH17, VHH20, VHH21 and VHH22 shown in the Table of VHH Sequences; if the VHH antibody domain of (A) comprises the amino acid sequence of VHH8, then the VHH antibody domain of (E) comprises the amino acid sequence of one VHH selected from the group consisting of VHH12, VHH13, VHH17, VHH18, VHH20 and VHH21 shown in the Table of VHH Sequences; if the VHH antibody domain of (A) comprises the amino acid sequence of VHH9, then the VHH antibody domain of (E) comprises the amino acid sequence of one VHH selected from the group consisting of VHH12, VHH13, VHH15, VHH17, VHH18, VHH20, VHH21 and VHH22 shown in the Table of VHH Sequences; if the VHH antibody domain of (A) comprises the amino acid sequence of VHH10, then the VHH antibody domain of (E) comprises the amino acid sequence of one VHH selected from the group consisting of VHH13, VHH20 and VHH21 shown in the Table of VHH Sequences;
(F) said VHH antibody domain comprises a VHH sequence as defined in (E) with modification, wherein the modification is that said sequence is humanized;
(G) said VHH antibody domain comprises a VHH sequence as defined in (E) with modification, wherein the modification is the replacement, addition or deletion of up to 10 amino acids; or
(H) said VHH antibody domain comprises a VHH sequence that is at least 90% identical to a VHH sequence referred to in (E);
Table of VHH Sequences:
Figure imgf000200_0001
Figure imgf000201_0001
Figure imgf000202_0001
5. The compound according to claim 4, wherein said VHH antibody domain of (A) comprises the amino acid sequence of one VHH selected from the group consisting of VHH2 and VHH8 shown in the Table of VHH Sequences and wherein said VHH antibody domain of (E) comprises the amino acid sequence of one VHH selected from the group consisting of VHH15 and VHH17 shown in the Table of VHH Sequences.
6. The compound according to claim 4, wherein said VHH antibody domain of (A) comprises the amino acid sequence of VHH2 shown in the Table of VHH Sequences and wherein said VHH antibody domain of (E) comprises the amino acid sequence of VHH15 shown in the Table of VHH Sequences.
7. The compound according to any one of claims 1 to 6, wherein said compound is a bispecific antibody molecule prepared by the SEED technology.
8. The compound according to any one of claims 1 to 6, wherein said compound is a single domain-based IgG (sdlgG), wherein said sdlgG is a conventional IgG antibody in which each of the two VH regions is replaced by a copy of said first binding module, and each of the two VL regions is replaced by a copy of said second binding module, resulting in a bispecific, tetravalent antibody.
9. The compound according to any one of claims 1 to 6, wherein said compound consists of a IgG Fc region to which two copies of a tandem -VHH arrangement are covalently linked at the hinge-region, wherein said tandem-VHH arrangement consists of a first VHH antibody domain that is covalently linked to a second VHH antibody domain, wherein said second VHH antibody domain is covalently linked to the hinge region of said Fc region, resulting in a bispecific, tetravalent compound.
10. The compound according to any one of claims 1 to 9, wherein said compound binds to IL-18Ra ECD with a KD of 100 nM or stronger.
11. The compound according to any one of claims 1 to 10, wherein said compound binds to IL-18RP ECD with a KD of 100 nM or stronger.
12. The compound according to any one of claims 1 to 11, wherein said compound is capable of activating the IL-18 receptor IL-18R by binding to IL-18Ra and IL-18RP.
13. The compound according to any one of claims 1 to 12, wherein said compound is capable of triggering dose-dependent IL-18R downstream signaling on IL- 18 reporter cells.
14. The compound according to any one of claims 1 to 13, wherein said compound is capable of inducing IFN-y release by peripheral blood mononuclear cells (PBMCs) in the presence of low-dose IL-12 (10 ng/ml).
15. A pharmaceutical composition comprising the compound according to any one of claims 1 to 14.
PCT/EP2024/065796 2023-06-09 2024-06-07 Il-18 mimetics Pending WO2024251983A1 (en)

Priority Applications (2)

Application Number Priority Date Filing Date Title
CN202480051902.XA CN121666402A (en) 2023-06-09 2024-06-07 IL-18 mimetics
AU2024286186A AU2024286186A1 (en) 2023-06-09 2024-06-07 Il-18 mimetics

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
EP23178542.9 2023-06-09
EP23178542 2023-06-09

Publications (1)

Publication Number Publication Date
WO2024251983A1 true WO2024251983A1 (en) 2024-12-12

Family

ID=86760234

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/EP2024/065796 Pending WO2024251983A1 (en) 2023-06-09 2024-06-07 Il-18 mimetics

Country Status (3)

Country Link
CN (1) CN121666402A (en)
AU (1) AU2024286186A1 (en)
WO (1) WO2024251983A1 (en)

Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2025090519A1 (en) * 2023-10-23 2025-05-01 Diagonal Therapeutics Inc. Heteromeric agonistic antibodies to il-18 receptor

Citations (9)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP0404097A2 (en) 1989-06-22 1990-12-27 BEHRINGWERKE Aktiengesellschaft Bispecific and oligospecific, mono- and oligovalent receptors, production and applications thereof
WO1993011161A1 (en) 1991-11-25 1993-06-10 Enzon, Inc. Multivalent antigen-binding proteins
WO1994004678A1 (en) 1992-08-21 1994-03-03 Casterman Cecile Immunoglobulins devoid of light chains
WO2010040736A2 (en) * 2008-10-07 2010-04-15 Ablynx Nv Amino acid sequences directed against il18 and/or the il-18 receptor and polypeptides comprising the same for the treatment of diseases and/or disorders associated with il-18 mediated signaling
US8216805B2 (en) 1995-03-01 2012-07-10 Genentech, Inc. Knobs and holes heteromeric polypeptides
WO2016087650A1 (en) 2014-12-05 2016-06-09 Merck Patent Gmbh Domain-exchanged antibody
WO2019051015A1 (en) * 2017-09-06 2019-03-14 Yale University Interleukin-18 variants and methods of use
WO2019242655A1 (en) * 2018-06-19 2019-12-26 Shanghaitech University Human antibodies to human interleukin 18 receptor alpha and beta
WO2024086852A1 (en) * 2022-10-21 2024-04-25 Diagonal Therapeutics Inc. Heteromeric agonistic antibodies to il-18 receptor

Patent Citations (10)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP0404097A2 (en) 1989-06-22 1990-12-27 BEHRINGWERKE Aktiengesellschaft Bispecific and oligospecific, mono- and oligovalent receptors, production and applications thereof
WO1993011161A1 (en) 1991-11-25 1993-06-10 Enzon, Inc. Multivalent antigen-binding proteins
WO1994004678A1 (en) 1992-08-21 1994-03-03 Casterman Cecile Immunoglobulins devoid of light chains
US5759808A (en) 1992-08-21 1998-06-02 Vrije Universiteit Brussel Immunoglobulins devoid of light chains
US8216805B2 (en) 1995-03-01 2012-07-10 Genentech, Inc. Knobs and holes heteromeric polypeptides
WO2010040736A2 (en) * 2008-10-07 2010-04-15 Ablynx Nv Amino acid sequences directed against il18 and/or the il-18 receptor and polypeptides comprising the same for the treatment of diseases and/or disorders associated with il-18 mediated signaling
WO2016087650A1 (en) 2014-12-05 2016-06-09 Merck Patent Gmbh Domain-exchanged antibody
WO2019051015A1 (en) * 2017-09-06 2019-03-14 Yale University Interleukin-18 variants and methods of use
WO2019242655A1 (en) * 2018-06-19 2019-12-26 Shanghaitech University Human antibodies to human interleukin 18 receptor alpha and beta
WO2024086852A1 (en) * 2022-10-21 2024-04-25 Diagonal Therapeutics Inc. Heteromeric agonistic antibodies to il-18 receptor

Non-Patent Citations (46)

* Cited by examiner, † Cited by third party
Title
"Remington: The Science and Practice of Pharmacy", 2012, PHARMACEUTICAL PRESS
AMIN, A.WHITE, R.L.: "Interleukin-2 in Renal Cell Carcinoma: A Has-Been or a Still-Viable Option?", JOURNAL OF KIDNEY CANCER AND VHL, vol. 1, 2014, pages 74 - 83
ATALLAH-YUNES, S.A.ROBERTSON, M.J.: "Cytokine Based Immunotherapy for Cancer and Lymphoma: Biology, Challenges and Future Perspectives", FRONTIERS IN IMMUNOLOGY, vol. 13, 2022
BERRAONDO, P.SANMAMED, M.F.OCHOA, M.C.ETXEBERRIA, I.AZNAR, M.APÉREZ-GRACIA, J.L.RODRIGUEZ-RUIZ, M.E.PONZ-SARVISE, M.CASTAFION, E.M: "Cytokines in clinical cancer immunotherapy", BRITISH JOURNAL OF CANCER, vol. 120, 2019, pages 6 - 15, XP036927199, DOI: 10.1038/s41416-018-0328-y
BRENNAN ET AL., SCIENCE, vol. 229, 1985, pages 81
CHANIER, T.CHAMES, P.: "Nanobody Engineering: Toward Next Generation Immunotherapies and Immunoimaging of Cancer", ANTIBODIES, vol. 8, 2019, pages 13
DAVIS, J.H.APERLO, C.LI, Y.KUROSAWA, E.LAN, Y.LO, K.-M.HUSTON, J.S.: "SEEDbodies: fusion proteins based on strand-exchange engineered domain (SEED) CH3 heterodimers in an Fc analogue platform for asymmetric binders or immunofusions and bispecific antibodies†", PROTEIN ENGINEERING, DESIGN AND SELECTION, vol. 23, 2010, pages 195 - 202, XP055018770, DOI: 10.1093/protein/gzp094
DE JONG, R.N.BEURSKENS, F.J.VERPLOEGEN, S.STRUMANE, K.VAN KAMPEN, M.D.VOORHORST, M.HORSTMAN, W.ENGELBERTS, P.J.OOSTINDIE, S.C.WANG: "Novel Platform for the Potentiation of Therapeutic Antibodies Based on Antigen-Dependent Formation of IgG Hexamers at the Cell Surface", PLOS BIOLOGY, vol. 14, 2016, pages e1002344
DINARELLO, C.A.NOVICK, D.KIM, S.KAPLANSKI, G.: "Interleukin-18 and IL-18 Binding Protein", FRONTIERS IN IMMUNOLOGY, 2013, pages 4
DOLGIN, E.: "IL-2 upgrades show promise at ASCO", NATURE BIOTECHNOLOGY, vol. 40, 2022, pages 986 - 988, XP037903059, DOI: 10.1038/s41587-022-01390-3
ELIASON, J.F.: "Pegylated Cytokines: Potential Application in Immunotherapy of Cancer", BIODRUGS, vol. 15, 2001, pages 705 - 711, XP009088422, DOI: 10.2165/00063030-200115110-00001
HARRIS KATHERINE E. ET AL: "A bispecific antibody agonist of the IL-2 heterodimeric receptor preferentially promotes in vivo expansion of CD8 and NK cells", SCIENTIFIC REPORTS, vol. 11, no. 1, 1 December 2021 (2021-12-01), XP055905872, Retrieved from the Internet <URL:https://www.nature.com/articles/s41598-021-90096-8.pdf> DOI: 10.1038/s41598-021-90096-8 *
HARRIS, K.E.LORENTSEN, K.J.MALIK-CHAUDHRY, H.K.LOUGHLIN, K.BASAPPA, H.M.HARTSTEIN, S.AHMIL, G.ALLEN, N.S.AVANZINO, B.C.BALASUBRAMA: "A bispecific antibody agonist of the IL-2 heterodimeric receptor preferentially promotes in vivo expansion of CD8 and NK cells", SCIENTIFIC REPORTS, 2021, pages 11
HOLDER, P.G.LIM, S.A.HUANG, C. S.SHARMA, P.DAGDAS, Y. S.BULUTOGLU, B.SOCKOLOSKY, J.T.: "Engineering interferons and interleukins for cancer immunotherapy", ADVANCED DRUG DELIVERY REVIEWS, vol. 182, 2022, pages 114112, XP093022598, DOI: 10.1016/j.addr.2022.114112
HOLLINGER ET AL., PROC. NATL. ACAD. SCI. USA, vol. 90, 1993, pages 6444 - 6448
JAZAYERI, J.A.CARROLL, GJ.: "Fc-Based Cytokines: Prospects for Engineering Superior Therapeutics", BIODRUGS, vol. 22, 2008, pages 11 - 26, XP009148905, DOI: 10.2165/00063030-200822010-00002
KABAT ET AL.: "Sequences of Proteins of Immunological Interest", 1991, U.S. DEPARTMENT OF HEALTH AND HUMAN SERVICES
KLAUSZ, K.PEKAR, L.BOJE, A.S.GEHLERT, C.L.KROHN, S.GUPTA, T.XIAO, Y.KRAH, S.ZAYNAGETDINOV, R.LIPINSKI, B. ET AL.: "Multifunctional NK Cell-Engaging Antibodies Targeting EGFR and NKp30 Elicit Efficient Tumor Cell Killing and Proinflammatory Cytokine Release", THE JOURNAL OF IMMUNOLOGY, vol. 209, 2022, pages 1724 - 1735
KLEIN, C.WALDHAUER, I.NICOLINI, V.G.FREIMOSER-GRUNDSCHOBER, A.NAYAK, T.VUGTS, D.J.DUNN, C.BOLIJN, M.BENZ, J.STIHLE, M. ET AL.: "Cergutuzumab amunaleukin (CEA-IL2v), a CEA-targeted IL-2 variant-based immunocytokine for combination cancer immunotherapy: Overcoming limitations of aldesleukin and conventional IL-2-based immunocytokines", ONCOIMMUNOLOGY, vol. 6, 2017, pages e1277306, XP055489779, DOI: 10.1080/2162402X.2016.1277306
KOHLERMILSTEIN, EUR. J. IMMUNOL., vol. 5, 1976, pages 511 - 519
LIPINSKI BRITTA ET AL: "Generation and engineering of potent single domain antibody-based bispecific IL-18 mimetics resistant to IL-18BP decoy receptor inhibition", MABS, vol. 15, no. 1, 19 July 2023 (2023-07-19), US, XP093122582, ISSN: 1942-0862, Retrieved from the Internet <URL:https://doi.org/10.1080/19420862.2023.2236265> DOI: 10.1080/19420862.2023.2236265 *
LIPINSKI, B.ARRAS, P.PEKAR, L.KLEWINGHAUS, D.BOJE, A.S.KRAH, S.ZIMMERMANN, J.KLAUSZ, K.PEIPP, M.SIEGMUND, V. ET AL.: "NKP46 -specific single domain antibodies enable facile engineering of various potent NK cell engager formats", PROTEIN SCIENCE, 2023
MILSTEIN ET AL., NATURE, vol. 305, 1983, pages 537 - 539
MORAGA, I.WERNIG, G.WILMES, S.GRYSHKOVA, V.RICHTER, C.P.HONG, W.-J.SINHA, R.GUO, F.FABIONAR, H.WEHRMAN, T.S. ET AL.: "Tuning Cytokine Receptor Signaling by Reorienting Dimer Geometry with Surrogate Ligands", CELL, vol. 160, 2015, pages 1196 - 1208, XP029203787, DOI: 10.1016/j.cell.2015.02.011
MURER, P.NERI, D.: "Antibody-cytokine fusion proteins: A novel class of biopharmaceuticals for the therapy of cancer and of chronic inflammation", NEW BIOTECHNOLOGY, vol. 52, 2019, pages 42 - 53, XP085726498, DOI: 10.1016/j.nbt.2019.04.002
NAKAMURA, K.BALD, T.SMYTH, M.J.: "Cancer-killing, decoy-resistant interleukin-18", IMMUNOLOGY & CELL BIOLOGY, vol. 98, 2020, pages 434 - 436
NERI, D.SONDEL, P.M.: "Immunocytokines for cancer treatment: past, present and future", CURRENT OPINION IN IMMUNOLOGY, vol. 40, 2016, pages 96 - 102, XP029551352, DOI: 10.1016/j.coi.2016.03.006
PEKAR, L.BUSCH, M.VALLDORF, B.HINZ, S.C.TOLEIKIS, L.KRAH, S.ZIELONKA, S.: "Biophysical and biochemical characterization of a VHH-based IgG-like bi- and trispecific antibody platform", MABS, 2020, pages 1812210, XP055927198, DOI: 10.1080/19420862.2020.1812210
PIRES, I.S.HAMMOND, P.T.IRVINE, DJ: "Engineering Strategies for Immunomodulatory Cytokine Therapies: Challenges and Clinical Progress", ADVANCED THERAPEUTICS, vol. 4, 2021, pages 2100035
PLUCKTHUN: "The Pharmacology of Monoclonal Antibodies", vol. 113, 1994, SPRINGER-VERLAG, pages: 269 - 315
PROPPER, D.J.BALKWILL, F.R.: "Harnessing cytokines and chemokines for cancer therapy", NATURE REVIEWS CLINICAL ONCOLOGY, vol. 19, 2022, pages 237 - 253, XP037766705, DOI: 10.1038/s41571-021-00588-9
ROBERTSON, M.J., STAMATKIN, C.W., PELLOSO, D., WEISENBACH, J., PRASAD, N.K., AND SAFA, A.R.: "A Dose-escalation Study of Recombinant Human Interleukin-18 in Combination With Ofatumumab After Autologous Peripheral Blood Stem Cell Transplantation for Lymphoma. ", JOURNAL OF IMMUNOTHERAPY, vol. 41, 2018, pages 151 - 157
ROBERTSON, M.J.KIRKWOOD, J.M.LOGAN, T.F.KOCH, K.M.KATHMAN, S.KIRBY, L.C.BELL, W.N.THURMOND, L.M.WEISENBACH, J.DAR, M.M.: "A Dose-Escalation Study of Recombinant Human Interleukin-18 Using Two Different Schedules of Administration in Patients with Cancer", CLINICAL CANCER RESEARCH, vol. 14, 2008, pages 3462 - 3469
ROBERTSON, M.J.KLINE, J.STRUEMPER, H.KOCH, K.M.BAUMAN, J.W.GARDNER, O.S.MURRAY, S.C.GERMASCHEWSKI, F.WEISENBACH, J.JONAK, Z. ET AL: "A Dose-Escalation Study of Recombinant Human Interleukin-18 in Combination With Rituximab in Patients With Non-Hodgkin Lymphoma", JOURNAL OF IMMUNOTHERAPY, vol. 36, 2013, pages 331 - 341
ROBERTSON, M.J.MIER, J.W.LOGAN, T.ATKINS, M.KOON, H.KOCH, K.M.KATHMAN, S.PANDITE, L.N.OEI, C.KIRBY, L.C. ET AL.: "Clinical and Biological Effects of Recombinant Human Interleukin-18 Administered by Intravenous Infusion to Patients with Advanced Cancer", CLINICAL CANCER RESEARCH, vol. 12, 2006, pages 4265 - 4273
ROTH, L.KRAH, S.KLEMM, J.GUNTHER, R.TOLEIKIS, L.BUSCH, M.BECKER, S.ZIELONKA, S.: "Isolation of Antigen-Specific V-HH Single-Domain Antibodies by Combining Animal Immunization with Yeast Surface Display", METHODS MOL. BIOL., vol. 2070, 2020, pages 173 - 189, XP055971054, DOI: 10.1007/978-1-4939-9853-1_10
SAXTON, R.A.GLASSMAN, C.R.GARCIA, K.C.: "Emerging principles of cytokine pharmacology and therapeutics", NATURE REVIEWS DRUG DISCOVERY, vol. 22, 2023, pages 21 - 37
SIMPKINS, F.FLORES, A.CHU, C.BEREK, J.S.LUCCI, J.MURRAY, S.BAUMAN, J.STRUEMPER, H.GERMASCHEWSKI, F.JONAK, Z. ET AL.: "Chemoimmunotherapy Using Pegylated Liposomal Doxorubicin and Interleukin-18 in Recurrent Ovarian Cancer: A Phase I Dose-Escalation Study", CANCER IMMUNOLOGY RESEARCH, vol. 1, 2013, pages 168 - 178
SIRCAR ET AL., J. IMMUNOL., vol. 186, 2011, pages 6357 - 6367
TARHINI, A.A.MILLWARD, M.MAINWARING, P.KEFFORD, R.LOGAN, T.PAVLICK, A.KATHMAN, S.J.LAUBSCHER, K.H.DAR, M.M.KIRKWOOD, J.M.: "A phase 2, randomized study of SB-485232, rhIL-18, in patients with previously untreated metastatic melanoma", CANCER, vol. 115, 2009, pages 859 - 868, XP071176237, DOI: 10.1002/cncr.24100
TSUTSUMI NAOTAKA ET AL: "The structural basis for receptor recognition of human interleukin-18", NATURE COMMUNICATIONS, vol. 5, no. 1, 15 December 2014 (2014-12-15), XP093078354, Retrieved from the Internet <URL:https://www.nature.com/articles/ncomms6340> DOI: 10.1038/ncomms6340 *
YASUDA, K.NAKANISHI, K.TSUTSUI, H., INTERLEUKIN-18 IN HEALTH AND DISEASE. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, vol. 20, 2019, pages 649
YEN MICHELLE ET AL: "Facile discovery of surrogate cytokine agonists", CELL, ELSEVIER, AMSTERDAM NL, vol. 185, no. 8, 23 March 2022 (2022-03-23), pages 1414, XP087019548, ISSN: 0092-8674, [retrieved on 20220323], DOI: 10.1016/J.CELL.2022.02.025 *
YEN, M.REN, J.LIU, Q.GLASSMAN, C.R.SHEAHAN, T.P.PICTON, L.K.MOREIRA, F.R.RUSTAGI, A.JUDE, K.M.ZHAO, X. ET AL.: "Facile discovery of surrogate cytokine agonists", CELL, vol. 185, 2022, pages 1414 - 1430
ZHENG, X.WU, Y.BI, J.HUANG, Y.CHENG, Y.LI, Y.WU, Y.CAO, G.TIAN, Z.: "The use of supercytokines, immunocytokines, engager cytokines, and other synthetic cytokines in immunotherapy", CELLULAR & MOLECULAR IMMUNOLOGY, vol. 19, 2022, pages 192 - 209, XP037679949, DOI: 10.1038/s41423-021-00786-6
ZHOU, T.DAMSKY, W.WEIZMAN, O.-E.MCGEARY, M.K.HARTMANN, K.P.ROSEN, C.E.FISCHER, S.JACKSON, R.FLAVELL, R.A.WANG, J. ET AL.: "IL-18BP is a secreted immune checkpoint and barrier to IL-18 immunotherapy", NATURE, vol. 583, 2020, pages 609 - 614, XP037200074, DOI: 10.1038/s41586-020-2422-6

Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2025090519A1 (en) * 2023-10-23 2025-05-01 Diagonal Therapeutics Inc. Heteromeric agonistic antibodies to il-18 receptor

Also Published As

Publication number Publication date
CN121666402A (en) 2026-03-13
AU2024286186A1 (en) 2026-01-22

Similar Documents

Publication Publication Date Title
TWI708788B (en) Bispecific antibody
KR20220050971A (en) Novel anti-CD39 antibody
JP2020018298A (en) Antibody constructs against CLDN 18.2 and CD3
JP2023503846A (en) Dual paratopic CD73 antibody
JP7257971B6 (en) Anti-CD40 Antibodies, Antigen-Binding Fragments Thereof, and Medical Uses Thereof
EP3041868A2 (en) Cd70-binding peptides and method, process and use relating thereto
KR20190080934A (en) CD123 and T cell mobilization polypeptides capable of binding to TCR alpha / beta
JP7596263B2 (en) Antibody constructs that bind to 4-1BB and tumor-associated antigens and uses thereof
JP2021533744A (en) Methods for co-expressing and purifying conditionally activated binding proteins
EP4288451A1 (en) Multispecific antibodies having specificity for ror1 and cd3
KR20250057935A (en) Antibodies targeting pdl1 and methods of use thereof
JP2023551981A (en) Multispecific antibodies and antibody combinations
WO2024251983A1 (en) Il-18 mimetics
JP2025157456A (en) Single domain antibodies against CD47 and uses thereof
KR20220116506A (en) multi-specific antibody
US20240287177A1 (en) Vhh-based nkp30 binders
WO2023086897A1 (en) Siglec-6 antibodies, derivative compounds and related uses
WO2022233764A1 (en) Antibodies
US11840568B2 (en) Lymphocyte activation gene-3 (LAG-3) binding antibody and use thereof
TWI917097B (en) Bispecific antibodies and their manufacturing methods
KR20250169614A (en) Optimized CD3 antigen binding domain
KR20250143339A (en) VHH-based NKp46 binders
WO2025172588A1 (en) Bispecific constructs directed against fap and ltbr
HK40088986A (en) Binding molecules that multimerise cd45
HK40078567A (en) Novel conjugate molecules targeting cd39 and tgfβeta

Legal Events

Date Code Title Description
121 Ep: the epo has been informed by wipo that ep was designated in this application

Ref document number: 24732243

Country of ref document: EP

Kind code of ref document: A1

WWE Wipo information: entry into national phase

Ref document number: AU2024286186

Country of ref document: AU

WWE Wipo information: entry into national phase

Ref document number: 2024732243

Country of ref document: EP

NENP Non-entry into the national phase

Ref country code: DE

ENP Entry into the national phase

Ref document number: 2024286186

Country of ref document: AU

Date of ref document: 20240607

Kind code of ref document: A

ENP Entry into the national phase

Ref document number: 2024732243

Country of ref document: EP

Effective date: 20260109

ENP Entry into the national phase

Ref document number: 2024732243

Country of ref document: EP

Effective date: 20260109

ENP Entry into the national phase

Ref document number: 2024732243

Country of ref document: EP

Effective date: 20260109