[0001] Cells are continuously challenged with endogenous and exogenous agents that influence DNA integrity. To maintain genomic stability and prevent unwanted propagation of damaged DNA, cells have established an organized signaling network that recognizes DNA lesions and halts the cell cycle to allow the DNA to be correctly repaired before resuming DNA replication or cell division. The DNA damage response and the cell cycle are tightly linked via several cell cycle checkpoints that are important control steps for maintaining genomic integrity.
[0002] Cancer cells frequently have a defective Gl/S checkpoint, often via disrupted p53 activity due to mutations or deletion, or inactivation by viral oncoproteins. Therefore, cancer cells rely heavily on other cell cycle checkpoints, including the G2/M checkpoint, to avoid accumulation of deleterious DNA damage and mitotic catastrophe. As such, cancer cells are hypothesized to be particularly vulnerable to inhibition of proteins that safeguard the entry into mitosis. Matheson, C. J. et al Trends Pharmacol Sci 37, 872-881 (2016).
[0003] WeelA kinase is a tyrosine kinase belonging to the Weel kinase family, including WeelA kinase, WeelB kinase, and Mytl kinase. Rora, A. G. L. et al J Hematol Oncol 13, 126 (2020). The primary role for this kinase family is to regulate cell cycle progression and entry into mitosis (WeelA kinase and Mytl kinase) or meiosis (WeelB kinase). The key complex regulating mitotic entry is Cdkl/cyclin Bl complex, also known as the mitosispromoting factor. WeelA kinase constrains Cdkl/cyclin Bl complex activity by phosphorylating Cdkl on the inhibitory tyrosine 15 site (Y15). Hence, inhibition of WeelA kinase effectively promotes Cdkl/cyclin Bl complex activity by preventing inhibitory Y15 phosphorylation. Untimely activation of Cdkl/cyclin B complex promotes premature entry into mitosis with unresolved DNA damages, ultimately leading to mitotic catastrophe and cell death.
[0004] In addition to its well-established role in regulating mitotic entry at the G2/M checkpoint, WeelA kinase has also been suggested to be important in the intra-S checkpoint by limiting activity of Cdk2. Elbaek, C. R. et al Cell Reports 38, 110261 (2022); Elbaek, C. R. et al Mutat Res Fundam Mol Meeh Mutagen 819-820, 111694 (2020). The activity of Cdk2 is regulated by WeelA kinase in the same way as Cdkl by tyrosine 15 phosphorylation. Cdk2 is the primary Cdk driving DNA replication and inhibition of WeelA kinase leads to excessive
DNA replication, leading to exhaustion of nucleotide pools and degradation of the ribonucleotide reductase subunit RRM2 (Pfister, S. X. et al Cancer Cell 28, 557-568 (2015)). Pfister et al. showed that Wee1A kinase inhibition selectively kills H3K36me3-deficient cancer cells through dNTP starvation resulting from RRM2 depletion. The histone methyl transferase SETD2 catalyzes H3K36me3, which promotes RRM2 expression and synthesis of dNTPs. Inactivation of SETD2 gene is frequent in clear cell renal carcinomas (ccRCC) and might therefore be sensitive to Wee1A kinase inhibition. A phase II trial is testing AZD1775 in SETD2-deficient solid tumors (NCT03284385). [0005] Wee1A kinase has also been suggested to have a role in controlling histone stoichiometry by phosphorylation of core histone H2B at tyrosine 37 at late S phase. Koh, S.- B. Cell Signal 94, 110310 (2022). [0006] Cancers associated with high-risk human papilloma virus (HPV) such as head and neck squamous cell carcinoma (HNSCC) showed increased sensitivity to Wee1A kinase inhibition. Diab, A. et al Proc National Acad Sci 117, 28287-28296 (2020). [0007] Several Wee1A kinase inhibitors are currently being tested in clinical trials (Bukhari, A. B. et al Frontiers Oncol 12, 828684 (2022) and have shown activity in many indications. A phase II study of the Wee1A kinase inhibitor AZD1775 (adavosertib) has shown promising results in women with uterine serous carcinoma. Liu, J. F. et al J Clin Oncol 39, 1531-1539 (2021). Adavosertib has also shown effect compared to active monitoring in RAS/TP53 mutated metastatic colorectal cancer. Seligmann, J. F. et al J Clin Oncol 39, 3705-3715 (2021). In a phase 1b trial of 18 patients with platinum-resistant ovarian cancer, the combination of ZN-c3 (azenosertib) plus paclitaxel led to an ORR of 50% (J Clin Oncol 41, 2023 (suppl 16; abstr 5513)). Given the encouraging signs of clinical activity with Wee1A kinase inhibition, there is an urgent need for novel Wee1A kinase inhibitors with improved potency and selectivity, as well as for compounds that inhibit both Wee1A kinase and Myt1 kinase to maximize the efficacy potential of this target class.

[0201] tert-butyl 4-((6-bromopyridin-2-yl)oxy)piperidine-1-carboxylate [0202] Sodium hydride was added to a stirred solution of tert-butyl 4-hydroxypiperidine- 1-carboxylate (1 equivalent) in tetrahydrofuran (0.5 mol/mL) at 0 °C. A solution of 2,6- dibromopyridine (1 equivalent) in THF (0.5 mol/mL) was added to the mixture, upon complete addition the mixture was brought to room temperature and stirred until LCMS indicated full conversion, typically overnight. The reaction mixture was concentrated, diluted with brine and aq. NaHCO3 (sat.) and extracted with ethyl acetate (×3). The organic layer was washed with brine and then filtered through a phase-separator. The organic layer was concentrated to residues under reduced pressure. The residues were purified by flash chromatography. [0203] tert-butyl 4-((6-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [0204] CuI (1.2 equivalents) followed by N,N’-dimethylethylenediamine (1 equivalent) was added to a stirred degassed suspension of tert-butyl 4-((6-bromopyridin-2- yl)oxy)piperidine-1-carboxylate (1 equivalent), 6-(methylsulfanyl)-2-(prop-2-en-1-yl)- 1H,2H,3H-pyrazolo[3,4-d]pyrimidin-3-one (1 equivalent), and cesium carbonate (3 equivalents) in dioxane (0.3 mol/L) at room temperature. The reaction was heated to 90 °C in a closed vial overnight. The reaction was diluted with water and a few drops of aq. ammonia (28%) then extracted with ethyl acetate (×3). The combined organic layers were dried using a phase-separator and concentrated under reduced pressure giving an oil. This material that was either used without further purification or purified by flash chromatography.
[0205] 2-allyl-6-((4-chlorophenyl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 141) [0206] mCPBA (~75%, 1.2 equivalents) was added to a stirred solution of tert-butyl 4- ((6-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2- yl)oxy)piperidine-1-carboxylate (1 equivalent) in dichloromethane (0.4 mol/L) at room temperature. The mixture was stirred until LCMS indicated full conversion into the corresponding sulfoxide (major) and sulfone (minor), typically within 1 hour. [0207] 1-amino-4-chlorobenzene (1 equivalent) was added to the reaction mixture and the resulting mixture was heated to 40 °C until LCMS indicated full conversion, typically overnight. Alternatively, dichloromethane was removed under reduced pressure and the residues redissolved in dry acetonitrile (0.6 mol/L). Then 1-amino-4-chlorobenzene (1 equivalent) was added and the resulting mixture was heated to 60 °C until LCMS indicated full conversion, typically overnight. The reaction mixture was concentrated, the residues were diluted with ethyl acetate, aq. NaOH (1 M) was added, and the product was extracted with ethyl acetate (×3). The combined organic layers were dried using a phase-separator and concentrated under reduced pressure to residues. [0208] Trifluoroacetic acid (10-20% by volume) was added to a stirred solution of the material above (1 equivalent) in dry dichloromethane (0.4 mol/L) at room temperature. The resulting solution was stirred until LCMS indicated full conversion, typically within 1 hour. The reaction mixture was concentrated and purified using reversed phase chromatography. The pure fractions were pooled and lyophilized to give Compound 141. Yield: 15 mg, 31% as solids. HPLC purity (220 nm) 98%. [0209] 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2- yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 142) [0210] Formaldehyde (38% in water, 2 equivalents) was added to a stirred a solution of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one (1 equivalent) in THF (0.6 mol /L) at room temperature. Diisopropylethylamine (1 equivalent) was added if the starting material was in the form of a trifluoroacetic acid salt. The reaction mixture was stirred for 30 minutes then sodium triacetoxyborohydride (3 equivalents) was added in portions at room temperature. This mixture was stirred until LCMS indicated full conversion in some instances this required addition of more formaldehyde and sodium triacetoxyborohydride. The reaction mixture was concentrated and purified by reversed phase chromatography. The pure fractions were pooled
and lyophilized to give Compound 142. Yield: 42 mg, 63% as solids. HPLC purity (220 nm) 97%. [0211] Example 3. Synthesis of 1‐{6‐[(3R)‐1‐azabicyclo[2.2.2]octan‐3‐yloxy]pyridin‐ 2‐yl}‐6‐[(1‐methyl‐1H‐pyrazol‐4‐yl)amino]‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐ d]pyrimidin‐3‐one; trifluoroacetic acid (TFA salt of Compound 172)

[0212] (R)-3-((6-bromopyridin-2-yl)oxy)quinuclidine [0213] N,N-Diisopropylethylamine (3 equivalents) and (R)-quinuclidin-3-ol (1 equivalent) were added to a solution of 2,6-dibromopyridine (1 equivalent) in DMSO (0.8 mol/L) at room temperature. The reaction mixture was heated to 90 °C and stirred for several days until LCMS indicated full conversion. The reaction mixture was diluted with brine and aq. NaHCO3 (sat.) and extracted with ethyl acetate (×3). The combined organic layers were dried using a phase-separator and concentrated under reduced pressure giving an oil. This material that was either used without further purification or purified by flash chromatography. [0214] Alternatively, cesium carbonate (3 equivalents) and (R)-quinuclidin-3-ol (1 equivalent) were added to a solution of 2,6-dibromopyridine (1 equivalent) in dry dimethyl formamide (0.4 mol/L) and stirred at 100 °C until LCMS indicated full conversion, typically overnight. The reaction mixture was diluted with brine and aq. NaHCO3 (sat.) and extracted with ethyl acetate (×3). The combined organic layers were dried using a phase-separator and concentrated under reduced pressure giving an oil. This material that was either used without further purification or purified by flash chromatography.
[0215] (R)-2-allyl-6-(methylthio)-1-(6-(quinuclidin-3-yloxy)pyridin-2-yl)-1,2-dihydro- 3H-pyrazolo[3,4-d]pyrimidin-3-one [0216] CuI (1.2 equivalents) followed by N,N’-dimethylethylenediamine (1 equivalent) was added to a stirred degassed suspension of (R)-3-((6-bromopyridin-2-yl)oxy)quinuclidine (1 equivalent), 6-(methylsulfanyl)-2-(prop-2-en-1-yl)-1H,2H,3H-pyrazolo[3,4-d]pyrimidin-3- one (1 equivalent), and cesium carbonate (3 equivalents) in dioxane (0.3 mol/L) at room temperature. The reaction was heated to 90 °C in a closed vial overnight. The reaction was diluted with water and a few drops of aq. ammonia (28%) then extracted with ethyl acetate (×3). The combined organic layers were dried using a phase-separator and concentrated under reduced pressure giving an oil. This material that was either used without further purification or purified by flash chromatography. [0217] (R)-2-allyl-6-((1-methyl-1H-pyrazol-3-yl)amino)-1-(6-(quinuclidin-3- yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 172) [0218] mCPBA (~75%, 1.2 equivalents) was added to a stirred solution of methanesulfonic acid (2 equivalents) and (R)-2-allyl-6-(methylthio)-1-(6-(quinuclidin-3- yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (1 equivalent) in dichloromethane (0.6 mol/L) at room temperature. The mixture was stirred until LCMS indicated full conversion into the corresponding sulfoxide (major) and sulfone (minor), typically within 1 hour. [0219] 1-methyl-1H-pyrazol-4-amine (1 equivalent) was added to the reaction mixture and the resulting mixture was heated to 40 °C until LCMS indicated full conversion, typically overnight. Alternatively, dichloromethane was removed under reduced pressure and the residues redissolved in dry acetonitrile (0.6 mol/L). Then 1-methyl-1H-pyrazol-4-amine (1 equivalent) was added and the resulting mixture was heated to 60 °C until LCMS indicated full conversion, typically overnight. The mixture was concentrated to dryness under reduced pressure and purified by reversed phase chromatography. The pure fractions were pooled and lyophilized to give product. Yield: 53 mg, 38% as yellow solid. HPLC purity (220 nm) 98%. [0220] Other compounds of the disclosure were or can be synthesized by using the synthetic routes described in Examples 1-3, utilizing one or more of the following: a different reactive aromatic ring for the starting 2,6-dibromopyridine, a different amine in Step 1A, a different alcohol in Step 1B, or a different aromatic ring amine in Step 3A or 3B. Those of ordinary skill in the medicinal chemistry art will be able to synthesize the compounds of this disclosure without undue experimentation by adapting the disclosed examples.
[0221] Example 4. Synthesis of 2-allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4- piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 370) [0222] tert-butyl 4-{6-[6-(4-bromophenylamino)-3-oxo-2-(prop-2-enyl)-1,2-dihydro-3H- 1,2,5,7-tetraazainden-1-yl]pyrid-2-yloxy}piperidine-1-carboxylate [0223] mCPBA (<77% pure) (83.1 mg, assumed 0.481 mmol) in DCM (0.5 mL) was added to a stirred solution of tert-butyl 4-{6-[2-allyl-6-(methylthio)-3-oxo-1,2-dihydro-3H- 1,2,5,7-tetraazainden-1-yl]-2-pyridyloxy}-1-piperidinecarboxylate (200 mg, 0.401 mmol) in DCM (5 mL) at room temperature under nitrogen. The reaction was controlled by LCMS. After 15 min, DCM was removed in vacuo, and the crude solubilized in MeCN (5 ml), then p-bromoaniline (69 mg, 0.401 mmol) was added. The reaction mixture stirred at 60 °C in a closed vial. After 96 h, the reaction mixture was allowed to cool to RT, and mCPBA quenched with 1M NaOH (5 mL) which was added dropwise. The aqueous phase was extracted with EtOAc (3x20 mL) then washed with brine (20 mL). The combined organic layers were dried (MgSO4) and concentrated under reduced pressure to give the product as a yellow powder. The crude material was dissolved in DCM (5 ml), loaded onto a 10 g silica column and purified by flash chromatography (0- 100%, EtOAc: PE) to give tert-butyl 4-{6- [6-(4-bromophenylamino)-3-oxo-2-(prop-2-enyl)-1,2-dihydro-3H-1,2,5,7-tetraazainden-1- yl]pyrid-2-yloxy}piperidine-1-carboxylate [180 mg, 59%] as a pale-yellow solid. [0224] 6-(4-bromophenylamino)-1-[6-(piperid-4-yloxy)pyrid-2-yl]-2-(prop-2-enyl)-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one [0225] A solution of tert-butyl 4-{6-[6-(4-bromophenylamino)-3-oxo-2-(prop-2-enyl)- 1,2-dihydro-3H-1,2,5,7-tetraazainden-1-yl]pyrid-2-yloxy}piperidine-1-carboxylate (150 mg, 0.236 mmol) in DCM (5 mL) was treated with TFA (2 mL) for 2 h. The solvent was removed in vacuo and the crude was dissolved in EtOAc, washed with sat aq NaHCO3, brine, dried (MgSO
4), and concentrated. The resulting material was purified by reversed phase chromatography (Gemini NX-C18,21*150 mm, water (0.1% TFA)/acetonitrile, gradient over 12 minutes, 25 ml/min). The pure fractions were pooled and concentrated giving 6-(4- bromophenylamino)-1-[6-(piperid-4-yloxy)pyrid-2-yl]-2-(prop-2-enyl)-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one as a white solid. [ 150 mg]. [0226] 6-(4-bromophenylamino)-1-[6-(1-methylpiperid-4-yloxy)pyrid-2-yl]-2-(prop-2- enyl)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 370) [0227] 6-(4-bromophenylamino)-1-[6-(piperid-4-yloxy)pyrid-2-yl]-2-(prop-2-enyl)-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one (150 mg, 0.236 mmol) was dissolved in anhydrous THF (5 mL). Formaldehyde (~ 36% pure, 38.3 µL, 0.471 mmol) and STAB (150 mg, 0.707
mmol) were added in that order. The reaction mixture was stirred at room temperature while monitored by LCMS. After 2 h, the reaction was quenched with saturated aqueous sodium bicarbonate (5 mL) which was added dropwise. The aqueous phase was extracted with EtOAc (3x20 mL). The combined organic layers were dried (MgSO
4) and concentrated under reduced pressure to give the crude material as a yellow powder. The resulting material was purified by reversed phase chromatography (Gemini NX-C18,21*150 mm, water (0.1% TFA)/acetonitrile, gradient over 12 minutes, 25 ml/min). The pure fractions were pooled and concentrated giving the title compound [50.9 mg, yield 33.2 %]. [0228] Example 5. Synthesis of 2-ethyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-6- [m-(5-pyrimidinyl)phenylamino]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 367) [0229] tert-butyl 4-{6-[6-(3-bromophenylamino)-2-ethyl-3-oxo-1,2-dihydro-3H-1,2,5,7- tetraazainden-1-yl]-2-pyridyloxy}-1-piperidinecarboxylate [0230] This intermediate was prepared by the same method as tert-butyl 4-{6-[6-(4- bromophenylamino)-3-oxo-2-(prop-2-enyl)-1,2-dihydro-3H-1,2,5,7-tetraazainden-1-yl]pyrid- 2-yloxy}piperidine-1-carboxylate. [0231] 2-ethyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-6-[m-(5- pyrimidinyl)phenylamino]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 367) [0232] To a stirred solution of tert-butyl 4-{6-[6-(3-bromophenylamino)-2-ethyl-3-oxo- 1,2-dihydro-3H-1,2,5,7-tetraazainden-1-yl]-2-pyridyloxy}-1-piperidinecarboxylate (230 mg, 376 µmol) in a mixture of l,4-dioxan (7 mL) and water (2 mL), 2M K
2CO
3 (600 µl) and hydroxy(5-pyrimidinyl)boranolate (46.6 mg, 376 µmol)were added. The reaction mass was degassed for 15 minutes. Iron bis[2-(diphenylphosphino)-2,4-cyclopentadien-1-ide]— dichloro-palladamethane (33 mg, 0.12 eq., 45.1 µmol) as was added and the screw cap was tightened on the seal tube. The contents were heated to 100 °C and stirred over night. The reaction mass was cooled to RT, diluted with EtOAc, washed with water followed by brine solution. The organic layer was dried over anhydrous Na2SO4 and the solvent was removed under reduced pressure to obtain a crude mass. The collected material (150 mg) was dissolved in DCM:TFA 4:1 v/v .The reaction mixture was stirred at room temperature for 1 h. The mixture was concentrated in vacuo and the residue was dissolved in anhydrous THF(5 mL). Formaldehyde (23.4 µL, 2 eq., 314 µmol) and sodium triacetoxyborohydride (99.8 mg, 3 eq., 471 µmol) were added in that order. The reaction mixture was stirred at room temperature while monitored by LCMS. After 2 h, the reaction was quenched with saturated aqueous sodium bicarbonate (5 mL) which was added dropwise. The aqueous phase was
extracted with ethyl acetate (3x20 mL). The combined organic layers were poured through a phase separator and concentrated under reduced pressure to give the product as a brown-red powder. The resulting material was purified by reverse phase chromatography (Gemini NX- C18,21*150 mm, water (0.1% TFA)/acetonitrile, gradient over 12 minutes, 25 ml/min). The pure fractions were pooled and concentrated giving the title compound. [0233] Example 6. Synthesis of 2-ethyl-1-[6-(4-piperidyloxy)-2-pyridyl]-6-[m-(5- pyrimidinyl)phenylamino]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 366) [0234] This compound was made using a similar method as described in the synthesis of 2-ethyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-6-[m-(5-pyrimidinyl)phenylamino]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one. [0235] Example 7. Synthesis of 2-allyl-6-[m-(1-imidazolyl)phenylamino]-1-[6-(1- methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 365) [0236] tert-Butyl 4-(6-{2-allyl-6-[m-(1-imidazolyl)phenylamino]-3-oxo-1,2-dihydro-3H- 1,2,5,7-tetraazainden-1-yl}-2-pyridyloxy)-1-piperidinecarboxylate [0237] mCPBA (<77% pure) (112 mg, assumed 0.493 mmol) in DCM (0.5 mL) was added to a stirred solution of tert-butyl 4-{6-[2-allyl-6-(methylthio)-3-oxo-1,2-dihydro-3H- 1,2,5,7-tetraazainden-1-yl]-2-pyridyloxy}-1-piperidinecarboxylate (205 mg, 0.411 mmol) in DCM (5 mL) at room temperature under nitrogen. After 15 min, DCM was evaporate in vacuo, and the crude solubilized in MeCN (5 ml) Then m-(1-imidazolyl)aniline (65.5 mg, 0.411 mmol) and methane sulfonic acid (79 mg, 0.822 mmol) were added. The reaction mixture stirred at 60 °C in a closed vial. After 48 h, the reaction mixture was allowed to cool to RT, and mCPBA quenched with 1M NaOH (5 mL) which was added dropwise. The aqueous phase was extracted with EtOAc (3x20 mL) then washed with brine (20 mL). The combined organic layers were dried (MgSO4) and concentrated under reduced pressure to give the product as a yellow powder. The crude material was dissolved in DCM (5 ml), loaded onto a 10 g silica column and purified by flash chromatography (0- 100%, EtOAc: PE) to give tert-Butyl 4-(6-{2-allyl-6-[m-(1-imidazolyl)phenylamino]-3-oxo-1,2-dihydro-3H- 1,2,5,7-tetraazainden-1-yl}-2-pyridyloxy)-1-piperidinecarboxylate [160 mg, 62.7 %] as a yellow solid. [0238] 2-allyl-6-[m-(1-imidazolyl)phenylamino]-1-[6-(4-piperidyloxy)-2-pyridyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one, trifluoroacetic acid salt
[0239] A solution of tert-Butyl 4-(6-{2-allyl-6-[m-(1-imidazolyl)phenylamino]-3-oxo- 1,2-dihydro-3H-1,2,5,7-tetraazainden-1-yl}-2-pyridyloxy)-1-piperidinecarboxylate (160 mg, 0.307mmol) in DCM (5 mL) was treated with TFA (2 mL) for 2 h. The solvent was removed in vacuo and the crude was dissolved in EtOAc, washed with sat aq NaHCO
3, brine, dried (MgSO4), and concentrated. The resulting material was purified by purified phase chromatography (Gemini NX-C18,21*150 mm, water (0.1% TFA)/acetonitrile, gradient over 12 minutes, 25 ml/min). The pure fractions were pooled and concentrated giving 2-allyl-6- [m-(1-imidazolyl)phenylamino]-1-[6-(4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7- tetraazainden-3-one as a trifluoroacetic acid salt as a white solid [ 150 mg]. [0240] 2-allyl-6-[m-(1-imidazolyl)phenylamino]-1-[6-(1-methyl-4-piperidyloxy)-2- pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one, trifluoroacetic acid salt (Compound 365) [0241] 2-allyl-6-[m-(1-imidazolyl)phenylamino]-1-[6-(1-methyl-4-piperidyloxy)-2- pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (150 mg, 0.296 mmol) was dissolved in anhydrous THF (5 mL). Formaldehyde (~ 36% pure, 44 µL, 0.591 mmol) and STAB (188 mg, 0.887 mmol) were added in that order. The reaction mixture was stirred at room temperature while monitored by LCMS. After 2 h, the reaction was quenched with saturated aqueous sodium bicarbonate (5 mL) which was added dropwise. The aqueous phase was extracted with EtOAc (3x20 mL). The combined organic layers were dried (MgSO
4) and concentrated under reduced pressure to give the crude material as a yellow powder. The resulting material was purified by reversed phase chromatography (Gemini NX-C18,21*150 mm, water (0.1% TFA)/acetonitrile, gradient over 12 minutes, 25 ml/min). The pure fractions were pooled and concentrated giving 2-allyl-6-[m-(1-imidazolyl)phenylamino]-1-[6-(1- methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one as a trifluoroacetic acid salt [26.9 mg, yield 28 %]. [0242] Example 8. Synthesis of 2-allyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-6- [m-(1-pyrazolyl)phenylamino]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 364) [0243] tert-butyl 4-(6-{3-oxo-2-(prop-2-enyl)-6-[3-(pyrazol-1-yl)phenylamino]-1,2- dihydro-3H-1,2,5,7-tetraazainden-1-yl}pyrid-2-yloxy)piperidine-1-carboxylate [0244] mCPBA (<77% pure) (114 mg, assumed 0.493 mmol) in DCM (0.5 mL) was added to a stirred solution of tert-butyl 4-{6-[2-allyl-6-(methylthio)-3-oxo-1,2-dihydro-3H- 1,2,5,7-tetraazainden-1-yl]-2-pyridyloxy}-1-piperidinecarboxylate (205 mg, 0.411 mmol) in DCM (5 mL) at room temperature under nitrogen. After 15 min, DCM was evaporated in
vacuo, and the crude solubilized in MeCN (5 ml). Then m-(1-pyrazolyl)aniline (65.4 mg, 0.411 mmol) and methane sulfonic acid (79 mg, 0.822 mmol) were added. The reaction mixture stirred at 60 °C in a closed vial. After 48 h, the reaction mixture was allowed to cool to RT, and mCPBA quenched with 1M NaOH (5 mL) which was added dropwise. The aqueous phase was extracted with EtOAc (3x20 mL) then brine 20 mL. The combined organic layers were dried (MgSO
4) and concentrated under reduced pressure to give the product as a yellow powder. The crude material was dissolved in DCM (5 ml), loaded onto a 10 g silica column and purified by flash chromatography (0- 100%, EtOAc: PE) to give tert- butyl 4-(6-{3-oxo-2-(prop-2-enyl)-6-[3-(pyrazol-1-yl)phenylamino]-1,2-dihydro-3H-1,2,5,7- tetraazainden-1-yl}pyrid-2-yloxy)piperidine-1-carboxylate [140 mg, 58.5 %] as a white solid. [0245] 2-allyl-1-[6-(4-piperidyloxy)-2-pyridyl]-6-[m-(1-pyrazolyl)phenylamino]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one, trifluoroacetic acid salt [0246] A solution of tert-butyl 4-(6-{3-oxo-2-(prop-2-enyl)-6-[3-(pyrazol-1- yl)phenylamino]-1,2-dihydro-3H-1,2,5,7-tetraazainden-1-yl}pyrid-2-yloxy)piperidine-1- carboxylate (140 mg, 0.275 mmol) in DCM (5 mL) was treated with TFA (2 mL) for 2 h. The solvent was removed in vacuo and the crude was dissolved in EtOAc, washed with sat aq NaHCO
3, brine, dried (MgSO
4), and concentrated. The resulting material was purified by reversed phase chromatography (Gemini NX-C18,21*150 mm, water (0.1% TFA)/acetonitrile, gradient over 12 minutes, 25 ml/min). The pure fractions were pooled and concentrated giving 2-allyl-1-[6-(4-piperidyloxy)-2-pyridyl]-6-[m-(1- pyrazolyl)phenylamino]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one as a trifluoroacetic acid salt as a white solid [140 mg]. [0247] 2-allyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-6-[m-(1- pyrazolyl)phenylamino]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 364) [0248] 2-allyl-1-[6-(4-piperidyloxy)-2-pyridyl]-6-[m-(1-pyrazolyl)phenylamino]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one (140 mg, 0.275 mmol) was dissolved in anhydrous THF (5 mL). Formaldehyde (~ 36% pure, 40.9 µL, 0.549 mmol) and STAB (175mg, 0.824 mmol) were added in that order. The reaction mixture was stirred at room temperature while monitored by LCMS. After 2 h, the reaction was quenched with saturated aqueous sodium bicarbonate (5 mL) which was added dropwise. The aqueous phase was extracted with EtOAc (3x20 mL). The combined organic layers were dried (MgSO4) and concentrated under reduced pressure to give the crude material as a yellow powder. The resulting material was purified by reversed phase chromatography (Gemini NX-C18,21*150 mm, water (0.1% TFA)/acetonitrile, gradient over 12 minutes, 25 ml/min). The pure fractions were pooled and
concentrated giving 2-allyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-6-[m-(1- pyrazolyl)phenylamino]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one [25 mg, yield 27 %]. [0249] Example 9. Synthesis of 2-allyl-1-[6-(4-piperidyloxy)-2-pyridyl]-6-[m-(1- pyrazolyl)phenylamino]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 363) [0250] This compound was made using a similar method as described in the synthesis of 2-allyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-6-[m-(1-pyrazolyl)phenylamino]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one. [0251] Example 10. Synthesis of 2-allyl-6-(1-isopropyl-1H-indazol-5-ylamino)-1-(6- {1-[(²H₃)methyl]-4-piperidyloxy}-2-pyridyl)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 354) [0252] Methanol-d4 (31 µl, 0.76 mmol, 4.0 equiv.) and water (2 µl, 0.11 mmol, 0.58 equiv.) were added to a suspension of Dess-Martin periodinane (129 mg, 0.30 mmol, 1.6 equiv.) in DCM (2 ml) at RT and the mixture was stirred for 20 min, after which it was filtered through a 0.45 µm syringe filter. The resulting clear solution of formaldehyde-d2 (1.6 equiv.) was added to a solution of 1‐[6‐(piperidin‐4‐yloxy)pyridin‐2‐yl]‐2‐(prop‐2‐en‐1‐yl)‐6‐ {[1‐(propan‐2‐yl)‐1H‐indazol‐5‐yl]amino}‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one (100 mg, 0.19 mmol, 1.0 equiv.) in THF (3 ml) followed by the addition of sodium triacetoxyborodeuteride (81 mg, 0.38 mmol, 2.0 equiv.) and the mixture was stirred at RT. After 1 h, a second portion of formaldehyde-d2 (0.8 equiv.) prepared in the same way as above, followed by sodium triacetoxyborodeuteride (50 mg, 0.23 mmol, 1.2 equiv.) were added. After additional 1 h, LCMS indicated complete conversion of the secondary amine and the mixture was diluted with EtOAc (30 ml) and washed with NaCl (15% aq.2x30 ml) adjusted to pH 11 with NaOH aq. followed by sat. brine (30 ml), filtered through a phase- separator and concentrated under reduced pressure. The crude material was purified by reversed phase chromatography (Gemini NX-C18, 21*150 mm, water (0.1% TFA)/acetonitrile, gradient over 12 minutes, 25 ml/min) and the pure fractions were lyophilized to give the title compound. Yield: 91 mg TFA salt (73%) as a pale-yellow powder. [0253] Example 11. Synthesis of 6-(4-biphenylylamino)-2-ethyl-1-[6-(1-methyl-4- piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 284) [0254] This compound was made using a similar method as described in the synthesis of 2-ethyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-6-[m-(5-pyrimidinyl)phenylamino]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one.
[0255] Example 12. Synthesis of 2-ethyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-6- [m-(3-pyridyl)phenylamino]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 352) [0256] This compound was made using a similar method as described in the synthesis of 2-ethyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-6-[m-(5-pyrimidinyl)phenylamino]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one. [0257] Example 13. Synthesis of 2-ethyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]- 6-[p-(1-methyl-4-pyrazolyl)phenylamino]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 277) [0258] This compound was made using a similar method as described in the synthesis of 2-ethyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-6-[m-(5-pyrimidinyl)phenylamino]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one. [0259] Example 14. Synthesis of 6-(4-biphenylylamino)-2-ethyl-1-[6-(4- piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 272) [0260] This compound was made using a similar method as described in the synthesis of 2-ethyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-6-[m-(5-pyrimidinyl)phenylamino]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one. [0261] Example 15. Synthesis of 2-ethyl-6-[p-(1-methyl-4-pyrazolyl)phenylamino]-1- [6-(4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 271) [0262] This compound was made using a similar method as described in the synthesis of 2-ethyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-6-[m-(5-pyrimidinyl)phenylamino]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one. [0263] Example 16. Synthesis of 2-allyl-6-(m-bromophenylamino)-1-[6-(1-methyl-4- piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 269) [0264] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one. [0265] Example 17. Synthesis of 6-(p-bromophenylamino)-2-ethyl-1-[6-(1-methyl-4- piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 268) [0266] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one.
[0267] Example 18. Synthesis of 6-(p-bromophenylamino)-2-ethyl-1-[6-(4- piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 267) [0268] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one. [0269] Example 19. Synthesis of 2-allyl-6-(1-isopropyl-1H-indazol-5-ylamino)-1-[6- (4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 265) [0270] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one to give the crude free base intermediate (282 mg) as a brown solid of which 9% was purified by prep-HPLC. Yield: 20 mg TFA salt (64%) as a pale- yellow powder. [0271] Example 20. Synthesis of 2-allyl-6-(2-methoxy-4-pyridylamino)-1-[6-(1- methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 263) [0272] tert-butyl 4-(3-(2-allyl-6-amino-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin- 1-yl)phenoxy)piperidine-1-carboxylate [0273] In a flask, was taken tert-butyl 4-(3-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3- dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)phenoxy)piperidine-1-carboxylate (400mg, 0.755 mmol) and added ammonia in THF (5 ml, 5.00 mmol) at rt under inert atmosphere and stirred for 16 h. Progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the solvent was evaporated under reduced pressure to get the crude compound which was purified by column chromatography (silica mesh 100-200 at eluent of 80-100% ethyl acetate and hexane) to get the pure compound tert-butyl 4-(3-(2-allyl-6-amino-3-oxo- 2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)phenoxy)piperidine-1-carboxylate (260 mg, 0.346 mmol, 45.7 % yield) as a brown solid. [0274] 2-allyl-6-(2-methoxy-4-pyridylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]- 1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 263) [0275] CuI (1.2 equivalents) followed by N,N’-dimethylethylenediamine (1 equivalent) was added to a stirred degassed suspension of tert‐butyl 4‐({6‐[6‐amino‐3‐oxo‐2‐(prop‐2‐en‐ 1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐2‐yl}oxy)piperidine‐1‐carboxylate (200 mg), 4-bromo-2-methoxypyridine (1 equivalent), and cesium carbonate (3 equivalents) in dioxane at room temperature. The reaction was heated to 90 °C in a closed vial overnight.
The reactions were monitored by LCMS and additional CuI and ligand were added as needed to achieve full conversion. The reaction was diluted with water and a few drops of aq. ammonia (28%) then extracted with ethyl acetate (×3). The combined organic layers were dried using a phase-separator and concentrated under reduced pressure giving an oil. This material was used without further purification. [0276] Trifluoroacetic acid (10-20% by volume) was added to a stirred solution of the material above (1 equivalent) in dry dichloromethane (0.4 mol/L) at room temperature. The resulting solution was stirred until the Boc-amine intermediate was consumed (15 min, LCMS), then partitioned between EtOAc and sat. brine adjusted to pH ca.12 with aq. NaOH. The organic phase was filtered through a phase-separator and concentrated under reduced pressure to give the crude intermediate as a red solid. Part of this material was purified by reversed phase chromatography (Gemini NX-C18, 21*150 mm, water (0.1% TFA)/acetonitrile, gradient over 12 minutes, 25 ml/min) and the pure fractions were lyophilized to give the amine compound as a TFA salt. [0277] This material was methylated using a method similar as that described for 2-allyl- 6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2-dihydro- 3H-pyrazolo[3,4-d]pyrimidin-3-one. Yield: 178 mg TFA salt (71%) as a pale-yellow powder. [0278] Example 21. Synthesis of 2-allyl-6-(1-methyl-1H-indazol-5-ylamino)-1-[2-(4- piperidyloxy)-4-pyrimidinyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 350) [0279] This compound was made using a similar method as described in the synthesis of 2-allyl-6-(2-methoxy-4-pyridylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one. Yield: 157 mg TFA salt (62%) as a yellow powder. [0280] Example 22. Synthesis of 2-allyl-6-(2-methyl-1,3-benzothiazol-6-ylamino)-1- [6-(4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 264) [0281] This compound was made using a similar method as described in the synthesis of 2-allyl-6-(2-methoxy-4-pyridylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one. Yield: 15 mg TFA salt (61%) as a yellow powder. [0282] Example 23. Synthesis of 2-ethyl-6-[m-(1-methyl-4-pyrazolyl)phenylamino]- 1-[6-(4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 340)
[0283] This compound was made using a similar method as described in the synthesis of 2-ethyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-6-[m-(5-pyrimidinyl)phenylamino]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one. [0284] Example 24. Synthesis of 6-(3-biphenylylamino)-2-ethyl-1-[6-(1-methyl-4- piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 339) [0285] This compound was made using a similar method as described in the synthesis of 2-ethyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-6-[m-(5-pyrimidinyl)phenylamino]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one. [0286] Example 25. Synthesis of 6-(3-biphenylylamino)-2-ethyl-1-[6-(4- piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 338) [0287] This compound was made using a similar method as described in the synthesis of 2-ethyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-6-[m-(5-pyrimidinyl)phenylamino]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one. [0288] Example 26. Synthesis of 2-allyl-6-(2-methyl-1,3-benzothiazol-6-ylamino)-1- [6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 260) [0289] This compound was made using a similar method as described in the synthesis of 2-allyl-6-(2-methoxy-4-pyridylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one. Yield: 65 mg TFA salt (62%) as a pale-yellow powder. [0290] Example 27. Synthesis of 2-allyl-6-(6-methoxy-3-pyridylamino)-1-[6-(4- piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 251) [0291] This compound was made using a similar method as described in the synthesis of 2-allyl-6-(2-methoxy-4-pyridylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one. [0292] Example 28. Synthesis of 2-allyl-6-(6-methoxy-3-pyridylamino)-1-[6-(1- methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 250) [0293] This compound was made using a similar method as described in the synthesis of 2-allyl-6-(2-methoxy-4-pyridylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one. [0294] Example 29. Synthesis of 2-allyl-6-(1,3,3a-triaza-5-indenylamino)-1-[6-(1- methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 249)
[0295] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one. Yield: 26 mg TFA salt (56%) as a pale-yellow powder. [0296] Example 30. Synthesis of 2-allyl-6-(1-isopropyl-1H-indazol-5-ylamino)-1-[6- (1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 248) [0297] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one. Yield: 260 mg TFA salt (81%) as a pale-yellow powder. [0298] Example 31. Synthesis of 2-allyl-6-(1,3,3a-triaza-5-indenylamino)-1-[6-(4- piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 245) [0299] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one. Yield: 53 mg TFA salt (22%) as a yellow powder. [0300] Example 32. Synthesis of 2-allyl-6-(2,1,3-benzothiadiazol-5-ylamino)-1-[6-(1- methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 208) [0301] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one. Yield: 58 mg TFA salt (64%) as a pale-yellow powder. [0302] Example 33. Synthesis of 2-allyl-6-(6-isoquinolylamino)-1-[6-(4-piperidyloxy)- 2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 244) [0303] tert-butyl 4-{6-[2-allyl-6-(6-isoquinolylamino)-3-oxo-1,2-dihydro-3H-1,2,5,7- tetraazainden-1-yl]-2-pyridyloxy}-1-piperidinecarboxylate [0304] Tert-butyl 4-[6-(2-allyl-6-amino-3-oxo-1,2-dihydro-3H-1,2,5,7-tetraazainden-1- yl)-2-pyridyloxy]-1-piperidinecarboxylate (100 mg, 0.214 mmol), 6-bromoisoquinoline (46.4 mg, 0.214 mmol), Cs2CO3 (209 mg, 3 eq.) were mixed and stirred under nitrogen in dioxane (3 mL) for 15 min. A catalytic amount of CuI (48.9 mg, 1.2eq), and 1,2- bis(methylamino)ethane as a ligand (18.9 mg, 0.214 mmol) were added. The reaction mixture was heated up to 90 °C for 18h. The progress of the reaction was observed by LCMS. The reaction mixture was cooled to rt, and the crude residue was quenched with saturated aqueous ammonia solution to remove CuI. Then the mixture was extracted with EtOAc (3 × 10 mL) and brine. The combined organic layers were dried (anhyd. Na2SO4) and the solvent was evaporated under reduced pressure. The crude product was dissolved in MeCN (2 ml) and
crystalized over 1 h by adding slowly water (2 ml). This gave tert-butyl 4-{6-[2-allyl-6-(6- isoquinolylamino)-3-oxo-1,2-dihydro-3H-1,2,5,7-tetraazainden-1-yl]-2-pyridyloxy}-1- piperidinecarboxylate [33 mg, yield 30 %] as an off white solid. LCMS (ESI+), m/z found: 596. [0305] 2-allyl-6-(6-isoquinolylamino)-1-[6-(4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one (Compound 244) [0306] A solution of tert-butyl 4-{6-[2-allyl-6-(6-isoquinolylamino)-3-oxo-1,2-dihydro- 3H-1,2,5,7-tetraazainden-1-yl]-2-pyridyloxy}-1-piperidinecarboxylate (33 mg, 0.055mmol) in DCM (2mL) was treated with TFA (0.5 mL) for 2 h. The solvent was removed in vacuo and the crude was dissolved in EtOAc, washed with sat aq NaHCO
3, brine, dried (MgSO
4), and concentrated. The resulting material was purified by crystallization in MeCN (2 ml) over 1 h by adding slowly water (2 ml). This gave 2-allyl-6-(6-isoquinolylamino)-1-[6-(4- piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one as a yellow solid [30 mg]. [0307] Example 34. Synthesis of 2-allyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-6- (7-quinolylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 335) [0308] This compound was made using a similar method as described in the synthesis of 2-allyl-6-(2-methoxy-4-pyridylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one. [0309] Example 35. Synthesis of 2-allyl-1-[6-(4-piperidyloxy)-2-pyridyl]-6-(6- quinolylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 242) [0310] This compound was made using a similar method as described in the synthesis of 2-allyl-6-(2-methoxy-4-pyridylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one. [0311] Example 36. Synthesis of 2-allyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-6- (6-quinoxalinylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 241) [0312] This compound was made using a similar method as described in the synthesis of 2-allyl-6-(2-methoxy-4-pyridylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one. [0313] Example 37. Synthesis of 2-allyl-6-(7-isoquinolylamino)-1-[6-(4-piperidyloxy)- 2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 240) [0314] This compound was made using a similar method as described in the synthesis of 2-allyl-6-(2-methoxy-4-pyridylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one.
[0315] Example 38. Synthesis of 2-allyl-1-[6-(4-piperidyloxy)-2-pyridyl]-6-(6- quinoxalinylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 239) [0316] This compound was made using a similar method as described in the synthesis of 2-allyl-6-(2-methoxy-4-pyridylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one. [0317] Example 39. Synthesis of 1-{6-[(S)-1-methyl-3-piperidyloxy]-2-pyridyl}-2- allyl-6-(1-methyl-1H-indazol-5-ylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 332) [0318] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one. Yield: 61 mg TFA salt (82%) as a pale-yellow powder. [0319] Example 40. Synthesis of 2-allyl-6-(5-fluoro-3-pyridylamino)-1-[6-(4- piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 329) [0320] This compound was made using a similar method as described in the synthesis of 2-allyl-6-(2-methoxy-4-pyridylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one. Yield: 157 mg TFA salt (62%) as a yellow powder. Yield: 10 mg TFA salt (46%). [0321] Example 41. Synthesis of 6-(1,3a-diaza-5-indenylamino)-2-allyl-1-[6-(1- methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 328) [0322] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one. Yield: 70 mg TFA salt (80%) as a yellow solid. [0323] Example 42. Synthesis of 2-allyl-6-(5-fluoro-3-pyridylamino)-1-[6-(1-methyl- 4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 327) [0324] This compound was made using a similar method as described in the synthesis of 2-allyl-6-(2-methoxy-4-pyridylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one. Yield: 157 mg TFA salt (62%) as a yellow powder. Yield: 125 mg TFA salt (83%) as a yellow solid. [0325] Example 43. Synthesis of 2-allyl-6-(7-isoquinolylamino)-1-[6-(1-methyl-4- piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 326) [0326] This compound was made using a similar method as described in the synthesis of 2-allyl-6-(2-methoxy-4-pyridylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one.
[0327] Example 44. Synthesis of 6-(1,3a-diaza-5-indenylamino)-2-allyl-1-[6-(4- piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 324) [0328] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one. Yield: 100 mg TFA salt (42%). [0329] Example 45. Synthesis of 2-allyl-6-(5-chloro-3-pyridylamino)-1-[6-(1-methyl- 4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 323) [0330] This compound was made using a similar method as described in the synthesis of 2-allyl-6-(2-methoxy-4-pyridylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one. [0331] Example 46. Synthesis of 2-allyl-6-(1-methyl-1H-indazol-5-ylamino)-1-[6-(1- propyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 322) [0332] 2-allyl-6-(1-methyl-1H-indazol-5-ylamino)-1-[6-(4-piperidyloxy)-2-pyridyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one was made with a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one. [0333] Propanol (37.7 µL, 0.502 mmol) was added to a suspension of Dess-Martin periodinane (63.9 mg, 0.151 mmol) in DCM (4 mL) followed by 9 µl H
2O. The mixture was stirred for 30 mins until it became a white suspension which was filtrated.2 ml of the filtered solution was added to a stirred solution at room temperature of 2-allyl-6-(1-methyl-1H- indazol-5-ylamino)-1-[6-(4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3- one (50 mg, 0.1 mmol) in 2 ml THF. STAB (63.9 mg, 0.301 mmol) was added. The mixture was stirred at RT overnight. The mixture was diluted with EtOAc (20 ml) and washed with a mixture of brine made slightly basic with NaOH (2x20 ml). The organic phase was dried through a phase separator and concentrated in vacuo. The crude material was purified with reversed phase chromatography (Gemini NX-C18,21*150 mm, water (0.1% TFA)/acetonitrile, gradient over 12 minutes, 25 ml/min). The pure fractions were pooled and concentrated to give the 2-allyl-6-(1-methyl-1H-indazol-5-ylamino)-1-[6-(1-propyl-4- piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one as a trifluoroacetic acid salt (26 mg).
[0334] Example 47. Synthesis of 2-allyl-1-[6-(1-ethyl-4-piperidyloxy)-2-pyridyl]-6-(1- methyl-1H-indazol-5-ylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 321) [0335] EtOH (29.3 µL, 0.502 mmol) was added to a suspension of Dess-Martin periodinane (63.9 mg, 0.151 mmol) in DCM (4 mL) followed by 9 µl H
2O. The mixture stirred for 30 mins until it becomes a suspension which was filtrated.2 ml of the filtered solution was added to a stirred solution at room temperature of 2-allyl-6-(1-methyl-1H- indazol-5-ylamino)-1-[6-(4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3- one (50 mg, 0.1 mmol) in 2 ml THF. STAB (42.6 mg, 0.201 mmol) was added. The mixture was stirred at RT overnight. The mixture was diluted with EtOAc (20 ml) and washed with a mixture of brine made slightly basic with NaOH (2x20 ml). The organic phase was dried through a phase separator and concentrated in vacuo. The crude material was purified with reversed phase chromatography (Gemini NX-C18,21*150 mm, water (0.1% TFA)/acetonitrile, gradient over 12 minutes, 25 ml/min). The pure fractions were pooled and concentrated to give the 2-allyl-6-(1-methyl-1H-indazol-5-ylamino)-1-[6-(1-propyl-4- piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one as a trifluoroacetic acid salt (25 mg). [0336] Example 48. Synthesis of 2-allyl-6-(1,2-benzisothiazol-5-ylamino)-1-[6-(1- methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 320) [0337] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one. Yield: 58 mg TFA salt (64%) as a pale-yellow powder. [0338] Example 49. Synthesis of 2-allyl-1-[m-(1-methyl-4-piperidyloxy)phenyl]-6-(2- methyl-4-pyridylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 219) [0339] To a stirred solution of 2-allyl-6-((2-methylpyridin-4-yl)amino)-1-(3-(piperidin-4- yloxy)phenyl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (350 mg, 0.765 mmol) in THF (5 ml) was added formaldehyde (310 mg, 3.82 mmol) at 25 °C, then reaction mixture stirred at 25 °C for 5 min. Then STAB (486 mg, 2.295 mmol) was added portion-wise. After the complete addition of STAB, the reaction mixture was stirred at 25 °C for 20 minutes. Progress of the reaction was monitored by TLC and LCMS. Then, the reaction mixture was quenched with TFA, followed by NH
3 in MeOH diluted with water and extracted with 10% MeOH in DCM (2 X 100 mL). The combined organic extracts were washed with NaHCO3,
dried over anhydrous Na
2SO
4, filtered and concentrated under reduced pressure to afford crude compound which was purified by Prep HPLC to get the pure compound 2-allyl-1-(3- ((1-methylpiperidin-4-yl)oxy)phenyl)-6-((2-methylpyridin-4-yl)amino)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one (66 mg, 0.136 mmol, 17.75 % yield) as an off-white solid. [0340] Example 50. Synthesis of 2-allyl-6-(p-fluorophenylamino)-1-[6-(1-methyl-4- azepanyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 317) [0341] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one. [0342] Example 51. Synthesis of 2-allyl-6-(2-methyl-1,3-benzoxazol-5-ylamino)-1-[6- (4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 232) [0343] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one. Yield: 13.5 mg TFA salt (50%) as a yellow powder. [0344] Example 52. Synthesis of 2-allyl-6-(2-methyl-1,3-benzoxazol-6-ylamino)-1-[6- (4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 316) [0345] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one. Yield: 17.6 mg TFA salt (65%) as a yellow powder. [0346] Example 53. Synthesis of 2-allyl-6-(2-methyl-1,3-benzoxazol-5-ylamino)-1-[6- (1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 231) [0347] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one. Yield: 19 mg TFA salt (80%) as a pale-yellow powder. [0348] Example 54. Synthesis of 2-allyl-6-(2-methyl-4-pyridylamino)-1-[m-(4- piperidyloxy)phenyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 222) [0349] tert-butyl 4-(3-bromophenoxy)piperidine-1-carboxylate [0350] To a stirred solution of tert-butyl 4-hydroxypiperidine-1-carboxylate (7.48 g, 37.1 mmol) in DMF (50 ml) was added NaH (2.285 g, 57.1 mmol) at 0 °C under inert atmosphere and stirred for 1 hour at 50 °C. Later, the flask was cooled to room temperature, and 1- bromo-3-fluorobenzene (5 g, 28.6 mmol) was dissolved in DMF (10 ml) and added to the
reaction mass and stirred for 3 h at 70 °C. The progress of the reaction was monitored by LCMS and TLC. After completion of the reaction, the reaction mass was quenched with ice- cold water and extracted with EtOAc (500 mL), The organic layer was washed with brine, dried over anhydrous Na
2SO
4, filtered, and concentrated under reduced pressure to get the crude compound which was purified by column chromatography (silica mesh 100-200 at eluent of 10-20% ethyl acetate and hexane) to give tert-butyl 4-(3-bromophenoxy)piperidine- 1-carboxylate (6.8 g, 14.89 mmol, 52.1 % yield) as yellow gummy liquid. LCMS m/z found: 300.0 (M-56). [0351] N-(6-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1- yl)pyridin-2-yl)-2-cyano-N-methylacetamide [0352] A stirred solution of 2-allyl-6-(methylthio)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (420 mg, 1.890 mmol), tert-butyl 4-(3-bromophenoxy)piperidine-1- carboxylate (808 mg, 2.268 mmol), K2CO3 (783 mg, 5.67 mmol) and N,N′- dimethylethylenediamine (0.203 ml, 1.890 mmol) in dioxane (5 ml) was degassed for 20 minutes at room temperature under inert atmosphere. CuI (359 mg, 1.890 mmol) was added and the mixture again degassed for 5 minutes then stirred for 16 h at 110 °C. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was filtered through celite and washed with 10% MeOH in DCM (150 mL). The collected fractions were concentrated under reduced pressure to get a crude compound which was purified by flash column chromatography (SiO2/230-400 mesh; 20-50% ethyl acetate-pet ether) to give tert-butyl 4-(3-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-1-yl)phenoxy)piperidine-1-carboxylate (65 mg, 0.108 mmol, 5.74 % yield) as an off-white solid. [0353] tert-butyl-4-(3-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-1-yl)phenoxy)piperidine-1-carboxylate [0354] To a stirred solution of tert-butyl 4-(3-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)phenoxy)piperidine-1-carboxylate (60 mg, 0.121 mmol) in DCM (2 ml) was added m-CPBA (41.6 mg, 0.241 mmol). The mixture was stirred for 2 h, at room temperature. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was quenched with sodium bicarbonate solution, then extracted with 10% MeOH in DCM. The organic layer was dried over sodium sulfate, and concentrated under reduced pressure to give the crude tert-butyl-4-(3-(2-allyl-6- (methylsulfonyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)phenoxy)piperidine-
1-carboxylate (60 mg, 0.113 mmol, 94 % yield). This crude compound, as such, is taken for the next step without any further purification. [0355] tert-butyl-4-(3-(2-allyl-6-amino-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin- 1-yl)phenoxy)piperidine-1-carboxylate [0356] In a flask, tert-butyl 4-(3-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)phenoxy)piperidine-1-carboxylate (400mg, 0.755 mmol) was charged and ammonia in THF (5ml, 5.00 mmol)at rt under inert atmosphere and stirred for 16 h. Progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, solvent was evaporated under reduced pressure to get the crude compound which was purified by column chromatography (silica mesh 100-200 at eluent of 80-100% ethyl acetate and hexane) to give tert-butyl 4-(3-(2-allyl-6-amino-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)phenoxy)piperidine-1-carboxylate (260mg, 0.346 mmol, 45.7 % yield) as a brown solid. [0357] tert-butyl-4-(3-(2-allyl-6-((2-methylpyridin-4-yl)amino)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)phenoxy)piperidine-1-carboxylate [0358] A stirred solution of tert-butyl 4-(3-(2-allyl-6-amino-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)phenoxy)piperidine-1-carboxylate (300mg, 0.643 mmol), 4- bromo-2-methylpyridine (133 mg, 0.772 mmol), K2CO3 (267 mg, 1.929 mmol) and N, N'- dimethylethylenediamine (56.6 mg, 0.643 mmol) in dioxane (4 ml) was degassed with N
2 for 30 minutes. To this mixture was added Copper(I) iodide (122 mg, 0.643 mmol) and the mixture again degassed for 5 minutes. The mixture was stirred at 110 °C for 16 h. Progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mass was filtered through celite, and the crude compound was washed with ethyl acetate (100 mL). The combined organic layers were dried over anhydrous Na2SO4, concentrated under vacuum to get the crude compound which was purified by column chromatography (silica mesh 100-200 at eluent of 80-100% ethyl acetate and hexane) to give tert-butyl 4-(3-(2-allyl- 6-((2-methylpyridin-4-yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1- yl)phenoxy)piperidine-1-carboxylate (140 mg, 0.208 mmol, 32.4 % yield) as an off-white solid. LCMS m/z found: 558.5 (M+H). [0359] 2-allyl-6-((2-methylpyridin-4-yl)amino)-1-(3-(piperidin-4-yloxy)phenyl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 222) [0360] To a stirred solution of tert-butyl 4-(3-(2-allyl-6-((2-methylpyridin-4-yl)amino)-3- oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)phenoxy)piperidine-1-carboxylate (40 mg, 0.071 mmol) in dioxane (1 ml) was added HCl in dioxane (0.2 ml, 0.800 mmol) at 0 °C
under inert atmosphere. The mixture was then stirred for 16 h at rt. Progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the solvent was evaporated under reduced pressure to get the crude compound which was washed with n- hexane, and the obtained crude compound was then purified by prep HPLC (Column: X- select CSH C18, Mobile phase A: Water (with 0.1% AA), Mobile phase B: Acetonitrile, Flow rate-15.0 mL/Min, Rt-12.8) to give 2-allyl-6-((2-methylpyridin-4-yl)amino)-1-(3- (piperidin-4-yloxy)phenyl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (14 mg, 0.030 mmol, 42.65 % yield). [0361] Example 55. Synthesis of 2-allyl-1-[6-(4-piperidyloxy)-2-pyridyl]-6-(3- pyridylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 230) [0362] This compound was made using a similar method as described in the synthesis of 2-allyl-6-(2-methoxy-4-pyridylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one. Yield: 93 mg as a white powder. [0363] Example 56. Synthesis of 2-allyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-6- (3-pyridylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 229) [0364] This compound was made using a similar method as described in the synthesis of 2-allyl-6-(2-methoxy-4-pyridylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one. Yield: 96 mg TFA salt (87%) as a pale-yellow powder. [0365] Example 57. Synthesis of 2-allyl-1-[6-(4-azepanyloxy)-2-pyridyl]-6-(p- fluorophenylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 315) [0366] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one. [0367] Example 58. Synthesis of 2-allyl-6-(1,2-benzisothiazol-5-ylamino)-1-[6-(4- piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 228) [0368] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one. [0369] Example 59. Synthesis of 2-allyl-1-[2-(1-methyl-4-piperidylamino)-4- pyrimidinyl]-6-[p-(2,2,2-trifluoroethoxy)phenylamino]-1,2-dihydro-3H-1,2,5,7- tetraazainden-3-one (Compound 314) [0370] This compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2-
dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one. Yield: 49 mg TFA salt (57 %) as a white powder. [0371] Example 60. Synthesis of 2-allyl-6-(1-methyl-1H-indazol-5-ylamino)-1-[2-(1- methyl-4-piperidylamino)-4-pyrimidinyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 313) [0372] This compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one. Yield: 24.5 mg TFA salt (40%) as a yellow powder. [0373] Example 61. Synthesis of 2-allyl-6-(p-fluorophenylamino)-1-[2-(1-methyl-4- piperidylamino)-4-pyrimidinyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 312) [0374] This compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one. Yield: 40 mg TFA salt (54%) as a white powder. [0375] Example 62. Synthesis of 2-allyl-1-[m-(1-methyl-4-piperidyloxy)phenyl]-6-(1- methyl-4-pyrazolylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 221) [0376] tert-butyl 4-(3-(2-allyl-6-((1-methyl-1H-pyrazol-4-yl)amino)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)phenoxy)piperidine-1-carboxylate [0377] To a stirred solution of tert-butyl 4-(3-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3- dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)phenoxy)piperidine-1-carboxylate (80 mg, 0.151 mmol) in acetic acid (3 mL) was added 1-methyl-1H-pyrazol-4-amine (14.67 mg, 0.151 mmol) at 25 °C, then reaction mixture was allowed to stir at 25 °C for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction. The reaction mixture was concentrated under reduced pressure and then diluted with 10% aq. sodium bicarbonate and then extracted with 10% MeOH in DCM. The combined organic layers were dried over anhydrous sodium sulphate, filtered and concentrated under reduced pressure to give crude compound which was purified using column chromatography (silica gel, mesh 100-200 at eluent of 5-10% MeOH in DCM) to give tert-butyl 4-(3-(2-allyl-6-((1- methyl-1H-pyrazol-4-yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1- yl)phenoxy)piperidine-1-carboxylate (60 mg, 0.082 mmol, 54.5 % yield) as an off-white solid. LCMS m/z found: 547.6 (M+1).
[0378] 2-allyl-6-((1-methyl-1H-pyrazol-4-yl)amino)-1-(3-(piperidin-4-yloxy)phenyl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0379] To a stirred solution of tert-butyl 4-(3-(2-allyl-6-((1-methyl-1H-pyrazol-4- yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)phenoxy)piperidine-1- carboxylate (60 mg, 0.110 mmol) in 1,4-dioxane (5 ml) was added 4M HCl (0.329 mL, 1.317 mmol) in dioxane at 0 °C under inert atmosphere. Then the reaction mass was allowed to stir at room temperature for 8 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mass was concentrated under reduced pressure to give the crude compound which was purified by Prep-HPLC (Column: X-select CSH C18, Mobile phase A: Water (with 0.1% FA), Mobile phase B: Acetonitrile (with 0.1% FA), Flow rate-15.0 mL/Min, Rt-12.8) to give 2-allyl-6-((1-methyl-1H-pyrazol-4-yl)amino)- 1-(3-(piperidin-4-yloxy)phenyl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (8 mg, 0.018 mmol, 16 % yield) as a brown solid. [0380] 2-allyl-1-[m-(1-methyl-4-piperidyloxy)phenyl]-6-(1-methyl-4-pyrazolylamino)- 1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 221) [0381] To a stirred solution of 2-allyl-6-((1-methyl-1H-pyrazol-4-yl)amino)-1-(3- (piperidin-4-yloxy)phenyl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (100 mg, 0.224 mmol) in THF (5 mL) was added 37 %, aq formaldehyde (0.083 mL, 1.120 mmol) at 25 °C, and the mixture was stirred for 10 minutes. Then STAB (142 mg, 0.672 mmol) was added portion wise. After complete addition of STAB, the reaction mixture was stirred at 25 °C for 3 h. The progress of reaction was monitored by UPLC. After completion of the reaction, the reaction mixture was quenched with TFA followed by ammonia in MeOH. The reaction mixture was diluted with water and extracted with 10% MeOH in DCM. The combined organic extracts were washed with aq. sodium bicarbonate, dried over anhydrous sodium sulphate, filtered, and concentrated under reduced pressure to afford crude compound which was purified by Prep-HPLC (Column: X-select CSH C18, Mobile Phase A: Ammonium acetate in water, Mobile Phase B: Acetonitrile, Flowrate:15.0mL/Min, Rt-10.8) to give 2- allyl-6-((1-methyl-1H-pyrazol-4-yl)amino)-1-(3-((1-methylpiperidin-4-yl)oxy)phenyl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one. [0382] Example 63. Synthesis of 2-allyl-6-(2-methyl-1,3-benzoxazol-6-ylamino)-1-[6- (1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 311)
[0383] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one. Yield: 184 mg TFA salt (84%) as a pale-yellow powder. [0384] Example 64. Synthesis of 1-{m-[N-methyl(1-methyl-4- piperidyl)amino]phenyl}-2-allyl-6-(1-methyl-1H-indazol-5-ylamino)-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one (Compound 225) [0385] 2-allyl-6-(methylthio)-1-(3-nitrophenyl)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one [0386] To a stirred solution of 2-allyl-6-(methylthio)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (1.2 g, 5.40 mmol) in dichloromethane (15 mL) was added 3-nitrophenyl boronic acid (1.352 g, 8.10 mmol), sodium carbonate (1.707 g, 16.20 mmol) and copper (II) acetate (0.49 g, 2.70 mmol) followed by pyridine (0.169 g, 1.080 mmol) at room temperature. The mixture was heated to 70 °C and stirred for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the mixture was filtered through celite and washed with 10% MeOH in DCM (2 X 100 mL). The combined organic layers were dried over anhydrous Na2SO4, concentrated under reduced pressure to give the crude compound, which was purified by column chromatography (silica mesh 100-200 at eluent of 70-100% Ethyl acetate and hexane) to give 2-allyl-6-(methylthio)-1-(3- nitrophenyl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (700 mg, 1.794 mmol, 33.2 % yield) as a white solid. LCMS m/z found: 344.2 (M+H). [0387] 2-allyl-6-(methylsulfonyl)-1-(3-nitrophenyl)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one [0388] To a stirred solution of 2-allyl-6-(methylthio)-1-(3-nitrophenyl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one (50 mg, 0.146 mmol) in DCM (10 ml) was added mCPBA (53.7 mg, 0.218 mmol) at room temperature under inert atmosphere. The mixture was stirred for 2 h. The progress of the reaction was monitored by TLC and UPLC. After completion of the reaction, the reaction mixture was quenched with aq.10% sodium bicarbonate solution (10 mL) and extracted with 10% MeOH in DCM (2 X 50 mL). The combined organic layers were washed with brine (100 mL), dried over anhydrous sodium sulphate, filtered and concentrated under reduced pressure to give the crude compound 2-allyl-6-(methylsulfonyl)- 1-(3-nitrophenyl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (30 mg, 0.024 mmol, 16.47 % yield) as an off-white solid. This crude compound was taken as such for the next step without further purification.
[0389] 2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(3-nitrophenyl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one [0390] To a stirred solution of 2-allyl-6-(methylsulfonyl)-1-(3-nitrophenyl)-1,2-dihydro- 3H-pyrazolo[3,4-d]pyrimidin-3-one (0.7 g, 2.039 mmol) in AcOH (5 mL) was added 1- methyl-1H-indazol-5-amine (0.3 g, 2.039 mmol) and allowed to stirred for 16 h at room temperature. The progress of the reaction was monitored by TLC and UPLC. After completion of the reaction, the solvent was evaporated under reduced pressure and the residue obtained was quenched with 10% aq sodium bicarbonate solution (100 mL). The resulting mixture was extracted with ethyl acetate (2 X 300 mL). The combined organic extract was washed with brine (100 mL), dried over anhydrous sodium sulphate, filtered and concentrated under reduced pressure to give the crude compound which was purified by column chromatography (silica mesh 100-200 at eluent of 10-20% ethyl acetate and hexane) to give 2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(3-nitrophenyl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one (600 mg, 1.221 mmol, 66.51 % yield) as a yellow solid. [0391] tert-butyl (2-allyl-1-(3-nitrophenyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-6-yl)(1-methyl-1H-indazol-5-yl)carbamate [0392] To a stirred solution of 2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(3- nitrophenyl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (0.2 g, 0.452 mmol) in DCM (5 mL) was added TEA (0.452 mmol) and Boc anhydride (0.148 g, 0.678 mmol). The mixture was stirred at under inert atmosphere for 16 h at room temperature. The progress of the reaction was monitored by TLC and UPLC. After completion of the reaction, the reaction mixture was diluted with water (100 mL) and extracted with ethyl acetate (2X 200 mL). The combined organic layers were washed with brine (100 mL), dried over anhydrous sodium sulphate, filtered and concentrated under reduced pressure to give the compound tert-butyl (2-allyl-1-(3-nitrophenyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-6-yl)(1-methyl- 1H-indazol-5-yl)carbamate (250 mg, 0.424 mmol, 94 % yield) as a white solid. LCMS m/z found: 443.4 (M-100). [0393] tert-butyl (2-allyl-1-(3-aminophenyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-6-yl)(1-methyl-1H-indazol-5-yl)carbamate [0394] To a stirred solution of tert-butyl (2-allyl-1-(3-nitrophenyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-6-yl)(1-methyl-1H-indazol-5-yl)carbamate (250 mg, 0.461 mmol) in EtOH (3.0 mL) and water (10 mL) was added Iron (257 mg, 4.61 mmol) and NH
4Cl (246 mg, 4.61 mmol) and the mixture was allowed to stir for 16 h. The progress of the reaction was monitored by TLC and UPLC. After completion of the reaction, the reaction
mixture was diluted with water (100 mL) and extracted with ethyl acetate (2X 30 mL). The combined organic layers were washed with brine, dried over anhydrous Na
2SO
4, filtered and concentrated under reduced pressure to give the crude compound which was purified by column chromatography (silica gel mesh 100-200, at eluent of 50-80% ethyl acetate in hexane) to give tert-butyl (2-allyl-1-(3-aminophenyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-6-yl)(1-methyl-1H-indazol-5-yl)carbamate (0.150 g, 0.234 mmol, 50.8 % yield) as a brown solid compound. LCMS m/z found: 513.4 (M+H). [0395] tert-butyl-(2-allyl-1-(3-((1-methylpiperidin-4-yl)amino)phenyl)-3-oxo-2,3- dihydro-1H-pyrazolo[3,4-d]pyrimidin-6-yl)(1-methyl-1H-indazol-5-yl)carbamate [0396] To a stirred solution of tert-butyl (2-allyl-1-(3-aminophenyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-6-yl)(1-methyl-1H-indazol-5-yl)carbamate(0.15 g, 0.293 mmol), 1-methylpiperidin-4-one (0.033 g, 0.293 mmol) in dichloroethane (5 mL) was added AcOH (1 mL) under inert atmosphere. The mixture was stirred for 4 h at room temperature and then cooled to 0
oC. STAB (0.311 g, 0.293 mmol) was added and the mixture was allowed to stir for 16 h. The progress of the reaction was monitored by TLC and UPLC. After completion of the reaction, the reaction mixture was diluted with water (100 mL) and extracted with ethyl acetate (2X 100 mL). The combined organic layers were washed with brine (100 mL), dried over anhydrous sodium sulphate, filtered, and concentrated under reduced pressure to get the crude compound which was purified by flash column chromatography (silica mesh 100-200 at eluent of 0-20% MeOH and DCM) to give tert-butyl (2-allyl-1-(3-((1-methylpiperidin-4-yl)amino)phenyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-6-yl)(1-methyl-1H-indazol-5-yl)carbamate (140 mg, 0.204 mmol, 69.8 % yield) as a yellow solid compound. [0397] tert-butyl-(2-allyl-1-(3-(methyl(1-methylpiperidin-4-yl)amino)phenyl)-3-oxo-2,3- dihydro-1H-pyrazolo[3,4-d]pyrimidin-6-yl)(1-methyl-1H-indazol-5-yl)carbamate [0398] To a stirred solution of tert-butyl (2-allyl-1-(3-((1-methylpiperidin-4- yl)amino)phenyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-6-yl)(1-methyl-1H- indazol-5-yl)carbamate (0.130 g, 0.213 mmol) in THF (2 mL) was added NaH (0.012 g, 0.533 mmol) and the mixture was allowed to stir for 30 min at 0
oC under inert atmosphere. Then was added MeI (0.030 g, 0.213 mmol) and the mixture was allowed to stir for 16 h at room temperature. The progress of the reaction was monitored by TLC and UPLC. After completion of the reaction, the reaction mixture was diluted with water (100 mL) and extracted with DCM (2X 100 mL). The combined organic layers were washed with brine (100 mL), dried over anhydrous sodium sulphate, filtered, and concentrated under reduced
pressure to give the crude compound tert-butyl (2-allyl-1-(3-(methyl(1-methylpiperidin-4- yl)amino)phenyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-6-yl)(1-methyl-1H- indazol-5-yl)carbamate (120 mg) as a yellow solid. The crude compound was taken as such for next step without purification. [0399] 2-allyl-1-(3-(methyl(1-methylpiperidin-4-yl)amino)phenyl)-6-((1-methyl-1H- indazol-5-yl)amino)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 225) [0400] To a stirred solution of tert-butyl (2-allyl-1-(3-(methyl(1-methylpiperidin-4-yl) amino) phenyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-6-yl)(1-methyl-1H-indazol- 5-yl)carbamate (90 mg, 0.144 mmol) in DCM (5 mL) was added 4M HCl in 1,4dioxane (0.3 mL, 1.200 mmol) and the mixture was stirred at room temperature for 16 h. The progress of the reaction was monitored by TLC and UPLC. After completion of the reaction, the reaction mixture was concentrated under reduced pressure to get the crude compound which was purified by prep-HPLC (Column: X-select CSH C18, Mobile Phase A: 0.1% Formic acid in water, Mobile Phase B: Acetonitrile, Flowrate:15.0mL/Min, Rt-10.8) to give 2-allyl-1-(3- (methyl(1-methylpiperidin-4-yl)amino)phenyl)-6-((1-methyl-1H-indazol-5-yl)amino)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (7.7 mg, 0.015 mmol, 10.09 % yield) as an off- white solid. [0401] Example 65. Synthesis of 2-allyl-6-(1-methyl-1H-indazol-5-ylamino)-1-[m-(1- methyl-4-piperidyloxy)phenyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 220) [0402] To a stirred solution of 2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(3- (piperidin-4-yloxy)phenyl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (210 mg, 0.423 mmol) in THF (5 mL) was added 37% aq formaldehyde (172 mg, 2.114 mmol) at 25 °C, and resulting mixture was stirred for 10 min. Then STAB (269 mg, 1.269 mmol) was added portion wise. After complete addition of STAB, the reaction mixture was stirred at 25 °C for 16 h. The progress of reaction was monitored by UPLC. After completion of the reaction, the reaction mixture was quenched with TFA followed by ammonia in MeOH. The reaction mixture was diluted with water and extracted with 10% MeOH in DCM. The combined organic extract was washed with aq. sodium bicarbonate, dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to afford crude compound which was purified by Prep-HPLC to give 2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(3-((1- methylpiperidin-4-yl)oxy)phenyl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (21.22 mg, 0.040 mmol, 9.53 % yield) as a white solid.
[0403] Example 66. Synthesis of p-{2-ethyl-1-[6-(1-methyl-4-piperidyloxy)-2- pyridyl]-3-oxo-1,2-dihydro-3H-1,2,5,7-tetraazainden-6-ylamino}benzonitrile (Compound 310) [0404] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one. Yield: 37.1 mg (44%). [0405] Example 67. Synthesis of 2-allyl-6-(1-benzofuran-5-ylamino)-1-[6-(1-methyl- 4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 309) [0406] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one. Yield: 154 mg TFA salt (84%) as a pale-yellow powder. [0407] Example 68. Synthesis of 2-allyl-6-(1-benzofuran-6-ylamino)-1-[6-(1-methyl- 4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 308) [0408] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one. Yield: 114 mg TFA salt (62%) as a pale-yellow powder. [0409] Example 69. Synthesis of 2-allyl-6-(2H-1,3-benzodioxol-5-ylamino)-1-[6-(1- methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 307) [0410] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one. Yield: 130 mg TFA salt (70%) as a pale-yellow powder. [0411] Example 70. Synthesis of m-{2-allyl-1-[6-(1-methyl-4-piperidyloxy)-2- pyridyl]-3-oxo-1,2-dihydro-3H-1,2,5,7-tetraazainden-6-ylamino}benzonitrile (Compound 305) [0412] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one. Yield: 25 mg (27%). [0413] Example 71. Synthesis of 2-allyl-6-(1,3-benzothiazol-6-ylamino)-1-[6-(1- methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 303) [0414] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one. Yield: 19 mg TFA salt (80%) as a pale-yellow powder.
[0415] Example 72. Synthesis of p-{2-ethyl-3-oxo-1-[6-(4-piperidyloxy)-2-pyridyl]- 1,2-dihydro-3H-1,2,5,7-tetraazainden-6-ylamino}benzonitrile (Compound 302) [0416] This compound was made using a similar method as described in the synthesis of 2-allyl-6-(2-methoxy-4-pyridylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one using p-bromobenzonitrile and tert‐butyl 4‐[(6‐{6‐ amino‐2‐ethyl‐3‐oxo‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl}pyridin‐2‐yl)oxy]piperidine‐ 1‐carboxylate. Yield: 7.8 mg (9%). [0417] Example 73. Synthesis of p-{2-allyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]- 3-oxo-1,2-dihydro-3H-1,2,5,7-tetraazainden-6-ylamino}benzonitrile (Compound 301) [0418] This compound was made using a similar method as described in the synthesis of 2-allyl-6-(2-methoxy-4-pyridylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one using p-bromobenzonitrile. [0419] Example 74. p-{2-allyl-3-oxo-1-[6-(4-piperidyloxy)-2-pyridyl]-1,2-dihydro- 3H-1,2,5,7-tetraazainden-6-ylamino}benzonitrile (Compound 300) [0420] 4-{6-[2-allyl-6-(p-cyanophenylamino)-3-oxo-1,2-dihydro-3H-1,2,5,7- tetraazainden-1-yl]-2-pyridyloxy}-1-piperidinecarboxylate [0421] tert-butyl-4-[6-(2-allyl-6-amino-3-oxo-1,2-dihydro-3H-1,2,5,7-tetraazainden-1- yl)-2-pyridyloxy]-1-piperidinecarboxylate (200mg, 0.428 mmol), p-bromobenzonitrile (155.8 mg, 0.856 mmol), Cs
2CO
3 (418 mg, 3equiv) were mixed and stirred under nitrogen in dioxane (5 mL) for 15 min. A catalytic amount of CuI (252.6 mg, 3.1 eq), and 1,2- bis(methylamino)ethane as a ligand (41.5 mg, 0.471 mmol) were added. The reaction mixture was heated up to 90 °C for 48h. The progress of the reaction was observed by LCMS. The reaction mixture was cooled to rt, and the crude residue was quenched with saturated aqueous ammonia solution, then extracted with EtOAc (3 × 10 mL) and washed with brine. The combined organic layers were dried (anhyd. Na
2SO
4) and the solvent was evaporated under reduced pressure. The crude product was dissolved in MeCN (5 ml) and the product made to crystalize over 1h by adding slowly water (5 ml). The pale-brown solid crude material was dissolved in DCM (5 ml), loaded onto a 10 g silica column and purified by flash chromatography (0- 100%, EtOAc: PE) to give tert-butyl 4-{6-[2-allyl-6-(p- cyanophenylamino)-3-oxo-1,2-dihydro-3H-1,2,5,7-tetraazainden-1-yl]-2-pyridyloxy}-1- piperidinecarboxylate [175 mg, yield 72 %] as a yellow solid. [0422] p-{2-allyl-3-oxo-1-[6-(4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7- tetraazainden-6-ylamino}benzonitrile as a trifluoroacetic acid salt (Compound 300)
[0423] A solution of tert-butyl 4-{6-[2-allyl-6-(p-cyanophenylamino)-3-oxo-1,2-dihydro- 3H-1,2,5,7-tetraazainden-1-yl]-2-pyridyloxy}-1-piperidinecarboxylate (175 mg, 0.308mmol) in DCM (3 mL) was treated with TFA (1.5 mL) for 2 h. The solvent was removed in vacuo and the crude was dissolved in EtOAc, washed with sat aq NaHCO
3, brine, dried (MgSO
4), and concentrated. The resulting material was purified by reverse phase chromatography (Gemini NX-C18,21*150 mm, water (0.1% TFA)/acetonitrile, gradient over 12 minutes, 25 ml/min). The pure fractions were pooled and concentrated to give p-{2-allyl-3-oxo-1-[6-(4- piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-6-ylamino}benzonitrile as a trifluoroacetic acid salt as a white solid [ 165 mg]. [0424] Example 75.2-allyl-6-(1,2-benzisoxazol-6-ylamino)-1-[6-(1-methyl-4- piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 299) [0425] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one. Yield: 55 mg (42%) as a white powder. [0426] Example 76.2-allyl-6-(1-methyl-1H-indazol-5-ylamino)-1-[m-(4- piperidyloxy)phenyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 223) [0427] tert-butyl-4-(3-bromophenoxy)piperidine-1-carboxylate [0428] To a stirred solution of tert-butyl 4-hydroxypiperidine-1-carboxylate (7.48 g, 37.1 mmol) in DMF (50 mL) was added NaH (2.285 g, 57.1 mmol) at 0 °C under inert atmosphere, and then this mixture was stirred for 1 h at 50 °C. The reaction mixture was cooled to room temperature and a solution of 1-bromo-3-fluorobenzene (5 g, 28.6 mmol) dissolved in DMF (5 mL) was added. After addition, the reaction mixture was stirred at 70 °C for 3 h. The progress of the reaction was monitored by LCMS and TLC. After completion of the reaction, the reaction mixture was quenched with ice cold water and extracted with ethyl acetate (2X 400 mL). The organic phases were combined and washed with brine (500 mL) and dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to get a crude compound which was purified by column chromatography (silica mesh 100-200 at eluent of 10-20% ethyl acetate and hexane) to give tert-butyl 4-(3-bromophenoxy)piperidine- 1-carboxylate (6.8 g, 14.89 mmol, 52.1 % yield) as yellow gummy liquid. The isolated product was taken as such for next step. [0429] tert-butyl-4-(3-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-1-yl)phenoxy)piperidine-1-carboxylate [0430] A stirred solution of tert-butyl 4-(3-bromophenoxy)piperidine-1-carboxylate (481 mg, 1.350 mmol), 2-allyl-6-(methylthio)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one
(250 mg, 1.125 mmol), K
2CO
3 (466 mg, 3.37 mmol) and N,N′-dimethylethylenediamine (99 mg, 1.125 mmol) in dioxane (10 mL) was degassed for 20 min at room temperature under inert atmosphere. Then CuI (214 mg, 1.125 mmol) was added and the mixture again degassed for 5 min. The reaction mixture was stirred at 100 °C for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was diluted with DCM and filtered through celite pad. The collected organic fraction was concentrated under reduced pressure to get the crude compound which was purified by flash column chromatography (SiO
2/230-400 mesh; 20-50% ethyl acetate-pet ether) to give tert- butyl-4-(3-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1- yl)phenoxy)piperidine-1-carboxylate (80 mg, 0.154 mmol, 13.72 % yield) as an off-white solid. [0431] tert-butyl-4-(3-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-1-yl)phenoxy)piperidine-1-carboxylate [0432] To the stirred solution of tert-butyl 4-(3-(2-allyl-6-(methylthio)-3-oxo-2,3- dihydro-1H-pyrazolo[3,4-d]pyrimidin-1yl)phenoxy)piperidine-1-carboxylate (80 mg, 0.161 mmol) in DCM (5 mL) was added m-CPBA (55.5 mg, 0.322 mmol) at room temperature and the mixture was stirred for 2 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, it was quenched the with sodium bicarbonate solution and then extracted with 10% MeOH in DCM (2X 50 mL). The combined organic layers was dried over sodium sulphate and evaporated under reduced pressure to give tert- butyl 4-(3-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1- yl)phenoxy)piperidine-1-carboxylate (85 mg, 0.053 mmol, 32.9 % yield). This compound was taken as such for the next step without further purification. [0433] tert-butyl-4-(3-(2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)phenoxy)piperidine-1-carboxylate [0434] To the stirred solution of tert-butyl 4-(3-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3- dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)phenoxy)piperidine-1-carboxylate (65 mg, 0.123 mmol) in AcOH (3 mL) was added 1-methyl-1H-indazol-5-amine (18.06 mg, 0.123 mmol) at room temperature. The reaction mixture was allowed to stir for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mass was quenched with aq. sodium bicarbonate solution and extracted with 10% MeOH in DCM (2X 100 mL). The combined organic layer was dried over Na
2SO
4, then concentrated under reduced pressure to give crude compound which was purified by column chromatography (SiO
2/230-400 mesh; 0-20% MeOH-DCM) to give tert-butyl 4-(3-(2-allyl-6-
((1-methyl-1H-indazol-5-yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1- yl)phenoxy)piperidine-1-carboxylate (30 mg). The isolated product was taken as such for next step. [0435] 2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(3-(piperidin-4-yloxy)phenyl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 223) [0436] To a stirred solution of tert-butyl 4-(3-(2-allyl-6-((1-methyl-1H-indazol-5- yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)phenoxy)piperidine-1- carboxylate (30 mg, 0.050 mmol) in dioxane (1 mL) was added 4M HCl in Dioxane (0.2 ml) at 0 °C under inert atmosphere, and the mixture then stirred for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the solvent was evaporated under reduced pressure and washed with n-hexane (2X 5 mL) and then purified by prep HPLC (Column: X-select CSH C18, Mobile phase A: Water (with 0.1% AA), Mobile phase B: Acetonitrile, Flow rate-15.0 mL/Min, Rt-12.8) to give 2-allyl-6-((1-methyl-1H- indazol-5-yl)amino)-1-(3-(piperidin-4-yloxy)phenyl)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (4 mg, 7.97 µmol, 15.86 % yield) as a brown solid. [0437] Example 77.2-allyl-6-(1-methyl-1H-indazol-5-ylamino)-1-[m-(1-methyl-4- piperidylamino)phenyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 226) [0438] 2-allyl-6-(methylthio)-1-(3-nitrophenyl)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one [0439] To a stirred solution of 2-allyl-6-(methylthio)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (1, 1.2 g, 5.40 mmol) in dichloroethane (15 mL) was added 3-nitrophenyl boronic acid (1.352 g, 8.10 mmol), sodium carbonate (1.707 g, 16.20 mmol) and copper (II) acetate (0.490 g, 2.70 mmol) followed by pyridine (0.169 g, 1.080 mmol) at room temperature and the temperature was raised to 70 °C and stirred for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was filtered through celite and extracted with 10% MeOH in DCM (2X 100 mL). The combined organic layers were dried over anhydrous Na2SO4 and then evaporated under reduced pressure to give the crude compound which was purified by column chromatography (silica mesh 100-200 at eluent of 70-100% ethyl acetate and hexane) to give 2-allyl-6- (methylthio)-1-(3-nitrophenyl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (700 mg, 1.794 mmol, 33.2 % yield) as a white solid. [0440] 2-allyl-6-(methylsulfonyl)-1-(3-nitrophenyl)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one
[0441] To a stirred solution of 2-allyl-6-(methylthio)-1-(3-nitrophenyl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one (50 mg, 0.146 mmol) in DCM (10 ml) was added mCPBA (53.7 mg, 0.218 mmol) at room temperature under inert atmosphere, and then continued stirring for 2 h. The progress of the reaction was monitored by TLC and UPLC. After completion of the reaction, the reaction mixture was quenched with aq.10% sodium bicarbonate (10 mL) and extracted with 10% MeOH in DCM (2X 50 mL). The combined organic layers were washed with brine (100 mL), dried over anhydrous sodium sulphate, filtered and concentrated under reduced pressure to give the crude compound 2-allyl-6- (methylsulfonyl)-1-(3-nitrophenyl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (30 mg, 0.024 mmol, 16.47 % yield) as an off-white solid. This crude compound as such taken for the next step without any further purification. [0442] 2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(3-nitrophenyl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one [0443] To a stirred solution of 2-allyl-6-(methylthio)-1-(3-nitrophenyl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one (0.7 g, 2.039 mmol) in AcOH (5 mL) was added 1-methyl- 1H-indazol-5-amine (0.3 g, 2.039 mmol) and allowed to stirred for 16 h at room temperature. The progress of the reaction was monitored by TLC and UPLC. After completion of the reaction, the solvent was evaporated under reduced pressure and the residue quenched with aq.10% sodium bicarbonate solution (100 mL). The mixture was extracted with ethyl acetate (2X 300 mL). The combined organic extract was washed with brine (100 mL), dried over anhydrous sodium sulphate, filtered and concentrated under reduced pressure to give the crude compound which was purified by column chromatography (silica gel, mesh 100-200 at eluent of 10-20% ethyl acetate and hexane) to give 2-allyl-6-((1-methyl-1H-indazol-5- yl)amino)-1-(3-nitrophenyl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (600 mg, 1.221 mmol, 66.51 % yield) as a yellow solid. [0444] 2-allyl-1-(3-aminophenyl)-6-((1-methyl-1H-indazol-5-yl)amino)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one [0445] To a stirred solution of 2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(3- nitrophenyl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (50 mg, 0.113 mmol) in EtOH (3.0 mL) and water (10 mL) was added iron (63.1 mg, 1.130 mmol) and NH
4Cl (60.4 mg, 1.130 mmol) and the temperature was raised to 60
oC and the mixture stirred for 2 h. The progress of the reaction was monitored by TLC and UPLC. After completion of the reaction, the reaction mixture was diluted with water (100 mL) and extracted with ethyl acetate (2X 300 mL). The combined organic layers were washed with brine (100 mL), dried over
anhydrous sodium sulphate, filtered and concentrated under reduced pressure to give the crude compound which was purified by flash column chromatography (silica mesh 100-200 at eluent of 50-80% ethyl acetate and hexane) to give 2-allyl-1-(3-aminophenyl)-6-((1- methyl-1H-indazol-5-yl)amino)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (200 mg, 0.023 mmol, 20.38 % yield) as a white solid compound. [0446] 2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(3-((1-methylpiperidin-4- yl)amino)phenyl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 226): [0447] To a stirred solution of 2-allyl-1-(3-aminophenyl)-6-((1-methyl-1H-indazol-5- yl)amino)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (0.2 g, 0.485 mmol) and 1- methylpiperidin-4-one (55 mg, 0.485 mmol) was added AcOH (1 mL) at room temperature and the resulting mixture was allowed to stir for 2 h. Then it was cooled to 0 °C and STAB (0.617 g, 2.91 mmol) was added and the mixture was allowed to stir at room temperature for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was quenched with ice cold water and extracted with DCM (2X 100 mL). The combined organic layers were dried over anhydrous Na2SO4, and evaporated under reduced pressure to give crude compound which was purified by prep HPLC (Column: X-select CSH C18, Mobile Phase A: 0.1% formic acid in water, Mobile Phase B: acetonitrile, Flowrate:15.0mL/Min, Rt-10.8) to give 2-allyl-6-((1-methyl-1H-indazol-5- yl)amino)-1-(3-((1-methylpiperidin-4-yl)amino)phenyl)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (14 mg, 0.026 mmol, 5.44 % yield) as an off-white solid. [0448] Example 78.2-ethyl-1-[6-(4-piperidyloxy)-2-pyridyl]-6-m-toluidino-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 298) [0449] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one. Yield: 55 mg (42%) as a white powder. Yield: 92.5 mg, 80% as off-white solid. [0450] Example 79.2-ethyl-6-(p-fluorophenylamino)-1-[6-(4-piperidyloxy)-2- pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 297) [0451] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one. Yield: 55 mg (42%) as a white powder. Yield: 50.0 mg, 43% as off-white solids. [0452] Example 80.2-allyl-6-(1-methyl-4-pyrazolylamino)-1-[m-(4- piperidyloxy)phenyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 224)
[0453] tert-butyl-4-(3-(2-allyl-6-((1-methyl-1H-pyrazol-4-yl)amino)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)phenoxy)piperidine-1-carboxylate [0454] To a stirred solution of tert-butyl 4-(3-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3- dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)phenoxy)piperidine-1-carboxylate (80 mg, 0.151 mmol) in acetic acid (3 mL) was added 1-methyl-1H-pyrazol-4-amine (14.67 mg, 0.151 mmol) at 25 °C. The reaction mixture was allowed to stir at 25 °C for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction. The reaction mixture was concentrated under reduced pressure and then diluted with 10% aq. sodium bicarbonate and then extracted with 10% MeOH in DCM. The combined organic layers were dried over anhydrous sodium sulphate, filtered and concentrated under reduced pressure to give crude compound which was purified using column chromatography (silica gel, mesh 100-200 at eluent of 5-10% MeOH in DCM) to give tert-butyl 4-(3-(2-allyl-6-((1- methyl-1H-pyrazol-4-yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1- yl)phenoxy)piperidine-1-carboxylate (60 mg, 0.082 mmol, 54.5 % yield) as an off-white solid. [0455] 2-allyl-6-((1-methyl-1H-pyrazol-4-yl)amino)-1-(3-(piperidin-4-yloxy)phenyl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 224) [0456] To a stirred solution of tert-butyl 4-(3-(2-allyl-6-((1-methyl-1H-pyrazol-4- yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)phenoxy)piperidine-1- carboxylate (60 mg, 0.110 mmol) in 1,4-dioxane (5 ml) was added 4M HCl (0.329 mL, 1.317 mmol) in dioxane at 0 °C under inert atmosphere. The reaction was allowed to stir at room temperature for 8 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction was concentrated under reduced pressure to give the crude which was purified by Prep-HPLC (Column: X-select CSH C18, Mobile phase A: water (with 0.1% FA), Mobile phase B: acetonitrile (with 0.1% FA), Flow rate-15.0 mL/Min, Rt-12.8) to give 2-allyl-6-((1-methyl-1H-pyrazol-4-yl)amino)-1-(3-(piperidin-4- yloxy)phenyl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (8 mg, 0.018 mmol, 16 % yield) as a brown solid. [0457] Example 81.2-allyl-1-[6-(4-piperidyloxy)-2-pyridyl]-6-[p-(2,2,2- trifluoroethoxy)phenylamino]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 227) [0458] tert-butyl-4-(6-{2-allyl-3-oxo-6-[p-(2,2,2-trifluoroethoxy)phenylamino]-1,2- dihydro-3H-1,2,5,7-tetraazainden-1-yl}-2-pyridyloxy)-1-piperidinecarboxylate
[0459] mCPBA (<77% pure) (166 mg, assumed 0.722 mmol) in DCM (0.5 mL) was added to a stirred solution of tert-butyl 4-{6-[2-allyl-6-(methylthio)-3-oxo-1,2-dihydro-3H- 1,2,5,7-tetraazainden-1-yl]-2-pyridyloxy}-1-piperidinecarboxylate (300 mg, 0.602 mmol) in DCM (2.5 mL) at room temperature under nitrogen. After 15 min, DCM was concentrated in vacuo, and the crude product solubilized in MeCN (3 ml). Then p-(2,2,2- trifluoroethoxy)aniline (115 mg,0.602 mmol) was added and the reaction mixture stirred at 60 °C in a closed vial. After 18 h, the reaction mixture was allowed to cool to RT, and mCPBA quenched with 1M NaOH (5 mL) which was added dropwise. The aqueous phase was extracted with EtOAc (3x20 mL) and washed with brine (20 mL). The combined organic layers were dried (MgSO
4) and concentrated under reduced pressure to give a yellow powder. The crude material was dissolved in DCM (5 ml), loaded onto a 10 g silica column and purified by flash chromatography (0- 100%, EtOAc: PE) to give tert-butyl 4-(6-{2-allyl-3- oxo-6-[p-(2,2,2-trifluoroethoxy)phenylamino]-1,2-dihydro-3H-1,2,5,7-tetraazainden-1-yl}-2- pyridyloxy)-1-piperidinecarboxylate [210 mg, 94%] as a pale-yellow solid. [0460] 2-allyl-6-[p-(2-fluoroethoxy)phenylamino]-1-[6-(4-piperidyloxy)-2-pyridyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one trifluoroacetic acid salt (Compound 227) [0461] A solution of tert-butyl 4-(6-{2-allyl-3-oxo-6-[p-(2,2,2- trifluoroethoxy)phenylamino]-1,2-dihydro-3H-1,2,5,7-tetraazainden-1-yl}-2-pyridyloxy)-1- piperidinecarboxylate (210 mg, 0.360 mmol) in DCM (5mL) was treated with TFA (2.5 mL) for 2 h. The solvent was removed in vacuo and the crude was dissolved in EtOAc, washed with sat aq NaHCO
3, brine, dried (MgSO
4), and concentrated. The resulting material was purified by reversed phase chromatography (Gemini NX-C18,21*150 mm, water (0.1% TFA)/acetonitrile, gradient over 12 minutes, 25 ml/min). The pure fractions were pooled and concentrated to give 2-allyl-6-[p-(2-fluoroethoxy)phenylamino]-1-[6-(4-piperidyloxy)-2- pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one as a trifluoroacetic acid salt as a white solid. [1.4 mg]. [0462] Example 82.5-{2-allyl-3-oxo-1-[6-(4-piperidyloxy)-2-pyridyl]-1,2-dihydro- 3H-1,2,5,7-tetraazainden-6-ylamino}-2-toluonitrile (Compound 293) [0463] This compound was made using a similar method as described in the synthesis of 2-allyl-6-(2-methoxy-4-pyridylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one. Yield: 27 mg, 47%. [0464] Example 83.2-ethyl-6-(p-fluorophenylamino)-1-[6-(1-methyl-4-piperidyloxy)- 2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 290)
[0465] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one. Yield: 55 mg (42%) as a white powder. Yield: 156 mg, 43% as yellow solid. [0466] Example 84.2-ethyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-6-m-toluidino- 1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 289) [0467] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one. Yield: 55 mg (42%) as a white powder. Yield: 82 mg, 53% as off-white solid. [0468] Example 85.2-allyl-1-(6-(methyl(1-methylpiperidin-4-yl)amino)pyridin-2-yl)- 6-((1-(3,3,3-trifluoropropyl)-1H-pyrazol-4-yl)amino)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (Compound 201) [0469] This compound was made using a similar method as described in the synthesis of 2-allyl-6-(1-methyl-1H-indazol-5-ylamino)-1-[m-(1-methyl-4-piperidylamino)phenyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one. Yield: 28 mg (25.2 %). [0470] Example 86.2-allyl-6-(1-isobutyl-4-pyrazolylamino)-1-[6-(1-methyl-4- piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 200) [0471] tert-butyl 4-{6-[6-(1-isobutylpyrazol-4-ylamino)-3-oxo-2-(prop-2-enyl)-1,2- dihydro-3H-1,2,5,7-tetraazainden-1-yl]pyrid-2-yloxy}piperidine-1-carboxylate [0472] mCPBA (<77% pure) (108 mg, assumed 0.469 mmol) in DCM (0.5 mL) was added to a stirred solution of tert-butyl 4-{6-[2-allyl-6-(methylthio)-3-oxo-1,2-dihydro-3H- 1,2,5,7-tetraazainden-1-yl]-2-pyridyloxy}-1-piperidinecarboxylate (123 mg, 0.247 mmol) in DCM (5 mL) at room temperature under nitrogen. After 15 min, DCM was concentrated in vacuo, and the crude solubilized in MeCN (5 ml). Then 1-isobutyl-4-pyrazolylamine (54.4 mg, 0.391 mmol) was added. The reaction mixture was stirred at 60 °C in a closed vial. After22 h, the reaction mixture was allowed to cool to RT, and mCPBA quenched with 1M NaOH (5 mL) which was added dropwise. The aqueous phase was extracted with EtOAc (3x20 mL). The combined organic layers were washed with brine and dried (MgSO4) and concentrated under reduced pressure to give the crude product as a yellow powder. The crude material was dissolved in DCM (5 ml), loaded onto a 10 g silica column and purified by flash chromatography (0- 100%, EtOAc: PE) to give tert-butyl 4-{6-[6-(1-isobutylpyrazol-4- ylamino)-3-oxo-2-(prop-2-enyl)-1,2-dihydro-3H-1,2,5,7-tetraazainden-1-yl]pyrid-2- yloxy}piperidine-1-carboxylate as a pale-yellow solid (100 mg, 84%).
[0473] 2-allyl-6-(1-isobutyl-4-pyrazolylamino)-1-[6-(4-piperidyloxy)-2-pyridyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one [0474] A solution of tert-butyl 4-{6-[6-(1-isobutylpyrazol-4-ylamino)-3-oxo-2-(prop-2- enyl)-1,2-dihydro-3H-1,2,5,7-tetraazainden-1-yl]pyrid-2-yloxy}piperidine-1-carboxylate (100 mg, 0.205 mmol) in DCM (5 mL) was treated with TFA (2 mL) for 2 h. The solvent was removed in vacuo and the crude was dissolved in EtOAc, washed with sat aq NaHCO
3, brine, dried (MgSO4), and concentrated. The resulting material was purified by HPLC (Phenomenex Gemini 5 µm NX-C18110Å 150x21, 2mm, buffer 0.2% NH
4OH, water (0.2 % NH4OH)/acetonitrile, gradient over 9 minutes, 30 ml/min). The pure fractions were pooled and concentrated to give 2-allyl-6-(1-isobutyl-4-pyrazolylamino)-1-[6-(4-piperidyloxy)-2- pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one as a white solid (100 mg). [0475] 2-allyl-6-(1-isobutyl-4-pyrazolylamino)-1-[6-(1-methyl-4-piperidyloxy)-2- pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 200) [0476] 2-allyl-6-(1-isobutyl-4-pyrazolylamino)-1-[6-(4-piperidyloxy)-2-pyridyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one (100 mg, 0.205 mmol) was dissolved in anhydrous THF (5 mL). Formaldehyde (~ 36% pure, 30.4 µL, 0.408 mmol) and STAB (86.5 mg, 0.408 mmol) were added in that order. The reaction mixture was stirred at room temperature while monitored by LCMS. After 2 h, the reaction was quenched with saturated aqueous sodium bicarbonate (5 mL) which was added dropwise. The aqueous phase was extracted with EtOAc (3x20 mL). The combined organic layers were dried (MgSO4) and concentrated under reduced pressure to give the crude material as a yellow powder. The crude product was dissolved in MeOH (5 ml) and was purified by HPLC (Phenomenex Gemini 5 µm NX-C18 110Å 150x21, 2mm, buffer 0.2% NH
4OH, water (0.2 % NH
4OH)/acetonitrile, gradient over 6 minutes, 30 ml/min). The pure fractions were pooled and concentrated to give 2-allyl-6-(1- isobutyl-4-pyrazolylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one (60 mg, 60%). [0477] Example 87.2-allyl-6-(1-isopropyl-4-pyrazolylamino)-1-[6-(1-methyl-4- piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 198) [0478] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one. Yield: 60 mg (24%). [0479] Example 88.2-allyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-6-(6-methyl-3- pyridylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 197)
[0480] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one. Yield: 29 mg TFA salt (83%) as a pale-yellow powder. [0481] Example 89.2-allyl-6-(2H-1,3-benzodioxol-5-ylamino)-1-[6-(1-methyl-4- piperidylamino)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 196) [0482] This compound was made using a similar method as described in the synthesis of2-allyl-6-(1-methyl-1H-indazol-5-ylamino)-1-[m-(1-methyl-4-piperidylamino)phenyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one. The purified material was converted into the free base by solid-phase extraction (1 g SCX-2, MeOH, NH
3/MeOH 1.4 M). Yield: 41 mg free base (33%) as a brown solid. [0483] Example 90.2-allyl-6-(1-benzofuran-6-ylamino)-1-[6-(1-methyl-4- piperidylamino)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 195) [0484] This compound was made using a similar method as described in the synthesis of 2-allyl-6-(1-methyl-1H-indazol-5-ylamino)-1-[m-(1-methyl-4-piperidylamino)phenyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one. Yield: 110 mg TFA salt (74%) as a yellow solid. [0485] Example 91.2-allyl-1-{6-(9-methyl-9-azabicyclo[3.3.1]non-3-yloxy)-2- pyridyl}-6-(1-methyl-4-pyrazolylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 194) [0486] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one. Yield: 40 mg (31.7 %). [0487] Example 92.1-{6-[(R)-3-piperidyloxy]-2-pyridyl}-2-allyl-6-(p- chlorophenylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 192) [0488] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one. [0489] Example 93.2-allyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-6-m-toluidino- 1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 191) [0490] tert-butyl 4-{6-[6-(3-methylphenylamino)-3-oxo-2-(prop-2-enyl)-1,2-dihydro-3H- 1,2,5,7-tetraazainden-1-yl]pyrid-2-yloxy}piperidine-1-carboxylate [0491] mCPBA (<77% pure) (167.2 mg, assumed 0.727 mmol) in DCM (0.5 mL) was added to a stirred solution of tert-butyl 4-{6-[2-allyl-6-(methylthio)-3-oxo-1,2-dihydro-3H-
1,2,5,7-tetraazainden-1-yl]-2-pyridyloxy}-1-piperidinecarboxylate (300 mg, 0.602 mmol) in DCM (5 mL) at room temperature under nitrogen. After 15 min, DCM was concentrated in vacuo, and the crude solubilized in MeCN (5 ml) then m-toluidine (96.7 mg, 0.903 mmol) was added. The reaction mixture stirred at 60 °C in a closed vial. After
22 h, the reaction mixture was allowed to cool to RT, and mCPBA was quenched with 1M NaOH (5 mL) which was added dropwise. The aqueous phase was extracted with EtOAc (3x20 mL). The combined organic layers were washed with brine (20 mL), then dried (MgSO4) and concentrated under reduced pressure to give the product as a yellow powder. The crude material was dissolved in DCM (5 ml), loaded onto a 10 g silica column and purified by flash chromatography (0- 100%, EtOAc: PE) to give tert-butyl 4-{6-[6-(3-methylphenylamino)-3- oxo-2-(prop-2-enyl)-1,2-dihydro-3H-1,2,5,7-tetraazainden-1-yl]pyrid-2-yloxy}piperidine-1- carboxylate [300 mg, 87.2 %] as a pale-yellow solid. [0492] 2-allyl-1-[6-(4-piperidyloxy)-2-pyridyl]-6-m-toluidino-1,2-dihydro-3H-1,2,5,7- tetraazainden-3-one trifluoroacetic acid salt [0493] A solution of tert-butyl 4-{6-[6-(3-methylphenylamino)-3-oxo-2-(prop-2-enyl)- 1,2-dihydro-3H-1,2,5,7-tetraazainden-1-yl]pyrid-2-yloxy}piperidine-1-carboxylate (300 mg, 0.525 mmol) in DCM (5 mL) was treated with TFA (2 mL) for 2 h. The solvent was removed in vacuo and the crude was dissolved in EtOAc, washed with sat aq NaHCO3, brine, dried (MgSO
4), and concentrated. The resulting material was purified by HPLC (Phenomenex Gemini 5 µm NX-C18110Å 150x21, 2mm, buffer 0.2% NH4OH, water (0.2 % NH
4OH)/acetonitrile, gradient over 9 minutes, 30 ml/min). The pure fractions were pooled and concentrated to give 2-allyl-1-[6-(4-piperidyloxy)-2-pyridyl]-6-m-toluidino-1,2-dihydro- 3H-1,2,5,7-tetraazainden-3-one as a trifluoroacetic acid salt as a white solid [ 120 mg]. [0494] 2-allyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-6-m-toluidino-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one (Compound 191) [0495] 2-allyl-1-[6-(4-piperidyloxy)-2-pyridyl]-6-m-toluidino-1,2-dihydro-3H-1,2,5,7- tetraazainden-3-one (120 mg, 0.21 mmol) was dissolved in anhydrous THF (5 mL). Formaldehyde (~ 36% pure, 31 µL, 0.21 mmol) and STAB (89 mg, 0.21 mmol) were added in that order. The reaction mixture was stirred at room temperature while monitored by LCMS. After 2 h, the reaction was quenched with saturated aqueous sodium bicarbonate (5 mL) which was added dropwise. The aqueous phase was extracted with EtOAc (3x20 mL). The combined organic layers were dried (MgSO
4) and concentrated under reduced pressure to give the crude material as a yellow powder.
[0496] The crude product was dissolved in MeOH (5 ml) and was purified by HPLC (Phenomenex Gemini 5 µm NX-C18110Å 150x21, 2mm, buffer 0.2% NH
4OH, water (0.2 % NH4OH)/acetonitrile, gradient over 6 minutes, 30 ml/min). The pure fractions were pooled and concentrated giving [100 mg, yield 33%] as a white solid giving 2-allyl-1-[6-(1-methyl- 4-piperidyloxy)-2-pyridyl]-6-m-toluidino-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (40 mg, 33%). [0497] Example 94.2-allyl-1-[6-(1-methyl-4-piperidylamino)-2-pyridyl]-6-m- toluidino-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 188) [0498] This compound was made using a similar method as described in the synthesis of 2-allyl-6-(1-methyl-1H-indazol-5-ylamino)-1-[m-(1-methyl-4-piperidylamino)phenyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one. Yield: 144 mg, 56%. [0499] Example 95.2-allyl-1-[6-(1-methyl-4-piperidylamino)-2-pyridyl]-6-[4-(2,2,2- trifluoroethoxy)-3-toluidino]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 181) [0500] This compound was made using a similar method as described in the synthesis of 2-allyl-6-(1-methyl-1H-indazol-5-ylamino)-1-[m-(1-methyl-4-piperidylamino)phenyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one. Yield: 105 mg, 68%. [0501] Example 96.2-allyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-6-(1-propyl-4- pyrazolylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 180) [0502] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one. Yield 75 mg, 70%. [0503] Example 97.2-allyl-1-[6-(4-piperidylamino)-2-pyridyl]-6-[4-(2,2,2- trifluoroethoxy)-3-toluidino]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 178) [0504] This compound was made using a similar method as described in the synthesis of 2-allyl-6-(1-methyl-1H-indazol-5-ylamino)-1-[m-(1-methyl-4-piperidylamino)phenyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one. Yield: 220 mg, 81%. [0505] Example 98.1-{6-[N-methyl(1-methyl-4-piperidyl)amino]-2-pyridyl}-2-allyl- 6-(1-propyl-4-pyrazolylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 177) [0506] This compound was made using a similar method as described in the synthesis of 2-allyl-6-(1-methyl-1H-indazol-5-ylamino)-1-[m-(1-methyl-4-piperidylamino)phenyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one. Yield: 8 mg, 10%.
[0507] Example 99.1-{6-[N-(S)-3-piperidyl-N-methylamino]-2-pyridyl}-2-allyl-6-(p- chlorophenylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 173) [0508] This compound was made using a similar method as described in the synthesis of 2-allyl-6-(1-methyl-1H-indazol-5-ylamino)-1-[m-(1-methyl-4-piperidylamino)phenyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one starting with tert-butyl (S)-3-amino-1- piperidinecarboxylate. Yield: 7.0 mg TFA salt (31%). [0509] Example 100.1-{6-[N-(R)-3-piperidyl-N-methylamino]-2-pyridyl}-2-allyl-6- (p-chlorophenylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 171) [0510] This compound was made using a similar method as described in the synthesis of 2-allyl-6-(1-methyl-1H-indazol-5-ylamino)-1-[m-(1-methyl-4-piperidylamino)phenyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one starting with tert-butyl (R)-3-amino-1- piperidinecarboxylate. Yield: 6.6 mg TFA salt (25%). [0511] Example 101.1-{6-[(R)-1-methyl-3-piperidylamino]-2-pyridyl}-2-allyl-6-(p- chlorophenylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 168) [0512] This compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one starting with 1-{6-[(R)-3-piperidylamino]-2- pyridyl}-2-allyl-6-(p-chlorophenylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one. Yield: 93 mg, 76%. [0513] Example 102.1-{6-[(S)-1-methyl-3-piperidylamino]-2-pyridyl}-2-allyl-6-(p- chlorophenylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 167) [0514] This compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one starting with 1-{6-[(S)-3-piperidylamino]-2- pyridyl}-2-allyl-6-(p-chlorophenylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one. Yield: 91 mg, 34%. [0515] Example 103.1-{6-[(R)-3-piperidylamino]-2-pyridyl}-2-allyl-6-(p- chlorophenylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 166) [0516] This compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one starting with tert-butyl (R)-3-amino-1- piperidinecarboxylate. Yield: 150 mg, 63%. [0517] Example 104.1-{6-[(S)-3-piperidylamino]-2-pyridyl}-2-allyl-6-(p- chlorophenylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 165)
[0518] This compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one starting with tert-butyl (S)-3-amino-1- piperidinecarboxylate. Yield: 310 mg, 39%. [0519] Example 105.1-(6-{[(S)-1-methyl-3-piperidyl]-N-methylamino}-2-pyridyl)-2- allyl-6-(p-chlorophenylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 164) [0520] This compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one starting with tert-butyl (S)-3-amino-1- piperidinecarboxylate. Yield: 40 mg TFA salt (43%) as a pale-yellow solid. [0521] Example 106. (R)-2-allyl-6-((4-chlorophenyl)amino)-1-(6-(methyl(1- methylpiperidin-3-yl)amino)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3- one (Compound 163) [0522] This compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one starting with tert-butyl (R)-3-amino-1- piperidinecarboxylate. Yield: 38 mg TFA salt (35%) as a pale-yellow solid. [0523] Example 107.2-allyl-6-(3-fluoro-5-toluidino)-1-[6-(1-methyl-4- piperidylamino)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 161) [0524] This compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one. Yield: 54 mg, 62%. [0525] Example 108.2-allyl-6-(3-fluoro-5-toluidino)-1-[6-(4-piperidylamino)-2- pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 160) [0526] This compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one. Yield: 78 mg, 63%. [0527] Example 109.2-allyl-1-[6-(1-methyl-4-piperidylamino)-2-pyridyl]-6-(3- phenyl-5-isothiazolylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 158)
[0528] This compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one. Yield: 1.8 mg, 37%. [0529] Example 110.6-(4-fluoro-3-toluidino)-2-methyl-1-[6-(4-piperidyloxy)-2- pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 154) [0530] This compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using tert‐butyl 4‐({6‐[2‐methyl‐6‐ (methylsulfanyl)‐3‐oxo‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐2‐ yl}oxy)piperidine‐1‐carboxylate (81 mg) and 4‐fluoro‐3‐methylaniline (1 equiv.) to give the crude free base intermediate (77 mg) of which 20% was purified by prep-HPLC. Yield: 9.3 mg TFA salt (60%). [0531] Example 111.6-(p-chlorophenylamino)-2-methyl-1-[6-(4-piperidyloxy)-2- pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 153) [0532] This compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using tert‐butyl 4‐({6‐[2‐methyl‐6‐ (methylsulfanyl)‐3‐oxo‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐2‐ yl}oxy)piperidine‐1‐carboxylate (81 mg) and 4‐chloroaniline (1 equiv.) to give the crude free base intermediate (78 mg) of which 20% was purified by prep-HPLC. Yield: 8.7 mg TFA salt (56%). [0533] Example 112.6-(4-fluoro-3-toluidino)-2-methyl-1-[6-(1-methyl-4- piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 152) [0534] This compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using 6‐[(4‐fluoro‐3‐methylphenyl)amino]‐2‐ methyl‐1‐[6‐(piperidin‐4‐yloxy)pyridin‐2‐yl]‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one (62 mg). Yield: 57 mg TFA salt (71%) as a powder. [0535] Example 113.2-allyl-6-(3,4-dichlorophenylamino)-1-[6-(1-methyl-4- piperidylamino)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 151) [0536] This compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one. Yield: 33 mg, 84%.
[0537] Example 114.6-(p-chlorophenylamino)-2-methyl-1-[6-(1-methyl-4- piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 150) [0538] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one. Yield: 45 mg TFA salt (57%) as a powder. [0539] Example 115.1-{6-[(S)-1-methyl-3-pyrrolidinyloxy]-2-pyridyl}-2-allyl-6-(p- chlorophenylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 148) [0540] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one using tert-butyl (3S)-3-hydroxypyrrolidine-1-carboxylate. Yield: 94 mg TFA salt (82%) as a pale-yellow powder. [0541] Example 116.2-allyl-6-(3,4-dichlorophenylamino)-1-[6-(4-piperidylamino)-2- pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 146) [0542] This compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using 3,4-dicholoroaniline and tert‐butyl 4‐({6‐ [6‐(methylsulfanyl)‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐ yl]pyridin‐2‐yl}amino)piperidine‐1‐carboxylate. Yield: 46 mg, 24%. [0543] Example 117.1-{6-[(S)-3-pyrrolidinyloxy]-2-pyridyl}-2-allyl-6-(p- chlorophenylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 145) [0544] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one using tert-butyl (3S)-3-hydroxypyrrolidine-1-carboxylate. Yield: 177 mg TFA salt (62%) as a yellow powder. [0545] Example 118.2-allyl-6-(p-chlorophenylamino)-1-[6-(4-piperidyloxy)-2- pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 141) [0546] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one using tert‐butyl 4‐({6‐[6‐(methylsulfanyl)‐3‐oxo‐2‐(prop‐2‐en‐1‐ yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐2‐yl}oxy)piperidine‐1‐carboxylate (99 mg) and 4-chloroaniline (1 equiv.). After deprotection, the reaction mixture was concentrated to a yellow oil (175 mg, crude), half of which was purified by prep-HPLC then converted to the free base by solid-phase extraction (1 g SCX-2, MeOH, 1.4 M MeOH/NH3). Yield: 15 mg free base (31%) as a powder.
[0547] Example 119.2-allyl-6-(p-chlorophenylamino)-1-[6-(1-methyl-4- piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 142) [0548] 2-allyl-1-(6-fluoropyridin-2-yl)-6-(methylthio)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one [0549] A stirred solution of 2-allyl-6-(methylthio)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (1 g, 4.50 mmol), 2-bromo-6-fluoropyridine (0.871 g, 4.95 mmol), trans- N,N -Dimethylethylenediamine (0.397 g, 4.50 mmol) and K2CO3 (1.865 g, 13.50 mmol) in DMSO (4 ml), was degassed for 5 min, then was added copper(I) iodide (0.857 g, 4.50 mmol) at 25 °C and the resulting mixture was stirred for 2 h at 100 °C. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was filtered on a celite pad and washed with ethyl acetate (250 mL). The filtrate was concentrated under reduced pressure. The resulting crude material was purified by flash chromatography (SiO2/100-200 mesh; 20-30% Ethyl acetate-hexane) to afford 2-allyl-1-(6-fluoropyridin-2- yl)-6-(methylthio)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (700 mg, 2.089 mmol, 46.4 % yield) as a pale brown solid. [0550] 2-allyl-1-(6-fluoropyridin-2-yl)-6-(methylsulfonyl)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one [0551] To a stirred solution of 2-allyl-1-(6-fluoropyridin-2-yl)-6-(methylthio)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (1 g, 3.15 mmol) in dichloromethane (30 mL) was added m-CPBA (1.554 g, 6.30 mmol) at 0 °C and the mixture was stirred for 2 h at 25 °C. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was diluted with DCM (300 mL) and washed with sodium bicarbonate solution (2X 150 mL). The combined organic layer was dried over Na
2SO
4, filtered and concentrated under reduced pressure to afford the crude 2-allyl-1-(6-fluoropyridin-2-yl)-6- (methylsulfonyl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (1 g, 2.63 mmol, 84 % yield) as a pale yellow solid
. [0552] 2-allyl-6-((4-chlorophenyl)amino)-1-(6-fluoropyridin-2-yl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one [0553] To a stirred solution of 2-allyl-1-(6-fluoropyridin-2-yl)-6-(methylsulfonyl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (1 g, 2.86 mmol) in acetic acid (10 mL) was added 4-chloroaniline (0.438 g, 3.44 mmol) at room temperature under nitrogen atmosphere. The reaction mixture was stirred at room temperature for 16 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was concentrated under reduced pressure to afford a residue. The resultant residue was basified
with sodium bicarbonate and extracted with ethyl acetate (10x2 mL). The combined organic layer was dried over Na
2SO
4, filtered, and concentrated under reduced pressure to afford crude. The resulting crude material was purified by flash chromatography (SiO2/100-200 mesh; 7-8% methanol- DCM) to afford 2-allyl-6-((4-chlorophenyl)amino)-1-(6- fluoropyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (800 mg, 1.774 mmol, 62.0 % yield) as a pale brown solid. [0554] 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2- yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 142) [0555] NaH (60% in Oil) (121 mg, 2.77 mmol) was added to a stirred solution of 1- methylpiperidin-4-ol (218 mg, 1.890 mmol) in tetrahydrofuran (10 ml). The resulting mixture was stirred for 1 h at 60 °C. Then 2-allyl-6-((4-chlorophenyl)amino)-1-(6-fluoropyridin-2- yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (6, 500 mg, 1.260 mmol) was added and the mixture stirred at 60 °C for 16 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was diluted with ice water (150 mL) and extracted with 10% methanol-DCM (2X 100 mL). The combined organic layer was dried over Na2SO4, filtered, and concentrated under reduced pressure. The resulting crude material was purified by flash chromatography (SiO
2/230-400 mesh; 20-25% methanol- DCM) to afford 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)- 1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (175 mg, 0.352 mmol, 27.9 % yield) as an off white solid. [0556] Example 120.2-allyl-6-(4-fluoro-3-toluidino)-1-[6-(1-methyl-4- piperidylamino)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 140) [0557] This compound was made using a similar method as described in the synthesis of This compound was made using a similar method as described in the synthesis of 2-allyl-6- ((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one. Yield: 129 mg, 75%. [0558] Example 121.2-allyl-1-[6-(1-methyl-4-piperidylamino)-2-pyridyl]-6-[p-(2,2,2- trifluoroethoxy)phenylamino]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 139) [0559] This compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one. Yield: 80 mg, 66.6%.
[0560] Example 122.2-allyl-6-(p-chlorophenylamino)-1-[6-(1-methyl-4- piperidylamino)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 138) [0561] This compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one. Yield: 7.4 mg, 63%. [0562] Example 123.2-allyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-6-(1-methyl-4- pyrazolylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 137) [0563] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one. Yield: 20 mg, 17%. [0564] Example 124.2-allyl-6-(4-chloro-3-toluidino)-1-[6-(4-piperidylamino)-2- pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 133) [0565] This compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using 4-chloro-3-methylaniline and tert‐butyl 4‐ ({6‐[6‐(methylsulfanyl)‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐ yl]pyridin‐2‐yl}amino)piperidine‐1‐carboxylate. Yield: 24 mg, 38%. [0566] Example 125.2-ethyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-6-(1-methyl- 4-pyrazolylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 132) [0567] This compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using 1-methyl-1H-pyrazol-4-amine and 2- ethyl-1-{6-[(1-methylpiperidin-4-yl)oxy]pyridin-2-yl}-6-(methylsulfanyl)-1H,2H,3H- pyrazolo[3,4-d]pyrimidin-3-one. Yield: 35 mg, 56%. [0568] Example 126.2-allyl-1-[6-(4-piperidylamino)-2-pyridyl]-6-[p- (trifluoromethyl)phenylamino]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 131) [0569] This compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one. Yield: 18 mg, 29%. [0570] Example 127.2-allyl-1-[6-(4-piperidylamino)-2-pyridyl]-6-[p-(2,2,2- trifluoroethoxy)phenylamino]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 130)
[0571] This compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one. Yield: 6.9 mg. [0572] Example 128.2-allyl-6-(4-fluoro-3-toluidino)-1-[6-(4-piperidylamino)-2- pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 128) [0573] This compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using 4-fluoro-3-methylaniline and tert‐butyl 4‐ ({6‐[6‐(methylsulfanyl)‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐ yl]pyridin‐2‐yl}amino)piperidine‐1‐carboxylate. Yield: 153 mg, 61%. [0574] Example 129.1-{6-[N-methyl(1-methyl-4-piperidyl)amino]-2-pyridyl}-2- ethyl-6-(1-methyl-1H-indazol-5-ylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 287) [0575] This compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one. Yield: 35 mg, 60%. [0576] Example 130.2-allyl-6-(4-methoxy-3-toluidino)-1-[6-(4-piperidylamino)-2- pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 127) [0577] This compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using 4-methoxy-3-methylaniline and tert‐butyl 4‐({6‐[6‐(methylsulfanyl)‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐ yl]pyridin‐2‐yl}amino)piperidine‐1‐carboxylate. Yield: 43 mg, 71%. [0578] Example 131.2-allyl-1-[6-(4-piperidylamino)-2-pyridyl]-6-m-toluidino-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 126) [0579] This compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using 3-methylaniline and tert‐butyl 4‐({6‐[6‐ (methylsulfanyl)‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐ 2‐yl}amino)piperidine‐1‐carboxylate. Yield: 39 mg, 67%. [0580] Example 132.2-allyl-6-(p-chlorophenylamino)-1-[6-(4-piperidylamino)-2- pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 124) [0581] This compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2-
dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using tert‐butyl 4‐({6‐[6‐(methylsulfanyl)‐3‐ oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐2‐ yl}amino)piperidine‐1‐carboxylate (50 mg) and 4‐chloroaniline (1 equiv.). Yield: 29 mg TFA salt (49%) as a yellow powder. [0582] Example 133.1-[6-(N-methyl-N-4-piperidylamino)-2-pyridyl]-2-ethyl-6-(1- methyl-1H-indazol-5-ylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 286) [0583] This compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using 1-methyl-1H-indazol-5-amine and tert- butyl 4-({6-[2-ethyl-6-(methylsulfanyl)-3-oxo-1H,2H,3H-pyrazolo[3,4-d]pyrimidin-1- yl]pyridin-2-yl}(methyl)amino)piperidine-1-carboxylate. Yield: 70 mg, 54%. [0584] Example 134.2-methyl-6-(1-methyl-1H-indazol-5-ylamino)-1-[6-(1-methyl-4- piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 121) [0585] This compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using 2‐methyl‐1‐{6‐[(1‐methylpiperidin‐4‐ yl)oxy]pyridin‐2‐yl}‐6‐(methylsulfanyl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one (69 mg) and 1‐methyl‐1H‐indazol‐5‐amine (1 equiv.). Yield: 49 mg TFA salt (46%) as a yellow powder. [0586] Example 135.1-{6-[N-methyl(1-methyl-4-piperidyl)amino]-2-pyridyl}-2-allyl- 6-(1-methyl-1H-indazol-5-ylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 118) [0587] This compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one. Yield: 9.8 mg, 68%. [0588] Example 136.6-anilino-2-ethyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 117) [0589] This compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using 2‐ethyl‐1‐{6‐[(1‐methylpiperidin‐4‐ yl)oxy]pyridin‐2‐yl}‐6‐(methylsulfanyl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one (102 mg) and aniline (1 equiv.). Yield: 69 mg TFA salt (48%) as a yellow powder.
[0590] Example 137.1-[6-(N-methyl-N-4-piperidylamino)-2-pyridyl]-2-allyl-6-(1- methyl-1H-indazol-5-ylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 116) [0591] This compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using 1-methyl-1H-indazol-5-amine and tert- butyl 4-[methyl({6-[6-(methylsulfanyl)-3-oxo-2-(prop-2-en-1-yl)-1H,2H,3H-pyrazolo[3,4- d]pyrimidin-1-yl]pyridin-2-yl})amino]piperidine-1-carboxylate. Yield: 22 mg, 40%. [0592] Example 138.2-ethyl-6-(1-methyl-1H-indazol-5-ylamino)-1-[6-(1-methyl-4- piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 114) [0593] This compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using 2‐ethyl‐1‐{6‐[(1‐methylpiperidin‐4‐ yl)oxy]pyridin‐2‐yl}‐6‐(methylsulfanyl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one (103 mg) and 1‐methyl‐1H‐indazol‐5‐amine (2.5 equiv.). Yield: 64 mg TFA salt (41%) as a yellow powder. [0594] Example 139.2-allyl-6-(2-methyl-4-pyridylamino)-1-[6-(4-piperidyloxy)-2- pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 113) [0595] This compound was made using a similar method as described in the synthesis of 2-allyl-6-(2-methoxy-4-pyridylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one. Yield 2 mg. [0596] Example 140.1-{6-[(S)-1-methyl-3-pyrrolidinylamino]-2-pyridyl}-2-allyl-6-(1- methyl-1H-indazol-5-ylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 108) [0597] This compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one. Yield: 6.5 mg TFA salt (24%) as a yellow powder. [0598] Example 141. Synthesis of 1-{6-[(S)-3-pyrrolidinylamino]-2-pyridyl}-2-allyl-6- (1-methyl-1H-indazol-5-ylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 107) [0599] This compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2-
dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one. Yield: 73 mg TFA salt (66%) as a yellow powder. [0600] Example 142. Synthesis of 2-allyl-6-(1-methyl-1H-indazol-5-ylamino)-1-[6-(4- piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 106) [0601] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one using tert‐butyl 4‐({6‐[6‐(methylsulfanyl)‐3‐oxo‐2‐(prop‐2‐en‐1‐ yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐2‐yl}oxy)piperidine‐1‐carboxylate (184 mg) and 1‐methyl‐1H‐indazol‐5‐amine (1 equiv.). Yield: 140 mg TFA salt (62%) as a yellow powder. [0602] Example 143. Synthesis of 2-allyl-6-(1-methyl-1H-indazol-5-ylamino)-1-[6-(1- methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 109) [0603] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one using 6‐[(1‐methyl‐1H‐indazol‐5‐yl)amino]‐1‐[6‐(piperidin‐4‐ yloxy)pyridin‐2‐yl]‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one; trifluoroacetic acid salt (15 mg). Yield: 9 mg TFA salt (60%) as a pale-yellow powder. [0604] Example 144. Synthesis of 1-{6-[(S)-1-methyl-3-pyrrolidinyloxy]-2-pyridyl}-2- allyl-6-(1-methyl-1H-indazol-5-ylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 105) [0605] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one using tert-butyl (3S)-3-hydroxypyrrolidine-1-carboxylate. Yield: 10.4 mg, 62%. [0606] Example 145. Synthesis of 1-{6-[(S)-3-piperidyloxy]-2-pyridyl}-2-allyl-6-(1- methyl-1H-indazol-5-ylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 104) [0607] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one using 1‐methyl‐1H‐indazol‐5‐amine (1 equiv.) and tert‐butyl (3S)‐ 3‐({6‐[6‐(methylsulfanyl)‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐ yl]pyridin‐2‐yl}oxy)piperidine‐1‐carboxylate (135 mg) prepared from tert-butyl (3S)-3- hydroxypiperidine-1-carboxylate. Yield: 92 mg TFA salt (56%) as a yellow powder.
[0608] Example 146. Synthesis of 1-{6-[(R)-3-pyrrolidinyloxy]-2-pyridyl}-2-allyl-6-(1- methyl-1H-indazol-5-ylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 101) [0609] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one using 1-methyl-1H-indazol-5-amine and tert‐butyl (3R)‐3‐({6‐[6‐ (methylsulfanyl)‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐ 2‐yl}oxy)pyrrolidine‐1‐carboxylate made from tert-butyl (3R)-3-hydroxypyrrolidine-1- carboxylate. Yield: 8.1 mg, 21%. [0610] Example 147. Synthesis of 1-{6-[(S)-3-pyrrolidinyloxy]-2-pyridyl}-2-allyl-6-(1- methyl-1H-indazol-5-ylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 100) [0611] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one using 1-methyl-1H-indazol-5-amine and tert‐butyl (3S)‐3‐({6‐[6‐ (methylsulfanyl)‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐ 2‐yl}oxy)pyrrolidine‐1‐carboxylate made from tert-butyl (3S)-3-hydroxypyrrolidine-1- carboxylate. Yield: 55.1 mg, 60%. [0612] Example 148. Synthesis of 2-allyl-6-(1-methyl-1H-1,3-benzimidazol-5- ylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7- tetraazainden-3-one (Compound 211) [0613] mCPBA (<77% pure) (41.5 mg, assumed 0.241 mmol) in DCM (0.5 mL) was added to a stirred solution of tert-butyl 4-{6-[2-allyl-6-(methylthio)-3-oxo-1,2-dihydro-3H-1,2,5,7- tetraazainden-1-yl]-2-pyridyloxy}-1-piperidinecarboxylate (100 mg, 0.201mmol) in DCM (2.5 mL) at room temperature under nitrogen. The reaction controlled by LCMS. After 15 min, DCM was removed in vacuo, and the crude solubilized in MeCN (3 ml). Then 1-methyl-1H- 1,3-benzimidazol-5-ylamine (29.5 mg,0.201 mmol) and methane sulfonic acid (26 µL, 0.401 mmol) were added. The reaction mixture stirred at 60 °C in a closed vial. After 18 h, reaction mixture was allowed to cool to RT, and mCPBA quenched with 1M NaOH (5 mL) which was added dropwise. The aqueous phase was extracted with EtOAc (3x20 mL) then brine (20 mL). The combined organic layers were dried (MgSO4) and concentrated under reduced pressure to give the product as a yellow powder. The crude material was dissolved in DCM (5 ml), loaded onto a 10 g silica column and purified by flash chromatography (0- 100%, EtOAc: PE) to give the Boc protected compound [85 mg, 94 %] as a pale-yellow solid. This material (85mg, 0.131
mmol) in DCM (5mL) was treated with TFA (2.5 mL) for 2 h. The solvent was removed in vacuo and the crude was dissolved in EtOAc, washed with sat aq NaHCO
3, brine, dried (MgSO4), and concentrated. The resulting material was purified by with reversed phase chromatography (Gemini NX-C18,21*150 mm, water (0.1% TFA)/acetonitrile, gradient over 12 minutes, 25 ml/min). The pure fractions were pooled and concentrated to give 2-allyl-6-(1- methyl-1H-1,3-benzimidazol-5-ylamino)-1-[6-(4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one as a trifluoroacetic acid salt as a white solid [ 85 mg]. [0614] Example 149. Synthesis of 2-allyl-6-((1-methyl-1H-indol-5-yl)amino)-1-(6-((1- methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 186) [0615] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one using 1‐{6‐[(1‐methylpiperidin‐4‐yl)oxy]pyridin‐2‐yl}‐6‐(methyl sulfanyl)‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one (100 mg) and 1‐ methyl‐1H‐indol‐5‐amine (1.5 equiv.). Yield: 77 mg TFA salt (51%) as a powder. [0616] Example 150. Synthesis of 1-{6-[(R)-3-pyrrolidinylamino]-2-pyridyl}-2-allyl-6-(1- methyl-1H-indazol-5-ylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 102) [0617] tert-butyl (3R)-3-[(6-bromopyridin-2-yl)amino]pyrrolidine-1-carboxylate [0618] 2-Bromo-6-fluoropyridine (0.37 g, 2.1 mmol), DIPEA (6.3 mmol, 1.1 ml) and tert- butyl (3R)-3-aminopyrrolidine-1-carboxylate hydrochloride (0.52 g, 2.1 mmol) were mixed in 10 ml of DMSO. The reaction mixture was stirred at 100 °C for two days and partitioned between ethyl acetate and water. The organic phase was washed with water, sat. NaHCO
3 and brine, dried over MgSO4, filtered and concentrated. The residue was slurried with a mixture of heptane and ethyl acetate and collected by filtration giving 0.42 g (58%) of tert-butyl (3R)- 3-[(6-bromopyridin-2-yl)amino]pyrrolidine-1-carboxylate. [0619] Step 2 [0620] 6-(Methylsulfanyl)-2-(prop-2-en-1-yl)-1H,2H,3H-pyrazolo[3,4-d]pyrimidin-3-one (56 mg, 0.25 mmol), copper (I) iodide (52 mg, 0.27 mmol), potassium carbonate (104 mg, 0.75 mmol), 1,2-dimethylethylenediamine (44 mg, 0.50 mmol) and tert-butyl (3R)-3-[(6- bromopyridin-2-yl)amino]pyrrolidine-1-carboxylate (86 mg, 0.25 mmol) were mixed in 20 ml of dioxane under nitrogen. The reaction mixture was stirred at 90 °C overnight, diluted with ethyl acetate, filtered through celite and concentrated. The residue was purified with flash chromatography (silica, 10-40% ethyl acetate in petroleum ether).
[0621] 1-{6-[(R)-3-pyrrolidinylamino]-2-pyridyl}-2-allyl-6-(1-methyl-1H-indazol-5- ylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one [0622] The compound from Step 2 and MCPBA (77%, 31 mg, 0.14 mmol) were mixed in 5 ml of DCM. After two hours 1-methyl-1H-indazol-5-amine (37 mg, 0.25 mmol) was added. The reaction mixture was stirred at room temperature overnight. TFA (2 ml) was added and after 3 hours the solvent removed under reduced pressure. The residue was dissolved in methanol/water and purified with reversed phase chromatography (Gemini NX-C18, 21*150 mm, water (0.1% TFA)/acetonitrile, gradient over 12 minutes, 25 ml/min). The pure fractions were pooled and concentrated giving 13 mg (7% over two steps) of the title compound. [0623] Example 151. Synthesis of 6-[(1-Methyl-1H-indazol-5-yl)amino]-1-{6-[(3R)- piperidin-3-yloxy]pyridin-2-yl}-2-(prop-2-en-1-yl)-1H,2H,3H-pyrazolo[3,4-d]pyrimidin- 3-one; bis(trifluoroacetic acid) (Compound 103) [0624] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one using 1-methyl-1H-indazol-5-amine and tert-Butyl (3R)-3-({6- [6-(methylsulfanyl)-3-oxo-2-(prop-2-en-1-yl)-1H,2H,3H-pyrazolo[3,4-d]pyrimidin-1- yl]pyridin-2-yl}oxy)piperidine-1-carboxylate. Yield: 130 mg, 56%. [0625] Example 152. Synthesis of 6‐[(1‐methyl‐1H‐indazol‐5‐yl)amino]‐1‐[6‐(piperidin‐ 4‐yloxy)pyridin‐2‐yl]‐2‐propyl‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one (Compound 110) [0626] To a solution of 6‐[(1‐methyl‐1H‐indazol‐5‐yl)amino]‐1‐[6‐(piperidin‐4‐ yloxy)pyridin‐2‐yl]‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one; trifluoroacetic acid (60 mg, 0.098 mmol) in ethanol (5 mL) was added 10% palladium on charcoal (4.4 mg) and the mixture was stirred under hydrogen atmosphere (1 atm) at room temperature overnight. The solution was filtered through celite to remove catalyst and the celite pad was washed with methanol. The filtrate was concentrated under reduced pressure to give the crude product as a colorless oil. The crude product was purified by reversed phase chromatography and the pure fractions were pooled and lyophilized to give the title compound. Yield: 20 mg TFA salt (33%). [0627] Example 153. Synthesis of 6‐[(1‐methyl‐1H‐indazol‐5‐yl)amino]‐1‐{6‐[(1‐ methylpiperidin‐4‐yl)oxy]pyridin‐2‐yl}‐2‐propyl‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐ one (Compound 111) [0628] To a solution of 6‐[(1‐methyl‐1H‐indazol‐5‐yl)amino]‐1‐{6‐[(1‐methylpiperidin‐4‐ yl)oxy]pyridin‐2‐yl}‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one;
trifluoroacetic acid (41 mg, 0.066 mmol) in ethanol (4 mL) was added 10% palladium on charcoal (2.95 mg) and the mixture was stirred under hydrogen atmosphere (1 atm) at room temperature overnight. The solution was filtered through celite to remove catalyst and the celite pad was washed with methanol. The filtrate was concentrated under reduced pressure to give the crude product as a colorless oil, which was dissolved in acetonitrile and water, and lyophilized to give the title compound. Yield: 33 mg TFA salt (80%). [0629] Example 154. Synthesis of 1‐{6‐[(1‐methylpiperidin‐4‐yl)oxy]pyridin‐2‐yl}‐6‐[(2‐ methylpyridin‐4‐yl)amino]‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐ one (Compound 112) [0630] This compound was made using a similar method as described in the synthesis of 6‐ [(1‐methyl‐1H‐indazol‐5‐yl)amino]‐1‐{6‐[(1‐methylpiperidin‐4‐yl)oxy]pyridin‐2‐yl}‐2‐ propyl‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one using 6‐[(2‐methylpyridin‐4‐yl)amino]‐1‐ [6‐(piperidin‐4‐yloxy)pyridin‐2‐yl]‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐ 3‐one. Yield: 31 mg TFA salt (28%) as a powder. [0631] Example 155. Synthesis of 1-{6-[(R)-1-methyl-3-pyrrolidinyloxy]-2-pyridyl}-2- allyl-6-(1-methyl-1H-indazol-5-ylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 115) [0632] 2-allyl-1-(6-fluoropyridin-2-yl)-6-(methylsulfinyl)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one [0633] To a stirred solution of 2-allyl-1-(6-fluoropyridin-2-yl)-6-(methylthio)-1,2-dihydro- 3H-pyrazolo[3,4-d]pyrimidin-3-one (1 g, 3.15 mmol) in DCM (10 ml) was added m-CPBA (1.088 g, 6.30 mmol), the resulting reaction mixture was stirred at RT for 3h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was quenched with sodium bicarbonate and extracted with DCM to get crude (1 g, 1.920 mmol, 60.9 % yield) which was taken as such for the next step. [0634] 2-allyl-1-(6-fluoropyridin-2-yl)-6-((1-methyl-1H-indazol-5-yl)amino)-1,2-dihydro- 3H-pyrazolo[3,4-d]pyrimidin-3-one [0635] To a stirred solution of 2-allyl-1-(6-fluoropyridin-2-yl)-6-(methylsulfonyl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (1 g, 2.86 mmol) in acetic acid (10 ml) was added 1-methyl-1H-indazol-5-amine (3, 0.421 g, 2.86 mmol). The resulting reaction mixture was stirred at RT for 16h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was concentrated and quenched with ice- cold water, appeared solid solid was filtered and washed with MTBE (20 mL) to get the pure compound 2-allyl-1-(6-fluoropyridin-2-yl)-6-((1-methyl-1H-indazol-5-yl)amino)-1,2-
dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (800 mg, 1.767 mmol, 61.7 % yield as brown solid. [0636] (R)-2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(6-((1-methylpyrrolidin-3- yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0637] To a stirred solution of (R)-1-methylpyrrolidin-3-ol (5, 300 mg, 2.97 mmol) in THF (5 ml) was added NaH (60% in oil) (214 mg, 8.90 mmol) at 60
oC and stirred for 1 h. Then 2- allyl-1-(6-fluoropyridin-2-yl)-6-((1-methyl-1H-indazol-5-yl)amino)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one (4, 300 mg, 0.720 mmol) was added to the above reaction and allowed to stirred at RT for 16h. The progress of the reaction was monitored by TLC After completion of the reaction. Reaction was quenched with ice-cold water and extracted with DCM to get crude and concentrated under reduced pressure then submitted to prep HPLC (X-SELECT C18150M, 0.1% FA IN H
2O), collected fractions after lyophilization to get pure (R)-2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(6-((1-methylpyrrolidin-3- yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (90 mg, 0.179 mmol, 6.04 % yield). [0638] Example 156. Synthesis of 1‐(6‐{[(3R)‐1‐ethylpyrrolidin‐3‐yl]amino}pyridin‐2‐ yl)‐6‐[(1‐methyl‐1H‐indazol‐5‐yl)amino]‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐ d]pyrimidin‐3‐one (Compound 119) [0639] This compound was made using a similar method as described in the synthesis of 2- allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one using 6-[(1-methyl-1H-indazol-5-yl)amino]-2-(prop-2-en-1-yl)- 1-(6-{[(3R)-pyrrolidin-3-yl]amino}pyridin-2-yl)-1H,2H,3H-pyrazolo[3,4-d]pyrimidin-3-one; trifluoroacetic acid (45 mg) and acetaldehyde (excess). Yield: 15 mg TFA salt (32%) as a powder. [0640] Example 157. Synthesis of 6‐[(1‐methyl‐1H‐indazol‐5‐yl)amino]‐2‐(prop‐2‐en‐1‐ yl)‐1‐(6‐{[(3R)‐1‐(propan‐2‐yl)pyrrolidin‐3‐yl]amino}pyridin‐2‐yl)‐1H,2H,3H‐ pyrazolo[3,4‐d]pyrimidin‐3‐one (Compound 120) [0641] This compound was made using a similar method as described in the synthesis of 2- allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one using 6-[(1-methyl-1H-indazol-5-yl)amino]-2-(prop-2-en-1-yl)- 1-(6-{[(3R)-pyrrolidin-3-yl]amino}pyridin-2-yl)-1H,2H,3H-pyrazolo[3,4-d]pyrimidin-3-one; trifluoroacetic acid (45 mg) and acetone (excess). Yield: 30 mg TFA salt (63%) as a powder. [0642] Example 158. Synthesis of 6‐[(1‐methyl‐1H‐indazol‐5‐yl)amino]‐1‐{6‐[(piperidin‐ 4‐yl)amino]pyridin‐2‐yl}‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one
(Compound 122) [0643] This compound was made using a similar method as described in the synthesis of 2- allyl-6-((4-chlorophenyl)amino)-1-(6-(piperidin-4-ylamino)pyridin-2-yl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one using tert‐butyl 4‐({6‐[6‐(methylsulfanyl)‐3‐oxo‐2‐(prop‐2‐ en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐2‐yl}amino)piperidine‐1‐ carboxylate (182 mg) and 1‐methyl‐1H‐indazol‐5‐amine (1 equiv.). Yield: 107 mg TFA salt (48%) as a yellow powder. [0644] Example 159. Synthesis of 6‐(phenylamino)‐1‐{6‐[(piperidin‐4‐yl)amino]pyridin‐ 2‐yl}‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one (Compound 123) [0645] This compound was made using a similar method as described in the synthesis of 2- allyl-6-((4-chlorophenyl)amino)-1-(6-(piperidin-4-ylamino)pyridin-2-yl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one using tert‐butyl 4‐({6‐[6‐(methylsulfanyl)‐3‐oxo‐2‐(prop‐2‐ en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐2‐yl}amino)piperidine‐1‐ carboxylate (50 mg) and aniline (3 equiv.). Yield: 31 mg TFA salt (55%) as a yellow powder. [0646] Example 160. Synthesis of 6‐[(4‐fluorophenyl)amino]‐1‐{6‐[(piperidin‐4‐ yl)amino]pyridin‐2‐yl}‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one (Compound 125) [0647] This compound was made using a similar method as described in the synthesis of 2- allyl-6-((4-chlorophenyl)amino)-1-(6-(piperidin-4-ylamino)pyridin-2-yl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one using tert‐butyl 4‐({6‐[6‐(methylsulfanyl)‐3‐oxo‐2‐(prop‐2‐ en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐2‐yl}amino)piperidine‐1‐ carboxylate (50 mg) and 4‐fluoroaniline (2 equiv.). Yield: 37 mg TFA salt (64%) as a powder. [0648] Example 161. Synthesis of 6‐[(1‐methyl‐1H‐indazol‐5‐yl)amino]‐1‐{6‐[(1‐ methylpiperidin‐4‐yl)amino]pyridin‐2‐yl}‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐ d]pyrimidin‐3‐one (Compound 129) [0649] This compound was made using a similar method as described in the synthesis of 2- allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using 6‐[(1‐methyl‐1H‐indazol‐5‐yl)amino]‐1‐ {6‐[(piperidin‐4‐yl)amino]pyridin‐2‐yl}‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐ d]pyrimidin‐3‐one; trifluoroacetic acid (38 mg). Yield: 20 mg (52%) as a powder. [0650] Example 162. Synthesis of 2‐methyl‐4‐[(3‐oxo‐1‐{6‐[(piperidin‐4‐ yl)amino]pyridin‐2‐yl}‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐6‐ yl)amino]benzonitrile (Compound 134)
[0651] This compound was made using a similar method as described in the synthesis of 2- allyl-6-(2-methoxy-4-pyridylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro- 3H-1,2,5,7-tetraazainden-3-one using tert‐butyl 4‐[(6‐{6‐[(4‐cyano‐3‐methylphenyl)amino]‐ 3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl}pyridin‐2‐ yl)oxy]piperidine‐1‐carboxylate followed by deprotection of the boc-group. Yield: 15.3 mg TFA salt (39%) as a white powder. [0652] Example 163. Synthesis of 1‐{6‐[(piperidin‐4‐yl)amino]pyridin‐2‐yl}‐2‐(prop‐2‐ en‐1‐yl)‐6‐{[4‐(trifluoromethoxy)phenyl]amino}‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐ one (Compound 135) [0653] This compound was made using a similar method as described in the synthesis of 2- allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using tert‐butyl 4‐({6‐[6‐(methylsulfanyl)‐3‐ oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐2‐ yl}amino)piperidine‐1‐carboxylate (50 mg) and 4‐(trifluoromethoxy)aniline (2 equiv.). Yield: 27 mg (51%) as a powder. [0654] Example 164. Synthesis of 6‐{[3‐methyl‐4‐(trifluoromethoxy)phenyl]amino}‐1‐{6‐ [(piperidin‐4‐yl)amino]pyridin‐2‐yl}‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐ d]pyrimidin‐3‐one (Compound 136) [0655] This compound was made using a similar method as described in the synthesis of 2- allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using tert‐butyl 4‐({6‐[6‐(methylsulfanyl)‐3‐ oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐2‐ yl}amino)piperidine‐1‐carboxylate (50 mg) and 3‐methyl‐4‐(trifluoromethoxy)aniline (2 equiv.). Yield: 29 mg TFA salt (44%) as a powder. [0656] Example 165. Synthesis of 6‐[(4‐bromophenyl)amino]‐1‐{6‐[(piperidin‐4‐ yl)amino]pyridin‐2‐yl}‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one (Compound 143) [0657] This compound was made using a similar method as described in the synthesis of 2- allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using tert‐butyl 4‐({6‐[6‐(methylsulfanyl)‐3‐ oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐2‐ yl}amino)piperidine‐1‐carboxylate (60 mg) and 4‐bromoaniline (2 equiv.). Yield: 27.5 mg (44%) as a white powder. [0658] Example 166. Synthesis of 6‐[(3‐bromo‐5‐chlorophenyl)amino]‐1‐{6‐[(piperidin‐
4‐yl)amino]pyridin‐2‐yl}‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one (Compound 144) [0659] This compound was made using a similar method as described in the synthesis of 2- allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using tert‐butyl 4‐({6‐[6‐(methylsulfanyl)‐3‐ oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐2‐ yl}amino)piperidine‐1‐carboxylate (50 mg), 3‐bromo‐5‐chloroaniline (2 equiv.) and methanesulfonic acid (1 equiv.). Yield: 25 mg TFA salt (37%) as a powder. [0660] Example 167. Synthesis of 6‐[(4‐chlorophenyl)amino]‐1‐{6‐[(1‐methylpiperidin‐4‐ yl)(propyl)amino]pyridin‐2‐yl}‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐ 3‐one (Compound 149) [0661] tert‐butyl 4‐[(6‐bromopyridin‐2‐yl)(propyl)amino]piperidine‐1‐carboxylate [0662] sodium hydride 60% in mineral oil (113 mg, 2.82 mmol, 1.3 equiv.) was added to as stirred solution of tert‐butyl 4‐[(6‐bromopyridin‐2‐yl)amino]piperidine‐1‐carboxylate (773 mg, 2.17 mmol, 1 equiv.) and propyl methanesulfonate (360 mg, 2.6 mmol, 1.2 equiv.) in DMF (8 mL) at 0 °C. Upon complete addition, the mixture was brought to room temperature and stirred for 40 min. The reaction mixture was diluted with water (50 mL) and extracted with ethyl acetate (3×120 mL). The organic layer was washed with water (4×100 mL), brine (100 mL) and then dried over magnesium sulfate. The organic layer was concentrated to residues under reduced pressure. The residues were purified by flash chromatography on silica, eluting with a gradient of 5-70% ethyl acetate in petroleum ether to give the title compound (470 mg, 54%) as a colorless oil. [0663] tert‐butyl 4‐({6‐[6‐(methylsulfanyl)‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐ pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐2‐yl}(propyl)amino)piperidine‐1‐carboxylate [0664] This intermediate was made using a similar method as described in the synthesis of tert-butyl 4-((6-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1- yl)pyridin-2-yl)amino)piperidine-1-carboxylate using tert‐butyl 4‐[(6‐bromopyridin‐2‐ yl)(propyl)amino]piperidine‐1‐carboxylate (475 mg). Yield: 519 mg (81%). [0665] 6‐[(4‐chlorophenyl)amino]‐1‐{6‐[(1‐methylpiperidin‐4‐yl)(propyl)amino]pyridin‐2‐ yl}‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one [0666] The title compound was made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using 6‐[(4‐chlorophenyl)amino]‐1‐{6‐ [(piperidin‐4‐yl)(propyl)amino]pyridin‐2‐yl}‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐
d]pyrimidin‐3‐one; trifluoroacetic acid (85 mg). Yield: 65 mg TFA salt (75%) as a powder. [0667] Example 168. Synthesis of 6‐{[3‐methyl‐5‐(trifluoromethoxy)phenyl]amino}‐1‐{6‐ [(piperidin‐4‐yl)amino]pyridin‐2‐yl}‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐ d]pyrimidin‐3‐one (Compound 155) [0668] This compound was made using a similar method as described in the synthesis of 2- allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using tert‐butyl 4‐({6‐[6‐(methylsulfanyl)‐3‐ oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐2‐ yl}amino)piperidine‐1‐carboxylate (100 mg) and 3‐methyl‐5‐(trifluoromethoxy)aniline (1.5 equiv.). Yield: 60 mg TFA salt (46%) as a powder. [0669] Example 169. Synthesis of 6‐[(4‐chlorophenyl)amino]‐1‐{6‐[methyl(piperidin‐4‐ yl)amino]pyridin‐2‐yl}‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one (Compound 156) [0670] This compound was made using a similar method as described in the synthesis of : 6‐ [(4‐chlorophenyl)amino]‐1‐{6‐[(1‐methylpiperidin‐4‐yl)(propyl)amino]pyridin‐2‐yl}‐2‐ (prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one using tert‐butyl 4‐[methyl({6‐[6‐ (methylsulfanyl)‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐ 2‐yl})amino]piperidine‐1‐carboxylate (200 mg) and 4‐chloroaniline (1 equiv.). Yield: 112 mg (58%) as a white powder. [0671] Example 170. Synthesis of 6‐[(4‐chlorophenyl)amino]‐1‐{6‐[methyl(1‐ methylpiperidin‐4‐yl)amino]pyridin‐2‐yl}‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐ d]pyrimidin‐3‐one (Compound 157) [0672] This compound was made using a similar method as described in the synthesis of : 6‐ [(4‐chlorophenyl)amino]‐1‐{6‐[(1‐methylpiperidin‐4‐yl)(propyl)amino]pyridin‐2‐yl}‐2‐ (prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one using 6‐[(4‐ chlorophenyl)amino]‐1‐{6‐[methyl(piperidin‐4‐yl)amino]pyridin‐2‐yl}‐2‐(prop‐2‐en‐1‐yl)‐ 1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one (65 mg). Yield: 68 mg TFA salt (83%) as a pale- yellow powder. [0673] Example 171. Synthesis of 6‐[(4‐chlorophenyl)amino]‐1‐{6‐[(3R)‐piperidin‐3‐ yloxy]pyridin‐2‐yl}‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one (Compound 159) [0674] This compound was made using a similar method as described in the synthesis of 2- allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using tert‐butyl 4‐({6‐[6‐(methylsulfanyl)‐3‐
oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐2‐ yl}amino)piperidine‐1‐carboxylate (166 mg) and 4-chloroaniline (1 equiv.). Yield: 150 mg TFA salt (76%) as a yellow powder. [0675] Example 172. Synthesis of 6‐[(4‐chlorophenyl)amino]‐1‐(6‐{[(3S)‐1‐ methylpiperidin‐3‐yl]oxy}pyridin‐2‐yl)‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐ d]pyrimidin‐3‐one (Compound 162) [0676] This compound was made using a similar method as described in the synthesis of 2- allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using 6‐[(4‐chlorophenyl)amino]‐1‐{6‐[(3R)‐ piperidin‐3‐yloxy]pyridin‐2‐yl}‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐ one; trifluoroacetic acid (kdh-0088) (150 mg). Yield: 82 mg free base (53%) as a powder. [0677] Example 173. Synthesis of 1‐{6‐[methyl(piperidin‐4‐yl)amino]pyridin‐2‐yl}‐2‐ (prop‐2‐en‐1‐yl)‐6‐{[1‐(propan‐2‐yl)‐1H‐pyrazol‐4‐yl]amino}‐1H,2H,3H‐pyrazolo[3,4‐ d]pyrimidin‐3‐one (Compound 169) [0678] This compound was made using a similar method as described in the synthesis of 6‐ [(4‐chlorophenyl)amino]‐1‐{6‐[(1‐methylpiperidin‐4‐yl)(propyl)amino]pyridin‐2‐yl}‐2‐ (prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one using tert‐butyl 4‐[methyl({6‐[6‐ (methylsulfanyl)‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐ 2‐yl})amino]piperidine‐1‐carboxylate (200 mg) and 1-isopropyl-4-pyrazolamine (1.5 equiv.). Yield: 139 mg TFA salt (59%) as a powder. [0679] Example 174. Synthesis of 1‐{6‐[methyl(piperidin‐4‐yl)amino]pyridin‐2‐yl}‐6‐{[1‐ (2‐methylpropyl)‐1H‐pyrazol‐4‐yl]amino}‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐ d]pyrimidin‐3‐one (Compound 170) [0680] This compound was made using a similar method as described in the synthesis of 6‐ [(4‐chlorophenyl)amino]‐1‐{6‐[(1‐methylpiperidin‐4‐yl)(propyl)amino]pyridin‐2‐yl}‐2‐ (prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one using tert‐butyl 4‐[methyl({6‐[6‐ (methylsulfanyl)‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐ 2‐yl})amino]piperidine‐1‐carboxylate (200 mg) and 1-isobutyl-4-pyrazolamine (1.5 equiv.). Yield: 153 mg TFA salt (63%) as a powder. [0681] Example 175. Synthesis of 1‐{6‐[methyl(1‐methylpiperidin‐4‐yl)amino]pyridin‐2‐ yl}‐2‐(prop‐2‐en‐1‐yl)‐6‐{[1‐(propan‐2‐yl)‐1H‐pyrazol‐4‐yl]amino}‐1H,2H,3H‐ pyrazolo[3,4‐d]pyrimidin‐3‐one (Compound 174) [0682] This compound was made using a similar method as described in the synthesis of 2- allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2-
dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using 1‐{6‐[methyl(piperidin‐4‐ yl)amino]pyridin‐2‐yl}‐2‐(prop‐2‐en‐1‐yl)‐6‐{[1‐(propan‐2‐yl)‐1H‐pyrazol‐4‐yl]amino}‐ 1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one; trifluoroacetic acid (110 mg). Yield: 37 mg TFA salt (33%) as a powder. [0683] Example 176. Synthesis of 1‐{6‐[methyl(1‐methylpiperidin‐4‐yl)amino]pyridin‐2‐ yl}‐6‐{[1‐(2‐methylpropyl)‐1H‐pyrazol‐4‐yl]amino}‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐ pyrazolo[3,4‐d]pyrimidin‐3‐one (Compound 175) [0684] This compound was made using a similar method as described in the synthesis of 2- allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using 1‐{6‐[methyl(piperidin‐4‐ yl)amino]pyridin‐2‐yl}‐6‐{[1‐(2‐methylpropyl)‐1H‐pyrazol‐4‐yl]amino}‐2‐(prop‐2‐en‐1‐yl)‐ 1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one; trifluoroacetic acid (126 mg). Yield: 67 mg TFA salt (52%) as a powder. [0685] Example 177. Synthesis of 1‐{6‐[(3R)‐1‐azabicyclo[2.2.2]octan‐3‐yloxy]pyridin‐2‐ yl}‐6‐[(4‐chlorophenyl)amino]‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐ 3‐one (Compound 176) [0686] This compound was made using a similar method as described in the synthesis of (R)- 2-allyl-6-((1-methyl-1H-pyrazol-3-yl)amino)-1-(6-(quinuclidin-3-yloxy)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using 1‐{6‐[(3R)‐1‐azabicyclo[2.2.2]octan‐3‐ yloxy]pyridin‐2‐yl}‐6‐(methylsulfanyl)‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐ d]pyrimidin‐3‐one (100 mg) and 4‐chloroaniline (2 equiv.). Yield: 67 mg TFA salt (46%) as a yellow powder. [0687] Example 178. Synthesis of 2-allyl-1-[6-(4-piperidyloxy)-2-pyridyl]-6-(1-propyl-4- pyrazolylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 179) [0688] This compound was made using a similar method as described in the synthesis of 2- allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using tert-butyl 4-{6-[2-allyl-6-(methylthio)-3- oxo-1,2-dihydro-3H-1,2,5,7-tetraazainden-1-yl]-2-pyridyloxy}-1-piperidinecarboxylate (123 mg) and 1-propyl-4-pyrazolylamine (48.9 mg). Yield: 12 mg TFA salt. [0689] Example 179. Synthesis of 1‐{6‐[methyl(piperidin‐4‐yl)amino]pyridin‐2‐yl}‐6‐[(1‐ methyl‐1H‐pyrazol‐4‐yl)amino]‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐ 3‐one (Compound 182) [0690] This compound was made using a similar method as described in the synthesis of 6‐ [(4‐chlorophenyl)amino]‐1‐{6‐[(1‐methylpiperidin‐4‐yl)(propyl)amino]pyridin‐2‐yl}‐2‐
(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one using tert‐butyl 4‐[methyl({6‐[6‐ (methylsulfanyl)‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐ 2‐yl})amino]piperidine‐1‐carboxylate (200 mg) and 1-methyl-4-pyrazolamine (1 equiv.) to give the crude free base intermediate (227 mg) as a brown oil of which 13% was purified by prep-HPLC. Yield: 13.4 mg TFA salt (45%) as a powder. [0691] Example 180. Synthesis of 1-[6-(N-methyl-N-4-piperidylamino)-2-pyridyl]-2- allyl-6-[1-(2-fluoro-2-methylpropyl)-4-pyrazolylamino]-1,2-dihydro-3H-1,2,5,7- tetraazainden-3-one (Compound 183) [0692] This compound was made using a similar method as described in the synthesis of 6‐ [(4‐chlorophenyl)amino]‐1‐{6‐[(1‐methylpiperidin‐4‐yl)(propyl)amino]pyridin‐2‐yl}‐2‐ (prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one using tert-butyl 4-({6-[2-allyl-6- (methylthio)-3-oxo-1,2-dihydro-3H-1,2,5,7-tetraazainden-1-yl]-2-pyridyl}-N-methylamino)- 1-piperidinecarboxylate (200 mg) and 1-(2-fluoro-2-methylpropyl)-4-pyrazolylamine (67.6 mg) followed by deprotection of the boc-group. Yield 14.5 mg (TFA salt). [0693] Example 181. Synthesis of 1‐{6‐[methyl(1‐methylpiperidin‐4‐yl)amino]pyridin‐2‐ yl}‐6‐[(1‐methyl‐1H‐pyrazol‐4‐yl)amino]‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐ d]pyrimidin‐3‐one (Compound 184) [0694] This compound was made using a similar method as described in the synthesis of 6‐ [(4‐chlorophenyl)amino]‐1‐{6‐[(1‐methylpiperidin‐4‐yl)(propyl)amino]pyridin‐2‐yl}‐2‐ (prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one using 1‐{6‐[methyl(piperidin‐4‐ yl)amino]pyridin‐2‐yl}‐6‐[(1‐methyl‐1H‐pyrazol‐4‐yl)amino]‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐ pyrazolo[3,4‐d]pyrimidin‐3‐one (197 mg, crude). Yield: 50 mg TFA salt (20%) as a powder. [0695] Example 182. Synthesis of 6‐{[1‐(2‐fluoro‐2‐methylpropyl)‐1H‐pyrazol‐4‐ yl]amino}‐1‐{6‐[methyl(1‐methylpiperidin‐4‐yl)amino]pyridin‐2‐yl}‐2‐(prop‐2‐en‐1‐yl)‐ 1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one (Compound 185) [0696] This compound was made using a similar method as described in the synthesis of 6‐ [(4‐chlorophenyl)amino]‐1‐{6‐[(1‐methylpiperidin‐4‐yl)(propyl)amino]pyridin‐2‐yl}‐2‐ (prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one using 6‐{[1‐(2‐fluoro‐2‐ methylpropyl)‐1H‐pyrazol‐4‐yl]amino}‐1‐{6‐[methyl(piperidin‐4‐yl)amino]pyridin‐2‐yl}‐2‐ (prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one (290 mg, crude). Yield: 112 mg TFA salt (31%) as a powder. [0697] Example 183. Synthesis of 1-{6-[(R)-1-methyl-3-piperidyloxy]-2-pyridyl}-2-allyl- 6-(p-chlorophenylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 187) [0698] This compound was made using a similar method as described in the synthesis of 2-
allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using 1-{6-[(R)-3-piperidyloxy]-2-pyridyl}-2- allyl-6-(p-chlorophenylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (25 mg). Yield 20 mg (TFA salt). [0699] Example 184. Synthesis of 6‐[(1‐methyl‐1H‐pyrazol‐4‐yl)amino]‐1‐(6‐{[(trans)‐8‐ methyl‐8‐azabicyclo[3.2.1]octan‐3‐yl]oxy}pyridin‐2‐yl)‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐ pyrazolo[3,4‐d]pyrimidin‐3‐one (Compound 190) and 6‐[(1‐methyl‐1H‐pyrazol‐4‐ yl)amino]‐1‐(6‐{[(cis)‐8‐methyl‐8‐azabicyclo[3.2.1]octan‐3‐yl]oxy}pyridin‐2‐yl)‐2‐(prop‐ 2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one (Compound 189) [0700] tert‐butyl 3‐[(6‐bromopyridin‐2‐yl)oxy]‐8‐azabicyclo[3.2.1]octane‐8‐carboxylate [0701] This intermediate was made using a similar method as described in the synthesis tert- butyl 4-((6-bromopyridin-2-yl)oxy)piperidine-1-carboxylate using 2,6-dibromopyridine (2 g) and tert‐butyl 3‐hydroxy‐8‐azabicyclo[3.2.1]octane‐8‐carboxylate (1 equiv.). Yield: 2.4 g (71%) as a colourless oil. Mixture of diastereomers. [0702] tert‐butyl 3‐({6‐[6‐(methylsulfanyl)‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐ pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐2‐yl}oxy)‐8‐azabicyclo[3.2.1]octane‐8‐carboxylate [0703] This intermediate was made using a similar method as described in the synthesis of tert-butyl 4-((6-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1- yl)pyridin-2-yl)oxy)piperidine-1-carboxylate using tert‐butyl 3‐[(6‐bromopyridin‐2‐yl)oxy]‐ 8‐azabicyclo[3.2.1]octane‐8‐carboxylate (850 mg). Purified by flash chromatography (SiO2, 0-40% ethyl acetate in petroleum ether). Yield: 687 mg mixture of diastereomers (59%) as an orange oil. [0704] 1‐(6‐{8‐azabicyclo[3.2.1]octan‐3‐yloxy}pyridin‐2‐yl)‐6‐[(1‐methyl‐1H‐pyrazol‐4‐ yl)amino]‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one [0705] This compound was made using a similar method as described in the synthesis 2- allyl-6-((4-chlorophenyl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one using tert‐butyl 3‐({6‐[6‐(methylsulfanyl)‐3‐oxo‐2‐(prop‐2‐ en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐2‐yl}oxy)‐8‐ azabicyclo[3.2.1]octane‐8‐carboxylate (400 mg) and 1‐methyl‐1H‐pyrazol‐4‐amine hydrochloride (1.1 equiv.). Yield: 437 mg (crude) mixture of diastereomers as a brown oil. [0706] 6‐[(1‐methyl‐1H‐pyrazol‐4‐yl)amino]‐1‐(6‐{[(trans)‐8‐methyl‐8‐ azabicyclo[3.2.1]octan‐3‐yl]oxy}pyridin‐2‐yl)‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐ d]pyrimidin‐3‐one and 6‐[(1‐methyl‐1H‐pyrazol‐4‐yl)amino]‐1‐(6‐{[(cis)‐8‐methyl‐8‐ azabicyclo[3.2.1]octan‐3‐yl]oxy}pyridin‐2‐yl)‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐
d]pyrimidin‐3‐one [0707] These compounds were made using a similar method as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using 1‐(6‐{8‐azabicyclo[3.2.1]octan‐3‐ yloxy}pyridin‐2‐yl)‐6‐[(1‐methyl‐1H‐pyrazol‐4‐yl)amino]‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐ pyrazolo[3,4‐d]pyrimidin‐3‐one (422 mg, crude, mixture of diastereomers). The diastereomers were separated by prep-HPLC on C18 (CH3CN/H
2O+0.1%NH3) to yield 27 mg of Compound 189 and 56 mg of Compound 190. [0708] Example 185. Synthesis of 2-allyl-6-(1-isopropyl-4-pyrazolylamino)-1-{6-(9- methyl-9-azabicyclo[3.3.1]non-3-yloxy)-2-pyridyl}-1,2-dihydro-3H-1,2,5,7- tetraazainden-3-one (Compound 193) [0709] This compound was made using a similar method as described in the synthesis of allyl-6-(p-bromophenylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H- 1,2,5,7-tetraazainden-3-one. Yield 35 mg. [0710] Example 186. Synthesis of 6‐[(2,6‐dimethylpyridin‐4‐yl)amino]‐1‐{6‐[(1‐ methylpiperidin‐4‐yl)oxy]pyridin‐2‐yl}‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐ d]pyrimidin‐3‐one (Compound 199) [0711] This compound was made using a similar method as described in the synthesis of 2- allyl-6-(2-methoxy-4-pyridylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro- 3H-1,2,5,7-tetraazainden-3-one using 6‐[(2,6‐dimethylpyridin‐4‐yl)amino]‐1‐[6‐(piperidin‐4‐ yloxy)pyridin‐2‐yl]‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one (crude). Yield: 67 mg TFA salt as a powder. [0712] Example 187. Synthesis of 6‐{[2‐methyl‐6‐(trifluoromethyl)pyridin‐4‐yl]amino}‐ 1‐{6‐[(1‐methylpiperidin‐4‐yl)oxy]pyridin‐2‐yl}‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐ pyrazolo[3,4‐d]pyrimidin‐3‐one (Compound 202) [0713] This compound was made using a similar method as described in the synthesis of 2- allyl-6-(2-methoxy-4-pyridylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro- 3H-1,2,5,7-tetraazainden-3-one using 6‐[(2,6‐dimethylpyridin‐4‐yl)amino]‐1‐[6‐(piperidin‐4‐ yloxy)pyridin‐2‐yl]‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one (crude). Yield: 105 mg TFA salt as a powder. [0714] Example 188. Synthesis of 2‐methyl‐4‐[(1‐{6‐[(1‐methylpiperidin‐4‐ yl)oxy]pyridin‐2‐yl}‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐6‐ yl)amino]benzonitrile (Compound 204) [0715] This compound was made using a similar method as described in the synthesis of 2-
allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using 2‐methyl‐4‐({3‐oxo‐1‐[6‐(piperidin‐4‐ yloxy)pyridin‐2‐yl]‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐6‐ yl}amino)benzonitrile (crude). Yield: 28 mg TFA salt as a powder. [0716] Example 189. Synthesis of 6‐[(3‐fluoro‐5‐methylphenyl)amino]‐1‐{6‐[(1‐ methylpiperidin‐4‐yl)oxy]pyridin‐2‐yl}‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐ d]pyrimidin‐3‐one (Compound 205) [0717] This compound was made using a similar method as described in the synthesis of 2- allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using 1‐{6‐[(1‐methylpiperidin‐4‐ yl)oxy]pyridin‐2‐yl}‐6‐(methylsulfanyl)‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐ d]pyrimidin‐3‐one (100 mg) and 3-fluoro-5-methylaniline (1 equiv.). Yield: 47 mg TFA salt (32%) as a white powder. [0718] Example 190. Synthesis of 6‐[(4‐fluoro‐3‐methylphenyl)amino]‐1‐{6‐[(1‐ methylpiperidin‐4‐yl)oxy]pyridin‐2‐yl}‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐ d]pyrimidin‐3‐one (Compound 206) [0719] This compound was made using a similar method as described in the synthesis of 2- allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using 1‐{6‐[(1‐methylpiperidin‐4‐ yl)oxy]pyridin‐2‐yl}‐6‐(methylsulfanyl)‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐ d]pyrimidin‐3‐one (100 mg) and 4-fluoro-3-methylaniline (1 equiv.). Yield: 30 mg TFA salt (21%) as a powder. [0720] Example 191. Synthesis of 6‐[(4‐fluorophenyl)amino]‐1‐{6‐[(1‐methylpiperidin‐4‐ yl)oxy]pyridin‐2‐yl}‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one (Compound 207) [0721] This compound was made using a similar method as described in the synthesis of 2- allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using 1‐{6‐[(1‐methylpiperidin‐4‐ yl)oxy]pyridin‐2‐yl}‐6‐(methylsulfanyl)‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐ d]pyrimidin‐3‐one (100 mg) and 4-fluoroaniline (1 equiv.). Yield: 30 mg TFA salt (21%) as a powder. [0722] Example 192. Synthesis of 2-allyl-6-(benzo[d]thiazol-5-ylamino)-1-(6-(piperidin- 4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 246) and 2-allyl-6-(benzo[d]thiazol-5-ylamino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2-
dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 209) [0723] tert-butyl 4-((6-(2-allyl-6-(benzo[d]thiazol-5-ylamino)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [0724] To a stirred solution tert-butyl 4-((6-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (1.2 g, 2.262 mmol) in Acetic acid (20 mL) was added benzo[d]thiazol-5-amine (0.374 g, 2.488 mmol) at room temperature. The resultant reaction mixture was subjected to stirring at 25 °C for 16 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was directly concentrated under reduced pressure, and the residue was diluted with water and extracted with 10% methanol-DCM (50 mL x 2). The combined organic layer was dried over Na2SO4, filtered, and concentrated under reduced pressure. The above crude was purified by flash column chromatography (silica gel, 100-200 mesh size) using ethyl acetate-hexane (50-60%) as an eluent to obtain tert-butyl 4-((6-(2-allyl-6- (benzo[d]thiazol-5-ylamino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2- yl)oxy)piperidine-1-carboxylate (3, 1 g, 1.648 mmol, 72.9 % yield) as a brown solid. [0725] 2-allyl-6-(benzo[d]thiazol-5-ylamino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 246) [0726] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-(benzo[d]thiazol-5-ylamino)-3-oxo- 2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (1 g, 1.665 mmol) in 1,4-dioxane (5 mL), was added 4M HCl in 1,4-dioxane (2.0 mL) at 0 °C. The resulting reaction mixture was stirred at room temperature for 4 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was concentrated under reduced pressure. The resultant crude (300 mg) residue was purified by prep. HPLC X-Select C18 (19*250, 5mL), Mobile phase A: 0.1 M FA in H
2O, Mobile phase B: acetonitrile) to get 2-allyl-6-(benzo[d]thiazol-5-ylamino)-1-(6-(piperidin-4-yloxy)pyridin- 2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 246, 130 mg, 0.260 mmol, 15.60 % yield) as an off white-solid. The remaining 600 mg was taken as such for next step without further purification. [0727] 2-allyl-6-(benzo[d]thiazol-5-ylamino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2- yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 209) [0728] To a stirred solution of 2-allyl-6-(benzo[d]thiazol-5-ylamino)-1-(6-(piperidin-4- yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (500 mg, 0.999 mmol) in THF (10 ml) was 20% aq. formaldehyde (405 mg, 4.99 mmol) was added at 25 °C. The reaction mixture was stirred at 25 °C for 30 min. After 30 min sodium triacetoxyborohydride
(STAB 635 mg, 3.00 mmol) was added portion wise under inert atmosphere. After the complete addition of STAB, the reaction mixture was stirred to 25 °C and continued to stir for 1 h. The progress of the reaction was monitored by LCMS after completion of the reaction. The reaction mixture was quenched by 10% NaOH solution and extracted with 10% methanol-DCM. Organic layers were dried over sodium sulfate and concentrated over a vacuum to afford crude compound. Then crude compound was purified by prep HPLC. After prep, HPLC pure fractions were lyophilized to get 2-allyl-6-(benzo[d]thiazol-5-ylamino)-1- (6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3- one (80 mg, 0.428 mmol, 17 % yield) as an pale yellow solid. [0729] Example 193. Synthesis of 6‐[(1,3‐benzothiazol‐6‐yl)amino]‐1‐{6‐[(1‐ methylpiperidin‐4‐yl)oxy]pyridin‐2‐yl}‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐ d]pyrimidin‐3‐one (Compound 212) [0730] This compound was made using a similar method as described in the synthesis of 2- allyl-6-(2-methoxy-4-pyridylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro- 3H-1,2,5,7-tetraazainden-3-one using 6‐[(1,3‐benzothiazol‐6‐yl)amino]‐1‐[6‐(piperidin‐4‐ yloxy)pyridin‐2‐yl]‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one (21 mg, crude). Yield: 19 mg TFA salt (80%) as a pale-yellow powder. [0731] Example 194. Synthesis of 6‐[(1,2‐benzoxazol‐6‐yl)amino]‐1‐[6‐(piperidin‐4‐ yloxy)pyridin‐2‐yl]‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one (Compound 214) [0732] This compound was made using a similar method as described in the synthesis of 2- allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using tert‐butyl 4‐({6‐[6‐(methylsulfanyl)‐3‐ oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐2‐ yl}oxy)piperidine‐1‐carboxylate (150 mg) and 1,2‐benzoxazol‐6‐amine (2 equiv.). Yield: 145 mg. [0733] Example 195. Synthesis of 2-allyl-1-(3-(methyl(1-methylpiperidin-4- yl)amino)phenyl)-6-((1-methyl-1H-indazol-5-yl)amino)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (Compound 217) [0734] 2-allyl-6-(methylthio)-1-(3-nitrophenyl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3- one [0735] To a solution of 2-allyl-6-(methylthio)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3- one (1.2 g, 5.40 mmol) in dichloroethane (15 mL) was added 3-nitrophenyl boronic acid (1.352 g, 8.10 mmol), sodium carbonate (1.707 g, 16.20 mmol) and copper (II) acetate (0.49
g, 2.70 mmol) followed by pyridine (0.169 g, 1.080 mmol) and the mixture was stirred at room temperature and the temperature raised to 70 °C and stirred for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mass was filtered through celite and washed with 10% MeOH in DCM (2 X 100 mL). The combined organic layers were dried over anhydrous Na2SO4, evaporated under reduced pressure to give the crude compound which was purified by column chromatography (silica mesh 100-200 at eluent of 70-100% Ethyl acetate and hexane) to get the pure compound 2- allyl-6-(methylthio)-1-(3-nitrophenyl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (700 mg, 1.794 mmol, 33.2 % yield) as a white solid. [0736] 2-allyl-6-(methylsulfonyl)-1-(3-nitrophenyl)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one [0737] To a stirred solution of 2-allyl-6-(methylthio)-1-(3-nitrophenyl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one (50 mg, 0.146 mmol) in DCM (10 ml) was added mCPBA (53.7 mg, 0.218 mmol) at room temperature under inert atmosphere, and the mixture was stirred for 2 h. The progress of the reaction was monitored by TLC and UPLC. After completion of the reaction, the reaction mixture was quenched with aq.10% sodium bicarbonate solution (10 mL) and extracted with 10% MeOH in DCM (2 X 50 mL). The combined organic layers were washed with brine (100 mL), dried over anhydrous sodium sulfate, filtered, and concentrated under reduced pressure to give the crude compound 2-allyl- 6-(methylsulfonyl)-1-(3-nitrophenyl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (30 mg, 0.024 mmol, 16.47 % yield) as an off-white solid. This crude compound was taken as such for the next step without further purification. [0738] 2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(3-nitrophenyl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one [0739] To a stirred solution of 2-allyl-6-(methylthio)-1-(3-nitrophenyl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one (0.7 g, 2.039 mmol) in AcOH (5 mL) was added 1-methyl- 1H-indazol-5-amine (0.3 g, 2.039 mmol) and the mixture was allowed to stir for 16 h at room temperature. The progress of the reaction was monitored by TLC and UPLC. After completion of the reaction, solvents were evaporated under reduced pressure and the residue obtained was quenched with 10% aq. sodium bicarbonate solution (100 mL) and extracted with ethyl acetate (2 X 300 mL). The combined organic extracts were washed with brine (100 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to give the crude compound which was purified by column chromatography (silica mesh 100- 200 at eluent of 10-20% ethyl acetate and hexane) to get the pure compound 2-allyl-6-((1-
methyl-1H-indazol-5-yl)amino)-1-(3-nitrophenyl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin- 3-one (600 mg, 1.221 mmol, 66.51 % yield) as a yellow solid. [0740] tert-butyl (2-allyl-1-(3-nitrophenyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin- 6-yl)(1-methyl-1H-indazol-5-yl)carbamate [0741] To a stirred solution of 2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(3- nitrophenyl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (0.2 g, 0.452 mmol) in DCM (5 mL) was added TEA (0.452 mmol) and Boc anhydride (0.148 g, 0.678 mmol) at 0 °C under inert atmosphere and the resulting mixture was allowed to stir for 16 h at room temperature. The progress of the reaction was monitored by TLC and UPLC. After completion of the reaction, the reaction mixture was diluted with water (100 mL) and extracted with ethyl acetate (2 X 200 mL). The combined organic layers were washed with brine (100 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to give tert- butyl (2-allyl-1-(3-nitrophenyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-6-yl)(1- methyl-1H-indazol-5-yl)carbamate (250 mg, 0.424 mmol, 94 % yield) as a white solid. [0742] tert-butyl (2-allyl-1-(3-aminophenyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-6-yl)(1-methyl-1H-indazol-5-yl)carbamate [0743] To a stirred solution of tert-butyl (2-allyl-1-(3-nitrophenyl)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-6-yl)(1-methyl-1H-indazol-5-yl)carbamate (250 mg, 0.461 mmol) in EtOH (3.0 mL) and water (10 mL) was added Iron (257 mg, 4.61 mmol) and NH
4Cl (246 mg, 4.61 mmol) and the resulting mixture was allowed to stir for 16 h. The progress of the reaction was monitored by TLC and UPLC. After completion of the reaction, the reaction mixture was diluted with water (100 mL) and extracted with ethyl acetate (2 X30 mL). The combined organic layers was washed with brine, dried over anhydrous Na
2SO
4, filtered, and concentrated under reduced pressure to give the crude compound which was purified by column chromatography (silica gel mesh 100-200, at eluent of 50-80% ethyl acetate in hexane) to give tert-butyl (2-allyl-1-(3-aminophenyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-6-yl)(1-methyl-1H-indazol-5-yl)carbamate (0.150 g, 0.234 mmol, 50.8 % yield) as a brown solid compound. [0744] tert-butyl (2-allyl-1-(3-((1-methylpiperidin-4-yl)amino)phenyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-6-yl)(1-methyl-1H-indazol-5-yl)carbamate [0745] To a stirred solution of tert-butyl (2-allyl-1-(3-aminophenyl)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-6-yl)(1-methyl-1H-indazol-5-yl)carbamate(0.15 g, 0.293 mmol) and 1-methylpiperidin-4-one (0.033 g, 0.293 mmol) in Dichloroethane (5 mL) was added AcOH (1 mL) under inert atmosphere. The mixture was stirred for 4 h at room temperature
and then cooled to 0 °C. STAB (0.311 g, 0.293 mmol) was added and the mixture allowed to stir for 16 h. The progress of the reaction was monitored by TLC and UPLC. After completion of the reaction, the reaction mixture was diluted with water (100 mL) and extracted with ethyl acetate (2 X 100 mL). The combined organic layers was washed with brine (100 mL), dried over anhydrous sodium sulfate, filtered, and concentrated under reduced pressure to give the crude compound which was purified by flash column chromatography (silica mesh 100-200 at eluent of 0-20% MeOH and DCM) to give tert-butyl (2-allyl-1-(3-((1-methylpiperidin-4-yl)amino)phenyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-6-yl)(1-methyl-1H-indazol-5-yl)carbamate (140 mg, 0.204 mmol, 69.8 % yield) as a yellow solid compound. [0746] tert-butyl (2-allyl-1-(3-(methyl(1-methylpiperidin-4-yl)amino)phenyl)-3-oxo-2,3- dihydro-1H-pyrazolo[3,4-d]pyrimidin-6-yl)(1-methyl-1H-indazol-5-yl)carbamate [0747] To a stirred solution of tert-butyl (2-allyl-1-(3-((1-methylpiperidin-4- yl)amino)phenyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-6-yl)(1-methyl-1H- indazol-5-yl)carbamate (0.130 g, 0.213 mmol) in THF (2 mL) was added NaH (0.012 g, 0.533 mmol) and allowed to stir for 30 min at 0 °C under inert atmosphere. MeI (0.030 g, 0.213 mmol) was added and the mixture was allowed to stir for 16 h at room temperature. The progress of the reaction was monitored by TLC and UPLC. After completion of the reaction, the reaction mixture was diluted with water (100 mL) and extracted with DCM (2 X 100 mL). The combined organic layers was washed with brine (100 mL), dried over anhydrous sodium sulfate, filtered, and concentrated under reduced pressure to give the crude compound tert-butyl (2-allyl-1-(3-(methyl(1-methylpiperidin-4-yl)amino)phenyl)-3-oxo-2,3- dihydro-1H-pyrazolo[3,4-d]pyrimidin-6-yl)(1-methyl-1H-indazol-5-yl)carbamate (120 mg) as a yellow solid. The crude compound was taken as such for the next step without purification. [0748] 2-allyl-1-(3-(methyl(1-methylpiperidin-4-yl)amino)phenyl)-6-((1-methyl-1H-indazol- 5-yl)amino)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0749] To a stirred solution of tert-butyl (2-allyl-1-(3-(methyl(1-methylpiperidin-4-yl) amino) phenyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-6-yl)(1-methyl-1H-indazol- 5-yl)carbamate (90 mg, 0.144 mmol) in DCM (5 mL) was added 4M HCl in 1,4dioxane (0.3 mL, 1.200 mmol) and the mixture was stirred at room temperature for 16 h. The progress of the reaction was monitored by TLC and UPLC. After completion of the reaction, the reaction mixture was concentrated under reduced pressure to get the crude compound which was purified by prep-HPLC (Column: X-select CSH C18, Mobile Phase A: 0.1% Formic acid in
water, Mobile Phase B: acetonitrile, Flowrate:15.0mL/Min, Rt-10.8) to give 2-allyl-1-(3- (methyl(1-methylpiperidin-4-yl)amino)phenyl)-6-((1-methyl-1H-indazol-5-yl)amino)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (7.7 mg, 0.015 mmol, 10.09 % yield) as an off- white solid. [0750] Example 196. Synthesis of 2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(3-((1- methylpiperidin-4-yl)oxy)phenyl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 218) [0751] To a stirred solution of 2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(3-(piperidin- 4-yloxy)phenyl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (210 mg, 0.423 mmol) in THF (5 mL) was added 37% aq. formaldehyde (172 mg, 2.114 mmol) at 25 °C, and the mixture was stirred for 10 min, then STAB (269 mg, 1.269 mmol) was added portion wise. After the complete addition of STAB, the reaction mixture was stirred at 25 °C for 16 h. The progress of the reaction was monitored by UPLC. After completion of the reaction, the reaction mixture was quenched with TFA, followed by Ammonia in MeOH. The reaction mixture was diluted with water and extracted with 10% MeOH in DCM. The combined organic extracts were washed with aq. sodium bicarbonate, dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to afford crude compound which was purified by Prep-HPLC (FA method) to give 2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1- (3-((1-methylpiperidin-4-yl)oxy)phenyl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (21.22 mg, 0.040 mmol, 9.53 % yield) as a white solid. [0752] Example 197. Synthesis of 2-allyl-6-((4-(2-fluoroethoxy)phenyl)amino)-1-(6- (piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 233) and 2-allyl-6-((4-(2-fluoroethoxy)phenyl)amino)-1-(6-((1- methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 234) [0753] 1-(2-fluoroethoxy)-4-nitrobenzene [0754] To a stirred solution of 4-nitrophenol (1.5 g, 10.78 mmol) in DMF (10 ml) was added K
2CO
3 (4.47 g, 32.3 mmol) followed by the addition of 1-fluoro-2-iodoethane (2, 1.876 g, 10.78 mmol) at 0 °C under inert atmosphere. The mixture was stirred at rt for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, water (20 mL) was added and the resulting solid was filtered and washed with n-hexane to get the pure compound 1-(2-fluoroethoxy)-4-nitrobenzene (3, 1.5 g, 8.10 mmol, 75 % yield) as a white solid. [0755] 4-(2-fluoroethoxy)aniline
[0756] To a stirred solution of 1-(2-fluoroethoxy)-4-nitrobenzene (1 g, 5.40 mmol) in MeOH (10 ml) was added 10% Pd/C (0.575 g, 0.540 mmol) at rt under inert atmosphere. The mixture was stirred under H
2 bladder pressure for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mass was filtered through celite and washed with MeOH (2 X 100 mL). The combined organic layers was collected and solvents evaporated under reduced pressure to give 4-(2- fluoroethoxy)aniline (850 mg, 4.82 mmol, 89 % yield) as a brown colored solid. [0757] tert-butyl 4-((6-(2-allyl-6-((4-(2-fluoroethoxy)phenyl)amino)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [0758] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (1 g, 1.885 mmol) in AcOH (12 ml) was added 4-(2-fluoroethoxy)aniline (0.439 g, 2.83 mmol) at rt under inert atmosphere. The mixture was stirred at rt for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the solvent was evaporated under reduced pressure and the residue was quenched with aq. NaHCO3 (50 mL) and then extracted with EA (2 X 100 mL). The combined organic layers were dried over anhydrous Na
2SO
4, evaporated under reduced pressure to give the crude compound which was purified by column chromatography (SiO2/230-400 mesh; ~50-80% EtOAc/n-hexane) to give tert-butyl 4-((6-(2-allyl-6-((4-(2-fluoroethoxy)phenyl)amino)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (500 mg, 0.793 mmol, 42.1 % yield) as an off-white solid. [0759] 2-allyl-6-((4-(2-fluoroethoxy)phenyl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)- 1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0760] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-((4-(2-fluoroethoxy)phenyl)amino)- 3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1- carboxylate (500 mg, 0.826 mmol) in 1,4-dioxane (4 ml) was added 4M HCl in dioxane (1 ml, 4.00 mmol) at 0 °C under inert atmosphere, and the mixture was then stirred at rt for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the solvent was evaporated under reduced pressure. The residue was washed with n- hexane to get the compound 2-allyl-6-((4-(2-fluoroethoxy)phenyl)amino)-1-(6-(piperidin-4- yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (400 mg, 0.792 mmol, 95.84 % yield) as an off-white solid. Fifty mg of the above compound was taken and purified by prep HPLC (Column: X-select CSH C18, Mobile Phase A: Ammonium acetate in water, Mobile Phase B: acetonitrile, Flowrate:15.0mL/Min, Rt-10.8) to get the pure compound.
[0761] 2-allyl-6-((4-(2-fluoroethoxy)phenyl)amino)-1-(6-((1-methylpiperidin-4- yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0762] To a stirred solution of 2-allyl-6-((4-(2-fluoroethoxy)phenyl)amino)-1-(6-(piperidin- 4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (400 mg, 0.791 mmol) in THF (5 ml) was added 37% formaldehyde (0.4 mL, 3.96 mmol) followed by the addition of STAB (503 mg, 2.374 mmol) portion wise. The reaction mixture was stirred at 25 °C for 1 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was quenched with NH
3 in MeOH followed by TFA at rt and extracted with 10% MeOH in DCM (2 X 100 mL). The combined organic layers were dried over anhydrous Na
2SO
4. The solvent was evaporated under reduced pressure to give the crude compound which was purified by prep HPLC (Column: X-select CSH C18, Mobile Phase A: Ammonium acetate in water, Mobile Phase B: acetonitrile, Flowrate:15.0mL/Min, Rt-10.8) to give 2-allyl-6-((4-(2-fluoroethoxy)phenyl)amino)-1-(6-((1-methylpiperidin-4- yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (143 mg, 0.271 mmol, 34.3 % yield) as white solid. [0763] Example 198. Synthesis of 2-ethyl-6-((1-methyl-1H-benzo[d]imidazol-5- yl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (Compound 235) [0764] 2-Ethyl-1-(6-fluoropyridin-2-yl)-6-(methylthio)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one [0765] A stirred solution of 2-ethyl-6-(methylthio)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (1 g, 4.76 mmol), 2-bromo-6-fluoropyridine (0.837 g, 4.76 mmol), trans- N,N -Dimethylethylenediamine (0.397 g, 4.50 mmol) and potassium carbonate (1.972 g, 14.27 mmol) in 1,4-dioxane (4 ml), was degassed for 5 min, then copper (I) iodide (0.904 g, 4.76 mmol) was added at 25 °C and the resulting mixture was stirred at 100 °C for 2 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was filtered on celite pad and washed with ethyl acetate (250 mL). The filtrate was evaporated under reduced pressure. The resulting crude material was purified by flash chromatography (SiO2/100-200 mesh; 20-30% Ethyl acetate-hexane) to afford 2-ethyl-1-(6- fluoropyridin-2-yl)-6-(methylthio)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (1 g, 3.28 mmol, 68.9 % yield) as a pale brown solid. [0766] 2-Ethyl-1-(6-fluoropyridin-2-yl)-6-(methylsulfonyl)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one [0767] To a stirred solution of 2-ethyl-1-(6-fluoropyridin-2-yl)-6-(methylthio)-1,2-dihydro-
3H-pyrazolo[3,4-d]pyrimidin-3-one (700 mg, 2.293 mmol) in dichloromethane (30 ml) was added mCPBA (1187 mg, 4.81 mmol) at 0 °C and the resulting mixture stirred at 25 °C for 2 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was diluted with DCM (300 mL) and washed with sodium bicarbonate solution (2 X 150 mL). The combined organic layer was dried over Na2SO4, filtered and concentrated under reduced pressure to afford the crude 2-ethyl-1-(6-fluoropyridin-2-yl)-6- (methylsulfonyl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (600 mg, 1.138 mmol, 49.7 % yield) as pale yellow solid. [0768] 2-ethyl-1-(6-fluoropyridin-2-yl)-6-((1-methyl-1H-benzo[d]imidazol-5-yl)amino)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0769] To a stirred solution of 2-ethyl-1-(6-fluoropyridin-2-yl)-6-(methylsulfonyl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (650 mg, 1.927 mmol) in acetic acid (5 mL) was added 1-methyl-1H-benzo[d]imidazol-5-amine (312 mg, 2.120 mmol) at room temperature. The resulting reaction mixture was stirred at rt for 16 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was concentrated under reduced pressure. The residue was basified with sodium bicarbonate and extracted with ethyl acetate (10 mL x 2). The combined organic layer was dried over Na
2SO
4, filtered, and concentrated under reduced pressure to afford crude material that was purified by flash chromatography (SiO
2/100-200 mesh; 10-15% methanol- DCM) to afford 2-ethyl-1-(6- fluoropyridin-2-yl)-6-((1-methyl-1H-benzo[d]imidazol-5-yl)amino)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one (550 mg, 1.238 mmol, 64.2 % yield) as an off-white solid. [0770] 2-ethyl-6-((1-methyl-1H-benzo[d]imidazol-5-yl)amino)-1-(6-((1-methylpiperidin-4- yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0771] NaH (60% in oil) (90.6 mg, 2.078 mmol) was added to a stirred solution of 1- methylpiperidin-4-ol (170 mg, 0.720 mmol) in Tetrahydrofuran (5 ml) at RT and the mixture was then stirred at 60 °C for 1 h.2-ethyl-1-(6-fluoropyridin-2-yl)-6-((1-methyl-1H- benzo[d]imidazol-5-yl)amino)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (400 mg, 0.990 mmol) was added and the mixture stirred at 60 °C for 16 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was diluted with ice water (150 mL) and extracted with 10% methanol-DCM (2 X 100 mL). The combined organic layer was dried over Na2SO4, filtered, and concentrated under reduced pressure. The resulting crude material was purified by prep. HPLC (Shimpak C
18(
250 X 19mm), Mobile phase A: 10MM ABC in H
2O, Mobile phase B: acetonitrile) to give 2-ethyl- 6-((1-methyl-1H-benzo[d]imidazol-5-yl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-
yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (75 mg, 0.149 mmol, 30.1 % yield) as an off white solid. [0772] Example 199. Synthesis of 2-allyl-6-((1-methyl-1H-indol-5-yl)amino)-1-(6- (piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 236) [0773] tert-butyl 4-((6-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [0774] To a solution of tert-butyl 4-((6-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (2.7 g, 5.42 mmol) in DCM (30 ml), mCPBA (1.869 g, 10.83 mmol) was added portion wise in reaction mixture at 0 °C. The reaction mixture was stirred at rt for 2 h. The reaction progress was monitored by TLC. The reaction mixture was quenched with 10% sodium bicarbonate solution in water (50 mL) and extracted with DCM (250 mL). The organic layer was washed with brine water (250 ml ), and dried over Na2SO4, filtered, and concentrated under reduced pressure to give tert-butyl 4-((6-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin- 1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (2.5 g, 3.58 mmol, 66.1 % yield) as a yellow gum. The crude compound was taken as such for the next step without further purification. [0775] tert-butyl 4-((6-(2-allyl-6-((1-methyl-1H-indol-5-yl)amino)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [0776] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (500 mg, 0.942 mmol) in acetic acid (10 ml), 1-methyl-1H-indol-5-amine (138 mg, 0.942 mmol) was added in the reaction mixture and stirred at RT for 6 h. The progress of the reaction was monitored by TLC. The reaction mixture was concentrated under vacuum to afford crude compound. The crude product was purified by flash column chromatography (silica-gel, mesh size 60- 120) using ethyl acetate-hexane (55 to 60%) as an eluent to obtain tert-butyl 4-((6-(2-allyl-6- ((1-methyl-1H-indol-5-yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1- yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (600 mg, 0.674 mmol) as an brown solid. [0777] 2-allyl-6-((1-methyl-1H-indol-5-yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0778] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-((1-methyl-1H-indol-5-yl)amino)-3- oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1- carboxylate (400 mg, 0.670 mmol) in DCM (10 ml), methane sulfonic acid (322 mg, 3.35 mmol) was added in the reaction mixture and stirred at RT for 6 h. The progress of the
reaction was monitored by TLC. After completion of the reaction, the reaction mixture was concentrated under vacuum to afford crude compound. The crude compound was neutralized by aqueous sodium bicarbonate solution (50 ml) and extracted with 10% methanol-DCM. Organic layers were dried over sodium sulfate and concentrated under vacuum to afford crude compound. The crude compound was purified by prep-HPLC (Ammonium acetate method). Pure fractions were collected and lyophilized to give 2-allyl-6-((1-methyl-1H-indol- 5-yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin- 3-one (23 mg, 0.045 mmol, 6.74 % yield) as an off white solid. [0779] Example 200. Synthesis of 2-allyl-6-((6-methylpyridin-3-yl)amino)-1-(6- (piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 237) [0780] tert-butyl 4-((6-(2-allyl-6-((6-methylpyridin-3-yl)amino)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [0781] A stirred mixture of tert-butyl 4-((6-(2-allyl-6-amino-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (300 mg, 0.642 mmol) and potassium carbonate (310 mg, 2.246 mmol) in dioxane (8 ml) was degassed for 20 min at rt under inert atmosphere, then was added 5-bromo-2-methylpyridine (143 mg, 0.834 mmol) and stirred at 100 °C for 16 h. The progress of the reaction was monitored by UPLC; after completion of the reaction, the reaction mixture was diluted with DCM and filtered through celite pad. The collected filtrate was concentrated under reduced pressure. The crude was purified by flash column chromatography (silica gel, 100-200 mesh size) using ethyl acetate- pet ether (30% - 40%) eluent to obtain tert-butyl 4-((6-(2-allyl-6-((6-methylpyridin- 3-yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2- yl)oxy)piperidine-1-carboxylate (350 mg, 0.601 mmol, 94 % yield) as an off white solid. [0782] 2-allyl-6-((6-methylpyridin-3-yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0783] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-((6-methylpyridin-3-yl)amino)-3- oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1- carboxylate (150 mg, 0.269 mmol) in 1,4-dioxane (5 mL), was added 4M HCl in 1,4-dioxane (2.0 mL) at 0 °C. The resulting reaction mixture was stirred at room temperature for 4 h. The reaction was monitored by TLC. After completion of the reaction, the reaction mixture was concentrated under reduced pressure. The resultant crude residue was purified by prep. HPLC X-Select C18 (19*250, 5mL), Mobile phase A: 10 MM AA in H
2O, Mobile phase B: acetonitrile) to give 2-allyl-6-((6-methylpyridin-3-yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-
2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (33 mg, 0.072 mmol, 26.8 % yield) as an off white-solid. [0784] Example 201. Synthesis of 6-((1H-indazol-5-yl)amino)-2-allyl-1-(6-((1- methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 238) [0785] 2-allyl-1-(6-fluoropyridin-2-yl)-6-(methylsulfonyl)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one [0786] To a stirred solution of 2-allyl-1-(6-fluoropyridin-2-yl)-6-(methylthio)-1,2-dihydro- 3H-pyrazolo[3,4-d]pyrimidin-3-one (1 g, 3.15 mmol) in DCM (10 ml) was added m-CPBA (1.679 g, 6.62 mmol) at 0 °C under inert atmosphere. The resulting reaction mixture was stirred at room temperature for 2 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was quenched with sodium bicarbonate and extracted with DCM to give crude 2-allyl-1-(6-fluoropyridin-2-yl)-6- (methylsulfonyl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (1 g, 2.86 mmol, 91% yield). This crude compound was taken for the next step without any further purification. [0787] 6-((1H-indazol-5-yl)amino)-2-allyl-1-(6-fluoropyridin-2-yl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one [0788] To a stirred solution of 2-allyl-1-(6-fluoropyridin-2-yl)-6-(methylsulfonyl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (1 g, 2.86 mmol) in AcOH (5 ml) was added 1H-indazol-5-amine (0.572 g, 4.29 mmol) at room temperature under inert atmosphere. The resultant reaction mixture was stirred at 25 °C for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was diluted with water and extracted with 10% MeOH in DCM (2 X 50 mL). The combined organic layers were dried over Na2SO4, filtered, and concentrated under reduced pressure to give crude compound which was purified by column chromatography (SiO
2/230-400 mesh; 5-20% MeOH-DCM) to give 6-((1H-indazol-5-yl)amino)-2-allyl-1-(6-fluoropyridin-2-yl)- 1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (600 mg, 1.491 mmol, 52.1 % yield) as a brown gummy solid. [0789] tert-butyl 5-((2-allyl-1-(6-fluoropyridin-2-yl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-6-yl)amino)-1H-indazole-1-carboxylate [0790] To a stirred solution of 6-((1H-indazol-5-yl)amino)-2-allyl-1-(6-fluoropyridin-2-yl)- 1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (400 mg, 0.994 mmol) in DCM (10 ml) was added TEA (0.693 ml, 4.97 mmol) followed by the addition of DMAP (24.29 mg, 0.199 mmol) and Boc-anhydride (0.277 ml, 1.193 mmol) at room temperature under inert
atmosphere. Then, the resultant reaction mixture was stirred at 25 °C for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, water was added (40 mL) to the reaction mixture and it was extracted with EtOAc (2 X 100 mL). The organic layer was concentrated under reduced pressure to give crude compound which was purified by flash column chromatography (SiO2/230-400 mesh; 50-100% ethyl acetate- pet ether) to give tert-butyl 5-((2-allyl-1-(6-fluoropyridin-2-yl)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-6-yl)amino)-1H-indazole-1-carboxylate (400 mg, 0.796 mmol, 80 % yield) as an off-white solid. [0791] tert-butyl 5-((2-allyl-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)-3-oxo-2,3- dihydro-1H-pyrazolo[3,4-d]pyrimidin-6-yl)amino)-1H-indazole-1-carboxylate [0792] To a stirred solution of 1-methylpiperidin-4-ol (241 mg, 2.090 mmol) in THF (2 ml) was added NaH (84 mg, 2.090 mmol) at 0 °C and the mixture was stirred at 60 °C for 1 h. Then was added tert-butyl 5-((2-allyl-1-(6-fluoropyridin-2-yl)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-6-yl)amino)-1H-indazole-1-carboxylate (350 mg, 0.697 mmol) and the reaction mixture was stirred at room temperature for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was quenched with ice-cold water, and the solid formed was filtered and dried under vacuum to give tert-butyl 5-((2-allyl-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)-3-oxo-2,3- dihydro-1H-pyrazolo[3,4-d]pyrimidin-6-yl)amino)-1H-indazole-1-carboxylate (350 mg, 0.586 mmol, 84 % yield) as an off-white solid. This compound, as such, was taken for the next step without any further purification. [0793] 6-((1H-indazol-5-yl)amino)-2-allyl-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)- 1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0794] To a stirred solution of tert-butyl 5-((2-allyl-1-(6-((1-methylpiperidin-4- yl)oxy)pyridin-2-yl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-6-yl)amino)-1H- indazole-1-carboxylate (350 mg, 0.586 mmol) in DCM (15 ml) was added 4M HCl in dioxane (3 ml, 12 mmol) at 0 °C under inert atmosphere. The resulting reaction mixture was stirred at room temperature for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was concentrated under reduced pressure. The resultant crude residue was washed with n-hexane to give crude compound which was purified by Prep HPLC (X Select C18, 19 X 250, Mobile phase A: 0.1% AA in H
2O, Mobile phase B: acetonitrile) to give 6-((1H-indazol-5-yl)amino)-2-allyl- 1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3- one (77 mg, 0.128 mmol, 26% yield) as an off-white solid.
[0795] Example 202. Synthesis of 2-allyl-1-[6-(4-piperidyloxy)-2-pyridyl]-6-(7- quinolylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 243) [0796] This compound was made using a similar method as described in the synthesis of 2- allyl-6-(2-methoxy-4-pyridylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro- 3H-1,2,5,7-tetraazainden-3-one. Yield 50 mg. [0797] Example 203. Synthesis of 2-allyl-6-((4-fluorophenyl)amino)-1-(2-((1- methylpiperidin-4-yl)oxy)pyrimidin-4-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3- one (Compound 348) and 2-allyl-6-((4-fluorophenyl)amino)-1-(2-((piperidin-4- yl)oxy)pyrimidin-4-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 247) [0798] tert-butyl 4-((4-(2-allyl-6-((4-fluorophenyl)amino)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyrimidin-2-yl)oxy)piperidine-1-carboxylate [0799] To a stirred solution of tert-butyl 4-((4-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyrimidin-2-yl)oxy)piperidine-1-carboxylate (200 mg, 0.376 mmol) in acetic acid (2 ml) was added 4-fluoroaniline (62.7 mg, 0.564 mmol) at rt under inert atmosphere. The mixture was then stirred at rt for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the solvent was evaporated under reduced pressure. To the residue was added aq. NaHCO3 (10 mL), at which a appeared solid was filtered and washed with MTBE and n-hexane to give tert-butyl 4-((4- (2-allyl-6-((4-fluorophenyl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1- yl)pyrimidin-2-yl)oxy)piperidine-1-carboxylate (160 mg, 0.270 mmol, 71.8 % yield) as an off-white solid. [0800] 2-allyl-6-((4-fluorophenyl)amino)-1-(2-(piperidin-4-yloxy)pyrimidin-4-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0801] To a stirred solution of tert-butyl 4-((4-(2-allyl-6-((4-fluorophenyl)amino)-3-oxo-2,3- dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyrimidin-2-yl)oxy)piperidine-1-carboxylate (300 mg, 0.533 mmol) in dioxane (3 ml) was added 4M HCl in dioxane (2 ml, 8.00 mmol) at 0 °C under inert atmosphere. The mixture was stirred at rt for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the solvent was evaporated under reduced pressure. A solid was collected. This solid was washed with n- hexane to give 2-allyl-6-((4-fluorophenyl)amino)-1-(2-(piperidin-4-yloxy)pyrimidin-4-yl)- 1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (240 mg, 0.498 mmol, 93 % yield) as an off- white solid. 40 mg of the above compound was taken and purified by prep HPLC (Column: X-select CSH C18, Mobile Phase A: Ammonium acetate in water, Mobile Phase B:
acetonitrile, Flowrate:15.0mL/Min, Rt-10.8) to give the pure compound (6.98 mg). [0802] 2-allyl-6-((4-fluorophenyl)amino)-1-(2-((1-methylpiperidin-4-yl)oxy)pyrimidin-4-yl)- 1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0803] To a stirred solution of 2-allyl-6-((4-fluorophenyl)amino)-1-(2-(piperidin-4- yloxy)pyrimidin-4-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (300 mg, 0.649 mmol) in THF (4 ml) was added 37% formaldehyde (0.240 ml, 1.946 mmol) followed by the addition of STAB (687 mg, 3.24 mmol). The mixture was stirred at rt for 1 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was quenched with NH3 in MeOH followed by TFA at rt and extracted with 10% MeOH in DCM (2 X 100 mL). The combined organic layers was dried over anhydrous Na2SO4. The solvent was evaporated under reduced pressure to give the crude compound which was purified by prep HPLC (X Select C18, 19 X 250, Mobile phase A: 10 mm Ammonium bicarbonate in water in H
2O, Mobile phase B: acetonitrile) to give 2-allyl-6-((4- fluorophenyl)amino)-1-(2-((1-methylpiperidin-4-yl)oxy)pyrimidin-4-yl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one (26 mg, 0.054 mmol, 8.4 % yield) as a white solid. [0804] Example 204. Synthesis of 2-allyl-1-(2-(piperidin-4-yloxy)pyrimidin-4-yl)-6-((4- (2,2,2-trifluoroethoxy)phenyl)amino)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 252) and 2-allyl-1-(2-((1-methylpiperidin-4-yl)oxy)pyrimidin-4-yl)-6-((4- (2,2,2-trifluoroethoxy)phenyl)amino)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 253) [0805] 4-iodo-2-(methylthio)pyrimidine [0806] To the solution of 4-chloro-2-(methylthio)pyrimidine (1 g, 6.23 mmol) in a vial, was added hydriodic acid (10 ml, 73.1 mmol) at 0 °C and stirred at rt for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the solid was filtered, and the collected solid was dissolved in water quenched with aq. NaHCO
3 (2 X 50 ml) and extracted with EA (2 X 100 mL). The collected organic layer was washed with aq. sodium thiosulfate (100 mL), and the solvent was evaporated under reduced pressure to get the pure compound 4-iodo-2-(methylthio)pyrimidine (800 mg, 3.01 mmol, 48.4 % yield) as a gummy colorless solid. [0807] 4-iodo-2-(methylsulfonyl)pyrimidine [0808] To a stirred solution of 4-iodo-2-(methylthio)pyrimidine (1 g, 3.97 mmol) in DCM (10 ml) was added mCPBA (1.369 g, 7.93 mmol) at rt under an inert atmosphere. The mixture was stirred at rt for 2 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, was added aq. NaHCO
3 (50 mL) and the mixture
was extracted with EA (2 X 100 mL). The combined organic layers was dried over anhydrous Na2SO4. The solvent was evaporated under reduced pressure to give the crude 4-iodo-2- (methylsulfonyl)pyrimidine (3, 1.1 g, 1.700 mmol, 42.9 % yield) as an off-white solid. This compound was taken as such for the next step without any further purification. [0809] tert-butyl 4-((4-iodopyrimidin-2-yl)oxy)piperidine-1-carboxylate [0810] To a stirred solution of tert-butyl 4-hydroxypiperidine-1-carboxylate (800 mg, 3.97 mmol) in THF (10 ml) at 0 °C under inert atmosphere was added NaH (477 mg, 11.92 mmol), followed by the addition of 4-iodo-2-(methylsulfonyl)pyrimidine (1.129 g, 3.97 mmol), which was dissolved in THF (5 mL). The mixture was stirred at rt for 20 min. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction was quenched with ice-cold water (50 mL) at 0 °C and extracted with EA (2 X 100 mL). The combined organic layers were dried over anhydrous Na2SO4. The solvent was evaporated under reduced pressure to give the crude compound which was purified by column chromatography (SiO2/230-400 mesh; 20-40% EA-n-hexane) to give tert-butyl 4-((4- iodopyrimidin-2-yl)oxy)piperidine-1-carboxylate (300 mg, 0.600 mmol, 15.09 % yield) as an off-white solid. [0811] tert-butyl 4-((4-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-1-yl)pyrimidin-2-yl)oxy)piperidine-1-carboxylate [0812] To a stirred solution of 2-allyl-6-(methylthio)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (2.5 g, 11.25 mmol) in dioxane (5 ml) was added tert-butyl 4-((4- iodopyrimidin-2-yl)oxy)piperidine-1-carboxylate (4.56 g, 11.25 mmol) followed by the addition of K2CO3 (4.66 g, 33.7 mmol) and N,N'-dimethyl ethylene diamine (0.990 g, 11.25 mmol). The mixture was degassed for 30 min, then was added copper(I) iodide (2.142 g, 11.25 mmol) and again the mixture was degassed for 5 min and then stirred at 100 °C for 2 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mass was filtered through celite and washed with EA (2 X 20 mL). The combined filtrate was dried over anhydrous Na2SO4. The solvent was evaporated under reduced pressure to give the crude compound which was purified by column chromatography (SiO2/230-400 mesh; 55-70% EA-n-hexane) to give tert-butyl 4-((4-(2-allyl-6-(methylthio)- 3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyrimidin-2-yl)oxy)piperidine-1- carboxylate (700 mg, 1.149 mmol, 10.21% yield) as an off-white solid. [0813] tert-butyl 4-((4-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-1-yl)pyrimidin-2-yl)oxy)piperidine-1-carboxylate [0814] To a stirred solution of tert-butyl 4-((4-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H-
pyrazolo[3,4-d]pyrimidin-1-yl)pyrimidin-2-yl)oxy)piperidine-1-carboxylate (450 mg, 0.901 mmol) in DCM (10 ml) was added mCPBA (311 mg, 1.801 mmol) and the mixture was stirred at rt for 2 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, aq. NaHCO
3 solution was added and the mixture was extracted with EA (2 X 100 mL). The combined organic layers was dried over anhydrous Na2SO4. The solvents were evaporated under reduced pressure to give the crude compound tert-butyl 4-((4- (2-allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyrimidin- 2-yl)oxy)piperidine-1-carboxylate (400 mg, 0.241 mmol, 26.7 % yield). This crude compound, as such, is taken for the next step without any purification. [0815] tert-butyl 4-((4-(2-allyl-3-oxo-6-((4-(2,2,2-trifluoroethoxy)phenyl)amino)-2,3- dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyrimidin-2-yl)oxy)piperidine-1-carboxylate [0816] To a stirred solution of tert-butyl 4-((4-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyrimidin-2-yl)oxy)piperidine-1-carboxylate (400 mg, 0.752 mmol) in acetic acid (2 ml) was added 4-(2,2,2-trifluoroethoxy)aniline (216 mg, 1.129 mmol) at rt under inert atmosphere. The mixture was stirred for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the solvent was evaporated under reduced pressure, ice was added and the resulting mixture slowly quenched with aq. NaHCO3 (10 mL). A solid appeared that was filtered and dried under vacuum. The collected solid was washed with MTBE (4 mL) and n-hexane (10 mL) to give tert-butyl 4- ((4-(2-allyl-3-oxo-6-((4-(2,2,2-trifluoroethoxy)phenyl)amino)-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-1-yl)pyrimidin-2-yl)oxy)piperidine-1-carboxylate (400 mg, 0.548 mmol, 72.8 % yield) as an off-white solid. [0817] 2-allyl-1-(2-(piperidin-4-yloxy)pyrimidin-4-yl)-6-((4-(2,2,2-trifluoroethoxy)- phenyl)amino)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0818] To a stirred solution of tert-butyl 4-((4-(2-allyl-3-oxo-6-((4-(2,2,2- trifluoroethoxy)phenyl)amino)-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyrimidin-2- yl)oxy)piperidine-1-carboxylate (450 mg, 0.700 mmol) in dioxane (3 ml) was added 4M HCl in dioxane (2 mL, 8.00 mmol) at 0 °C under inert atmosphere. The mixture was stirred at rt for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the solvent was evaporated under reduced pressure, and it appeared a solid that was collected. This solid was washed with n-hexane to give 2-allyl-1-(2-(piperidin-4- yloxy)pyrimidin-4-yl)-6-((4-(2,2,2-trifluoroethoxy)phenyl)amino)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one (360 mg, 0.66 mmol, 94.7 % yield) as an off-white solid. 60 mg of the above compound was taken and purified by prep HPLC (Column: X-select CSH
C18, Mobile Phase A: Ammonium acetate in water, Mobile Phase B: acetonitrile, Flowrate:15.0mL/Min, Rt-10.8) to get the pure compound (31.2 mg). [0819] 2-allyl-1-(2-((1-methylpiperidin-4-yl)oxy)pyrimidin-4-yl)-6-((4-(2,2,2- trifluoroethoxy)phenyl)amino)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0820] To a stirred solution of 2-allyl-1-(2-(piperidin-4-yloxy)pyrimidin-4-yl)-6-((4-(2,2,2- trifluoroethoxy)phenyl)amino)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (250 mg, 0.461 mmol) in THF (4 ml) was added formaldehyde (2.88 ml, 2.304 mmol) followed by the addition of STAB (293 mg, 1.382 mmol) and the mixture was stirred at rt for 1 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was quenched with NH
3 in MeOH followed by TFA at rt and extracted with 10% MeOH in DCM (2 X 100 mL). The combined organic layers was dried over anhydrous Na2SO4. The solvent was evaporated under reduced pressure to give the crude compound which was purified by prep HPLC (X Select C18, 19 X 250, Mobile phase A: 10 mm Ammonium bicarbonate in water in H
2O, Mobile phase B: acetonitrile) to give 2-allyl-1- (2-((1-methylpiperidin-4-yl)oxy)pyrimidin-4-yl)-6-((4-(2,2,2-trifluoroethoxy)phenyl)amino)- 1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (43 mg, 0.076 mmol, 16.56 % yield) as a white solid. [0821] Example 205. Synthesis of 2-allyl-6-((4-ethoxyphenyl)amino)-1-(6-(piperidin-4- yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 254) and 2-allyl-6-((4-ethoxyphenyl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)- 1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one(Compound 255) [0822] 1-ethoxy-4-nitrobenzene [0823] To a stirred solution of 4-nitrophenol (1, 1.5 g, 10.78 mmol) in DMF (10 ml) was added bromoethane (2, 0.959 ml, 12.94 mmol) and K2CO3 (4.47 g, 32.3 mmol) and the mixture was stirred at 100 °C for 2 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the mixture was with water (250 mL) and extracted with ethyl acetate (2 X 250 mL). The combined organic extracts were washed with brine (100 mL), dried over anhydrous Na
2SO
4, filtered and concentrated under reduced pressure to afford 1-ethoxy-4-nitrobenzene (1.7 g, 10.07 mmol, 93 % yield) as an off-white solid. [0824] 4-ethoxyaniline [0825] To a stirred solution of 1-ethoxy-4-nitrobenzene (1.5 g, 8.97 mmol) in ethanol (20 ml) was added Pd/C (0.955 g, 8.97 mmol) and the mixture was stirred at rt for 16 h under a hydrogen bladder atmosphere. The progress of the reaction was monitored by TLC and
LCMS. After completion of the reaction, the reaction mixture was filtered through celite. The collected filtrate was concentrated under reduced pressure to afford crude compound 4- ethoxyaniline (1.2 g, 7.96 mmol, 89 % yield) as a brown liquid compound. [0826] tert-butyl 4-((6-(2-allyl-6-((4-ethoxyphenyl)amino)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [0827] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (1.0 g, 1.885 mmol) in AcOH (10 ml) was added 4-ethoxyaniline (0.310 g, 2.262 mmol) and the mixture was stirred at rt for 16 h. The progress of the reaction was monitored by TLC and LCMS. The reaction mixture was diluted with water (250 mL) and extracted with ethyl acetate (250 mL X 2). The combined organic extracts was washed with brine (100 mL), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to afford crude compound which was purified column chromatography (SiO2/230-400 mesh; 50-70% ethyl acetate in n- hexane) to give tert-butyl 4-((6-(2-allyl-6-((4-ethoxyphenyl)amino)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (500 mg, 0.817 mmol, 43.3 % yield) as an off-white solid. [0828] 2-allyl-6-((4-ethoxyphenyl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro- 3H-pyrazolo[3,4-d]pyrimidin-3-one [0829] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-((4-ethoxyphenyl)amino)-3-oxo-2,3- dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (500 mg, 0.851 mmol) in 1,4-dioxane (30 ml) was added 4M HCl in 1,4-dioxane (1 mL, 4.25 mmol) and the resulting mixture was stirred at rt for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the solvent was evaporated under reduced pressure; the residue obtained was washed with n-hexane, filtered and concentrated under reduced pressure to afford crude 2-allyl-6-((4-ethoxyphenyl)amino)-1-(6- (piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (450 mg, 0.785 mmol, 92 % yield) as a yellow solid. 50 mg of the above compound was taken and purified by prep HPLC (Column: X-select CSH C18, Mobile Phase A: Ammonium acetate in water, Mobile Phase B: acetonitrile, Flowrate:15.0mL/Min, Rt-10.8) to give the pure compound (26.49 mg). [0830] 2-allyl-6-((4-ethoxyphenyl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)- 1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0831] To the stirred solution of 2-allyl-6-((4-ethoxyphenyl)amino)-1-(6-(piperidin-4- yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (450mg, 0.923 mmol) in
THF (10 ml), was added formaldehyde (0.5 ml, 13.57 mmol). The mixture was stirred at rt for 1 h and then was added STAB (105 mg, 2.77 mmol) and the resulting mixture was allowed to stir for 1 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, reaction mixture was quenched with TFA, followed by methanolic NH3 and water. The mixture was extracted with 10% MeOH in DCM (2 X 100 mL). The combined organic layers was dried over anhydrous Na
2SO
4, filtered and concentrated under reduced pressure to afford crude compound which was purified by prep HPLC to give 2-allyl-6-((4-ethoxyphenyl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin- 2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (150 mg, 0.293 mmol, 31.8% yield) as an off-white solid. [0832] Example 206. Synthesis of 2-allyl-6-((4-isobutoxyphenyl)amino)-1-(6-(piperidin- 4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 256) and 2-allyl-6-((4-isobutoxyphenyl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2- yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 257) [0833] 1-isobutoxy-4-nitrobenzene [0834] To a stirred solution of 4-nitrophenol (1 g, 7.19 mmol) in DMF (10 ml) was added potassium carbonate (2.98 g, 21.57 mmol) and 1-bromo-2-methylpropane (0.782 ml, 7.19 mmol) at room temperature under inert atmosphere. Then, the resulting reaction mixture was stirred at 90 °C for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was quenched with water and extracted with DCM to give crude compound, which was purified by column chromatography (SiO2/100-200 mesh; 40-50% ethyl acetate-hexane) to give 1-isobutoxy-4-nitrobenzene (700 mg, 2.87 mmol, 39.9 % yield) as an off-white solid. [0835] 4-isobutoxyaniline [0836] To a degassed solution of 1-isobutoxy-4-nitrobenzene (800 mg, 4.10 mmol) in methanol (20 ml) was added 10% Pd-C (436 mg, 4.10 mmol) under nitrogen atmosphere. The reaction mixture was stirred under a hydrogen atmosphere using hydrogen bladder pressure at room temperature for 16 h. The progress of the reaction was monitored by TLC and UPLC. After completion of the reaction, the reaction mixture was filtered under a nitrogen atmosphere through a pad of celite to remove the catalyst; the celite pad was washed with methanol (100 mL), and the filtrate was concentrated under reduced pressure to give 4- isobutoxyaniline (700 mg, 3.39 mmol, 83 % yield) as a black gummy solid. This compound, as such, is taken for the next step without further purification. [0837] tert-butyl 4-((6-(2-allyl-6-((4-isobutoxyphenyl)amino)-3-oxo-2,3-dihydro-1H-
pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [0838] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (800 mg, 1.508 mmol) in acetic acid (5 ml) was added 4-isobutoxyaniline (498 mg, 3.02 mmol) at room temperature. The resulting reaction mixture was stirred at 25 °C for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was diluted with water and extracted with 10% MeOH-DCM (2 X 50 mL). The combined organic layers was dried over Na
2SO
4, filtered, and concentrated under reduced pressure to give crude tert-butyl 4-((6-(2-allyl-6-((4-isobutoxyphenyl)amino)-3-oxo-2,3- dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (800 mg, 1.299 mmol, 86 % yield) as a brown gummy solid. [0839] 2-allyl-6-((4-isobutoxyphenyl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0840] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-((4-isobutoxyphenyl)amino)-3-oxo- 2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (100 mg, 0.162 mmol) in DCM (2 ml) was added 4M HCl in dioxane (3 ml, 12 mmol) at 0 °C and under inert atmosphere. The resulting reaction mixture was stirred at room temperature for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was concentrated under reduced pressure. The crude residue was washed with sodium bicarbonate and extracted with DCM to give crude compound, which was purified by Prep HPLC (X Select C18, 19 X 250, Mobile phase A: 0.1% FA in H
2O, Mobile phase B: acetonitrile) to give 2-allyl-6-((4-isobutoxyphenyl)amino)-1-(6- (piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (10 mg, 0.019 mmol, 11.94 % yield) as an off-white solid. [0841] 2-allyl-6-((4-isobutoxyphenyl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)- 1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0842] To a stirred solution of 2-allyl-6-((4-isobutoxyphenyl)amino)-1-(6-(piperidin-4- yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (200 mg, 0.388 mmol) in THF (5 ml) were added formaldehyde (31.5 mg, 0.388 mmol) and STAB (247 mg, 1.164 mmol) at 0 °C. The resulting reaction mixture was stirred at room temperature for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was concentrated under reduced pressure. The crude residue was washed with water and extracted with 10% MeOH in DCM. The organic layer was dried over anhydrous Na
2SO
4, and evaporated under reduced pressure to give the crude compound. The
crude was purified by prep HPLC(X Select C18, 19 X 250, Mobile phase A: 0.1% FA in H
2O, Mobile phase B: acetonitrile) to give 2-allyl-6-((4-isobutoxyphenyl)amino)-1-(6-((1- methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (95 mg, 0.179 mmol, 46.2 % yield) as an off-white solid. [0843] Example 207. Synthesis of 2-allyl-6-((4-(cyclopropylmethoxy)phenyl)amino)-1-(6- (piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 259) and 2-allyl-6-((4-(cyclopropylmethoxy)phenyl)amino)-1-(6-((1- methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 258) [0844] 1-(cyclopropylmethoxy)-4-nitrobenzene [0845] To a stirred solution of 4-nitrophenol (1.5 g, 10.78 mmol) in DMF (10 ml) were added K2CO3 (4.47 g, 32.3 mmol) and (bromomethyl)cyclopropane (1.046 ml, 10.78 mmol) at 0 °C under inert atmosphere. The mixture was stirred at 90°C for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, ice-cold water was added and the mixture stirred for another 10 minutes. The solid was filtered, washed with n-hexane, and dried under vacuum to give 1-(cyclopropylmethoxy)-4-nitrobenzene (1.2 g, 6.21 mmol, 57.6 % yield) as a yellow solid. [0846] 4-(cyclopropylmethoxy)aniline [0847] To a stirred solution of 1-(cyclopropylmethoxy)-4-nitrobenzene (1 g, 5.18 mmol) in ethanol (10 ml) was added 10% Pd/C (0.551 g, 5.18 mmol) at 25 °C under inert atmosphere, and allowed to stir under H
2 bladder pressure at rt for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was filtered through celite and washed with ethyl acetate (2 X 100 mL). The filtrate was concentrated under reduced pressure to give 4-(cyclopropylmethoxy)aniline (750 mg, 4.60 mmol, 89 % yield) as a brown gummy solid. [0848] tert-butyl 4-((6-(2-allyl-6-((4-(cyclopropylmethoxy)phenyl)amino)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [0849] To a mixture of tert-butyl 4-((6-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (1 g, 1.885 mmol) in AcOH (15 ml) was added 4-(cyclopropylmethoxy)aniline (0.369 g, 2.262 mmol) at rt under nitrogen atmosphere. The reaction mixture was stirred for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was concentrated under reduced pressure, water was added (100 mL). The resulting mixture wasextracted with 10% MeOH in DCM (2 X 100 mL). The combined organic layers
was washed with 10% aq. NaHCO
3, dried over anhydrous Na
2SO
4 solvent, and evaporated under reduced pressure to give crude compound which was purified by column chromatography (silica mesh 100-200 using eluent of 70-80% ethyl acetate and hexane) to give tert-butyl 4-((6-(2-allyl-6-((4-(cyclopropylmethoxy)phenyl)amino)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (460 mg, 0.750 mmol, 39.8 % yield). [0850] 2-allyl-6-((4-(cyclopropylmethoxy)phenyl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2- yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0851] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-((4-(cyclopropylmethoxy)phenyl) amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1- carboxylate (450 mg, 0.734 mmol) in 1,4-dioxane (3 ml) was added 4M HCl in dioxane (0.326 ml, 1.304 mmol) at 0 °C under inert atmosphere. The resulting reaction mixture was stirred at room temperature for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the solvent was evaporated under reduced pressure and a solid appeared that was collected and washed with n-hexane to give 2-allyl-6-((4- (cyclopropylmethoxy)phenyl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one (320 mg, 0.623 mmol, 84.8 % yield) as off-white solid. 140 mg of the above compound was taken and purified by Prep HPLC (Column: X-select CSH C18, Mobile phase A: Water (with 0.1% AA), Mobile phase B: acetonitrile, Flow rate-15.0 mL/Min, Rt-12.8) to give the pure compound (101.71 mg). [0852] 2-allyl-6-((4-(cyclopropylmethoxy)phenyl)amino)-1-(6-((1-methylpiperidin-4- yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0853] To a stirred solution of 2-allyl-6-((4-(cyclopropylmethoxy)phenyl)amino)-1-(6- (piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (270 mg, 0.526 mmol) in THF (10 mL) was added 37% formaldehyde (0.3 mL, 2.63 mmol), followed by the addition of STAB (334 mg, 1.577 mmol) at rt. The mixture was stirred for 1 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was quenched with NH
3 in MeOH followed by TFA at rt and water. The mixture was extracted with 10% MeOH in DCM (2 X 100 mL). The combined organic layers was dried over anhydrous Na
2SO
4. The solvent was evaporated under reduced pressure to give the crude compound that was purified by prep HPLC (Column: X-select CSH C18, Mobile phase A: Water (with 0.1% AA), Mobile phase B: acetonitrile, Flow rate-15.0 mL/Min, Rt-12.8) to give 2-allyl-6-((4-(cyclopropylmethoxy)phenyl)amino)-1-(6-((1- methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (68
mg, 0.128 mmol, 24.27 % yield) as white solid. [0854] Example 208. Synthesis of 2-allyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-6-[p- (1,4-thiazinan-4-yl)phenylamino]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 261) [0855] This compound was made using a similar method as described in the synthesis of 2- allyl-6-((6-methylpyridin-3-yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one using 4-(p-bromophenyl)-1,4-thiazinane (46.9 mg, 182 µmol) and tert-butyl 4-[6-(2-allyl-6-amino-3-oxo-1,2-dihydro-3H-1,2,5,7-tetraazainden-1-yl)- 2-pyridyloxy]-1-piperidinecarboxylate (85 mg). Yield 20 mg. [0856] Example 209. Synthesis of 2-allyl-6-(4-morpholino-3-toluidino)-1-[6-(4- piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 262) [0857] This compound was made using a similar method as described in the synthesis of 2- allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using tert-butyl 4-{6-[2-allyl-6-(methylthio)-3- oxo-1,2-dihydro-3H-1,2,5,7-tetraazainden-1-yl]-2-pyridyloxy}-1-piperidinecarboxylate (0.20 g) and 4-morpholino-3-tolylamine (92.5 mg). Yield 180 mg. [0858] Example 210. Synthesis of rel-(S)-2-allyl-1-(6-(azepan-4-yloxy)pyridin-2-yl)-6- ((4-fluorophenyl)amino)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 266), rel-(S)-2-allyl-6-((4-fluorophenyl)amino)-1-(6-((1-methylazepan-4-yl)oxy)pyridin- 2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 351), rel-(R)-2-allyl- 1-(6-(azepan-4-yloxy)pyridin-2-yl)-6-((4-fluorophenyl)amino)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one (Compound 344), and rel-(R)-2-allyl-6-((4- fluorophenyl)amino)-1-(6-((1-methylazepan-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one (Compound 372) [0859] tert-butyl4-((6-bromopyridin-2-yl)oxy)azepane-1-carboxylate [0860] To a stirred solution of 2-bromo-6-fluoropyridine (1.5 g, 8.52 mmol) in THF (30 ml) was added NaH (0.686 g, 17.90 mmol) followed by the addition of tert-butyl 4- hydroxyazepane-1-carboxylate (1.835 g, 8.52 mmol) at 0 °C under inert atmosphere and the mixture was allowed to stir at 60 °C for 2 h. The progress of the reaction was monitored by TLC and UPLC. After completion of the reaction, the reaction mixture was quenched with ice-cold water (50 mL) and extracted with ethyl acetate (2 X 100 mL), dried over anhydrous sodium sulfate, filtered, and concentrated under reduced pressure to give the crude compound, which was purified by column chromatography (silica mesh 100-200 at eluent of 40-50% ethyl acetate and hexane) to give tert-butyl 4-((6-bromopyridin-2-yl)oxy)azepane-1-
carboxylate (2.0 g, 5.33 mmol, 62.6 % yield) as an off-white solid. [0861] tert-butyl 4-((6-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-1-yl)pyridin-2-yl)oxy)azepane-1-carboxylate [0862] To a stirred solution of tert-butyl 4-((6-bromopyridin-2-yl)oxy)azepane-1-carboxylate (5.01 g, 13.50 mmol) in 1,4-dioxane (15 ml) was added 2-allyl-6-(methylthio)-1,2-dihydro- 3H-pyrazolo[3,4-d]pyrimidin-3-one (2.5 g, 11.25 mmol), N,N-Dimethylethylenediamine (0.992 g, 11.25 mmol) and K2CO3 (4.66 g, 33.7 mmol). The mixture was degassed for 20 min at rt under inert atmosphere, then was added CuI (2.137 g, 11.25 mmol) and again the mixture was degassed for 5 min. The mixture was stirred at 100 °C for 5 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was filtered through celite and the filtrate concentrated under reduced pressure to afford crude compound, which was purified by column chromatography (silica mesh 100-200 at eluent of 40-50% ethyl acetate and hexane) to afford tert-butyl 4-((6-(2-allyl-6- (methylthio)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)azepane- 1-carboxylate (1.9 g, 3.08 mmol, 27.4 % yield) as a gummy solid. [0863] tert-butyl 4-((6-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-1-yl)pyridin-2-yl)oxy)azepane-1-carboxylate [0864] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)azepane-1-carboxylate (2.0 g, 3.90 mmol), in DCM (20 ml) was added mCPBA (1.885 g, 8.19 mmol) at 0 °C under inert atmosphere, and the resulting mixture was allowed to stir at rt for 3 h. The progress of the reaction was monitored by TLC and UPLC. After completion of the reaction, the reaction mixture was quenched with aq. NaHCO
3 (100 mL) and extracted with DCM (2 X 200 mL). The combined organic layers was washed with brine (100 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to give the crude compound tert-butyl 4-((6-(2-allyl- 6-(methylsulfonyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2- yl)oxy)azepane-1-carboxylate (1.8 g, 1.124 mmol, 28.8 % yield). This crude compound was taken for the next step without any further purification. [0865] tert-butyl 4-((6-(2-allyl-6-((4-fluorophenyl)amino)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)azepane-1-carboxylate [0866] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)azepane-1-carboxylate (1.7 g, 3.12 mmol) in acetic acid (15ml) was added 4-fluoro aniline (0.296 ml, 3.12 mmol) and the resulting mixture was allowed to stir at rt for 16h. The progress of the reaction was monitored
by TLC and UPLC. After completion of the reaction, the solvent was evaporated under reduced pressure and the residue quenched with aq. NaHCO
3 (100 mL) and extracted with 10% MeOH in DCM (2 X 200 mL). The combined organic extracts was washed with brine (100 mL), dried over anhydrous sodium sulfate, filtered, and concentrated under reduced pressure to afford crude compound which was purified by column chromatography (silica mesh 100-200 at eluent of 40-50% ethyl acetate and hexane) to give tert-butyl 4-((6-(2-allyl- 6-((4-fluorophenyl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2- yl)oxy)azepane-1-carboxylate (1.0 g, 1.650 mmol, 52.9 % yield) as an off-white solid. This pure compound was separated by chiral SFC (I-CELLULOSE-Z, 0.5% IPAm in ACN-IPA- 60-40, Oven Temperature: 40, Column Position: 4, BPR Pressure: 102.0 kg/cm2) to get the two enantiomers. [0867] rel-(R)-2-allyl-1-(6-(azepan-4-yloxy)pyridin-2-yl)-6-((4-fluorophenyl)amino)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0868] To a stirred solution of rel-tert-butyl (R)-4-((6-(2-allyl-6-((4-fluorophenyl)amino)-3- oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)azepane-1-carboxylate (the first eluting enantiomer, 230 mg, 0.4 mmol) in DCM (5 ml) was added 4M HCl in dioxane (0.1 ml, 0.052 mmol) at 0 °C under inert atmosphere. The mixture was stirred at rt for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the solvent was evaporated under reduced pressure to give rel-(R)-2-allyl-1-(6- (azepan-4-yloxy)pyridin-2-yl)-6-((4-fluorophenyl)amino)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (180 mg, 0.40 mmol, 94 % yield) as an off-white solid. 40 mg of the above compound was taken and purified by prep HPLC (Column: X-select CSH C18, Mobile Phase A: Ammonium acetate in water, Mobile Phase B: acetonitrile, Flowrate:15.0mL/Min, Rt-10.8) to get the pure compound (20 mg). Chiral HPLC: 97.381 %, tR = 4.72 min. [0869] rel-(R)-2-allyl-6-((4-fluorophenyl)amino)-1-(6-((1-methylazepan-4-yl)oxy)pyridin-2- yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0870] To a stirred solution of rel-(R)-2-allyl-1-(6-(azepan-4-yloxy)pyridin-2-yl)-6-((4- fluorophenyl)amino)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (55 mg, 0.116 mmol) in THF (4 ml) was added 37% formaldehyde (0.1 ml, 0.578 mmol) followed by the addition of STAB (73.5 mg, 0.347 mmol) and the resulting mixture was stirred at rt for 1 h. Progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was quenched with NH
3 in MeOH, followed by TFA at rt, and extracted with 10% MeOH in DCM (2 X 50 mL). The combined organic layers were dried over anhydrous Na
2SO
4. The solvent was evaporated under reduced pressure to give the crude
compound, which was purified by prep HPLC (X Select C18, 19 X 250, Mobile phase A: 10 mm Ammonium bicarbonate in water in H
2O, Mobile phase B: acetonitrile) to give rel-(R)-2- allyl-6-((4-fluorophenyl)amino)-1-(6-((1-methylazepan-4-yl)oxy)pyridin-2-yl)-1,2-dihydro- 3H-pyrazolo[3,4-d]pyrimidin-3-one (19.52 mg, 0.040 mmol, 34.5 % yield) as an off-white solid. Chiral HPLC: 99.145 %, tR = 4.97 min. [0871] rel-(S)-2-allyl-1-(6-(azepan-4-yloxy)pyridin-2-yl)-6-((4-fluorophenyl)amino)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0872] To a stirred solution of rel-tert-butyl (S)-4-((6-(2-allyl-6-((4-fluorophenyl)amino)-3- oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)azepane-1-carboxylate (the second eluting enantiomer, 30 mg, 0.052 mmol) in DCM (2 ml) was added 4M HCl in 1,4-dioxane (0.1 ml, 0.052 mmol) at 0 °C under inert atmosphere and the resulting mixture was stirred for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the solvent was evaporated under reduced pressure and washed with n-hexane to give the compound rel-(S)-2-allyl-1-(6-(azepan-4-yloxy)pyridin-2-yl)-6-((4- fluorophenyl)amino)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (17 mg, 0.035 mmol, 67.9 % yield) as an off-white solid. Chiral HPLC: 97.381 %, tR = 4.72 min. [0873] rel-(S)-2-allyl-6-((4-fluorophenyl)amino)-1-(6-((1-methylazepan-4-yl)oxy)pyridin-2- yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0874] To a stirred solution of rel-(S)-2-allyl-1-(6-(azepan-4-yloxy)pyridin-2-yl)-6-((4- fluorophenyl)amino)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (300 mg, 0.631 mmol) in THF (4 ml) was added 37% formaldehyde (1 ml, 0.631 mmol) followed by the addition of STAB (401 mg, 1.893 mmol) and the resulting mixture was stirred at rt for 1 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was quenched with NH3 in MeOH followed by TFA at rt and extracted with 10% MeOH in DCM (2 X 100 mL). The combined organic layers were dried over anhydrous Na2SO4. The solvent was evaporated under reduced pressure to give the crude compound, which was purified by prep HPLC (X Select C18, 19 X 250, Mobile phase A: 10 mm Ammonium bicarbonate in water in H
2O, Mobile phase B: acetonitrile) to give rel-(S)-2- allyl-6-((4-fluorophenyl)amino)-1-(6-((1-methylazepan-4-yl)oxy)pyridin-2-yl)-1,2-dihydro- 3H-pyrazolo[3,4-d]pyrimidin-3-one (19.52 mg, 0.040 mmol, 34.5 % yield) as an off-white solid. Chiral SFC purity: 96.326 %, tR = 5.43 min. [0875] Example 211. Synthesis of 2-allyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-6-(4- morpholino-3-toluidino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 270) [0876] This compound was made using a similar method as described in the synthesis of 2-
allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using 2-allyl-6-(4-morpholino-3-toluidino)-1-[6- (4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one. [0877] Example 212. Synthesis of 2-allyl-6-((2-methyl-2H-indazol-5-yl)amino)-1-(6- (piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 274) and 2-allyl-6-((2-methyl-2H-indazol-5-yl)amino)-1-(6-((1- methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 273) [0878] tert-butyl 4-((6-(2-allyl-6-((2-methyl-2H-indazol-5-yl)amino)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [0879] To a stirred solution tert-butyl 4-((6-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (950 mg, 1.790 mmol) in acetonitrile (5 mL) was added 2-methyl-2H-indazol-5-amine (290 mg, 1.969 mmol) at room temperature. The resultant reaction mixture was subjected to stirring at 70 °C for 16 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was diluted with water and extracted with 10% methanol-DCM (50 mL x 2). The combined organic layer was dried over Na
2SO
4, filtered, and concentrated under reduced pressure. The crude was purified by flash column chromatography (silica gel, 100-200 mesh size) using methanol-DCM (15-20%) as an eluent to obtain tert-butyl 4-((6-(2-allyl-6-((2- methyl-2H-indazol-5-yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1- yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (550 mg, 0.782 mmol, 43.7 % yield) as a brown solid. [0880] 2-allyl-6-((2-methyl-2H-indazol-5-yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)- 1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0881] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-((2-methyl-2H-indazol-5-yl)amino)- 3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1- carboxylate (550 mg, 0.920 mmol) in 1,4-dioxane (5 mL), was added 4M HCl in 1,4-dioxane (2.0 mL) at 0 °C. The reaction mixture was stirred at room temperature for 4 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was concentrated under reduced pressure. The resultant crude residue was purified by prep. HPLC X-Select C18 (19*250, 5mL), Mobile phase A: 0.1 M FA in H
2O, Mobile phase B: acetonitrile) to give 2-allyl-6-((2-methyl-2H-indazol-5-yl)amino)-1-(6-(piperidin-4- yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (55 mg, 0.109 mmol, 11.89 % yield) as an off white-solid.
[0882] 2-allyl-6-((2-methyl-2H-indazol-5-yl)amino)-1-(6-((1-methylpiperidin-4- yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0883] To a stirred solution of 2-allyl-6-((2-methyl-2H-indazol-5-yl)amino)-1-(6-(piperidin- 4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (450 mg, 0.904 mmol) in THF (10 mL) was added 37 % formaldehyde (5 mL) at 25 °C. The reaction mixture was stirred at 25 °C for 5 min. STAB (575 mg, 2.71 mmol) was added portion-wise. After the complete addition of STAB, the reaction mixture was stirred at 25 °C for 20 min. The progress of the reaction was monitored by TLC and LCMS. The reaction mixture was quenched with TFA, followed by methanolic ammonia 2 molar solution diluted with water and extracted with 10% MeOH in DCM (2 X 100 mL). The combined organic extracts was washed with NaHCO3, dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure to afford crude compound, which was purified by prep. HPLC ZORBAX (30 MM), Mobile phase A: 10 MM ABC in H
2O, Mobile phase B: acetonitrile) to give 2- allyl-6-((2-methyl-2H-indazol-5-yl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)- 1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (185 mg, 0.347 mmol, 38.4 % yield)as an off-white solid. [0884] Example 213. Synthesis of 2-allyl-6-((3-chloro-1H-indazol-5-yl)amino)-1-(6- (piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 275) [0885] tert-butyl 4-((6-(2-allyl-6-((3-chloro-1H-indazol-5-yl)amino)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [0886] To a stirred solution tert-butyl 4-((6-(2-allyl-6-(methylsulfinyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (600 mg, 1.166 mmol) in acetonitrile (5 mL), 3-chloro-1H-indazol-5-amine (215 mg, 1.283 mmol) was added at room temperature. The resulting reaction mixture was subjected to stirring at 75 °C for 16 h. The progress of reaction was monitored by TLC. After completion of the reaction, the reaction mixture was diluted with water and extracted with 10% methanol-DCM (50 mL x 2). The combined organic layer was dried over Na
2SO
4, filtered, and concentrated under reduced pressure. The above crude was purified by flash column chromatography (silica gel, 100-200 mesh size) using ethylacetate-hexane (40 % to 50%) as an eluent to obtain tert-butyl 4-((6-(2- allyl-6-((3-chloro-1H-indazol-5-yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin- 1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (400 mg, 0.563 mmol, 48.3 % yield) as a brown solid. [0887] 2-allyl-6-((3-chloro-1H-indazol-5-yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-
1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0888] To a stirred solution tert-butyl 4-((6-(2-allyl-6-((3-chloro-1H-indazol-5-yl)amino)-3- oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1- carboxylate (400 mg, 0.647 mmol) in 1,4-dioxane (5 mL), was added HCl in 1,4-dioxane (4M, 2.0 mL) at 0 °C. The resulting reaction mixture was stirred at room temperature for 4 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was concentrated under reduced pressure. The resultant crude residue was purified by prep. HPLC X-Select C18 (19*250, 5mL), Mobile phase A: 0.1 FA in H
2O, Mobile phase B: acetonitrile) to give 2-allyl-6-((3-chloro-1H-indazol-5-yl)amino)-1-(6- (piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (92 mg, 0.177 mmol, 68% yield) as an off white-solid. [0889] Example 214. Synthesis of Tert-butyl 4-((6-(2-allyl-6-((2-ethyl-2H-indazol-5- yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2- yl)oxy)piperidine-1-carboxylate (Compound 276) and 2-allyl-6-((2-ethyl-2H-indazol-5- yl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (Compound 282) [0890] tert-butyl 4-((6-(2-allyl-6-((2-ethyl-2H-indazol-5-yl)amino)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [0891] To a stirred solution tert-butyl 4-((6-(2-allyl-6-(methylsulfinyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (1 g, 1.943 mmol) in acetonitrile (15 mL) was added 2-ethyl-2H-indazol-5-amine (0.470 g, 2.91 mmol) at room temperature. The reaction mixture was stirred at 70 °C for 16 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was diluted with water and extracted with 10% methanol-DCM (50 mL x 2). The combined organic layer was dried over Na
2SO
4, filtered, and concentrated under reduced pressure. The above crude was purified by flash column chromatography (silica gel, 100-200 mesh size) using ethylacetate-hexane (40 % to 50%) as an eluent to obtain the desired product tert-butyl 4-((6-(2-allyl-6-((2-ethyl-2H-indazol-5-yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (1.2 g, 1.373 mmol, 70.7 % yield) as a brown solid. [0892] 2-allyl-6-((2-ethyl-2H-indazol-5-yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0893] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-((2-ethyl-2H-indazol-5-yl)amino)-3- oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-
carboxylate (150 mg, 0.172 in 1,4-dioxane (5 mL), was added 4M HCl in 1,4-dioxane (2.0 mL) at 0 °C. The resulting reaction mixture was stirred at room temperature for 4 h. The reaction was monitored by TLC. After completion of the reaction, the reaction mixture was concentrated under reduced pressure. The resultant crude residue was purified by prep. HPLC (Shimpack 150*195um;, Mobile phase A: 10 MM ABC in H
2O, Mobile phase B: acetonitrile) to give 2-allyl-6-((2-ethyl-2H-indazol-5-yl)amino)-1-(6-(piperidin-4- yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (43.4 mg, 0.083 mmol, 48.4 % yield) as an off white-solid. [0894] 2-allyl-6-((2-ethyl-2H-indazol-5-yl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin- 2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0895] To a stirred solution of 2-allyl-6-((2-ethyl-2H-indazol-5-yl)amino)-1-(6-(piperidin-4- yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (1 g, 1.955 mmol) in THF (10 mL) was added formaldehyde (0.437 ml, 5.86 mmol) at 25 °C. The reaction mixture was stirred at 25 °C for 5 min. Then, STAB (0.829 g, 3.91 mmol) was added portion-wise. After the complete addition of STAB, the reaction mixture was stirred at 25 °C for 20 minutes. The progress of the reaction was monitored by TLC and LCMS. The reaction mixture was quenched with TFA followed by NH
3 in MeOH, diluted with water and extracted with 10% MeOH in DCM (2 X 100 mL). The above combined organic extracts were washed with NaHCO
3, dried over anhydrous Na
2SO
4, filtered, and concentrated under reduced pressure. The above crude was purified by prep. HPLC (X-select C18,250mm X 19, Mobile phase A: 0.1%FA in H
2O, Mobile phase B: acetonitrile), to afford 2-allyl-6-((2-ethyl- 2H-indazol-5-yl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one (162 mg, 0.302 mmol, 15.45 % yield) as an off-white solid. [0896] Example 215. Synthesis of 2-allyl-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2- yl)-6-((4-morpholinophenyl)amino)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 278) [0897] tert-butyl 4-((6-(2-allyl-6-((4-morpholinophenyl)amino)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [0898] To a stirred solution tert-butyl 4-((6-(2-allyl-6-(methylsulfinyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (500 mg, 0.972 mmol) in acetonitrile (10 mL) was added 4-morpholinoaniline (346 mg, 1.943 mmol) at room temperature. The reaction mixture was stirred at 70 °C for 16 h. The progress of reaction was monitored by LCMS, After the completion of the reaction, the reaction mixture was concentrated under reduced pressure to obtain crude product. The crude product was purified
by flash column chromatography (silica gel, 100-200) using ethyl acetate-hexane (50 to 100%) as an eluent to obtain tert-butyl 4-((6-(2-allyl-6-((4-morpholinophenyl)amino)-3-oxo- 2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (500 mg, 0.445 mmol, 45.8 % yield) as a red colored gum liquid. [0899] 2-allyl-6-((4-morpholinophenyl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0900] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-((4-morpholinophenyl)amino)-3- oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1- carboxylate (500 mg, 0.445 mmol) in 1,4-dioxane (10 mL), was added 4 N HCl in 1,4- dioxane (5.0 mL) at 0 °C. The resulting reaction mixture was stirred at room temperature for 4 h. The progress of reaction was monitored by TLC. After completion of the reaction, the reaction mixture was concentrated under reduced pressure. The resultant crude residue was purified by prep-HPLC X-SELECT C18 (19*150mm)5u, Mobile phase A: 0.1%FA in Water, Mobile phase B: acetonitrile) to give 2-allyl-6-((4-morpholinophenyl)amino)-1-(6-(piperidin- 4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (21.9 mg, 0.041 mmol, 9.22 % yield) as a white fluffy solid. [0901] 2-allyl-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)-6-((4- morpholinophenyl)amino)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0902] To a stirred solution of 2-allyl-6-((4-morpholinophenyl)amino)-1-(6-(piperidin-4- yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (1 g, 1.892 mmol) in THF (20 mL) was added 37 % aq. formaldehyde (5 mL) at 25 °C. The reaction mixture stirred at 25 °C for 5 min. sodium triacetoxyborohydride (1.203 g, 5.68 mmol) was added portion-wise. After the complete addition of STAB, the reaction mixture was stirred at 25 °C for 1 h. The progress of the reaction was monitored by TLC and LCMS. Then reaction mixture was quenched with TFA followed by NH3 in MeOH then diluted with water and extracted with 10% MeOH in DCM (2 X 100 mL). The combined organic extract was washed with NaHCO3, dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure to afford crude compound which was purified by prep. HPLC (X-SELECT C18150M, Mobile phase A: 10 MM ABC in H
2O, Mobile phase B: acetonitrile) to give 2- allyl-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)-6-((4-morpholinophenyl)amino)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (95 mg, 0.173 mmol, 17.42 % yield) as a white fluffy solid. [0903] Example 216. Synthesis of 2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(2- (piperidin-4-yloxy)pyrimidin-4-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one
(Compound 350) and 2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(2-((1- methylpiperidin-4-yl)oxy)pyrimidin-4-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3- one (Compound 279) [0904] tert-butyl 4-((4-(2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyrimidin-2-yl)oxy)piperidine-1-carboxylate [0905] To a stirred solution of tert-butyl 4-((4-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyrimidin-2-yl)oxy)piperidine-1-carboxylate (0.7 g, 1.317 mmol) in acetic acid (10 ml) was added 1-methyl-1H-indazol-5-amine (2, 0.194 g, 1.317 mmol) at 0°C. The resulting reaction mixture was stirred at room temperature for 16 h. The progress of reaction was monitored by TLC. After completion of the reaction, the reaction mixture was concentrated under reduced pressure. The resultant crude residue was washed with sodium bicarbonate and extracted with DCM to give crude compound. The crude compound was purified by column chromatography to give tert-butyl 4-((4-(2-allyl-6-((1- methyl-1H-indazol-5-yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1- yl)pyrimidin-2-yl)oxy)piperidine-1-carboxylate (300 mg, 0.436 mmol, 33.1 % yield) as off white solid. [0906] 2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(2-(piperidin-4-yloxy)pyrimidin-4-yl)- 1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0907] To a stirred solution of tert-butyl 4-((4-(2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)- 3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyrimidin-2-yl)oxy)piperidine-1- carboxylate (0.270 g, 0.451 mmol) in DCM (10 ml) was added 4 N HCl in 1,4-dioxane (0.1 ml, 0.451 mmol) at 0 °C. The resulting reaction mixture was stirred at room temperature for 16 h. The progress of reaction was monitored by LCMS. After completion of the reaction, the reaction mixture was concentrated under reduced pressure. The resultant crude residue was washed with sodium bicarbonate and extracted with DCM. The solvent was removed in vacuo. The crude compound was submitted to prep. HPLC (Column: X-select CSH C18, Mobile phase A: Water (with 0.1% AA), Mobile phase B: acetonitrile, Flow rate-15.0 mL/Min, Rt-12.8) to give 2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(2-(piperidin-4- yloxy)pyrimidin-4-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (11 mg, 0.022 mmol, 54.9 % yield) as off white solid. [0908] 2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(2-((1-methylpiperidin-4- yl)oxy)pyrimidin-4-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0909] To a stirred solution of 2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(2-(piperidin- 4-yloxy)pyrimidin-4-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (350 mg, 0.702
mmol) in THF (2 ml) was added 37 % formaldehyde (0.1 ml, 0.702 mmol) and the resulting mixture was stirred for 10 min and then was added sodium triacetoxyborohydride (149 mg, 0.702 mmol) at 0°C. The resulting reaction mixture was stirred at room temperature for 16 h. The progress of reaction was monitored by TLC. The mixture was concentrated under reduced pressure. To the crude residue was added water and the mixture was extracted with DCM. Removal of solvent under reduced pressure gave a crude compound. The crude product was purified by prep HPLC (Shimpack, C18 (20*250mm), 5 micron) Mobile phase A: 10 mm Ammonium bicarbonate in water, Mobile phase B: acetonitrile) to give 2-allyl-6- ((1-methyl-1H-indazol-5-yl)amino)-1-(2-((1-methylpiperidin-4-yl)oxy)pyrimidin-4-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (80 mg, 0.155 mmol, 22.10 % yield) as off white solid. [0910] Example 217. Synthesis of 2-allyl-6-((1-ethyl-1H-indazol-5-yl)amino)-1-(6- (piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 280) [0911] 1-ethyl-5-nitro-1H-indazole [0912] To a stirred solution of 5-nitro-1H-indazole (1.5 g, 9.19 mmol) in N,N- Dimethylformamide (15 ml) was added sodium hydride (60% in oil, 1.57 g, 10.11 mmol) at 25 °C and the mixture was stirred for 30 min. Then, ethyl iodide (0.817 ml, 10.11 mmol) was added to the reaction mixture under an argon atmosphere. The resulting reaction mixture was stirred at 25 °C for 16 h. The reaction was monitored by TLC. After completion of the reaction, the reaction mixture was poured into ice-cold water, and the precipitated solid was filtered and dried. The resulting crude material was purified by flash chromatography (SiO
2/230-400 mesh; ~20-30% EtOAc/hexane) to afford 1-ethyl-5-nitro-1H-indazole (1.1 g, 5.71 mmol, 62.1 % yield) as an off white solid. [0913] 1-ethyl-1H-indazol-5-amine [0914] To a degassed solution of 1-ethyl-5-nitro-1H-indazole (1.1 g, 5.75 mmol) in EtOH (20 ml) was added 10% Pd/C (400 mg) under an inert atmosphere. Then, the reaction mixture was stirred under a hydrogen atmosphere using hydrogen bladder pressure at room temperature for 16 h. The progress of the reaction was monitored by TLC and UPLC. After completion of the reaction, the reaction mixture was filtered under a nitrogen atmosphere through a pad of celite and washed with MeOH (2 X 100 mL). The filtrate was concentrated under reduced pressure to get 1-ethyl-1H-indazol-5-amine (3, 0.91 g, 4.97 mmol, 86 % yield) as a brown gummy solid, which was taken into the next step without further purification. [0915] tert-butyl 4-((6-(2-allyl-6-((1-ethyl-1H-indazol-5-yl)amino)-3-oxo-2,3-dihydro-1H-
pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [0916] To a stirred solution tert-butyl 4-((6-(2-allyl-6-(methylsulfinyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (300 mg, 0.583 mmol) in acetonitrile (5 ml) was added 1-ethyl-1H-indazol-5-amine (122 mg, 0.758 mmol) at room temperature. The resulting reaction mixture was subjected to stirring at 70 °C for 16 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was diluted with water and extracted with 10% methanol-DCM (50 mL x 2). The combined organic layer was dried over Na
2SO
4, filtered, and concentrated under reduced pressure. The crude material was purified by flash column chromatography (silica gel, 100- 200 mesh size) using EtOH-hexane (60-80%) as an eluent to obtain tert-butyl 4-((6-(2-allyl- 6-((1-ethyl-1H-indazol-5-yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1- yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (350 mg, 0.244 mmol, 41.9 % yield) as a brown solid. [0917] 2-allyl-6-((1-ethyl-1H-indazol-5-yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0918] To a stirred solution tert-butyl 4-((6-(2-allyl-6-((1-ethyl-1H-indazol-5-yl)amino)-3- oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1- carboxylate (350 mg, 0.572 mmol) in DCM (10 ml), was added TFA (0.220 ml, 2.86 mmol) at 0 °C. The resulting reaction mixture was stirred at room temperature for 12 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was concentrated under reduced pressure. The crude residue was purified by prep. HPLC X- Select C18 (19*250, 5mL), Mobile phase A: 0.1 M FA in H
2O, Mobile phase B: acetonitrile) to give 2-allyl-6-((1-ethyl-1H-indazol-5-yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (49 mg, 0.095 mmol, 16.55 % yield) as an off white-solid. [0919] Example 218. Synthesis of 2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(6-((1- (methyl-d3)piperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin- 3-one (Compound 281) [0920] To a stirred solution 2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(6-(piperidin-4- yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (400 mg, 0.804 mmol) in THF (10 mL) was added formaldehyde D2O (20%, 2 ml, 0.804 mmol) at 25 °C. The reaction mixture was stirred at 25 °C for 5 min. Then, sodium borodeuteride (33.7 mg, 0.804 mmol) was added portion-wise, and the reaction mixture was stirred at 25 °C for 20 min. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction,
the reaction mixture was quenched with sodium hydroxide solution (20 mL) diluted with water and extracted with 10% MeOH in DCM (2 X 100 mL). The combined organic extracts were washed with NaHCO3, dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The residue was purified by prep. HPLC (X-select C18,250mm X 19, Mobile phase A: 10 MM AA in H
2O, Mobile phase B: acetonitrile), factions were lyophilized to give 2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(6-((1-(methyl-d3)piperidin-4- yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (62 mg, 0.120 mmol, 14.94 % yield) as an off-white solid. [0921] Example 219. Synthesis of 2‐ethyl‐6‐[(1‐methyl‐1H‐indazol‐5‐yl)amino]‐1‐{6‐ [(piperidin‐4‐yl)amino]pyridin‐2‐yl}‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one (Compound 285) [0922] This compound was made using a similar method as described in the synthesis of 2- allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using tert‐butyl 4‐({6‐[2‐ethyl‐6‐ (methylsulfanyl)‐3‐oxo‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐2‐ yl}amino)piperidine‐1‐carboxylate (190 mg) and 1‐methyl‐1H‐indazol‐5‐amine (1 equiv.). Yield: 136 mg TFA salt (58%) as a powder. [0923] Example 220. Synthesis of 2‐ethyl‐6‐[(1‐methyl‐1H‐indazol‐5‐yl)amino]‐1‐{6‐[(1‐ methylpiperidin‐4‐yl)amino]pyridin‐2‐yl}‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one (Compound 288) [0924] This compound was made using a similar method as described in the synthesis of 2- allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using 2‐ethyl‐6‐[(1‐methyl‐1H‐indazol‐5‐ yl)amino]‐1‐{6‐[(piperidin‐4‐yl)amino]pyridin‐2‐yl}‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐ one; trifluoroacetic acid (39 mg). Yield: 24 mg TFA salt (60%) as a powder. [0925] Example 221. Synthesis of 2-allyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-6-[p- (2,2,2-trifluoroethoxy)phenylamino]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 291) [0926] This compound was made using a similar method as described in the synthesis of 2- allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using 2-allyl-1-[6-(4-piperidyloxy)-2-pyridyl]-6- [p-(2,2,2-trifluoroethoxy)phenylamino]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (200 mg), Yield 100 mg. [0927] Example 222. Synthesis of 1‐{6‐[(1‐methylpiperidin‐4‐yl)oxy]pyridin‐2‐yl}‐6‐[(5‐
methylpyridin‐3‐yl)amino]‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐ one (Compound 292) [0928] tert‐butyl 4‐[(6‐{6‐[(5‐methylpyridin‐3‐yl)amino]‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐ 1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl}pyridin‐2‐yl)oxy]piperidine‐1‐carboxylate [0929] This compound was made using a similar method as described in the synthesis of 2- allyl-6-(2-methoxy-4-pyridylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro- 3H-1,2,5,7-tetraazainden-3-one using tert‐butyl 4‐({6‐[6‐amino‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐ 1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐2‐yl}oxy)piperidine‐1‐carboxylate (100 mg) and 3‐bromo‐5‐methylpyridine (1.5 equiv.). Yield: 85 mg, purity 60% (43%). [0930] 6‐[(5‐methylpyridin‐3‐yl)amino]‐1‐[6‐(piperidin‐4‐yloxy)pyridin‐2‐yl]‐2‐(prop‐2‐en‐ 1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one [0931] Trifluoroacetic acid was added to a stirred solution of tert‐butyl 4‐[(6‐{6‐[(5‐ methylpyridin‐3‐yl)amino]‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐ yl}pyridin‐2‐yl)oxy]piperidine‐1‐carboxylate (81 mg, 60% purity) in dry dichloromethane at room temperature. The resulting solution was stirred until LCMS indicated full conversion. The reaction mixture was concentrated and purified using reversed phase chromatography. The pure fractions were pooled and lyophilized to give the crude intermediate. Yield: 63 mg, 60% purity (95%). [0932] 1‐{6‐[(1‐methylpiperidin‐4‐yl)oxy]pyridin‐2‐yl}‐6‐[(5‐methylpyridin‐3‐yl)amino]‐2‐ (prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one [0933] This material was methylated using a method similar as that described for 2-allyl-6- ((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one using 6‐[(5‐methylpyridin‐3‐yl)amino]‐1‐[6‐(piperidin‐4‐ yloxy)pyridin‐2‐yl]‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one (63 mg, 60% purity). Yield: 18.3 mg (45%) as a powder. [0934] Example 223. Synthesis of 6‐[(1‐methyl‐1H‐pyrazol‐4‐yl)amino]‐1‐(6‐ {[(1S,4S,5S)‐2‐methyl‐2‐azabicyclo[2.2.2]octan‐5‐yl]oxy}pyridin‐2‐yl)‐2‐(prop‐2‐en‐1‐ yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one (Compound 294) [0935] This compound was made using a similar method as described in the synthesis of 2- allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using 1‐{6‐[(1S,4S,5S)‐2‐ azabicyclo[2.2.2]octan‐5‐yloxy]pyridin‐2‐yl}‐6‐[(1‐methyl‐1H‐pyrazol‐4‐yl)amino]‐2‐(prop‐ 2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one (107 mg, crude). Yield: 13.3 mg TFA salt (10%) as a powder.
[0936] Example 224. Synthesis of 6‐[(1‐methyl‐1H‐pyrazol‐4‐yl)amino]‐1‐(6‐ {[(1S,4S,5R)‐2‐methyl‐2‐azabicyclo[2.2.2]octan‐5‐yl]oxy}pyridin‐2‐yl)‐2‐(prop‐2‐en‐1‐ yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one (Compound 295) [0937] This compound was made using a similar method as described in the synthesis of 2- allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4-yl)amino)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using 1‐{6‐[(1S,4S,5R)‐2‐ azabicyclo[2.2.2]octan‐5‐yloxy]pyridin‐2‐yl}‐6‐[(1‐methyl‐1H‐pyrazol‐4‐yl)amino]‐2‐(prop‐ 2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one (105 mg). Yield: 20.5 mg (19%) as a powder. [0938] Example 225. Synthesis of 2-allyl-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-6-(m- tolylamino)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 296) [0939] tert-butyl 4-((6-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [0940] To a solution of tert-butyl 4-((6-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (1 g, 2.006 mmol) in 20 ml DCM, mCPBA (0.692 g, 4.01 mmol) was added at 0 °C. The reaction was stirred at rt for 2 h. The progress of the reaction was monitored by TLC, after completion of the reaction, the reaction mixture was quenched with 10% bicarbonate solution in water (50 mL) and extracted with DCM (250 mL). The organic layer was washed with water (250 ml ), brine solution (250 ml) and dried over Na2SO4, filtered and concentrated under reduced pressure to give tert-butyl 4-((6-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (1, 1.9 g). [0941] tert-butyl 4-((6-(2-allyl-3-oxo-6-(m-tolylamino)-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [0942] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (600 mg, 1.131 mmol) in Acetic acid (10 ml), m-toluidine (2, 121 mg, 1.131 mmol) was added and the reaction mixture was stirred at RT for 16 h. The progress of the reaction was monitored by TLC. The reaction mixture was concentrated under vacuum. The crude residue was neutralized by aqueous sodium bicarbonate solution (50 ml) and extracted with 10% methanol-DCM. The combined organic layers were dried over sodium sulfate and concentrated under vacuum. The crude product was purified by flash column chromatography (silica-gel, mesh size 60-120) using ethyl acetate (100%) as an eluent to obtain desired product tert-butyl 4-((6-(2-allyl-3-oxo-6-(m-tolylamino)-2,3-dihydro-1H-pyrazolo[3,4-
d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (400 mg, 0.572 mmol, 50.6 % yield) as a yellow solid. [0943] 2-allyl-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-6-(m-tolylamino)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one [0944] To a stirred solution of tert-butyl 4-((6-(2-allyl-3-oxo-6-(m-tolylamino)-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (200 mg, 0.359 mmol) in DCM (10 ml), 4M HCl in dioxane (12.91 mg, 0.359 mmol) was added and the reaction mixture was stirred at RT for 16 h. The progress of the reaction was monitored by TLC. The reaction mixture was concentrated under vacuum. The residue was purified by prep-HPLC column no-S/DC/ARD/LC/22/29, X-SELECT C18(250*19*5U), 0.1% FA in H
2O. Pure fractions collected and lyophilized to get 2-allyl-1-(6-(piperidin-4-yloxy)pyridin- 2-yl)-6-(m-tolylamino)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (125 mg, 0.264 mmol, 73.7 % yield) as an off white solid. [0945] Example 226. Synthesis of 2-allyl-6-(p-fluorophenylamino)-1-[6-(4-piperidyloxy)- 2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 304) [0946] This compound was made using a similar method as described in the synthesis of 2- allyl-6-((4-chlorophenyl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one. Yield 101 mg. [0947] Example 227. Synthesis of 2-ethyl-6-(1-methyl-1H-indazol-5-ylamino)-1-[6-(4- piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 306) [0948] This compound was made using a similar method as described in the synthesis of 2- allyl-6-((4-chlorophenyl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one. Yield 39 mg. [0949] Example 228. Synthesis of 2-ethyl-6-((1-methyl-1H-benzo[d]imidazol-5- yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (Compound 318) [0950] tert-butyl 4-((6-(2-ethyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [0951] To a stirred solution of tert-butyl 4-((6-(2-ethyl-6-(methylthio)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (300 mg, 0.617 mmol) in DCM (10 ml) at 0 °C, was added mCPBA (319 mg, 1.295 mmol) and the resulting mixture was stirred at RT for 2 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was diluted with DCM (300 mL) and washed with sodium bicarbonate solution (2 X 150 mL). The combined organic layer was dried over
Na
2SO
4, filtered and concentrated under reduced pressure to afford the crude tert-butyl 4-((6- (2-ethyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2- yl)oxy)piperidine-1-carboxylate (250 mg, 0.741 mmol, 84 % yield) as pale yellow solid. [0952] tert-butyl 4-((6-(2-ethyl-6-((1-methyl-1H-benzo[d]imidazol-5-yl)amino)-3-oxo-2,3- dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [0953] To a stirred solution of tert-butyl 4-((6-(2-ethyl-6-(methylsulfonyl)-3-oxo-2,3- dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (400 mg, 0.771 mmol) in acetic acid (5 mL), was added 1-methyl-1H-benzo[d]imidazol-5-amine (114 mg, 0.771 mmol) at room temperature. The reaction mixture was stirred at rt for 16 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was concentrated under reduced pressure. The residue was basified with sodium bicarbonate and extracted with ethyl acetate (10 mL x 2). The combined organic layer was dried over Na2SO4, filtered, and concentrated under reduced pressure. The resulting crude material was purified by flash chromatography (SiO2/100-200 mesh; 10-15% methanol- DCM) to afford tert-butyl 4-((6-(2-ethyl-6-((1-methyl-1H-benzo[d]imidazol-5- yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine- 1-carboxylate (250 mg, 0.213 mmol, 27.7 % yield) as a pale brown solid. [0954] 2-ethyl-6-((1-methyl-1H-benzo[d]imidazol-5-yl)amino)-1-(6-(piperidin-4- yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0955] To a stirred solution of tert-butyl 4-((6-(2-ethyl-6-((1-methyl-1H-benzo[d]imidazol-5- yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine- 1-carboxylate (200 mg, 0.341 mmol) in 1,4-dioxane (2 mL), was added 4M HCl in 1,4- dioxane (0.5 mL) at 0 °C. The resulting reaction mixture was stirred at room temperature for 8 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was concentrated under reduced pressure. The resultant crude residue was purified by prep. X-Select C18 (19*250, 5U), Mobile phase A: 10 MM ammonium acetate in H
2O, Mobile phase B: acetonitrile) to give 2-ethyl-6-((1-methyl-1H- benzo[d]imidazol-5-yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one (22 mg, 0.045 mmol, 12.60 % yield) as an off white solid. [0956] Example 229. Synthesis of 2-allyl-6-((1-methyl-1H-benzo[d]imidazol-5-yl)amino)- 1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 319) [0957] tert-butyl 4-((6-(2-Allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate
[0958] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (200 mg, 0.401 mmol) in DCM (10 ml) at 0 °C, was added m-CPBA (208 mg, 0.842 mmol) and the resulting mixture was stirred at RT for 2 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was diluted with DCM (300 mL) and washed with sodium bicarbonate solution (2 X 150 mL). The combined organic layer was dried over Na2SO4, filtered and concentrated under reduced pressure to afford the crude tert-butyl 4-((6- (2-allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2- yl)oxy)piperidine-1-carboxylate (180 mg, 0.292 mmol, 72.7 % yield) as pale yellow solid. [0959] tert-butyl 4-((6-(2-allyl-6-((1-methyl-1H-benzo[d]imidazol-5-yl)amino)-3-oxo-2,3- dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [0960] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (200 mg, 0.377 mmol) in acetic acid (5 mL) was added 1-methyl-1H-benzo[d]imidazol-5-amine (61.0 mg, 0.415 mmol) at room temperature. The reaction mixture was stirred at rt for 16 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was concentrated under reduced pressure. The residue was basified with sodium bicarbonate and extracted with ethyl acetate (10 mL x 2). The combined organic layer was dried over Na
2SO
4, filtered, and concentrated under reduced pressure. The crude product was purified by flash chromatography (SiO2/100-200 mesh; 5-8% methanol- DCM) to afford tert- butyl 4-((6-(2-allyl-6-((1-methyl-1H-benzo[d]imidazol-5-yl)amino)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (250 mg, 0.230 mmol, 61.0 % yield)) as a pale brown solid. [0961] 2-allyl-6-((1-methyl-1H-benzo[d]imidazol-5-yl)amino)-1-(6-(piperidin-4- yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0962] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-((1-methyl-1H-benzo[d]imidazol-5- yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine- 1-carboxylate (100 mg, 0.167 mmol) in 1,4-dioxane (2 mL), was added 4M HCl in 1,4- dioxane (0.5 mL) at 0 °C. The resulting reaction mixture was stirred at room temperature for 8 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was concentrated under reduced pressure. The residue was purified by prep. X-Select C18 (19*250, 5U), Mobile phase A: 10 MM ABC in H
2O, Mobile phase B: acetonitrile) to give 2-allyl-6-((1-methyl-1H-benzo[d]imidazol-5-yl)amino)-1-(6-(piperidin- 4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (25.5 mg, 0.051
mmol, 30.6 % yield) as an off white solid. [0963] Example 230. Synthesis of 2-allyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-6-(6- quinolylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 325) [0964] This compound was made using a similar method as described in the synthesis of 2- allyl-6-(2-methoxy-4-pyridylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro- 3H-1,2,5,7-tetraazainden-3-one using tert-butyl 4-[6-(2-allyl-6-amino-3-oxo-1,2-dihydro-3H- 1,2,5,7-tetraazainden-1-yl)-2-pyridyloxy]-1-piperidinecarboxylate (100 mg) and 6- bromoquinoline (44.5 mg). Yield 5.9 mg. [0965] Example 231. Synthesis of 5‐[(1‐{6‐[(1‐methylpiperidin‐4‐yl)oxy]pyridin‐2‐yl}‐3‐ oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐6‐yl)amino]pyridine‐3‐ carbonitrile (Compound 330) [0966] tert‐butyl 4‐[(6‐{6‐[(5‐cyanopyridin‐3‐yl)amino]‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐ 1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl}pyridin‐2‐yl)oxy]piperidine‐1‐carboxylate [0967] This intermediate was made using a similar method as described in the synthesis of 2- allyl-6-(2-methoxy-4-pyridylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro- 3H-1,2,5,7-tetraazainden-3-one using tert‐butyl 4‐({6‐[6‐amino‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐ 1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐2‐yl}oxy)piperidine‐1‐carboxylate (204 mg) and 5‐bromopyridine‐3‐carbonitrile (2 equiv.). Yield: 235 mg, purity 80% (77%). [0968] 5‐({3‐oxo‐1‐[6‐(piperidin‐4‐yloxy)pyridin‐2‐yl]‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐ pyrazolo[3,4‐d]pyrimidin‐6‐yl}amino)pyridine‐3‐carbonitrile [0969] Trifluoroacetic acid was added to a stirred solution of tert‐butyl 4‐[(6‐{6‐[(5‐ cyanopyridin‐3‐yl)amino]‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐ yl}pyridin‐2‐yl)oxy]piperidine‐1‐carboxylate (235 mg). Yield: 199 mg (crude). [0970] 5‐[(1‐{6‐[(1‐methylpiperidin‐4‐yl)oxy]pyridin‐2‐yl}‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐ 1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐6‐yl)amino]pyridine‐3‐carbonitrile [0971] This compound was made using a similar method as described in the synthesis of 2- allyl-6-(2-methoxy-4-pyridylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro- 3H-1,2,5,7-tetraazainden-3-one using 5‐({3‐oxo‐1‐[6‐(piperidin‐4‐yloxy)pyridin‐2‐yl]‐2‐ (prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐6‐yl}amino)pyridine‐3‐carbonitrile (170 mg, 80% purity). Yield: 48 mg FA salt (31%) as a pale-yellow powder. [0972] Example 232. Synthesis of 6‐[(1‐methyl‐1H‐indazol‐5‐yl)amino]‐1‐(6‐{[(3R)‐1‐ methylpiperidin‐3‐yl]oxy}pyridin‐2‐yl)‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐ d]pyrimidin‐3‐one (Compound 331) [0973] This compound was made using a similar method as described in the synthesis of 2-
allyl-6-((4-chlorophenyl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one using 6‐[(1‐methyl‐1H‐indazol‐5‐yl)amino]‐1‐{6‐[(3R)‐ piperidin‐3‐yloxy]pyridin‐2‐yl}‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐ one; trifluoroacetic acid (115 mg). Yield: 94 mg TFA salt (80%) as a pale-yellow powder. [0974] Example 233. Synthesis of 2-allyl-6-((3-(methyl-d3)phenyl)amino)-1-(6- (piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 334) and 2-allyl-6-((3-(methyl-d3)phenyl)amino)-1-(6-((1-methylpiperidin- 4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 333) [0975] 1-bromo-3-(methyl-d3)benzene [0976] To a stirred solution of 1,3-dibromobenzene (4 g, 16.96 mmol) in THF (20 ml) was added n-BuLi (21.19 ml, 33.9 mmol) at -78 °C under inert atmosphere. The mixture was then stirred for 30 min, followed by the addition of CD3I (2.156 ml, 33.9 mmol). The mixture was stirred for 1 h at -78 °C. The progress of the reaction was monitored by TLC and GCMS. After completion of the reaction, the reaction was quenched with ice-cold water and extracted with ethyl acetate (2 X 100 mL). The combined organic layers were dried over anhydrous Na2SO4. The solvent was evaporated under reduced pressure to give 1-bromo-3-(methyl- d3)benzene (1.5 g, 8.62 mmol, 50.8 % yield) as pale yellow gummy liquid. [0977] tert-butyl (3-(methyl-d3)phenyl)carbamate [0978] To a stirred solution of 1-bromo-3-(methyl-d3)benzene (400 mg, 2.298 mmol), tert- butyl carbamate 3538 mg, 4.60 mmol), Cs2CO3 (2246 mg, 6.89 mmol) and Xphos (219 mg, 0.460 mmol) in 1,4-dioxane (40 ml), were added. The mixture was degassed for 20 minutes at 25 °C. Then was added Pd(OAc)2 (103 mg, 0.460 mmol) and the mixture was stirred at 100 °C for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was filtered using a sintered funnel, and collected fractions were concentrated under reduced pressure to give crude compound, which was purified by flash column chromatography (silica mesh 100-200 at eluent of 1-10% ethyl acetate and hexane) to give the pure compound tert-butyl (3-(methyl-d3)phenyl)carbamate (200 mg, 0.846 mmol, 36.8 % yield) as yellow solid. [0979] Preparation of 3-(methyl-d3)aniline [0980] To a stirred solution of tert-butyl (3-(methyl-d3)phenyl)carbamate (200 mg, 0.951 mmol) in dioxane (2 mL) was added 4M HCl in dioxane (0.3 mL, 41.6 mg, 1.141 mmol) at 0 °C and under inert atmosphere. The mixture was stirred at 25 °C for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was concentrated under reduced pressure, and the residue was quenched with aq.
sodium bicarbonate solution (10 mL) and extracted with EtOAc (2 X 50 mL). The combined organic layers was dried over anhydrous Na
2SO
4, evaporated under reduced pressure to give 3-(methyl-d3)aniline (90 mg, 0.694 mmol, 73.0 % yield) as a brown liquid. [0981] tert-butyl 4-((6-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [0982] To the stirred solution of tert-butyl 4-((6-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (500 mg, 1.003 mmol) in DCM (5 ml) was added m-CPBA (346 mg, 2.006 mmol) at room temperature under inert atmosphere, then reaction mixture was allowed to stir at rt for 2 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was quenched with aq. sodium bicarbonate solution (50 mL) and extracted with DCM. The combined organic layers was dried over Na2SO4 and concentrated under reduced pressure to give tert-butyl 4-((6-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (450 mg, 0.806 mmol, 80 % yield) as an off-white solid. This crude compound was taken for the next step without any further purification. [0983] tert-butyl 4-((6-(2-allyl-6-((3-(methyl-d3)phenyl)amino)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [0984] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (450 mg, 0.848 mmol) in acetic acid (3 ml), was added 3-(methyl-d3)aniline (93 mg, 0.848 mmol) at RT. The reaction mixture was allowed to stir at room temperature for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the solvent was evaporated under reduced pressure, and the residue was quenched with aq. sodium bicarbonate solution (100 mL) and extracted with 5% MeOH in DCM. The combined organic layers were dried over anhydrous Na2SO4, filtered, and the filtrate was concentrated under reduced pressure to give a crude compound. This crude compound was purified by column chromatography (silica mesh 100-200 at eluent of 1-10% MeOH and DCM) to give tert-butyl 4-((6-(2-allyl-6-((3-(methyl-d3)phenyl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (150 mg, 0.268 mmol, 31.5 % yield) as an off-white solid. [0985] 2-allyl-6-((3-(methyl-d3)phenyl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0986] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-((3-( (methyl-d3)phenyl)amino)-3-
oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1- carboxylate (500 mg, 0.892 mmol) in 1,4-dioxane, was added 4M HCl in dioxane (0.3 mL, 39.0 mg, 1.070 mmol) at 0 °C and under inert atmosphere. The mixture was stirred at 25 °C for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was concentrated under reduced pressure, and the crude compound was washed with n-hexane, followed by purification by prep HPLC (Column: X- select CSH C18, Mobile phase A: Water (with 0.1% AA), Mobile phase B: acetonitrile, Flow rate-15.0 mL/Min, Rt-12.8) to give 2-allyl-6-((3-(methyl-d3)phenyl)amino)-1-(6-(piperidin- 4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (102 mg, 0.221 mmol, 24.83 % yield) as a white solid. [0987] 2-allyl-6-((3-(methyl-d3)phenyl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2- yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0988] To a stirred solution of 2-allyl-6-((3-(methyl-d3)phenyl)amino)-1-(6-(piperidin-4- yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (290 mg, 0.630 mmol) in THF (2 ml) was added 20% aq. formaldehyde (255 mg, 3.15 mmol), followed by the addition of STAB (400 mg, 1.889 mmol) portion-wise. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was quenched with TFA followed by NH3 in methanol. The mixture was extracted with 10% MeOH in DCM. The combined organic layers were dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to afford crude compound which was purified by Prep HPLC (Column: X-select CSH C18, Mobile phase A: Water (with 0.1% AA), Mobile phase B: acetonitrile, Flow rate-15.0 mL/Min, Rt-12.8) to give 2-allyl-6-((3- (methyl-d3)phenyl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one (86 mg, 0.181 mmol, 28.8 % yield) as a white solid. [0989] Example 234. Synthesis of 2-methyl-6-((1-methyl-1H-indol-5-yl)amino)-1-(6- (piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 336) and 2-methyl-6-((1-methyl-1H-indol-5-yl)amino)-1-(6-((1- methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 360) [0990] tert-butyl 4-((6-(2-methyl-6-(methylthio)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [0991] A stirred solution of tert-butyl 4-((6-bromopyridin-2-yl)oxy)piperidine-1-carboxylate (1 g, 2.80 mmol), 2-methyl-6-(methylthio)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (0.549 g, 2.80 mmol), K
2CO
3 (1.161 g, 8.40 mmol) and N,N-Dimethyl ethylenediamine
(0.247 g, 2.80 mmol) in 1,4-dioxane (15 ml) was degassed for 20 min at rt under inert atmosphere. Then was added CuI (0.532 g, 2.80 mmol) and the mixture was stirred at 100 °C for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was filtered through celite and washed with ethyl acetate (2 X 100 mL). The collected organic layer was concentrated under reduced pressure to give the crude compound which was purified by column chromatography (SiO
2/230-400 mesh; 50- 60% EtOAc in hexane) to give tert-butyl 4-((6-(2-methyl-6-(methylthio)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (0.9 g, 1.847 mmol, 66.0 % yield) as an off-white solid. [0992] tert-butyl 4-((6-(2-methyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [0993] To a solution of tert-butyl 4-((6-(2-methyl-6-(methylthio)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (1 g, 2.116 mmol) in DCM (10 ml) was added mCPBA (0.548 g, 3.17 mmol) at 0 °C under inert atmosphere. Then, the reaction was stirred at rt for 2 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, aq. NaHCO3 (100 mL) was added, and the mixture was extracted with ethyl acetate (2 X 150 mL). The combined organic layers was washed with brine solution (150 ml) and dried over Na2SO4, filtered and concentrated under reduced pressure to give tert-butyl 4-((6-(2-methyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (900 mg, 1.463 mmol, 69.1 % yield) as a yellow solid. This crude compound was taken as such for the next step without further purification. [0994] tert-butyl 4-((6-(2-methyl-6-((1-methyl-1H-indol-5-yl)amino)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [0995] To a stirred solution of tert-butyl 4-((6-(2-methyl-6-(methylsulfonyl)-3-oxo-2,3- dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)-3,4-dihydropyridin-2-yl)oxy)piperidine-1- carboxylate (900 mg, 1.777 mmol) in acetonitrile (10 ml) was added 1-methyl-1H-indol-5- amine (312 mg, 2.132 mmol) at rt and the mixture was stirred at 70 °C for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was cooled to 0 °C. A solid was collected by filtration and washed with n- hexane (50 ml) and dried under vacuum to afford tert-butyl 4-((6-(2-methyl-6-((1-methyl-1H- indol-5-yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2- yl)oxy)piperidine-1-carboxylate (700 mg, 0.994 mmol, 55.9 % yield) as a brown colored solid.
[0996] 2-methyl-6-((1-methyl-1H-indol-5-yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)- 1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0997] To a stirred solution of tert-butyl 4-((6-(2-methyl-6-((1-methyl-1H-indol-5-yl)amino)- 3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1- carboxylate (550 mg, 0.964 mmol) in DCM (10 ml) was added 4M HCl in dioxane (1.205 ml, 4.82 mmol) at 0 °C and under inert atmosphere. The mixture was then stirred at rt for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the solvent was evaporated under reduced pressure and the residue was washed with n-hexane to give the crude compound which was purified by prep HPLC (Column: X-select CSH C18, Mobile Phase A: Ammonium acetate in water, Mobile Phase B: acetonitrile, Flowrate:15.0mL/Min, Rt-10.8) to give 2-methyl-6-((1-methyl-1H-indol-5-yl)amino)-1-(6- (piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (12 mg, 0.026 mmol, 2.65 % yield) as a pale yellow solid. [0998] 2-methyl-6-((1-methyl-1H-indol-5-yl)amino)-1-(6-((1-methylpiperidin-4- yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [0999] To a stirred solution of 2-methyl-6-((1-methyl-1H-indol-5-yl)amino)-1-(6-(piperidin- 4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (50 mg, 0.106 mmol) in THF (10 ml) was added 37% formaldehyde (43.1 mg, 0.531 mmol) followed by the addition of STAB (67.6 mg, 0.319 mmol) at rt and the mixture was stirred for 1 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was quenched with NH
3 in MeOH followed by TFA at rt and water. The mixture was extracted with 10% MeOH in DCM (2 X 100 mL). The combined organic layers was dried over anhydrous Na
2SO
4. The solvent was evaporated under reduced pressure to give the crude compound which was purified by prep HPLC (Column: X-select CSH C18, Mobile phase A: Water (with 0.1% AA), Mobile phase B: acetonitrile, Flow rate-15.0 mL/Min, Rt-12.8) to give 2-methyl-6-((1-methyl-1H-indol-5-yl)amino)-1-(6-((1- methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (5.1 mg, 10.31 µmol, 9.71 % yield) as an off-white solid. [1000] Example 235. Synthesis of 2-allyl-1-(6-((2,2-dimethylpiperidin-4-yl)oxy)pyridin- 2-yl)-6-((1-methyl-1H-indazol-5-yl)amino)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3- one (Compound 337) and 2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(6-((1,2,2- trimethylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3- one (Compound 343) [1001] tert-butyl 4-hydroxy-2,2-dimethylpiperidine-1-carboxylate
[1002] To a stirred solution of tert-butyl 2,2-dimethyl-4-oxopiperidine-1-carboxylate (500 mg, 2.200 mmol) in MeOH (10 mL) was added sodium borohydride (166 mg, 4.40 mmol) at 0 °C. The reaction was allowed to stir at 25 °C for 16 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was diluted with water and extracted with ethyl acetate (100 mL x 2). The combined organic layer was dried over Na
2SO
4, filtered, and concentrated under reduced pressure to afford tert-butyl 4- hydroxy-2,2-dimethylpiperidine-1-carboxylate (500 mg, 2.093 mmol, 95 % yield) as a colorless liquid. [1003] tert-butyl 4-((6-bromopyridin-2-yl)oxy)-2,2-dimethylpiperidine-1-carboxylate [1004] To a stirred solution of tert-butyl 4-hydroxy-2,2-dimethylpiperidine-1-carboxylate (500 mg, 2.180 mmol) in THF (10 ml) was added NaH (60% in oil, 157 mg, 6.54 mmol). After 10 min at 25 °C, was added 2,6-dibromopyridine (3, 620 mg, 2.62 mmol). The reaction was allowed to stir at 25 °C for 2 h. The progress of the reaction was monitored by TLC and UPLC. After completion of the reaction, ice water was added, and the product was extracted with ethyl acetate. The combined organic layer was washed with brine, dried over anhydrous sodium sulfate, and concentrated under reduced pressure. The resulting crude material was purified by flash chromatography (SiO
2/100-200 mesh; 10-20% ethyl acetate/hexane) to afford tert-butyl 4-((6-bromopyridin-2-yl)oxy)-2,2-dimethylpiperidine-1-carboxylate (850 mg, 1.434 mmol, 65.8 % yield) as an off-white solid. [1005] tert-butyl 4-((6-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2,2-dimethylpiperidine-1-carboxylate [1006] A stirred solution of tert-butyl 4-((6-bromopyridin-2-yl)oxy)-2,2-dimethylpiperidine- 1-carboxylate (600 mg, 1.292 mmol), 2-allyl-6-(methylthio)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (345 mg, 1.551 mmol, Potassium Carbonate (536 mg, 3.88 mmol) and N,N-dimethyl-ethylenediamine (228 mg, 2.58 mmol) in dioxane (10 ml) was degassed for 20 min at rt under inert atmosphere. Then CuI (114 mg, 0.600 mmol) was added and the mixture was stirred at 100 °C for 16 h. The progress of the reaction was monitored by UPLC. After completion of the reaction, the reaction mass was diluted with DCM and filtered through celite pad. The collected filtrate was concentrated under reduced pressure. The residue was purified by flash column chromatography (silica gel, 100-200 mesh size) using ethyl acetate- pet ether (10% - 20%) as an eluent to obtain tert-butyl 4-((6-(2-allyl-6-(methylthio)-3-oxo- 2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2,2-dimethylpiperidine-1- carboxylate (400 mg, 0.615 mmol, 47.6 % yield) off white solid. [1007] tert-butyl 4-((6-(2-allyl-6-(methylsulfinyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-
d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2,2-dimethylpiperidine-1-carboxylate [1008] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2,2-dimethylpiperidine-1-carboxylate (6, 400 mg, 0.760 mmol) in DCM (5 ml) at 0 °C was added mCPBA (262 mg, 1.519 mmol) and the mixture was stirred at RT for 2 h. The progress of the reaction was monitored by TLC and UPLC. After completion of the reaction, ice water was added and the mixture was extracted with DCM (100 mL X 2). The combined organic layer was washed with aqueous sodium bicarbonate solution, dried over anhydrous sodium sulfate, and concentrated under reduced pressure to obtained tert-butyl 4-((6-(2-allyl-6-(methylsulfinyl)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2,2-dimethylpiperidine-1-carboxylate (410 mg, 0.491 mmol, 64.7 % yield) as a pale yellow semi-solid. [1009] tert-butyl 4-((6-(2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2,2-dimethylpiperidine-1-carboxylate [1010] To a stirred solution tert-butyl 4-((6-(2-allyl-6-(methylsulfinyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2,2-dimethylpiperidine-1-carboxylate (410 mg, 0.756 mmol) in acetonitrile (5 mL) was added 1-methyl-1H-indazol-5-amine (133 mg, 0.907 mmol) at room temperature. The reaction mixture was subjected to stirring at 70 °C for 16 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was diluted with water and extracted with 10% methanol-DCM (50 mL x 2). The combined organic layer was dried over Na2SO4, filtered, and concentrated under reduced pressure. The crude material was purified by flash column chromatography (silica gel, 100-200 mesh size) using ethyl acetate-hexane (40 % to 50%) as an eluent to obtain tert-butyl 4-((6-(2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2,2-dimethylpiperidine-1-carboxylate (425 mg, 0.506 mmol, 66.9 % yield) as a brown solid. [1011] 2-allyl-1-(6-((2,2-dimethylpiperidin-4-yl)oxy)pyridin-2-yl)-6-((1-methyl-1H-indazol- 5-yl)amino)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1012] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)- 3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2,2- dimethylpiperidine-1-carboxylate (400 mg, 0.639 mmol) in 1,4-dioxane (5 mL), was added 4M HCl in 1,4-dioxane (2.0 mL) at 0 °C. The resulting reaction mixture was stirred at room temperature for 4 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was concentrated under reduced pressure. The crude residue was purified by prep. HPLC X-Select C18 (19*250, 5mL), Mobile phase A: 10 MM AA in
H
2O, Mobile phase B: acetonitrile) to give 2-allyl-1-(6-((2,2-dimethylpiperidin-4- yl)oxy)pyridin-2-yl)-6-((1-methyl-1H-indazol-5-yl)amino)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (195.05 mg, 0.364 mmol, 56.9 % yield) as an off white-solid. [1013] 2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(6-((1,2,2-trimethylpiperidin-4- yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1014] To a stirred solution of 2-allyl-1-(6-((2,2-dimethylpiperidin-4-yl)oxy)pyridin-2-yl)-6- ((1-methyl-1H-indazol-5-yl)amino)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (450 mg, 0.856 mmol) in THF (10 mL) was added formaldehyde (0.382 ml, 5.14 mmol) at 25 °C. The reaction mixture stirred at 25 °C for 5 min. Then STAB (1089 mg, 5.14 mmol) was added portion-wise. After addition, the reaction mixture was stirred at 25 °C for 20 min. The progress of the reaction was monitored by TLC and LCMS. The reaction mixture was quenched with TFA, followed by NH3 in MeOH, diluted with water and extracted with 10% MeOH in DCM (2 X 100 mL). The combined organic extracts was washed with NaHCO3, dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure to afford crude compound, which was purified by prep. HPLC X-Select C18 (19*250, 5mL), Mobile phase A: 10 MM AA in H
2O, Mobile phase B: acetonitrile) to give 2-allyl-6-((1-methyl-1H- indazol-5-yl)amino)-1-(6-((1,2,2-trimethylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one (135.83 mg, 0.247 mmol, 28.8 % yield) as an off-white solid. [1015] Example 236. Synthesis of 2-ethyl-6-[(1-methyl-1H-pyrazol-4-yl)amino]-1-{6-[(1- methylpiperidin-4-yl)oxy]pyridin-2-yl}-1H,2H,3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 341) [1016] This compound was made using a similar method as described in the synthesis of 2- ethyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-6-[m-(5-pyrimidinyl)phenylamino]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one using 2-ethyl-6-[m-(1-methyl-4- pyrazolyl)phenylamino]-1-[6-(4-piperidyloxy)-2-pyridyl]-1,2-dihydro-3H-1,2,5,7- tetraazainden-3-one (150 mg). Yield 77 mg. [1017] Example 237. Synthesis of 6‐[(5‐methoxypyridin‐3‐yl)amino]‐1‐{6‐[(1‐ methylpiperidin‐4‐yl)oxy]pyridin‐2‐yl}‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐ d]pyrimidin‐3‐one (Compound 342) [1018] This compound was made using a similar method as described in the synthesis of 2- allyl-6-(2-methoxy-4-pyridylamino)-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-1,2-dihydro- 3H-1,2,5,7-tetraazainden-3-one using 6‐[(5‐methoxypyridin‐3‐yl)amino]‐1‐[6‐(piperidin‐4‐ yloxy)pyridin‐2‐yl]‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one (198 mg). Yield: 157 mg TFA salt (62%) as a yellow powder.
[1019] Example 238. Synthesis of 2-allyl-6-((3-methyl-1H-indazol-5-yl)amino)-1-(6- (piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 345) and 2-allyl-6-((3-methyl-1H-indazol-5-yl)amino)-1-(6-((1- methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 355) [1020] tert-butyl 4-((6-(2-allyl-6-((3-methyl-1H-indazol-5-yl)amino)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [1021] To a stirred solution tert-butyl 4-((6-(2-allyl-6-(methylsulfinyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (1.0 g, 1.943 mmol ) in acetonitrile (5 mL) 3-methyl-1H-indazol-5-amine (0.286 g, 1.943 mmol) was added at room temperature. The reaction mixture was subjected to stirring at 70 °C for 16 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was diluted with water and extracted with 10% methanol-DCM (50 mL x 2). The combined organic layer was dried over Na2SO4, filtered, and concentrated under reduced pressure. The above crude was purified by flash column chromatography (silica gel, 100-200 mesh size) using ethyl acetate-hexane (40 % to 50%) as an eluent to obtain tert-butyl 4-((6- (2-allyl-6-((3-methyl-1H-indazol-5-yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (1.0 g, 1.601 mmol, 82 % yield) as a brown solid. [1022] 2-allyl-6-((3-methyl-1H-indazol-5-yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)- 1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1023] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-((3-methyl-1H-indazol-5-yl)amino)- 3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1- carboxylate (1.0 g, 1.673 mmol) in 1,4-dioxane (5 mL), was added 4M HCl in 1,4-dioxane (2.0 mL) at 0 °C. The resulting reaction mixture was stirred at room temperature for 4 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was concentrated under reduced pressure. Of the crude material, 800 mg was taken for the next step without any further purification. The remaining 200 mg crude residue was purified by prep. HPLC X-Select C18 (19*250, 5mL), Mobile phase A: 10 MM ABC in H
2O, Mobile phase B: acetonitrile) to give 2-allyl-6-((3-methyl-1H-indazol-5-yl)amino)-1-(6- (piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (0.100 g, 0.199 mmol, 11.89 % yield ) as an off white-solid. [1024] 2-allyl-6-((3-methyl-1H-indazol-5-yl)amino)-1-(6-((1-methylpiperidin-4- yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one
[1025] To a stirred solution of 2-allyl-6-((3-methyl-1H-indazol-5-yl)amino)-1-(6-(piperidin- 4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (800 mg, 1.608 mmol) in THF (10 mL) was added formaldehyde (20% Aq., 4 mL) at 25 °C. The reaction mixture was stirred at 25 °C for 5 min. Then, was added portion-wise STAB (1022 mg, 4.82 mmol). After the complete addition of STAB, the reaction mixture was stirred at 25 °C for 20 min. The reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was quenched with TFA, followed by NH3 in MeOH diluted with water and extracted with 10% MeOH in DCM (2 X 100 mL). The above combined organic extracts were washed with NaHCO3, dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure. The resultant crude material was purified by prep. HPLC (ZORBAX 50*21mm), Mobile phase A: 10 MM ABC in H
2O, Mobile phase B: acetonitrile) to give 2- allyl-6-((3-methyl-1H-indazol-5-yl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)- 1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (125mg, 0.16 mmol, 10.2% yield) as an off- white solid. [1026] Example 239. Synthesis of 2-allyl-6-((1,3-dimethyl-1H-indazol-5-yl)amino)-1-(6- (piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 347) and 2-allyl-6-((1,3-dimethyl-1H-indazol-5-yl)amino)-1-(6-((1- methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 346) [1027] tert-butyl 4-((6-(2-allyl-6-((1,3-dimethyl-1H-indazol-5-yl)amino)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [1028] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-(methylsulfinyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (1.0 g, 1.943 mmol) in acetonitrile (5 mL) was added 1,3-dimethyl-1H-indazol-5-amine (0.313 g, 1.943 mmol) at room temperature. The reaction mixture was subjected to stirring at 70 °C for 16 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was diluted with water and extracted with 10% methanol-DCM (50 mL x 2). The combined organic layer was dried over Na
2SO
4, filtered, and concentrated under reduced pressure. The crude material was purified by flash column chromatography (silica gel, 100- 200 mesh size) using ethyl acetate-hexane (40% to 50%) as an eluent to obtain tert-butyl 4- ((6-(2-allyl-6-((1,3-dimethyl-1H-indazol-5-yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (1.1 g, 1.068 mmol, 55.0 % yield) as a brown solid. [1029] 2-allyl-6-((1,3-dimethyl-1H-indazol-5-yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-
yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1030] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-((1,3-dimethyl-1H-indazol-5- yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine- 1-carboxylate (1.0 g, 1.635 mmol) in 1, 4 - dioxane (5 mL), was added 4M HCl in 1,4- dioxane (2.0 mL) at 0 °C. The resulting reaction mixture was stirred at room temperature for 4 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was concentrated under reduced pressure. Of the resulting crude residue, 200 mg was purified by prep HPLC, and the remaining was taken to the next step without any further purification. HPLC X-Select C18 (19*250, 5mL), Mobile phase A: 10 MM ABC in H
2O, Mobile phase B: acetonitrile) to get 2-allyl-6-((1,3-dimethyl-1H-indazol-5-yl)amino)- 1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (0.070 g, 0.134 mmol, 8.18 % yield) as an off white-solid. [1031] 2-allyl-6-((1,3-dimethyl-1H-indazol-5-yl)amino)-1-(6-((1-methylpiperidin-4- yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1032] To a stirred solution of 2-allyl-6-((1,3-dimethyl-1H-indazol-5-yl)amino)-1-(6- (piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (0.550 g, 1.075 mmol) in THF (10 mL) was added formaldehyde (0.214 ml, 2.150 mmol) at 25 °C. The reaction mixture was stirred at 25 °C for 5 min. Then, STAB (0.456 g, 2.150 mmol) was added portion-wise. After the complete addition of STAB, the reaction mixture was stirred at 25 °C for 20 min. The progress of the reaction was monitored by TLC and LCMS. The reaction mixture was quenched with TFA, followed by NH
3 in MeOH diluted with water and extracted with 10% MeOH in DCM (2 X 100 mL). The combined organic extracts were washed with NaHCO
3, dried over anhydrous Na
2SO
4, filtered, and concentrated under reduced pressure. The residue was purified by prep. HPLC (SHIMPACK C18(250*19.5 mm), Mobile phase A: 10 MM ABC in H
2O, Mobile phase B: acetonitrile) to give 2-allyl-6- ((1,3-dimethyl-1H-indazol-5-yl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (0.160 g, 0.300 mmol, 27.9 % yield) as an off- white solid. [1033] Example 240. Synthesis of 2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(6-((1- (oxetan-3-yl)piperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin- 3-one (Compound 349) [1034] To a solution of 2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(6-(piperidin-4- yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (0.2 g, 0.402 mmol) in 1,2-DCE (10 ml) was added oxetan-3-one (0.058 g, 0.804 mmol) and the mixture was stirred
at 60 °C for 1 h, STAB (0.128 g, 0.603 mmol) was added at room temperature and the mixture stirred for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was quenched with ice cold water (100 mL) and extracted with DCM (2 X 100 mL). The combined organic layers were dried over anhydrous Na2SO4, concentrated under reduced pressure to give the crude compound, which was purified by column chromatography (X Select C-8, 19 X 250, Mobile phase A: 10mm ABC in Water, Mobile phase B: acetonitrile) to give 2-allyl-6-((1-methyl-1H-indazol-5- yl)amino)-1-(6-((1-(oxetan-3-yl)piperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one (180 mg, 0.321 mmol, 53.2 % yield). [1035] Example 241. Synthesis of 2-ethyl-6-((1-methyl-1H-indol-5-yl)amino)-1-(6- (piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 353) [1036] tert-butyl 4-((6-(2-ethyl-6-(methylthio)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [1037] To a stirred solution of tert-butyl 4-((6-bromopyridin-2-yl)oxy)piperidine-1- carboxylate (700 mg, 1.959 mmol) in 1,4-dioxane (20 ml) were added 2-ethyl-6-(methylthio)- 1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (412 mg, 1.959 mmol), K
2CO
3 (812 mg, 5.88 mmol), N,N-dimethyl-ethylenediamine (173 mg, 1.959 mmol) and the mixture was degassed for 20 min at rt under inert atmosphere. Then was added CuI (373 mg, 1.959 mmol) at rt and the mixture was again degassed for 5 min. The reaction mixture was stirred at 110 °C for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was filtered through celite and washed with ethyl acetate (2 X 100 mL). The filtrate was collected and concentrated under reduced pressure to give the crude compound which was purified by column chromatography (silica gel, 100-200 mesh size: using ethyl acetate- pet ether 40% - 60%) to give tert-butyl 4-((6-(2- ethyl-6-(methylthio)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2- yl)oxy)piperidine-1-carboxylate (900 mg, 1.794 mmol, 92 % yield). [1038] tert-butyl 4-((6-(2-ethyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [1039] To a solution of tert-butyl 4-((6-(2-ethyl-6-(methylthio)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (0.9 g, 1.850 mmol) in DCM (10 ml) was added mCPBA (0.479 g, 2.77 mmol) at 0 °C under inert atmosphere. The reaction mixture was stirred at rt for 2 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, aq. NaHCO
3 (150 mL) was added and the
mixture was extracted with ethyl acetate (2 X 150 mL). The combined organic layers was washed with brine solution (150 ml), dried over Na
2SO
4, filtered, and concentrated under reduced pressure to give tert-butyl 4-((6-(2-ethyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (0.9 g, 1.666 mmol, 90 % yield) as a yellow solid. This crude compound, as such, is taken for the next step without any further purification. [1040] tert-butyl 4-((6-(2-ethyl-6-((1-methyl-1H-indol-5-yl)amino)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [1041] To a stirred solution of tert-butyl 4-((6-(2-ethyl-6-(methylsulfonyl)-3-oxo-2,3- dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)-3,4-dihydropyridin-2-yl)oxy)piperidine-1- carboxylate (0.9 g, 1.729 mmol) in ACN (20 ml) was added 1-methyl-1H-indol-5-amine (0.303 g, 2.075 mmol) at rt under inert atmosphere. Then the reaction mixture was stirred at 70 °C for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was concentrated under reduced pressure. Then was added ice cold water (100 mL). The mixture was extracted with 10% MeOH in DCM (2 X 250 mL). The combined organic layers were dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to afford crude compound which was purified by flash column chromatography (silica-gel, mesh size 60-120: using ethyl acetate in n-hexane 70-80%) to obtain tert-butyl 4-((6-(2-ethyl-6-((1-methyl-1H-indol-5-yl)amino)-3- oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1- carboxylate (0.9 g, 1.509 mmol, 87 % yield) as a white solid. [1042] 2-ethyl-6-((1-methyl-1H-indol-5-yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1043] To a stirred solution of tert-butyl 4-((6-(2-ethyl-6-((1-methyl-1H-indol-5-yl)amino)-3- oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1- carboxylate (100 mg, 0.171 mmol) in MeOH (5 ml) was added oxalyl chloride (65.1 mg, 0.513 mmol) at 0 °C under inert atmosphere. Then, the reaction mixture was stirred at rt for 2 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, reaction mixture was concentrated under reduced pressure to get crude material which was purified by reverse phase column chromatography to afford pure compound 2- ethyl-6-((1-methyl-1H-indol-5-yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro- 3H-pyrazolo[3,4-d]pyrimidin-3-one (15.6 mg, 0.032 mmol, 18.82 % yield). [1044] Example 242. Synthesis of 2-allyl-6-((1-isobutyl-1H-indazol-5-yl)amino)-1-(6- (piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one
(Compound 356) and 2-allyl-6-((1-isobutyl-1H-indazol-5-yl)amino)-1-(6-((1- methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 394) [1045] 1-isobutyl-5-nitro-1H-indazole [1046] To a stirred solution of 1-iodo-2-methylpropane (0.714 mL, 6.13 mmol) and 5-nitro- 1H-indazole (500 mg, 3.06 mmol) in DMF (12 mL) was added sodium hydride (60% in oil) (88 mg, 3.68 mmol) at 0 °C and the mixture was stirred for 16 h at room temperature. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was quenched with ice-cold water, and the precipitate obtained was filtered. The precipitate was then dissolved in DCM and purified by flash column chromatography (silica gel, 60-120 using ethyl acetate-hexane (20 to 70%) as an eluent to obtain 1-isobutyl-5-nitro- 1H-indazole (0.155 g, 0.693 mmol, 22.61 % yield) as an orange solid. [1047] 1-isobutyl-1H-indazol-5-amine [1048] To a degassed solution of 1-isobutyl-5-nitro-1H-indazole (300 mg, 1.368 mmol) in MeOH (10 ml) was added 10% Pd/C (291 mg, 2.74 mmol) under an inert atmosphere. Then, the reaction mixture was stirred under a hydrogen atmosphere using hydrogen bladder pressure at room temperature for 16 hours. The progress of the reaction was monitored by TLC and UPLC. After completion of the reaction, the reaction mixture was filtered under a nitrogen atmosphere through a pad of celite and washed with MeOH (2 X 100 mL). The filtrate was concentrated under reduced pressure (bath temperature: 49 °C) to afford 1- isobutyl-1H-indazol-5-amine (290 mg, 1.165 mmol, 85 % yield) as an orange solid, which was taken into the next step without further purification. [1049] tert-butyl 4-((6-(2-allyl-6-((1-isobutyl-1H-indazol-5-yl)amino)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [1050] To a stirred solution tert-butyl 4-((6-(2-allyl-6-(methylsulfinyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (600 mg, 1.166 mmol) in acetonitrile (10 mL) was added 1-isobutyl-1H-indazol-5-amine (276 mg, 1.457 mmol) at room temperature. The reaction mixture was subjected to stirring at 70 °C for 16 h. The progress of the reaction was monitored by LCMS. After the completion of the reaction, the reaction mixture was concentrated under reduced pressure. The crude product was purified by flash column chromatography (silica gel, 100-200) using ethyl acetate-hexane (50 to 100%) as an eluent to obtain tert-butyl 4-((6-(2-allyl-6-((1-isobutyl-1H-indazol-5- yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine- 1-carboxylate (310 mg, 0.359 mmol, 30.8 % yield) as a red colored solid.
[1051] 2-allyl-6-((1-isobutyl-1H-indazol-5-yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)- 1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1052] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-((1-isobutyl-1H-indazol-5- yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine- 1-carboxylate (310 mg, 0.354 mmol) in 1,4-dioxane (10 mL), was added 4M HCl in 1,4- dioxane (5.0 mL) at 0 °C. The resulting reaction mixture was stirred at room temperature for 4 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was concentrated under reduced pressure. The crude residue was purified by prep-HPLC Shimpack C18(20*250)5u, Mobile phase A: 10 mM Ammonium Bi- Carbonate in water, Mobile phase B: acetonitrile) to give 2-allyl-6-((1-isobutyl-1H-indazol-5- yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3- one (372 mg, 0.494 mmol, 98% yield) as an off white solid. [1053] 2-allyl-6-((1-isobutyl-1H-indazol-5-yl)amino)-1-(6-((1-methylpiperidin-4- yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1054] To a stirred solution of 2-allyl-6-((1-isobutyl-1H-indazol-5-yl)amino)-1-(6-(piperidin- 4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (350 mg, 0.649 mmol) in THF (10 mL) was added 20% aq. formaldehyde (7 mL) at 25 °C. Then the reaction mixture was stirred at 25 °C for 5 min. sodium triacetoxyborohydride (275 mg, 1.297 mmol) was added portion-wise; after the complete addition of sodium triacetoxyborohydride, the reaction mixture was stirred at 25 °C for 20 min. The progress of the reaction was monitored by TLC and LCMS. The reaction mixture was quenched with TFA followed by NH
3 in MeOH, after which it was diluted with water and extracted with 10% MeOH in DCM (2 X 100 mL). The combined organic extract was washed with NaHCO
3, dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure to afford crude compound. The crude was purified by PREP-HPLC (xtim: xtimate c18, Mobile phase A: 0.1% FA in H
2O, Mobile phase B: acetonitrile) to give 2-allyl-6-((1-isobutyl-1H-indazol-5-yl)amino)-1-(6-((1- methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (118 mg, 0.211 mmol, 32.5 % yield) as a white fluffy solid. [1055] Example 243. Synthesis of rel-(R)-2-allyl-1-(6-(azepan-4-yloxy)pyridin-2-yl)-6- ((1-methyl-1H-indazol-5-yl)amino)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 357), rel-(R)-2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(6-((1- methylazepan-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 373), rel-(S)-2-allyl-1-(6-(azepan-4-yloxy)pyridin-2-yl)-6-((1-methyl-1H- indazol-5-yl)amino)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 358),
and rel-(S)-2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(6-((1-methylazepan-4- yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 374) [1056] tert-butyl 4-((6-(2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)azepane-1-carboxylate [1057] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)azepane-1-carboxylate (4.6 g, 8.45 mmol) in AcOH (30 ml) was added 1-methyl-1H-indazol-5-amine (1.492 g, 10.14 mmol) and the mixture was allowed to stir for 3 h. The progress of the reaction was monitored by TLC and UPLC. After completion of the reaction, the solvent was evaporated under reduced pressure. The residue was quenched with aq. NaHCO
3 solution (100 mL) and extracted with 10% MeOH in DCM (2 X 200 mL). The combined organic extracts was washed with brine (100 mL), dried over anhydrous sodium sulfate, filtered, and concentrated under reduced pressure to afford crude compound; which was purified by column chromatography (silica mesh 100-200 at eluent of 40-50% ethyl acetate and hexane) to give tert-butyl 4-((6-(2-allyl- 6-((1-methyl-1H-indazol-5-yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1- yl)pyridin-2-yl)oxy)azepane-1-carboxylate (1.2 g, 1.962 mmol, 23.23 % yield) as an off- white solid. This racemate was separated by chiral SFC (I-CELLULOSE-Z, 0.5% IPAm in ACN-IPA-60-40, Oven Temperature: 40, Column Position: 4, BPR Pressure: 102.0 kg/cm
2) to give the two enantiomers: [1058] First eluting enantiomer: rel-tert-butyl (R)-4-((6-(2-allyl-6-((1-methyl-1H-indazol-5- yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)azepane-1- carboxylate. [1059] Second eluting enantiomer rel-tert-butyl (S)-4-((6-(2-allyl-6-((1-methyl-1H-indazol-5- yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)azepane-1- carboxylate. [1060] rel-(R)-2-allyl-1-(6-(azepan-4-yloxy)pyridin-2-yl)-6-((1-methyl-1H-indazol-5- yl)amino)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1061] To a stirred solution of rel-tert-butyl (R)-4-((6-(2-allyl-6-((1-methyl-1H-indazol-5- yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)azepane-1- carboxylate (first eluting enantiomer, 300 mg, 0.490 mmol) in dioxane (5 ml) was added 4M HCl in dioxane (0.2 mL, 0.82 mmol) at 0 °C under inert atmosphere. The mixture was stirred for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, solvent was evaporated under reduced pressure to give rel-(R)-2-allyl-1-(6- (azepan-4-yloxy)pyridin-2-yl)-6-((1-methyl-1H-indazol-5-yl)amino)-1,2-dihydro-3H-
pyrazolo[3,4-d]pyrimidin-3-one (200 mg, 0.391 mmol, 95.6 % yield) as off-white solid. 30 mg of the above compound was taken and purified by prep HPLC (Column: X-SELECT CSH C18, Mobile phase A: Water (with 10 mM ABC), Mobile phase B: acetonitrile, Flow rate- 15.0 mL/Min, Rt-10.8) to give the pure compound (14.71 mg). Chiral HPLC: 100.00 %, tR = 5.27 min. [1062] Preparation of rel-(R)-2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(6-((1- methylazepan-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1063] To a stirred solution of rel-(R)-2-allyl-1-(6-(azepan-4-yloxy)pyridin-2-yl)-6-((1- methyl-1H-indazol-5-yl)amino)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (230 mg, 0.450 mmol) in THF (3 ml) was added 37% formaldehyde (0.2 mL, 2.248 mmol) followed by the addition of STAB (286 mg, 1.349 mmol) at rt. The mixture was stirred for 1 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was quenched with NH3 in MeOH followed by TFA at rt. The mixture was diluted with water and extracted with 10% MeOH in DCM (2 X 50 mL). The combined organic layers were dried over anhydrous Na2SO4. The solvent was evaporated under reduced pressure to give the crude compound which was purified by prep HPLC (Column: X-select CSH C18, Mobile phase A: Water (with 0.1% AA), Mobile phase B: acetonitrile, Flow rate- 15.0 mL/Min, Rt-12.8) to give rel-(R)-2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(6-((1- methylazepan-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (37.34 mg, 0.071 mmol, 15.80 % yield) as a white solid. Chiral HPLC: 96.81 %, tR = 5.50 min. [1064] Preparation of rel-(S)-2-allyl-1-(6-(azepan-4-yloxy)pyridin-2-yl)-6-((1-methyl-1H- indazol-5-yl)amino)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1065] To a stirred solution of rel-tert-butyl (S)-4-((6-(2-allyl-6-((1-methyl-1H-indazol-5- yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)azepane-1- carboxylate (Second eluting enantiomer, 350 mg, 0.572 mmol) in dioxane (5 ml) was added 4M HCl in dioxane (0.15 mL, 0.572 mmol) at 0 °C under inert atmosphere. The mixture was stirred for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the solvent was evaporated under reduced pressure to give rel-(S)- 2-allyl-1-(6-(azepan-4-yloxy)pyridin-2-yl)-6-((1-methyl-1H-indazol-5-yl)amino)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (260 mg, 0.508 mmol, 89.00 % yield) as off- white solid. 30 mg of the above compound was taken and purified by prep HPLC (Column: X-SELECT CSH C18, Mobile phase A: Water (with 10 MM ABC), Mobile phase B: acetonitrile, Flow rate-15.0 mL/Min, Rt-10.8) to give the pure compound (12.11 mg). Chiral HPLC: 100.00 %, tR = 5.64 min.
[1066] rel-(S)-2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(6-((1-methylazepan-4- yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1067] To a stirred solution of rel-(S)-2-allyl-1-(6-(azepan-4-yloxy)pyridin-2-yl)-6-((1- methyl-1H-indazol-5-yl)amino)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (345 mg, 0.674 mmol) in THF (5 ml) was added 37% formaldehyde (0.4 mL, 3.37 mmol) followed by the addition of STAB (429 mg, 2.023 mmol). The mixture was stirred at rt for 1 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was quenched with methanolic ammonia 2 molar solution, followed by TFA at rt. The mixture was diluted with water and extracted with 10% MeOH in DCM (2 X 50 mL). The combined organic layers were dried over anhydrous Na
2SO
4. The solvent was evaporated under reduced pressure to give the crude compound which was purified by prep HPLC (Column: X-select CSH C18, Mobile phase A: Water (with 0.1% AA), Mobile phase B: acetonitrile, Flow rate-15.0 mL/Min, Rt-12.8) to give rel-(S)-2-allyl-6-((1-methyl-1H- indazol-5-yl)amino)-1-(6-((1-methylazepan-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one (103.24 mg, 0.196 mmol, 29.1 % yield) as a white solid. Chiral HPLC: 95.17 %, tR = 6.31 min. [1068] Example 244. Synthesis of 2-allyl-6-((1-methyl-1H-indazol-6-yl)amino)-1-(6-((1- methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 359) [1069] tert-butyl 4-((6-(2-allyl-6-((1-methyl-1H-indazol-6-yl)amino)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [1070] To a solution of tert-butyl 4-((6-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (800 mg, 1.508 mmol) in AcOH (5 ml), was added 1-methyl-1H-indazol-6-amine (244 mg, 1.658 mmol) at rt under inert atmosphere. The mixture was stirred at rt for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was distilled, and residual solvent was neutralized with aq. NaHCO3 (50 mL) and the mixture was extracted with DCM (2 X 250 mL). The combined organic layers were washed with brine solution (50 ml) and dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to give the crude compound which was purified by flash column chromatography (silica gel, 100-200 mesh size: ethyl acetate in hexane 60-80%) to give tert- butyl 4-((6-(2-allyl-6-((1-methyl-1H-indazol-6-yl)amino)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (700 mg, 0.972 mmol, 64.5 % yield) as an off-white solid.
[1071] 2-allyl-6-((1-methyl-1H-indazol-6-yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)- 1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1072] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-((1-methyl-1H-indazol-6-yl)amino)- 3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1- carboxylate (860 mg, 1.439 mmol) in 1,4-dioxane (5 ml) was added 4M HCl in dioxane (0.4 mL, 1.439 mmol) at 0 °C under inert atmosphere. Then, the resulting reaction mixture was stirred at room temperature for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was concentrated under reduced pressure. The crude residue was washed and titrated with n-hexane (40 mL) to give 2-allyl-6-((1-methyl-1H-indazol-6-yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (700 mg, 1.408 mmol, 97 % yield) as an off- white solid. 50 mg of the above compound was taken and purified by prep HPLC (Column: X-select CSH C18, Mobile Phase A: Ammonium acetate in water, Mobile Phase B: acetonitrile, Flowrate:15.0mL/Min, Rt-10.8) to give the pure compound (21.86 mg). [1073] 2-allyl-6-((1-methyl-1H-indazol-6-yl)amino)-1-(6-((1-methylpiperidin-4- yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1074] To a stirred solution of 2-allyl-6-((1-methyl-1H-indazol-6-yl)amino)-1-(6-(piperidin- 4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (700mg, 1.407 mmol) in THF (5 ml) was added 37% formaldehyde (0.7 mL, 7.03 mmol), followed by the addition of STAB (895 mg, 4.22 mmol) portion wise. The reaction mixture was stirred at 25 °C for 2 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was quenched with NH3 in MeOH followed by TFA at rt. The mixture was diluted with water and extracted with 10% MeOH in DCM (2 X 100 mL). The combined organic layers was dried over anhydrous Na2SO4. Solvent was evaporated under reduced pressure to give the crude compound which was purified by prep HPLC (Column: X- select CSH C18, Mobile Phase A: Ammonium acetate in water, Mobile Phase B: acetonitrile, Flowrate:15.0mL/Min, Rt-10.8) to give 2-allyl-6-((1-methyl-1H-indazol-6- yl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (96 mg, 0.187 mmol, 13.3 % yield) as an off-white solid. [1075] Example 245. Synthesis of 2‐ethyl‐6‐[(1‐methyl‐1H‐indazol‐5‐yl)amino]‐1‐{6‐[(1‐ methylpiperidin‐4‐yl)oxy]pyridin‐2‐yl}‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidine‐3‐thione (Compound 362) [1076] A stirred suspension of 2‐ethyl‐6‐[(1‐methyl‐1H‐indazol‐5‐yl)amino]‐1‐{6‐[(1‐ methylpiperidin‐4‐yl)oxy]pyridin‐2‐yl}‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one (100 mg,
0.20 mmol, 1.0 equiv.) and phosphorous pentasulfide (133 mg, 0.30 mmol, 1.5 equiv.) in pyridine (2.5 ml) was heated at 100°C in a closed vial for 7 h. The resulting yellow solution was diluted with DCM (30 ml) and filtered through a pad of silica, eluted with 1:1 MeOH:EtOAc containing 2.5% NH
3 aq. (conc.), then partitioned between DCM (30 ml) and water (2x30 ml, pH 11), washed with sat. brine and concentrated. The crude material was purified by prep-HPLC, converted to the free base by solid-phase extraction (1 g SCX-2, MeOH, 1.4M NH3 in MeOH) and concentrated to give the title compound (54 mg, 52%) as a yellow powder. [1077] Example 246. Synthesis of 2-allyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-6- [m-(3-pyridyl)phenylamino]-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 368) [1078] This compound was made using a similar method as described in the synthesis of 2- ethyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-6-[m-(5-pyrimidinyl)phenylamino]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one. Yield 109.7 mg. [1079] Example 247. Synthesis of 4-(p-{2-allyl-1-[6-(1-methyl-4-piperidyloxy)-2- pyridyl]-3-oxo-1,2-dihydro-3H-1,2,5,7-tetraazainden-6-ylamino}phenyl)-1λ⁶,4- thiazinane-1,1-dione (Compound 369) [1080] m-chlorobenzeneperoxycarboxylic acid (83.1 mg, 1.2 eq., 481 µmol) was dissolved in dry DCM (2 ml) at RT and added to a stirred solution of tert-butyl 4-((6-(2-allyl-6- (methylthio)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2- yl)oxy)piperidine-1-carboxylate (0.2 g, 401 µmol) in 6 ml Toluene. The mixture stirred at RT 1 h. DIPEA (210 µL, 3 eq., 1.2 mmol) was added and followed by p-(1,1-dioxo-1λ⁶,4- thiazinan-4-yl)aniline (90.8 mg, 401 µmol). The mixture was stirred at 60 °C and then allowed to cool to RT. The reaction was quenched with 1M NaOH (5 mL) which was added dropwise. The mixture was extracted with ethyl acetate (3x20 mL). The organic phase was washed with brine (20 mL). The combined organic layers were poured through a phase separator and concentrated under reduced pressure to give the product as a yellow powder (180 mg). Deprotection and reductive methylation of the resulting material was performed as described in the synthesis of 2-allyl-6-((4-chlorophenyl)amino)-1-(6-((1-methylpiperidin-4- yl)amino)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one. Yield 141 mg. [1081] Example 248. Synthesis of 2-allyl-1-(2-((1-(oxetan-3-yl)piperidin-4- yl)oxy)pyrimidin-4-yl)-6-((4-(2,2,2-trifluoroethoxy)phenyl)amino)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one (Compound 371) [1082] To a solution of 2-allyl-1-(2-(piperidin-4-yloxy)pyrimidin-4-yl)-6-((4-(2,2,2-
trifluoroethoxy)phenyl)amino)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (400 mg, 0.737 mmol) in 1,2-Dichloroethane (10 ml) was added oxetan-3-one (106 mg, 1.475 mmol) and stirred at 60 °C for 1 h. The mixture was cooled to rt and STAB (469 mg, 2.212 mmol) was added. The resulting reaction mixture was stirred for 3 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was quenched with ice cold water (100 mL) and extracted with 10% MeOH-DCM (2 X 100 mL). The combined organic layers was dried over anhydrous Na2SO4, evaporated under reduced pressure to give the crude compound which was purified by Prep HPLC (X Select C- 8, 19 X 250, Mobile phase A: 10mm ABC in Water, Mobile phase B: acetonitrile) to give 2- allyl-1-(2-((1-(oxetan-3-yl)piperidin-4-yl)oxy)pyrimidin-4-yl)-6-((4-(2,2,2- trifluoroethoxy)phenyl)amino)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (73 mg, 0.112 mmol, 15.14 % yield) as an off-white solid. [1083] Example 249. Synthesis of 2-allyl-6-((1-isopropyl-1H-indazol-5-yl)amino)-1-(2- (piperidin-4-yloxy)pyrimidin-4-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 375) and 2-allyl-6-((1-isopropyl-1H-indazol-5-yl)amino)-1-(2-((1- methylpiperidin-4-yl)oxy)pyrimidin-4-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3- one (Compound 401) [1084] 1-isopropyl-5-nitro-1H-indazole [1085] To a stirred solution of 5-nitro-1H-indazole (1 g, 6.13 mmol) in DMF (10 ml), was added DBU (1.109 ml, 7.36 mmol) and 2-iodopropane (0.736 ml, 7.36 mmol) at 0 °C. The resulting reaction mixture was stirred at rt for 3 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was quenched with water (100 mL) and extracted with ethyl acetate (2 X 100 mL) to give crude material which was purified by column chromatography (SiO2/230-400 mesh; 30-50% ethyl acetate in hexane) to give 1-isopropyl-5-nitro-1H-indazole (700 mg, 3.41 mmol, 55.6 % yield) as an off-white solid. This compound structure was also confirmed by 1D NOE. [1086] 1-isopropyl-1H-indazol-5-amine [1087] To a degassed solution of 1-isopropyl-5-nitro-1H-indazole (600 mg, 2.92 mmol) in methanol (20 ml) was added 10% Pd/C (311 mg, 0.292 mmol) under nitrogen atmosphere. The reaction mixture was stirred under a hydrogen atmosphere using hydrogen bladder pressure at room temperature for 16 h. The progress of the reaction was monitored by TLC and UPLC. After completion of the reaction, the reaction mixture was filtered under a nitrogen atmosphere through celite and washed with methanol (2 X 100 mL). The filtrate was concentrated under reduced pressure to give 1-isopropyl-1H-indazol-5-amine (500 mg, 2.85
mmol, 98 % yield) as a black gummy solid, which was taken into the next step without further purification. [1088] tert-butyl 4-((4-(2-allyl-6-((1-isopropyl-1H-indazol-5-yl)amino)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyrimidin-2-yl)oxy)piperidine-1-carboxylate [1089] To a stirred solution of tert-butyl 4-((4-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyrimidin-2-yl)oxy)piperidine-1-carboxylate (500 mg, 0.941 mmol) in AcOH (10 ml) was added 1-isopropyl-1H-indazol-5-amine (247 mg, 1.411 mmol) at room temperature. The reaction mixture was stirred at 25 °C for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the solvent was evaporated under reduced pressure, and then the reaction mixture was quenched with aq. NaHCO3 (50 mL) at 0 °C and extracted with 10% methanol in DCM (2 X 50 mL). The combined organic layers was dried over Na2SO4, filtered, and concentrated under reduced pressure to give tert-butyl 4-((4-(2-allyl-6-((1-isopropyl-1H-indazol-5-yl)amino)-3- oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyrimidin-2-yl)oxy)piperidine-1- carboxylate (500 mg, 0.798 mmol, 85 % yield) as a brown gummy solid. [1090] 2-allyl-6-((1-isopropyl-1H-indazol-5-yl)amino)-1-(2-(piperidin-4-yloxy)pyrimidin-4- yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1091] To a stirred solution of tert-butyl 4-((4-(2-allyl-6-((1-isopropyl-1H-indazol-5- yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyrimidin-2- yl)oxy)piperidine-1-carboxylate (600 mg, 0.798 mmol) in DCM (15 ml) was added TFA (0.916 ml, 11.97 mmol) at 0 °C under inert atmosphere. Then, the resulting reaction mixture was stirred at room temperature for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the solvent was evaporated under reduced pressure, and the solid was collected. This solid was washed with n-hexane to give the compound 2-allyl-6-((1-isopropyl-1H-indazol-5-yl)amino)-1-(2-(piperidin-4- yloxy)pyrimidin-4-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (400 mg, 0.471 mmol, 59.0 % yield) as a brown solid.50 mg of the above compound was taken and purified by Prep HPLC (X Select C18, 19 X 250), Mobile phase A: 0.1% FA in H
2O, Mobile phase B: acetonitrile) to give the pure compound (22.23 mg). [1092] 2-allyl-6-((1-isopropyl-1H-indazol-5-yl)amino)-1-(2-((1-methylpiperidin-4- yl)oxy)pyrimidin-4-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1093] To a stirred solution of 2-allyl-6-((1-isopropyl-1H-indazol-5-yl)amino)-1-(2- (piperidin-4-yloxy)pyrimidin-4-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (300 mg, 0.570 mmol) in THF (5 ml) was added 37% formaldehyde (0.240 ml, 1.946 mmol), followed
by the addition of STAB (362 mg, 1.709 mmol) at rt. The mixture was stirred for 2 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was quenched with NH3 in MeOH followed by TFA at rt and water. The mixture was extracted with 10% MeOH in DCM (2 X 100 mL). The combined organic layers was dried over anhydrous Na2SO4 and evaporated under reduced pressure to give the crude compound which was purified by prep HPLC (X Select C18, 19 X 250), Mobile phase A: 0.1% FA in H
2O, Mobile phase B: acetonitrile) to give the pure compound 2-allyl-6-((1- isopropyl-1H-indazol-5-yl)amino)-1-(2-((1-methylpiperidin-4-yl)oxy)pyrimidin-4-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (15 mg, 0.027 mmol, 4.73 % yield) as off white solid. [1094] Example 250. Synthesis of 2-allyl-6-((1-cyclopropyl-1H-indazol-5-yl)amino)-1-(6- (piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 376) and 2-allyl-6-((1-cyclopropyl-1H-indazol-5-yl)amino)-1-(6-((1- methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 386) [1095] 1-cyclopropyl-5-nitro-1H-indazole [1096] To a stirred solution of 5-nitro-1H-indazole (1.5 g, 9.19 mmol) in DCE (50 ml) were added sodium carbonate (1.949 g, 18.39 mmol), cyclopropylboronic acid (1.580 g, 18.39 mmol), 2-(2-pyridyl)pyridine (1.436 g, 9.19 mmol) and copper (II) acetate (1.670 g, 9.19 mmol). The resulting reaction mixture was stirred at 70 °C for 3 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was quenched with water (100 mL) and extracted with ethyl acetate (2 X 100 mL). The combined organic layers were dried over anhydrous Na
2SO
4, filtered, and evaporated under reduced pressure to give crude compound which was purified by column chromatography (SiO
2/100-200 mesh; 40-50% ethyl acetate-hexane) to give 1-cyclopropyl-5- nitro-1H-indazole (3, 700 mg, 3.44 mmol, 37.5 % yield). [1097] 1-cyclopropyl-1H-indazol-5-amine [1098] To a stirred solution of 1-cyclopropyl-5-nitro-1H-indazole (1 g, 4.92 mmol) in methanol (20 ml) was added 10% Pd/C (0.524 g, 0.492 mmol) under nitrogen atmosphere. The reaction mixture was stirred under H
2 bladder pressure at room temperature for 16 h. The progress of the reaction was monitored by TLC and UPLC. After completion of the reaction, the reaction mixture was filtered through a pad of celite and washed with methanol (2 X 100 mL). The filtrate was concentrated under reduced pressure to give 1-cyclopropyl-1H-indazol- 5-amine (700 mg, 4.04 mmol, 82 % yield) as a black gummy solid, which was taken into the
next step without further purification. [1099] tert-butyl 4-((6-(2-allyl-6-((1-cyclopropyl-1H-indazol-5-yl)amino)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [1100] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (500 mg, 0.942 mmol) in AcOH (10 ml) was added 1-cyclopropyl-1H-indazol-5-amine (163 mg, 0.942 mmol) at room temperature. The reaction mixture was stirred at 25 °C for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the solvent was evaporated under reduced pressure and the residue was quenched with aq. NaHCO
3 (100 mL) at 0 °C and extracted with 10% MeOH-DCM (2 X 50 mL). The combined organic layers was dried over Na2SO4, filtered, and concentrated under reduced pressure to give tert-butyl 4-((6-(2-allyl-6-((1-cyclopropyl-1H-indazol-5-yl)amino)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (500 mg, 0.802 mmol, 85 % yield) as a brown gummy solid. [1101] 2-allyl-6-((1-cyclopropyl-1H-indazol-5-yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2- yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1102] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-((1-cyclopropyl-1H-indazol-5- yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine- 1-carboxylate (700 mg, 1.122 mmol) in DCM (15 ml) was added TFA (0.7 ml, 8.98 mmol) at 0 °C under inert atmosphere. The resulting reaction mixture was stirred at room temperature for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was concentrated under reduced pressure. The crude residue was triturated with n-hexane (10 mL) to give 2-allyl-6-((1-cyclopropyl-1H-indazol-5- yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3- one (500 mg, 0.955 mmol, 85 % yield) as an off-white solid.50 mg of the above compound was taken and purified by prep HPLC (Column: X-select CSH C18, Mobile Phase A: 0.1% FA in H
2O, Mobile Phase B: acetonitrile, Flowrate:15.0mL/Min, Rt-10.8) to give the pure compound (6.87 mg). [1103] 2-allyl-6-((1-cyclopropyl-1H-indazol-5-yl)amino)-1-(6-((1-methylpiperidin-4- yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1104] To a stirred solution of 2-allyl-6-((1-cyclopropyl-1H-indazol-5-yl)amino)-1-(6- (piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (350 mg, 0.668 mmol) in THF (5 ml) was added 37% formaldehyde (0.184 ml, 6.68 mmol), followed by the addition of STAB (425 mg, 2.005 mmol) at 0 °C. The resulting reaction mixture was
stirred at room temperature for 1 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was quenched with NH3 in MeOH followed by TFA at rt. The mixture was diluted with water and extracted with 10% MeOH in DCM (2 X 100 mL). The combined organic layers were dried over anhydrous Na2SO4 and evaporated under reduced pressure to give the crude compound, which was purified by prep HPLC (Shim pack C18, 250mm X 20, Mobile phase A: 10mm AA in Water, Mobile phase B: acetonitrile, Flow:15 mL) to give 2-allyl-6-((1-cyclopropyl-1H-indazol-5- yl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (100 mg, 0.186 mmol, 27.8 % yield) as an off-white solid. [1105] Example 251. Synthesis of 2-allyl-6-((4-(3-fluoropropoxy)phenyl)amino)-1-(6-((1- methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 377) and 2-allyl-6-((4-(3-fluoropropoxy)phenyl)amino)-1-(6-(piperidin-4- yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 378) [1106] (1-(3-fluoropropoxy)-4-nitrobenzene [1107] To a stirred solution of 4-nitrophenol (1 g, 7.19 mmol) in DMF (10 mL) was added potassium carbonate (0.993 g, 7.19 mmol) at 0 °C and the mixture was stirred for 1 h at room temperature. Then 1-fluoro-3-iodopropane (1.061 ml, 10.78 mmol) was added to the reaction mixture under an argon atmosphere. The resulting reaction mixture was stirred at 25 °C for 16 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was concentrated under reduced pressure. The resulting crude material was purified by flash chromatography (SiO
2/230-400 mesh; ~50-80% EtOAc/hexane) to afford 1-(3-fluoropropoxy)-4-nitrobenzene (1.5 g, 5.50 mmol, 76 % yield) as a yellow solid. [1108] 4-(3-fluoropropoxy)aniline [1109] To a degassed solution of 1-(3-fluoropropoxy)-4-nitrobenzene (1.5 g, 7.53 mmol) in MeOH (20 ml) was added Pd-C (10%, 217 mg, 2.039 mmol) under inert atmosphere. The reaction mixture was stirred under a hydrogen atmosphere using hydrogen bladder pressure at room temperature for 16 h. The progress of the reaction was monitored by TLC and UPLC. After completion of the reaction, the reaction mixture was filtered under a nitrogen atmosphere through a pad of celite and washed with MeOH (2 X 100 mL). The filtrate was concentrated under reduced pressure to give 4-(3-fluoropropoxy)aniline (630 mg, 3.7 mmol) as a brown gummy solid, which was taken into the next step without further purification. [1110] tert-butyl 4-((6-(2-allyl-6-((4-(3-fluoropropoxy)phenyl)amino)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [1111] To a stirred solution tert-butyl 4-((6-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro-
1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (600 mg, 1.131 mmol) in acetonitrile (5 mL) was added 4-(3-fluoropropoxy)aniline (210 mg, 1.244 mmol) at room temperature. The reaction mixture was subjected to stirring at 70 °C for 16 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was diluted with water and extracted with 10% methanol-DCM (50 mL x 2). The combined organic layer was dried over Na
2SO
4, filtered, and concentrated under reduced pressure. The crude material was purified by flash column chromatography (silica gel, 100- 200 mesh size) using methanol-DCM (15-20%) as an eluent to obtain tert-butyl 4-((6-(2- allyl-6-((4-(3-fluoropropoxy)phenyl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (510 mg, 0.757 mmol, 67.0 % yield) as a brown solid. [1112] 2-allyl-6-((4-(3-fluoropropoxy)phenyl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)- 1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1113] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-((4-(3- fluoropropoxy)phenyl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin- 2-yl)oxy)piperidine-1-carboxylate (510 mg, 0.823 mmol) in 1,4-dioxane (5 mL), was added 4M HCl in 1,4-dioxane (2.0 mL) at 0 °C. The reaction mixture was stirred at room temperature for 4 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was concentrated under reduced pressure. The crude residue (70 mg) was purified by prep. HPLC X-Select C18 (19*250, 5mL), Mobile phase A: 0.1 M FA in H
2O, Mobile phase B: acetonitrile) to get 2-allyl-6-((4-(3- fluoropropoxy)phenyl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one (70 mg, 0.111 mmol, 72% Yield) as an off white-solid. [1114] 2-allyl-6-((4-(3-fluoropropoxy)phenyl)amino)-1-(6-((1-methylpiperidin-4- yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1115] To a stirred solution of 2-allyl-6-((4-(3-fluoropropoxy)phenyl)amino)-1-(6-(piperidin- 4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (400 mg, 0.770 mmol) in THF (10 mL) was added 20% aq. formaldehyde (8 ml) at 25 °C. The reaction mixture was stirred at 25 °C for 5 min. Then, STAB (575 mg, 2.71 mmol) was added portion-wise. After the complete addition of STAB, the reaction mixture was stirred at 25 °C for 20 min. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was quenched with TFA, followed by NH
3 in MeOH, diluted with water and extracted with 10% MeOH in DCM (2 X 100 mL). The combined organic extracts were washed with NaHCO
3, dried over anhydrous Na
2SO
4, filtered, and concentrated under
reduced pressure to afford crude compound that was purified by prep. HPLC ZORBAX (30 MM), Mobile phase A: 10 MM ABC in H
2O, Mobile phase B: acetonitrile) to give 2-allyl-6- ((4-(3-fluoropropoxy)phenyl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (71.57 mg, 0.133 mmol, 17.25 % yield)as an off-white solid. [1116] Example 252. Synthesis of rel-2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(6- (((2R,4R)-2-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (Compound 404); rel-2-allyl-1-(6-(((2R,4R)-1,2-dimethylpiperidin-4- yl)oxy)pyridin-2-yl)-6-((1-methyl-1H-indazol-5-yl)amino)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (Compound 402); rel-2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1- (6-(((2R,4S)-2-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (Compound 405); rel-2-allyl-1-(6-(((2R,4S)-1,2-dimethylpiperidin-4- yl)oxy)pyridin-2-yl)-6-((1-methyl-1H-indazol-5-yl)amino)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (Compound 403); 2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(6- (((2R,4S)-2-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (Compound 379); rel-2-allyl-1-(6-(((2R,4S)-1,2-dimethylpiperidin-4- yl)oxy)pyridin-2-yl)-6-((1-methyl-1H-indazol-5-yl)amino)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (Compound 380); 2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(6- (((2R,4R)-2-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (Compound 381); and 2-allyl-1-(6-(((2R,4R)-1,2-dimethylpiperidin-4- yl)oxy)pyridin-2-yl)-6-((1-methyl-1H-indazol-5-yl)amino)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (Compound 382) [1117] tert-butyl 4-hydroxy-2-methylpiperidine-1-carboxylate [1118] To a stirred solution of tert-butyl 2-methyl-4-oxopiperidine-1-carboxylate (3 g, 14.07 mmol) in MeOH (50 mL) was added sodium borohydride (1.064 g, 28.1 mmol) at 0 °C, the reaction was allowed to stir at 25 °C for 16 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was diluted with water and extracted with ethyl acetate (100 mL x 2). The combined organic layer was dried over Na2SO4, filtered, and concentrated under reduced pressure to afford tert-butyl 4-hydroxy-2- methylpiperidine-1-carboxylate (3 g, 13.93 mmol) as a colourless liquid. [1119] tert-butyl 4-((6-bromopyridin-2-yl)oxy)-2-methylpiperidine-1-carboxylate [1120] To a stirred solution of tert-butyl 4-hydroxy-2-methylpiperidine-1-carboxylate (3 g, 13.93 mmol) in THF (10 ml) was added sodium hydride (60% in oil, 0.669 g, 16.72 mmol). After 10 min at 25 °C, was added 2,6-dibromopyridine (3.14 g, 13.24 mmol) at 0 °C. The
reaction was allowed to stir at 25 °C for 2 h. The progress of the reaction was monitored by TLC and UPLC. After completion of the reaction, ice water was added, and the product was extracted with ethyl acetate. The combined organic layer was washed with brine, dried over anhydrous sodium sulfate, and concentrated under reduced pressure. The resulting crude material was purified by flash chromatography (SiO2/100-200 mesh; 10-20% ethyl acetate/hexane) to afford tert-butyl 4-((6-bromopyridin-2-yl)oxy)-2-methylpiperidine-1- carboxylate (4 g, 9.37 mmol, 67.3 % yield) as an off-white solid. [1121] tert-butyl 4-((6-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2-methylpiperidine-1-carboxylate [1122] A stirred solution of tert-butyl 4-((6-bromopyridin-2-yl)oxy)-2-methylpiperidine-1- carboxylate (2 g, 5.39 mmol), 2-allyl-6-(methylthio)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (1.437 g, 6.46 mmol), potassium carbonate (2.233 g, 16.16 mmol) and N,N’-dimethylethane-1,2-diamine (0.475 g, 5.39 mmol) in dioxane (30 ml) was degassed for 20 min at rt under inert atmosphere. Then was added copper(I) iodide (1.231 g, 6.46 mmol) and the mixture was stirred at 100 °C for 16 h. The progress of the reaction was monitored by UPLC. After completion of the reaction, the reaction mass was diluted with DCM and filtered through celite pad. The collected filtrate was concentrated under reduced pressure. The crude material was purified by flash column chromatography (silica gel, 100-200 mesh size) using ethyl acetate-petroleum ether (10% - 20%) as an eluent to obtain tert-butyl 4-((6-(2-allyl-6- (methylthio)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2- methylpiperidine-1-carboxylate (2.2 g, 4.25 mmol, 79 % yield) off white solid. [1123] tert-butyl (4S)-4-((6-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2-methylpiperidine-1-carboxylate; tert-butyl (2S,4R)-4- ((6-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2- yl)oxy)-2-methylpiperidine-1-carboxylate; and tert-butyl (2R,4R)-4-((6-(2-allyl-6- (methylthio)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2- methylpiperidine-1-carboxylate [1124] The tert-butyl (4S)-4-((6-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2-methylpiperidine-1-carboxylate (6, 6.6 g) enantiomers were separated by chiral SFC (I-CELLULOSE-C_0.5% IPAm in IPA_30). Fractions were concentrated and lyophilized to give: • tert-butyl (4S)-4-((6-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2-methylpiperidine-1-carboxylate (1.65 g) as an off white solid;
• tert-butyl (2S,4R)-4-((6-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2-methylpiperidine-1-carboxylate (1 g) as an off white solid; and • tert-butyl (2R,4R)-4-((6-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2-methylpiperidine-1-carboxylate (1.4 g) as an off white solid. [1125] tert-butyl 4-((6-(2-allyl-6-(methylsulfinyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2-methylpiperidine-1-carboxylate [1126] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2-methylpiperidine-1-carboxylate (400 mg, 0.780 mmol) in DCM (10 ml), mCPBA (65-70%, 148 mg, 0.858 mmol) was added at 0 °C and the mixture was stirred at RT for 2 h. The progress of the reaction was monitored by TLC and UPLC. After completion of the reaction, the reaction mixture was quenched with saturated sodium thiosulphate pentahydrate (100 mL) and extracted with DCM (250 mL X 2). The combined organic extract was washed with saturated aqueous sodium bicarbonate solution (100 mL). The organic extract obtained was dried over anhydrous sodium sulfate, filtered, and concentrated under reduced pressure (bath temperature: 45 °C) to afford crude tert-butyl 4-((6-(2-allyl-6-(methylsulfinyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin- 1-yl)pyridin-2-yl)oxy)-2-methylpiperidine-1-carboxylate (400 mg, 0.643 mmol, 82 % yield) as sticky solid. [1127] tert-butyl 4-((6-(2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2-methylpiperidine-1-carboxylate [1128] To a stirred solution tert-butyl 4-((6-(2-allyl-6-(methylsulfinyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2-methylpiperidine-1-carboxylate (1.65 g, 3.12 mmol) in acetonitrile (15 mL) was added 1-methyl-1H-indazol-5-amine (0.551 g, 3.75 mmol) at room temperature. The reaction mixture was subjected to stirring at 70 °C for 16 h. The progress of the reaction was monitored by TLC. After the completion of the reaction, the reaction mixture was concentrated under reduced pressure. The crude product (1.8 g) was purified by achiral SFC purification. Fractions were concentrated and lyophilized to obtain tert-butyl (2R,4R)-4-((6-(2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2-methylpiperidine-1-carboxylate (1.1 g, 1.798 mmol, 57.6 % yield) as a reddish brown solid. [1129] tert-butyl (2R,4R)-4-((6-(2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-3-oxo-2,3-
dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2-methylpiperidine-1- carboxylate and tert-butyl (2R,4R)-4-((6-(2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-3-oxo- 2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2-methylpiperidine-1- carboxylate [1130] The tert-butyl (4R)-4-((6-(2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-3-oxo-2,3- dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2-methylpiperidine-1- carboxylate (1.1 g, 1.798 mmol) was purified by chiral SFC (Lux-i-Amylose-3, 0.5% IPAm in IPA_ACN) to obtain: • tert-butyl (2R,4R)-4-((6-(2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-3-oxo-2,3- dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2-methylpiperidine-1- carboxylate (350 mg, 0.566 mmol, 31.5 % yield) as a yellow solid; and • tert-butyl (2S,4R)-4-((6-(2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-3-oxo-2,3- dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2-methylpiperidine-1- carboxylate (360 mg, 0.559 mmol, 31.1 % yield) as a brown solid. [1131] rel-2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(6-(((2R,4R)-2-methylpiperidin-4- yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1132] To a stirred solution of tert-butyl (2R,4R)-4-((6-(2-allyl-6-((1-methyl-1H-indazol-5- yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2- methylpiperidine-1-carboxylate (360 mg, 0.589 mmol) in 1,4-dioxane (10 mL), was added 4M HCl in 1,4-dioxane (5.0 mL) at 0 °C. The resulting reaction mixture was stirred at room temperature for 4 h. The progress of the reaction was monitored by TLC. After the completion of the reaction, the reaction mixture was concentrated under reduced pressure. The crude material was washed with hexane and MTBE. The residue obtained was then dried under vacuum to give rel-2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(6-(((2R,4R)-2- methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (290 mg, 0.561 mmol, 95 % yield) as a yellow solid (82.1 mg). [1133] rel-2-allyl-1-(6-(((2R,4R)-1,2-dimethylpiperidin-4-yl)oxy)pyridin-2-yl)-6-((1-methyl- 1H-indazol-5-yl)amino)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1134] To a stirred solution of rel-2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(6- (((2R,4R)-2-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (250 mg, 0.782 mmol) in THF (10 mL) was added formaldehyde (37% aq., 5 mL) at 25 °C. The reaction mixture was stirred at 25 °C for 5 min. Then sodium triacetoxyborohydride (331 mg, 1.564 mmol) was added portion-wise. After the complete
addition of STAB, the reaction mixture was stirred at 25 °C for 20 min. The progress of the reaction was monitored by TLC and LCMS. The reaction mixture was quenched with TFA, followed by NH3 in MeOH, then diluted with water and extracted with 10% MeOH in DCM (2 X 100 mL). The combined organic extract was washed with NaHCO
3, dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure to afford crude compound which was purified by prep. HPLC X-Select C18 (19*250, 5mL), Mobile phase A: 10 MM AA in H
2O, Mobile phase B: acetonitrile) to give rel-2-allyl-1-(6-(((2R,4R)-1,2- dimethylpiperidin-4-yl)oxy)pyridin-2-yl)-6-((1-methyl-1H-indazol-5-yl)amino)-1,2-dihydro- 3H-pyrazolo[3,4-d]pyrimidin-3-one (139.5 mg, 0.263 mmol, 33.6 % yield) as a white fluffy solid. [1135] rel-2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(6-(((2R,4S)-2-methylpiperidin-4- yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1136] To a stirred solution of tert-butyl (2S,4R)-4-((6-(2-allyl-6-((1-methyl-1H-indazol-5- yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2- methylpiperidine-1-carboxylate (400 mg, 0.572 mmol) in 1,4-dioxane (10 mL), was added 4M HCl in 1,4-dioxane (5.0 mL) at 0 °C. The reaction mixture was stirred at room temperature for 4 h. The progress of the reaction was monitored by TLC. After the completion of the reaction, the reaction mixture was concentrated under reduced pressure. The crude material was washed with hexane and MTBE. The residue was then dried under vacuum to obtain rel-2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(6-(((2R,4S)-2- methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (320 mg, 0.620 mmol, 99 % yield) as a reddish brown solid. [1137] rel-2-allyl-1-(6-(((2R,4S)-1,2-dimethylpiperidin-4-yl)oxy)pyridin-2-yl)-6-((1-methyl- 1H-indazol-5-yl)amino)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1138] To a stirred solution of rel-2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(6- (((2R,4S)-2-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (300 mg, 0.586 mmol) in THF (10 mL) was added formaldehyde (37% aq., 6 mL) at 25 °C). The reaction mixture was stirred at 25 °C for 5 min. sodium triacetoxyborohydride (249 mg, 1.173 mmol) was added portion-wise. After addition, the reaction mixture was stirred at 25 °C for 20 min. The progress of the reaction was monitored by TLC and LCMS. The reaction mixture was quenched with TFA followed by NH3 in MeOH, then diluted with water and extracted with 10% MeOH in DCM (2 X 100 mL). The combined organic extract was washed with NaHCO3, dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure to afford crude compound which was purified by
prep. HPLC X-Select C18 (19*250, 5mL), Mobile phase A: 10 MM AA in H
2O, Mobile phase B: acetonitrile) to give rel-2-allyl-1-(6-(((2R,4S)-1,2-dimethylpiperidin-4- yl)oxy)pyridin-2-yl)-6-((1-methyl-1H-indazol-5-yl)amino)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (163.2 mg, 0.309 mmol, 52.7 % yield) as a white fluffy solid. [1139] tert-butyl (2S,4R)-4-((6-(2-allyl-6-(methylsulfinyl)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2-methylpiperidine-1-carboxylate [1140] To a stirred solution of tert-butyl (2R,4R)-4-((6-(2-allyl-6-(methylthio)-3-oxo-2,3- dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2-methylpiperidine-1- carboxylate (1.4 g, 2.73 mmol) in DCM (50 ml) at 0 °C, was added mCPBA (65-70%, 262 mg, 1.519 mmol) and the mixture was stirred at RT for 2 h. The progress of the reaction was monitored by TLC and UPLC. After completion of the reaction, ice water was added and the mixture was extracted with DCM (100 mL X 2). The combined organic layers was washed with aqueous sodium bicarbonate solution, dried over anhydrous sodium sulfate, and concentrated under reduced pressure to obtain tert-butyl (2R,4R)-4-((6-(2-allyl-6- (methylsulfinyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2- methylpiperidine-1-carboxylate (1.40 g, 2.03 mmol, 93 % yield) as a pale yellow semi-solid. [1141] rel-tert-butyl (2R,4S)-4-((6-(2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-3-oxo-2,3- dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2-methylpiperidine-1- carboxylate [1142] To a stirred solution rel-tert-butyl (2R,4R)-4-((6-(2-allyl-6-(methylsulfinyl)-3-oxo- 2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2-methylpiperidine-1- carboxylate (1.4 g, 2.65 mmol) in acetonitrile (30 mL) was added 1-methyl-1H-indazol-5- amine (0.429 g, 2.91 mmol) at room temperature. The reaction mixture was subjected to stirring at 70 °C for 16 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was diluted with water and extracted with 10% methanol-DCM (50 mL x 2). The combined organic layer was dried over Na2SO4, filtered, and concentrated under reduced pressure. The crude material was purified by flash column chromatography (silica gel, 100-200 mesh size) using ethyl acetate-hexane (40 % to 50%) as an eluent to obtain rel-tert-butyl(2S,4S)-4-((6-(2-allyl-6-((1-methyl-1H-indazol-5- yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2- methylpiperidine-1-carboxylate (1.03 g, 1.566 mmol, 59.1 % yield) as a brown solid. [1143] 2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(6-(((2R,4S)-2-methylpiperidin-4- yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1144] To a stirred solution of rel-tert-butyl (2S,4S)-4-((6-(2-allyl-6-((1-methyl-1H-indazol-
5-yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2- methylpiperidine-1-carboxylate (1.3 g, 2.125 mmol) in 1,4-dioxane (5 mL), was added 4M HCl in 1,4-dioxane (2.0 mL) at 0 °C. The resulting reaction mixture was stirred at room temperature for 4 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was concentrated under reduced pressure to give crude product 1100 mg). The crude residue (450 mg) was purified by prep. HPLC X-Select C18 (19*250, 5mL), Mobile phase A: 10 MM AA in H
2O, Mobile phase B: acetonitrile) to give rel-2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(6-(((2R,4R)-2-methylpiperidin-4- yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (250 mg, 0.192 mmol, 67 % yield) as an off white-solid. [1145] rel-2-allyl-1-(6-(((2R,4S)-1,2-dimethylpiperidin-4-yl)oxy)pyridin-2-yl)-6-((1-methyl- 1H-indazol-5-yl)amino)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1146] To a stirred solution of rel-2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(6- (((2R,4S)-2-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (500 mg, 0.977 mmol) in THF (10 mL) was added formaldehyde (37% aq., 5 mL, 2.93 mmol) at 25 °C. The reaction mixture was stirred at 25 °C for 5 min. sodium triacetoxyborohydride (621 mg, 2.93 mmol) was added portion-wise. The reaction mixture was stirred at 25 °C for 20 min. The progress of the reaction was monitored by TLC and LCMS. The reaction mixture was quenched with TFA, followed by NH3 in MeOH, diluted with water and extracted with 10% MeOH in DCM (2 X 100 mL). The combined organic extracts was washed with NaHCO
3, dried over anhydrous Na
2SO
4, filtered, and concentrated under reduced pressure to afford crude compound which was purified by prep. HPLC X- Select C18 (19*250, 5mL), Mobile phase A: 10 MM AA in H
2O, Mobile phase B: acetonitrile) to give rel-2-allyl-1-(6-(((2R,4S)-1,2-dimethylpiperidin-4-yl)oxy)pyridin-2-yl)- 6-((1-methyl-1H-indazol-5-yl)amino)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (265.5 mg, 0.504 mmol, 52 % yield) as an off-white solid. [1147] tert-butyl (2R,4R)-4-((6-(2-allyl-6-(methylsulfinyl)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2-methylpiperidine-1-carboxylate [1148] To a stirred solution of tert-butyl (2R,4R)-4-((6-(2-allyl-6-(methylthio)-3-oxo-2,3- dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2-methylpiperidine-1- carboxylate (1.4 g, 2.73 mmol) in DCM (5 ml) at 0 °C, was added m-CPBA (70%, 0.518 g, 3.00 mmol) and the mixture was stirred at RT for 2 h. The progress of the reaction was monitored by TLC and UPLC. After completion of the reaction, the reaction mixture was added to ice water and extracted with DCM (100 mL X 2). The combined organic layer was
washed with aqueous sodium bicarbonate solution, dried over anhydrous sodium sulfate and concentrated under reduced pressure to obtain tert-butyl (2R,4R)-4-((6-(2-allyl-6- (methylsulfinyl)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2- methylpiperidine-1-carboxylate (1.4 g, 2.65 mmol) as a pale yellow semi-solid. [1149] tert-butyl (2R,4R)-4-((6-(2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-3-oxo-2,3- dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2-methylpiperidine-1- carboxylate [1150] To a stirred solution of tert-butyl (2R,4R)-4-((6-(2-allyl-6-(methylsulfinyl)-3-oxo-2,3- dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2-methylpiperidine-1- carboxylate (1.4 g, 2.65 mmol) in acetonitrile (20 mL) was added 1-methyl-1H-indazol-5- amine (0.429 g, 2.91 mmol) at room temperature. The reaction mixture was stirred at 70 °C for 16 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was diluted with water and extracted with 10% methanol-DCM (50 mL x 2). The combined organic layer was dried over Na2SO4, filtered, and concentrated under reduced pressure. The crude material was purified by flash column chromatography (silica gel, 100-200 mesh size) using ethyl acetate-hexane (40 % to 50%) as an eluent to obtain tert-butyl (2S,4S)-4-((6-(2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-3-oxo-2,3- dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2-methylpiperidine-1- carboxylate (1.03 g, 1.566 mmol, 59.1 % yield) as a gummy oil. [1151] 2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(6-(((2R,4R)-2-methylpiperidin-4- yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1152] To a stirred solution of tert-butyl (2S,4S)-4-((6-(2-allyl-6-((1-methyl-1H-indazol-5- yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)-2- methylpiperidine-1-carboxylate (1.3 g, 2.125 mmol) in 1,4-dioxane (5 mL), was added 4M HCl in 1,4-dioxane (2.0 mL) at 0 °C. The resulting reaction mixture was stirred at room temperature for 4 h. The reaction was monitored by TLC. After completion of the reaction, the reaction mixture was concentrated under reduced pressure to afford the crude product (1100 mg). The crude residue (450 mg) was purified by prep. HPLC X-Select C18 (19*250, 5mL), Mobile phase A: 10 MM AA in H
2O, Mobile phase B: acetonitrile) to give rel-2-allyl- 6-((1-methyl-1H-indazol-5-yl)amino)-1-(6-(((2R,4R)-2-methylpiperidin-4-yl)oxy)pyridin-2- yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (234 mg, 0.364 mmol, 72 % yield) as an off white-solid. [1153] 2-allyl-1-(6-(((2R,4R)-1,2-dimethylpiperidin-4-yl)oxy)pyridin-2-yl)-6-((1-methyl-1H- indazol-5-yl)amino)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one
[1154] To a stirred solution of rel-2-allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(6- (((2R,4R)-2-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (650 mg, 1.955 mmol) in THF (10 mL) was added formaldehyde (37% aq., 10 mL) at 25 °C. The reaction mixture was stirred at 25 °C for 5 min. Then was added, sodium triacetoxyborohydride (1.243 g, 5.86 mmol) portion-wise. After the complete addition, the reaction mixture was stirred at 25 °C for 20 min. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was quenched with TFA, followed by NH
3 in MeOH, diluted with water and extracted with 10% MeOH in DCM (2 X 100 mL). The combined organic extracts were washed with NaHCO
3, dried over anhydrous Na
2SO
4, filtered, and concentrated under reduced pressure to afford crude compound that was purified by prep. HPLC X-Select C18 (19*250, 5mL), Mobile phase A: 10 MM AA in H
2O, Mobile phase B: acetonitrile) to give rel-2-allyl-1-(6- (((2R,4R)-1,2-dimethylpiperidin-4-yl)oxy)pyridin-2-yl)-6-((1-methyl-1H-indazol-5- yl)amino)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (200 mg, 0.380 mmol, 20.1 % yield) as an off-white solid. [1155] Example 253. Synthesis of Synthesis of 2-allyl-6-((1-(3-fluoropropyl)-1H-indazol- 5-yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (Compound 397) and 2-allyl-6-((1-(3-fluoropropyl)-1H-indazol-5- yl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (Compound 387) [1156] 1-(3-fluoropropyl)-5-nitro-1H-indazole [1157] To a stirred solution of 5-nitro-1H-indazole (1.0 g, 6.13 mmol) in DMF (10 mL) was added NaH (0.294 g, 7.36 mmol) at 0 °C and the mixture was stirred for 1 h at room temperature. Then 1-fluoro-3-iodopropane (0.738 ml, 7.36 mmol) was added to the reaction mixture under argon atmosphere. The resulting reaction mixture was stirred at 90 °C for 16 h. The progress of reaction was monitored by TLC. After completion of the reaction, the reaction mixture was diluted with cold water and the precipitated solid was filtered and dried. The crude residue was purified by prep. HPLC (Shimpak C18 (250*19,5um) Mobile phase A: 10 MM ABC in H
2O, Mobile phase B: acetonitrile) to give 1-(3-fluoropropyl)-5-nitro-1H- indazole (0.300 g, 1.344 mmol, 21.93 % yield) as a yellow solid. [1158] 1-(3-fluoropropyl)-1H-indazol-5-amine [1159] To a degassed solution of 1-(3-fluoropropyl)-5-nitro-1H-indazole (0.300 g, 1.344 mmol) in MeOH (10 ml) was added Pd-C (100 mg, 2.039 mmol) under inert atmosphere. Then the reaction mixture was stirred under hydrogen atmosphere using hydrogen bladder
pressure at room temperature for 16 h. The progress of reaction was monitored by TLC and UPLC. After completion of the reaction, the reaction mixture was filtered under nitrogen atmosphere through a pad of celite and washed with MeOH (2 X 100 mL). The filtrate was concentrated under reduced pressure to give 1-(3-fluoropropyl)-1H-indazol-5-amine (0.250 g, 1.100 mmol, 82 % yield) as a black gummy solid, which was taken into the next step without further purification. [1160] tert-butyl 4-((6-(2-allyl-6-((1-(3-fluoropropyl)-1H-indazol-5-yl)amino)-3-oxo-2,3- dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [1161] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-(methylsulfinyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (0.500 g, 0.972 mmol) in acetonitrile (5 mL) was added 1-(3-fluoropropyl)-1H-indazol-5-amine (0.225 g, 1.166 mmol) at room temperature. The reaction mixture was subjected to stirring at 70 °C for 16 h. The progress of reaction was monitored by TLC. The reaction mixture was diluted with water and extracted with 10% methanol-DCM (50 mL x 2). The combined organic layer was dried over Na2SO4, filtered, and concentrated under reduced pressure. The crude material was purified by flash column chromatography (silica gel, 100-200 mesh size) using methanol- DCM (15-20%) as an eluent to obtain tert-butyl 4-((6-(2-allyl-6-((1-(3-fluoropropyl)-1H- indazol-5-yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2- yl)oxy)piperidine-1-carboxylate (0.3 g, 0.47 mmol, 48 % yield) as a brown solid. [1162] 2-allyl-6-((4-(3-fluoropropoxy)phenyl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)- 1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1163] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-((1-(3-fluoropropyl)-1H-indazol-5- yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine- 1-carboxylate (0.300 g, 0.466 mmol) in 1,4-dioxane (5 mL), was added 4N HCl in 1,4- dioxane (2 mL) at 0 °C. The resulting reaction mixture was stirred at room temperature for 4 h. The progress of reaction was monitored by TLC. After completion of the reaction, the reaction mixture was concentrated under reduced pressure. The crude residue was purified by prep. HPLC (Shimpak C18 (250*19,5um) Mobile phase A: 10 MM ABC in H
2O, Mobile phase B: acetonitrile) to give 2-allyl-6-((1-(3-fluoropropyl)-1H-indazol-5-yl)amino)-1-(6- (piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (14 mg, 0.024 mmol, 5.5 % yield) as an off white-solid. [1164] 2-allyl-6-((1-(3-fluoropropyl)-1H-indazol-5-yl)amino)-1-(6-((1-methylpiperidin-4- yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1165] To a stirred solution of 2-allyl-6-((1-(3-fluoropropyl)-1H-indazol-5-yl)amino)-1-(6-
(piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (0.300 g, 0.552 mmol) in THF (10 mL) was added formaldehyde (6 mL) at 25 °C, then reaction mixture stirred at 25 °C for 5 min. Then was added STAB (0.234 g, 1.104 mmol) portion wise. After complete addition of STAB, the reaction mixture was stirred at 25 °C for 20 mins. The progress of the reaction was monitored by TLC and LCMS. The reaction mixture was quenched with TFA followed by NH
3 in MeOH and diluted with water and extracted with 10% MeOH in DCM (2 X 100 mL). The combined organic extracts was washed with NaHCO
3, dried over anhydrous Na
2SO
4, filtered and concentrated under reduced pressure to afford crude compound which was purified by prep. HPLC (Shimpak C18 (250*19,5um) Mobile phase A: 10 MM ABC in H
2O, Mobile phase B: acetonitrile) to give 2-allyl-6-((1-(3- fluoropropyl)-1H-indazol-5-yl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (45 mg, 0.079 mmol, 15 % yield) as an off- white solid. [1166] Example 254. Synthesis of 2-allyl-6-(1-methyl-1H-indazol-5-ylamino)-1-(2-{1- [(²H₃)methyl]-4-piperidyloxy}-4-pyrimidinyl)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3- one (Compound 383) [1167] This compound was made using a similar method as described in the synthesis of 2- allyl-6-((1-methyl-1H-indazol-5-yl)amino)-1-(6-((1-(methyl-d3)piperidin-4-yl)oxy)pyridin-2- yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one using 2-allyl-6-((1-methyl-1H-indazol-5- yl)amino)-1-(2-(piperidin-4-yloxy)pyrimidin-4-yl)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (470 mg). Yield 98 mg. [1168] Example 255. Synthesis of 2-allyl-6-((6-(2-fluoroethoxy)pyridin-3-yl)amino)-1-(6- (piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 384) and 6-((1-acetyl-1H-indol-5-yl)amino)-2-allyl-1-(6-((1-methylpiperidin- 4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 392) [1169] 1-(5-nitro-1H-indol-1-yl)ethan-1-one [1170] To a stirred solution of 5-nitro-1H-indole (1.5 g, 9.25 mmol) in Dichloromethane (20 ml) were added triethylamine (6.69 ml, 46.3 mmol) and DMAP (0.565 g, 4.63 mmol) at 25 °C. The mixture was stirred 20 min. Then acetyl chloride (1.980 ml, 27.8 mmol) was dissolved in 5 ml of DCM and added dropwise to reaction mixture at 0 °C. The resulting reaction mixture was stirred at 70 °C for 16 h. The progress of reaction was monitored by TLC. After completion of the reaction, the reaction mixture was concentrated under reduced pressure. The crude product was purified by flash column chromatography (silica-gel, mesh size 60-120) using Ethyl acetate- hexane (20 to 21%) as an eluent to obtain 1-(5-nitro-1H-
indol-1-yl)ethan-1-one (1.6 g, 7.13 mmol, 77 % yield) as an yellow solid. [1171] 1-(5-amino-1H-indol-1-yl)ethan-1-one [1172] To a degassed solution of 1-(5-nitro-1H-indol-1-yl)ethan-1-one (1.6 g, 7.84 mmol) in MeOH (30 mL) was added 10% Pd/C (0.834 g, 0.784 mmol) under an inert atmosphere. Then the reaction mixture was stirred under a hydrogen atmosphere using hydrogen bladder pressure at room temperature for 16 h. The progress of the reaction was monitored by TLC and UPLC. After completion of the reaction, the reaction mixture was filtered under a nitrogen atmosphere through a pad of celite and washed with MeOH (2 X 100 mL). The filtrate was concentrated under reduced pressure to give 1-(5-amino-1H-indol-1-yl)ethan-1- one (450 mg, 2.325 mmol, 29.7 % yield). [1173] tert-butyl 4-((6-(6-((1-acetyl-1H-indol-5-yl)amino)-2-allyl-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [1174] To a stirred solution tert-butyl 4-((6-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (0.9 g, 1.696 mmol) in acetic acid (5 ml) was added 1-(5-amino-1H-indol-1-yl)ethan-1-one (0.355 g, 2.035 mmol) at room temperature. The reaction mixture was subjected to stirring at 70 °C for 16 h. The progress of reaction was monitored by TLC. After completion of the reaction, the reaction mixture was diluted with water and extracted with 10% methanol-DCM (50 mL x 2). The combined organic layer was dried over Na
2SO
4, filtered, and concentrated under reduced pressure to give crude tert-butyl 4-((6-(6-((1-acetyl-1H-indol-5-yl)amino)-2-allyl-3-oxo-2,3- dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (700 mg, 0.784 mmol, 46.2 % yield) as a brown solid. [1175] 2-allyl-6-((6-(2-fluoroethoxy)pyridin-3-yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2- yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1176] To a stirred solution of tert-butyl 4-((6-(6-((1-acetyl-1H-indol-5-yl)amino)-2-allyl-3- oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1- carboxylate (270 mg, 0.432 mmol) in 1,4-dioxane (5 mL), was added 4N HCl in 1,4-dioxane (15.79 mg, 0.432 mmol) at 0 °C. The resulting reaction mixture was stirred at room temperature for 2 h. The progress of reaction was monitored by TLC. After completion of the reaction, the reaction mixture was concentrated under reduced pressure to give crude compound which was purified by prep. HPLC (X-Select C18 (19*250, 5mL), Mobile phase A: 0.1 M FA in H
2O, Mobile phase B: acetonitrile) to give 6-((1-acetyl-1H-indol-5- yl)amino)-2-allyl-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (15 mg, 0.028 mmol, 35.3 % yield) as an off white solid.
[1177] 6-((1-acetyl-1H-indol-5-yl)amino)-2-allyl-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin- 2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1178] To a stirred solution of 6-((1-acetyl-1H-indol-5-yl)amino)-2-allyl-1-(6-(piperidin-4- yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (200 mg, 0.381 mmol) in THF (10 mL) was added 37 % aq. formaldehyde (1 mL) at 25 °C. The reaction mixture stirred at 25 °C for 5 min. Then was added sodium triacetoxyborohydride (242 mg, 1.144 mmol) portion-wise, after the complete addition of STAB, the reaction mixture was stirred at 25 °C for 20 minutes. The progress of the reaction was monitored by TLC and LCMS. After completion of reaction, the reaction mixture was quenched with 1N NaOH (10 mL) and extracted in ethyl acetate. The combined organic layers was concentrated under vacuum to give crude compound which was purified by prep. HPLC X-Select C18 (19*250, 5mL), Mobile phase A: 0.1 M FA in H
2O, Mobile phase B: acetonitrile) to give 6-((1-acetyl-1H- indol-5-yl)amino)-2-allyl-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one (28 mg, 0.051 mmol, 10.27 % yield) as an off-white solid. [1179] Example 256. Synthesis of 2-allyl-1-[6-(4-piperidyloxy)-2-pyridyl]-6-(1-propyl- 1H-indazol-5-ylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 390) [1180] This compound was made using a similar method as described in the synthesis of 2- allyl-6-[1-(3-fluoropropyl)-1H-indazol-5-ylamino]-1-[6-(4-piperidyloxy)-2-pyridyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one using tert-butyl 4-((6-(2-allyl-6-(methylsulfinyl)-3- oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1- carboxylate and 1-cyclopropyl-1H-indazol-5-amine. Yield 31 mg. [1181] Example 257. Synthesis of 2-allyl-1-[6-(1-methyl-4-piperidyloxy)-2-pyridyl]-6-(1- propyl-1H-indazol-5-ylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (Compound 385) [1182] This compound was made using a similar method as described in the synthesis of 2- allyl-6-[1-(3-fluoropropyl)-1H-indazol-5-ylamino]-1-[6-(4-piperidyloxy)-2-pyridyl]-1,2- dihydro-3H-1,2,5,7-tetraazainden-3-one using 2-allyl-1-[6-(4-piperidyloxy)-2-pyridyl]-6-(1- propyl-1H-indazol-5-ylamino)-1,2-dihydro-3H-1,2,5,7-tetraazainden-3-one (400 mg). Yield 92 mg. [1183] Example 258. Synthesis of 2-allyl-6-((2-(tert-butyl)-2H-indazol-5-yl)amino)-1-(6- (piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 395) and 2-allyl-6-((2-(tert-butyl)-2H-indazol-5-yl)amino)-1-(6-((1- methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 396)
[1184] 2-(tert-butyl)-5-nitro-2H-indazole [1185] To a stirred solution of 5-nitro-1H-indazole (2.5 g, 15.32 mmol) in DMF (10 mL) was added potassium carbonate (6.35 g, 46.0 mmol) at 0 °C. Then 2-bromo-2-methylpropane (1.00 g, 153 mmol) was added to the reaction mixture under argon atmosphere. The resulting reaction mixture was stirred at 100 °C for 6 h in a miniclave. The progress of reaction was monitored by TLC. After completion of the reaction, the reaction mixture was diluted with cold water and extracted with ethyl acetate. The combined organic layer was washed with cold water, dried over anhydrous sodium sulphate, concentrated under reduced pressure. The crude material was purified by column chromatography using 30-40% ethyl acetate-hexane as an eluent to give 2-(tert-butyl)-5-nitro-2H-indazole (2 g, 8.85 mmol, 57.7 % yield) as an off-white solid. The structure was confirmed by 1D-NOE data. [1186] 2-(tert-butyl)-2H-indazol-5-amine [1187] To a degassed solution of 2-(tert-butyl)-5-nitro-2H-indazole (2 g, 9.12 mmol) in MeOH (10 ml) was added 10% Pd-C (100 mg, 2.039 mmol) under inert atmosphere. Then the reaction mixture was stirred under hydrogen atmosphere using hydrogen bladder pressure at room temperature for 16 h. The progress of reaction was monitored by TLC and UPLC. After completion of the reaction, the reaction mixture was filtered under nitrogen atmosphere through a pad of celite and washed with MeOH (2 X 100 mL). The filtrate was concentrated under reduced pressure to give 2-(tert-butyl)-2H-indazol-5-amine (1.5 g, 6.97 mmol, 76 % yield) as a brown solid, which was taken into the next step without further purification. [1188] tert-butyl 4-((6-(2-allyl-6-((2-(tert-butyl)-2H-indazol-5-yl)amino)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [1189] To a stirred solution tert-butyl 4-((6-(2-allyl-6-(methylsulfinyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (1g, 1.943 mmol) in acetonitrile (5 mL) was added 2-(tert-butyl)-2H-indazol-5-amine (0.478 g, 2.53 mmol) at room temperature. The reaction mixture was subjected to stirring at 70 °C for 16 h. The progress of reaction was monitored by TLC. After completion of the reaction, the reaction mixture was diluted with water and extracted with 10% methanol-DCM (50 mL x 2). The combined organic layer was dried over Na2SO4, filtered, and concentrated under reduced pressure. The crude material was purified by flash column chromatography (silica gel, 100- 200 mesh size) using methanol-DCM (15-20%) as an eluent to obtain tert-butyl 4-((6-(2- allyl-6-((2-(tert-butyl)-2H-indazol-5-yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4- d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (1 g, 1.391 mmol, 71.6 % yield) as a brown solid.
[1190] 2-allyl-6-((2-(tert-butyl)-2H-indazol-5-yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2- yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1191] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-((2-(tert-butyl)-2H-indazol-5- yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine- 1-carboxylate (150 mg, 0.117 mmol) in 1,4-dioxane (5 mL), was added 4N HCl in 1,4- dioxane (1 mL) at 0 °C. The resulting reaction mixture was stirred at room temperature for 4 h. The progress of reaction was monitored by TLC. After completion of the reaction, the reaction mixture was concentrated under reduced pressure. The crude residue was purified by prep. HPLC (X-SELECT C18 (19*150mm)5u, 0.1%FA in Water-ACN as a eluent) to give the pure fraction, which upon lyophilization yielded 2-allyl-6-((2-(tert-butyl)-2H-indazol-5- yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3- one. (5.5 mg, 10.05 µmol, 8.57 % yield) as an off white-solid. [1192] 2-allyl-6-((2-(tert-butyl)-2H-indazol-5-yl)amino)-1-(6-((1-methylpiperidin-4- yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1193] To a stirred solution of 2-allyl-6-((2-(tert-butyl)-2H-indazol-5-yl)amino)-1-(6- (piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (900 mg, 1.668 mmol) in THF (20 mL) was added 37 % aq. formaldehyde (4.5 mL) at 25 °C. The reaction mixture was stirred at 25 °C for 5 min. Then was added sodium triacetoxyborohydride (1060 mg, 5.00 mmol) portion wise, after complete addition of STAB, the reaction mixture was stirred at 25 °C for 20 minutes. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was quenched with TFA followed by NH3 in MeOH and diluted with water and extracted with 10% MeOH in DCM (2 X 100 mL). The combined organic extracts were washed with NaHCO3, dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to afford crude compound which was purified by prep. HPLC (gemini-NX-C18, 10 MM ABC in water-ACN, Rt-16.5, Flow rate-15 mL) to give 2-allyl-6-((2-(tert-butyl)-2H-indazol-5- yl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (150 mg, 0.268 mmol, 16.08 % yield)as an off-white solid. [1194] Example 259. Synthesis of 2-allyl-6-((1-isopropyl-1H-pyrazolo[3,4-b]pyridin-5- yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (Compound 407) and 2-allyl-6-((1-isopropyl-1H-pyrazolo[3,4- b]pyridin-5-yl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one (Compound 406) [1195] 1-isopropyl-5-nitro-1H-pyrazolo[3,4-b]pyridine
[1196] To a stirred solution of 5-nitro-1H-pyrazolo[3,4-b]pyridine (700 mg, 4.27 mmol) in DMF (10 mL) was added cesium carbonate (2223 mg, 6.82 mmol) at 0 °C and, then 2- bromopropane (0.481 ml, 5.12 mmol) was added to the reaction mixture under argon atmosphere. The resulting reaction mixture was stirred at 25 °C for 16 h. The progress of reaction was monitored by TLC. After completion of the reaction, the reaction mixture was diluted with cold water and the precipitated solid was filtered and dried. The crude material was purified by flash column chromatography (silica gel, 100-200 mesh size) using methanol-DCM (15-20%) as an eluent to afford 1-isopropyl-5-nitro-1H-pyrazolo[3,4- b]pyridine (450 mg, 2.160 mmol, 50.7 % yield) as a yellow solid. The structure was confirmed by 1D NOE. [1197] 1-isopropyl-1H-pyrazolo[3,4-b]pyridin-5-amine [1198] To a degassed solution of 1-isopropyl-5-nitro-1H-pyrazolo[3,4-b]pyridine (450 mg, 2.182 mmol) in MeOH (10 ml) was added 10% Pd/C (100 mg, 2.039 mmol) under inert atmosphere. The reaction mixture was stirred under hydrogen atmosphere using hydrogen bladder pressure at room temperature for 16 hours. The progress of reaction was monitored by TLC and UPLC. After completion of the reaction, the reaction mixture was filtered under nitrogen atmosphere through a pad of celite and washed with MeOH (2 X 100 mL). The filtrate was concentrated under reduced pressure to give 1-isopropyl-1H-pyrazolo[3,4- b]pyridin-5-amine (350 mg, 1.887 mmol, 86 % yield) as a black gummy solid, which was taken to the next step without further purification. [1199] tert-butyl 4-((6-(2-allyl-6-((1-isopropyl-1H-pyrazolo[3,4-b]pyridin-5-yl)amino)-3- oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1- carboxylate [1200] To a stirred solution tert-butyl 4-((6-(2-allyl-6-(methylsulfinyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (584 mg, 1.135 mmol) in acetonitrile (5 mL) was added 1-(3-fluoropropyl)-1H-indazol-5-amine (0.225 g, 1.166 mmol) at room temperature. The reaction mixture was subjected to stirring at 70 °C for 16 h. The progress of reaction was monitored by TLC. After completion of the reaction, the reaction mixture was diluted with water and extracted with 10% methanol-DCM (50 mL x 2). The combined organic layer was dried over Na
2SO
4, filtered, and concentrated under reduced pressure. The crude material was purified by flash column chromatography (silica gel, 100- 200 mesh size) using methanol-DCM (15-20%) as an eluent to obtain tert-butyl 4-((6-(2- allyl-6-((1-isopropyl-1H-pyrazolo[3,4-b]pyridin-5-yl)amino)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (240 mg, 0.375
mmol, 33.1 % yield) as a brown solid. [1201] 2-allyl-6-((1-isopropyl-1H-pyrazolo[3,4-b]pyridin-5-yl)amino)-1-(6-(piperidin-4- yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1202] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-((1-isopropyl-1H-pyrazolo[3,4- b]pyridin-5-yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2- yl)oxy)piperidine-1-carboxylate (240 mg, 0.383 mmol) in DCM (5 mL), was added TFA (0.5 mL) at 0 °C. The resulting reaction mixture was stirred at room temperature for 4 h. The progress of reaction was monitored by TLC. After completion of the reaction, the reaction mixture was concentrated under reduced pressure. The crude residue was purified by prep. HPLC (Shimpak C18 (250*19,5um) Mobile phase A: 10 MM ABC in H
2O, Mobile phase B: acetonitrile) to give 2-allyl-6-((1-isopropyl-1H-pyrazolo[3,4-b]pyridin-5-yl)amino)-1-(6- (piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (20 mg, 0.038 mmol, 10 % yield) as an off white-solid. [1203] 2-allyl-6-((1-isopropyl-1H-pyrazolo[3,4-b]pyridin-5-yl)amino)-1-(6-((1- methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1204] To a stirred solution of 2-allyl-6-((1-isopropyl-1H-pyrazolo[3,4-b]pyridin-5- yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3- one (190 mg, 0.361 mmol) in THF (10 mL) was added 37 % aq. formaldehyde (6 mL) at 25 °C. The reaction mixture stirred at 25 °C for 5 min. Then was added sodium triacetoxyborohydride (229 mg, 1.082 mmol) portion wise. After complete addition of STAB, the reaction mixture was stirred at 25 °C for 20 min. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction. The reaction mixture was quenched with TFA followed by NH
3 in MeOH and diluted with water and extracted with 10% MeOH in DCM (2 X 100 mL). The combined organic extracts were washed with NaHCO
3, dried over anhydrous Na
2SO
4, filtered and concentrated under reduced pressure to afford crude compound, which was purified by prep. HPLC (X-select C18,250mm X 19, Mobile phase A: 0.1%FA in H
2O, Mobile phase B: acetonitrile) to give 2-allyl-6-((1- isopropyl-1H-pyrazolo[3,4-b]pyridin-5-yl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin- 2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (0.110 mmol, 31.3 % yield) as an off- white solid. [1205] Example 260. Synthesis of 2-allyl-6-((1-isopropyl-1H-benzo[d]imidazol-5- yl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (Compound 400) [1206] 1-isopropyl-5-nitro-1H-benzo[d]imidazole
[1207] To a stirred solution of 5-nitro-1H-benzo[d]imidazole (1 g, 6.13 mmol) in DMF (15 ml) was added sodium hydride (0.245 g, 6.13 mmol) at 0 °C under inert atmosphere, then was added 2-iodopropane (0.914 ml, 9.19 mmol) at 0 °C. The reaction mixture was stirred at 25 °C for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was quenched with ice-cold water and there appeared a white solid that was filtered and dried under vacuum to give 1-isopropyl-5-nitro- 1H-benzo[d]imidazole (800 mg, 2.77 mmol, 45.2 % yield). [1208] 1-isopropyl-1H-benzo[d]imidazol-5-amine [1209] To a stirred solution of 1-isopropyl-5-nitro-1H-benzo[d]imidazole (1.70 g, 8.28 mmol) in MeOH (10 ml) was added 10% Pd-C (0.882 g, 0.828 mmol). The reaction mixture was stirred under H
2 bladder pressure for 16 h at 25 °C. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was filtered through celite and washed with methanol. The collected organic layers were concentrated under reduced pressure to give 1-isopropyl-1H-benzo[d]imidazol-5-amine (1.5 g, 3.94 mmol, 47.5 % yield). The compound was used as such for the next step. [1210] tert-butyl 4-((6-(2-allyl-6-((1-isopropyl-1H-benzo[d]imidazol-5-yl)amino)-3-oxo-2,3- dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [1211] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-(methylsulfinyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (600 mg, 1.166 mmol) in acetic acid (10 ml) was added 1-isopropyl-1H-benzo[d]imidazol-5-amine (225 mg, 1.283 mmol) at 25 °C. The reaction mixture was stirred at 70 °C for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was concentrated on the rotary evaporator under reduced pressure. The remaining acid was quenched with aq. NaHCO3 (100 mL) and the mixture was extracted with ethyl acetate (2 X 500 mL). The combined organic layers were dried over anhydrous Na
2SO
4, concentrated under reduced pressure to give the crude compound which was purified by column chromatography (SiO2/230-400 mesh; 50-70% EA in n-hexane) to give tert-butyl 4- ((6-(2-allyl-6-((1-isopropyl-1H-benzo[d]imidazol-5-yl)amino)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (300 mg, 0.369 mmol, 31.7 % yield). [1212] 2-allyl-6-((1-isopropyl-1H-benzo[d]imidazol-5-yl)amino)-1-(6-(piperidin-4- yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1213] To the stirred solution of tert-butyl 4-((6-(2-allyl-6-((1-isopropyl-1H- benzo[d]imidazol-5-yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-
2-yl)oxy)piperidine-1-carboxylate (300 mg, 0.479 mmol) in dioxane (5 ml) was added 4M HCl (0.144 ml, 0.575 mmol) in dioxane at 25 °C under inert atmosphere. Then the mixture was stirred at 25 °C for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, reaction mixture was evaporated under reduced pressure to give a crude material which was washed with n-hexane and dried under vacuum to give 2- allyl-6-((1-isopropyl-1H-benzo[d]imidazol-5-yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2- yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (42 mg, 0.080 mmol, 16.67 % yield). [1214] 2-allyl-6-((1-isopropyl-1H-benzo[d]imidazol-5-yl)amino)-1-(6-((1-methylpiperidin-4- yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1215] To a stirred solution of 2-allyl-6-((1-isopropyl-1H-benzo[d]imidazol-5-yl)amino)-1- (6-(piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (240 mg, 0.457 mmol) in THF (5 ml) was added formaldehyde (0.102 ml, 1.370 mmol) at 25 °C and the mixture was stirred for 1 hour. Then STAB (290 mg, 1.370 mmol) was added at 0 °C and the mixture stirred for 2 hours. Progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was quenched with ice cold water and extracted with ethyl acetate (3 x 50 mL). The combined organic layers was washed with brine, dried over anhydrous Na
2SO
4 and concentrated under reduced pressure to give crude product which was purified by prep HPLC (X Select C18, 19 X 250), Mobile phase A: 0.1% FA in H
2O, Mobile phase B: acetonitrile) to give 2-allyl-6-((1-isopropyl-1H- benzo[d]imidazol-5-yl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro- 3H-pyrazolo[3,4-d]pyrimidin-3-one (2 mg, 3.62 µmol, 0.79 % yield). [1216] Example 261. Synthesis of 2-allyl-6-((4-(2-fluoroethoxy)phenyl)amino)-1-(2- (piperidin-4-yloxy)pyrimidin-4-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 391) and 2-allyl-6-((4-(2-fluoroethoxy)phenyl)amino)-1-(2-((1- methylpiperidin-4-yl)oxy)pyrimidin-4-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3- one (Compound 388) [1217] 1-(2-fluoroethoxy)-4-nitrobenzene [1218] To a stirred solution of 4-nitrophenol (800 mg, 5.75 mmol) in DMF (10 ml) was added K2CO3 (2384 mg, 17.25 mmol) followed by the addition of 1-bromo-2-fluoroethane (876 mg, 6.90 mmol) at 25 °C under inert atmosphere. The mixture was then stirred at 100°C for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, reaction mixture quenched with ice cold water and there appeared a solid that was filtered and dried under vacuum to give 1-(2-fluoroethoxy)-4-nitrobenzene (900 mg, 4.86 mmol, 85 % yield) as white solid.
[1219] 4-(2-fluoroethoxy)aniline [1220] To a stirred solution of 1-(2-fluoroethoxy)-4-nitrobenzene (900 mg, 4.86 mmol) in ethanol (10 ml) was added Pd-C (517 mg, 4.86 mmol) at rt under inert atmosphere. The mixture was then stirred under H
2 bladder pressure for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, reaction mixture was filtered using celite bed and the collected fractions were concentrated under reduced pressure to give 4-(2-fluoroethoxy)aniline (700 mg, 4.51 mmol, 93 % yield). [1221] tert-butyl 4-((4-(2-allyl-6-((4-(2-fluoroethoxy)phenyl)amino)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyrimidin-2-yl)oxy)piperidine-1-carboxylate [1222] To a stirred solution of tert-butyl 4-((4-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyrimidin-2-yl)oxy)piperidine-1-carboxylate (700 mg, 1.317 mmol) in acetic acid (2 ml) was added 4-(2-fluoroethoxy)aniline (245 mg, 1.580 mmol) at rt under inert atmosphere. The mixture was stirred at rt for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the solvent was evaporated under reduced pressure. To the residue was added ice and aq. NaHCO3 (10 mL). A solid precipitated and was filtered and then triturated with mixture of solvent MTBE and n- hexane to give tert-butyl 4-((4-(2-allyl-6-((4-(2-fluoroethoxy)phenyl)amino)-3-oxo-2,3- dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyrimidin-2-yl)oxy)piperidine-1-carboxylate (350 mg, 0.519 mmol, 39.4 % yield) as an off-white solid. [1223] 2-allyl-6-((4-(2-fluoroethoxy)phenyl)amino)-1-(2-(piperidin-4-yloxy)pyrimidin-4-yl)- 1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1224] To a stirred solution of tert-butyl 4-((4-(2-allyl-6-((4-(2-fluoroethoxy)phenyl)amino)- 3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyrimidin-2-yl)oxy)piperidine-1- carboxylate (360 mg, 0.593 mmol) in 1,4-dioxane (5 ml) was added 4M HCl in 1,4-dioxane (0.297 ml, 1.187 mmol) at 0 °C under inert atmosphere. The mixture was then stirred at 25 °C for 16 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, reaction mixture was concentrated under reduced pressure and the residue was washed with n-hexane and further purified by Prep HPLC (X Select C18, 19 X 250, Mobile phase A: 0.1% FA in H
2O, Mobile phase B: acetonitrile) to give 2-allyl-6-((4-(2- fluoroethoxy)phenyl)amino)-1-(2-(piperidin-4-yloxy)pyrimidin-4-yl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one (38.8 mg, 18.59 % yield). [1225] 2-allyl-6-((4-(2-fluoroethoxy)phenyl)amino)-1-(2-((1-methylpiperidin-4- yl)oxy)pyrimidin-4-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1226] To a stirred solution of 2-allyl-6-((4-(2-fluoroethoxy)phenyl)amino)-1-(2-((1-
methylpiperidin-4-yl)oxy)pyrimidin-4-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (210 mg, 0.403 mmol, 89 % yield) in THF (3 ml) was added 37% aq. formaldehyde (68.9 mg, 2.270 mmol) at 25 °C. The reaction mixture was stirred at 25 °C for 5 min, then STAB (289 mg, 1.362 mmol) was added portion wise, under inert atmosphere. After complete addition of STAB, the reaction mixture was stirred at 25 °C for 30 min. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was quenched with TFA and the excess TFA was quenched with Ammonia in methanol. The reaction mixture was diluted with water and extracted with 10% MeOH-DCM. The combined organic extracts was washed with brine, dried over anhydrous sodium sulphate, filtered, and concentrated under reduced pressure to give the crude compound which was purified by prep HPLC (X Select C18, 19 X 250, Mobile phase A: 0.1% FA in H
2O, Mobile phase B: acetonitrile) to give 2-allyl-6-((4-(2-fluoroethoxy)phenyl)amino)-1-(2- ((1-methylpiperidin-4-yl)oxy)pyrimidin-4-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3- one (110 mg, 0.211 mmol, 36.6 % yield). [1227] Example 262. Synthesis of 2-allyl-6-((1-methyl-1H-indazol-6-yl)amino)-1-(6- (piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 359) and 2-allyl-6-((1-methyl-1H-indazol-6-yl)amino)-1-(6-((1- methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 389) [1228] tert-butyl 4-((6-(2-allyl-6-((1-methyl-1H-indazol-6-yl)amino)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [1229] To a solution of tert-butyl 4-((6-(2-allyl-6-(methylsulfonyl)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (800 mg, 1.508 mmol) in AcOH (5 ml) was added 1-methyl-1H-indazol-6-amine (244 mg, 1.658 mmol) at rt under inert atmosphere and stirred at rt for 16 h. The progress of the reaction was monitor by TLC and LCMS. After completion of the reaction, reaction mixture was distilled and aq. NaHCO3 (50 mL) was added. The mixture was extracted with DCM (2 X 250 mL). The combined organic layers was washed with brine solution (50 ml) and dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to give the crude compound which was purified by flash column chromatography (silica gel, 100-200 mesh size: ethyl acetate in hexane 60-80%) to give tert-butyl 4-((6-(2-allyl-6-((1-methyl-1H-indazol-6-yl)amino)-3-oxo- 2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (700 mg, 0.972 mmol, 64.5 % yield) as an off-white solid. [1230] 2-allyl-6-((1-methyl-1H-indazol-6-yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-
1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1231] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-((1-methyl-1H-indazol-6-yl)amino)- 3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1- carboxylate (860 mg, 1.439 mmol) in 1,4-dioxane (5 ml) was added 4M HCl in dioxane (0.4 mL, 1.439 mmol) at 0 °C under inert atmosphere. Then the resulting reaction mixture was stirred at room temperature for 16 hours. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was concentrated under reduced pressure. The crude residue was triturated with n-hexane (40 mL) to give 2-allyl-6- ((1-methyl-1H-indazol-6-yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one (700 mg, 1.408 mmol, 97 % yield) as an off-white solid. 50 mg of the above compound was taken and purified by prep HPLC (Column: X-select CSH C18, Mobile Phase A: Ammonium acetate in water, Mobile Phase B: acetonitrile, Flowrate:15.0mL/Min, Rt-10.8) to give the pure compound (21.86 mg). [1232] 2-allyl-6-((1-methyl-1H-indazol-6-yl)amino)-1-(6-((1-methylpiperidin-4- yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1233] To a stirred solution of 2-allyl-6-((1-methyl-1H-indazol-6-yl)amino)-1-(6-(piperidin- 4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (700 mg, 1.407 mmol) in THF (5 ml) was added 37% aq. formaldehyde (0.7 mL, 7.03 mmol) followed by the addition of STAB (895 mg, 4.22 mmol) portion wise. The reaction mixture was stirred at 25 °C for 2 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was quenched with NH
3 in MeOH followed by TFA at rt. The mixture was diluted with water and extracted with 10% MeOH in DCM (2 X 100 mL). The combined organic layers was dried over anhydrous Na
2SO
4 and concentrated under reduced pressure to give the crude compound which was purified by prep HPLC (Column: X- select CSH C18, Mobile Phase A: Ammonium acetate in water, Mobile Phase B: acetonitrile, Flowrate:15.0mL/Min, Rt-10.8) to give 2-allyl-6-((1-methyl-1H-indazol-6- yl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (96 mg, 0.187 mmol, 13.3 % yield) as an off-white solid. [1234] Example 263. Synthesis of 2-allyl-6-((1-isopropyl-1H-benzo[d][1,2,3]triazol-5- yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (Compound 408) and 2-allyl-6-((1-isopropyl-1H- benzo[d][1,2,3]triazol-5-yl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 409) [1235] N1-isopropyl-4-nitrobenzene-1,2-diamine
[1236] To a stirred solution of 2-fluoro-5-nitroaniline (500 mg, 3.20 mmol) and propan-2- amine (0.273 mL, 3.20 mmol) in DMSO (5 mL) was added triethylamine (0.446 mL, 3.20 mmol) at 0 °C and the mixture was stirred for 16 h at room temperature. The progress of reaction was monitored by TLC. After completion of the reaction, the reaction mixture was quenched with ice-cold water and the precipitate obtained was collected by filtration. The precipitate was then dissolved in DCM and purified by flash column chromatography (silica gel, 60-120 using ethyl acetate-hexane (20 to 70%) as an eluent to obtain N1-isopropyl-4- nitrobenzene-1,2-diamine (550 mg, 2.68 mmol, 84 % yield) as a pale brown solid. [1237] 1-isopropyl-5-nitro-1H-benzo[d][1,2,3]triazole [1238] To a stirred solution of N1-isopropyl-4-nitrobenzene-1,2-diamine (1 g, 5.12 mmol) in DMF (10 mL) were added acetic acid (6 mL) at 0 °C and sodium nitrite (0.530 g, 7.68 mmol). The reaction mixture was stirred for 1 h at room temperature. The progress of reaction was monitored by TLC. After completion of the reaction, the reaction mixture was quenched with ice-cold water and the precipitate obtained was collected by filtration and dried in vacuum to give 1-isopropyl-5-nitro-1H-benzo[d][1,2,3]triazole (1 g, 4.36 mmol, 85 % yield) as an orange solid. [1239] 1-isopropyl-1H-benzo[d][1,2,3]triazol-5-amine [1240] To a degassed solution of 1-isopropyl-5-nitro-1H-benzo[d][1,2,3]triazole (500 mg, 2.425 mmol) in MeOH (10 ml) was added 10% Pd/C (160 mg, 2.74 mmol) under an inert atmosphere. The reaction mixture was stirred under a hydrogen atmosphere using hydrogen bladder pressure at room temperature for 16 h. The progress of the reaction was monitored by TLC and UPLC. After completion of the reaction, the reaction mixture was filtered under nitrogen atmosphere through a pad of celite and washed with MeOH (2 X 100 mL). The filtrate was concentrated under reduced pressure (bath temperature: 49 °C) to afford 1- isopropyl-1H-benzo[d][1,2,3]triazol-5-amine (410 mg, 2.234 mmol, 92 % yield) as an brown solid, which was taken into the next step without further purification. [1241] tert-butyl 4-((6-(2-allyl-6-((1-isopropyl-1H-benzo[d][1,2,3]triazol-5-yl)amino)-3-oxo- 2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [1242] To a stirred solution tert-butyl 4-((6-(2-allyl-6-(methylsulfinyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (500 mg, 0.972 mmol) in acetonitrile (10 mL) was added 1-isopropyl-1H-benzo[d][1,2,3]triazol-5-amine (342 mg, 1.943 mmol) at room temperature. The reaction mixture was subjected to stirring at 70 °C for 16 h. The progress of reaction was monitored by LCMS. After the completion of the reaction, the reaction mixture was concentrated under reduced pressure to obtain crude
material that was purified by flash column chromatography (silica gel, 100-200) using ethyl acetate-hexane (50 to 100%) as an eluent to obtain tert-butyl 4-((6-(2-allyl-6-((1-isopropyl- 1H-benzo[d][1,2,3]triazol-5-yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1- yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (350 mg, 0.307 mmol, 31.6 % yield) as a pale yellow gummy liquid. [1243] 2-allyl-6-((1-isopropyl-1H-benzo[d][1,2,3]triazol-5-yl)amino)-1-(6-(piperidin-4- yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1244] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-((1-isopropyl-1H- benzo[d][1,2,3]triazol-5-yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1- yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (350 mg, 0.335 mmol) in 1,4-dioxane (10 mL), was added 4N HCl in 1,4-dioxane (2.0 mL) at 0 °C. The resulting reaction mixture was stirred at room temperature for 4 h. The progress of reaction was monitored by TLC. After completion of the reaction, the reaction mixture was concentrated under reduced pressure. The crude residue was purified by PREP-HPLC (X-Select C18, Mobile phase A: 0.1% FA in H
2O, Mobile phase B: acetonitrile) to afford 2-allyl-6-((1-isopropyl-1H- benzo[d][1,2,3]triazol-5-yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one (10.1 mg, 0.019 mmol, 5.66 % yield) as an off white solid. [1245] 2-allyl-6-((1-isopropyl-1H-benzo[d][1,2,3]triazol-5-yl)amino)-1-(6-((1- methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1246] To a stirred solution of 2-allyl-6-((1-isopropyl-1H-benzo[d][1,2,3]triazol-5-yl)amino)- 1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (245 mg, 0.279 mmol) in THF (10 mL) was added 37 % aq. formaldehyde (20 aq., 2.5 mL) at 25 °C. The reaction mixture was stirred at 25 °C for 5 min. Then sodium triacetoxyborohydride (118 mg, 0.558 mmol) was added portion-wise. After the complete addition, the reaction mixture was stirred at 25 °C for 1 h. The progress of the reaction was monitored by TLC and LCMS. After completion of the reaction, the reaction mixture was quenched with TFA followed by NH3 in MeOH, after which it was diluted with water and extracted in 10% MeOH in DCM (2 X 100 mL). The combined organic extract was washed with NaHCO
3, dried over anhydrous Na2SO4, filtered, and concentrated under reduced pressure to afford crude compound. The crude was purified by PREP-HPLC (X-Select C18, Mobile phase A: 0.1% FA in H
2O, Mobile phase B: acetonitrile) to afford 2-allyl-6-((1-isopropyl-1H- benzo[d][1,2,3]triazol-5-yl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2- dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (62.3 mg, 0.112 mmol, 25 % yield) as an off- white solid.
[1247] Example 264. Synthesis of 2-allyl-6-((2-methyl-2H-indazol-6-yl)amino)-1-(6- (piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 393) and 2-allyl-6-((2-methyl-2H-indazol-6-yl)amino)-1-(6-((1- methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (Compound 398) [1248] 2-methyl-6-nitro-2H-indazole [1249] To a stirred solution of 6-nitro-2H-indazole (2 g, 12.26 mmol) in Tetrahydrofuran (30 ml) was added potassium carbonate (2.54 g, 18.39 mmol) at 25 °C and the mixture was stirred at the same temperature. Then, iodomethane (0.763 ml, 12.26 mmol) was added to the reaction mixture under an argon atmosphere. The resulting reaction mixture was stirred at 70 °C for 16 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was concentrated under reduced pressure. The resulting crude material was purified by flash chromatography (SiO2/230-400 mesh; ~50-80% EtOAc/hexane) to afford 2-methyl-6-nitro-2H-indazole (700 mg, 3.94 mmol, 32.1 % yield) as a yellow solid. [1250] 2-methyl-2H-indazol-6-amine [1251] To a degassed solution of 2-methyl-6-nitro-2H-indazole (700 mg, 3.95 mmol) in EtOH (20 ml) was added 10% Pd/C (546 mg, 3.95 mmol) under an inert atmosphere. Then, the reaction mixture was stirred under a hydrogen atmosphere using hydrogen bladder pressure at room temperature for 16 h. The progress of the reaction was monitored by TLC and UPLC. After completion of the reaction, the reaction mixture was filtered under a nitrogen atmosphere through a pad of celite and washed with MeOH (2 X 100 mL). The filtrate was concentrated under reduced pressure to give 2-methyl-2H-indazol-6-amine (400 mg, 2.60 mmol, 65.8 % yield) as a brown gummy solid, which was taken into the next step without further purification. [1252] tert-butyl 4-((6-(2-allyl-6-((2-methyl-2H-indazol-6-yl)amino)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [1253] To a stirred solution tert-butyl 4-((6-(2-allyl-6-(methylsulfinyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (1014 mg, 1.970 mmol) in AcOH (5 ml) was added 2-methyl-2H-indazol-6-amine (290 mg, 1.970 mmol) at room temperature. The reaction mixture was subjected to stirring at 70 °C for 16 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was diluted with water and extracted with 10% methanol-DCM (50 mL x 2). The combined organic layer was dried over Na
2SO
4, filtered, and concentrated under reduced
pressure. The crude material was purified by flash column chromatography (silica gel, 100- 200 mesh size) using EtOH-hexane (55-60%) as an eluent to obtain tert-butyl 4-((6-(2-allyl- 6-((2-methyl-2H-indazol-6-yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1- yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (280 mg, 0.370 mmol, 18.78 % yield) as a brown solid. [1254] 2-allyl-6-((2-methyl-2H-indazol-6-yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)- 1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1255] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-((2-methyl-2H-indazol-6-yl)amino)- 3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1- carboxylate (350 mg, 0.586 mmol) in DCM (10 ml), was added TFA (66.8 mg, 0.586 mmol) at 0 °C. The resulting reaction mixture was stirred at room temperature for 12 h. The progress of the reaction was monitored by TLC. After completion of the reaction, the reaction mixture was concentrated under reduced pressure. The crude residue was purified by prep. HPLC X- Select C18 (19*250, 5mL), Mobile phase A: 0.1 M FA in H
2O, Mobile phase B: acetonitrile) to give 2-allyl-6-((2-methyl-2H-indazol-6-yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)- 1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (250 mg, 0.502 mmol, 86 % yield) as an off white-solid. [1256] 2-allyl-6-((2-methyl-2H-indazol-6-yl)amino)-1-(6-((1-methylpiperidin-4- yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1257] To a stirred solution of 2-allyl-6-((2-methyl-2H-indazol-6-yl)amino)-1-(6-(piperidin- 4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (280 mg, 0.563 mmol) in THF (10 mL) was added 20% aq. formaldehyde (1 mL) at 25 °C, and then the reaction mixture stirred at 25 °C for 5 min. STAB (358 mg, 1.688 mmol) was added portion-wise and after the complete addition of STAB, the reaction mixture was stirred at 25 °C for 20 min. The progress of the reaction was monitored by TLC and LCMS after completion of the reaction. The reaction mixture was quenched with TFA, followed by NH3 in MeOH, diluted with water and extracted with 10% MeOH in DCM (2 X 100 mL). The combined organic extracts were washed with NaHCO
3, dried over anhydrous Na
2SO
4, filtered, and concentrated under reduced pressure to afford crude compound that was purified by prep. HPLC X-Select C18 (19*250, 5mL), Mobile phase A: 0.1 M FA in H
2O, Mobile phase B: acetonitrile) to give 2-allyl-6-((2-methyl-2H-indazol-6-yl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2- yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (112 mg, 0.219 mmol, 38.9 % yield) as an off-white solid. [1258] Example 265. Synthesis of 2-allyl-6-((6-(2-fluoroethoxy)pyridin-3-yl)amino)-1-(6-
((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3- one (Compound 399) [1259] 2-(2-fluoroethoxy)-5-nitropyridine [1260] To a stirred solution of sodium hydroxide (0.706 g, 17.66 mmol) in Tetrahydrofuran (30 ml) was added 2-fluoroethan-1-ol (0.808 ml, 13.88 mmol) at 25 °C and the mixture was stirred 1 hr at the same temperature. Then 2-chloro-5-nitropyridine (2 g, 12.62 mmol) was added to the reaction mixture under an argon atmosphere. The resulting reaction mixture was stirred at 70 °C for 16 h. The progress of reaction was monitored by TLC. After completion of the reaction, the reaction mixture was concentrated under reduced pressure. Water was added in the crude and stirred for 10 min. A precipitated solid was collected by filtration to give 2-(2-fluoroethoxy)-5-nitropyridine (1.5 g, 7.40 mmol, 58.6 % yield) as an off white solid. [1261] 6-(2-fluoroethoxy)pyridin-3-amine [1262] To a degassed solution of 2-(2-fluoroethoxy)-5-nitropyridine (1.5 g, 8.06 mmol) in EtOH (20 ml) was added 10% Pd/C (1 g, 0.940 mmol) under an inert atmosphere. Then the reaction mixture was stirred under a hydrogen atmosphere using hydrogen bladder pressure at room temperature for 16 h. The progress of the reaction was monitored by TLC and UPLC. After completion of the reaction, the reaction mixture was filtered under a nitrogen atmosphere through a pad of celite and washed with MeOH (2 X 100 mL). The filtrate was concentrated under reduced pressure to give 6-(2-fluoroethoxy)pyridin-3-amine (840 mg, 5.25 mmol, 65.2 % yield). [1263] tert-butyl 4-((6-(2-allyl-6-((6-(2-fluoroethoxy)pyridin-3-yl)amino)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate [1264] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-(methylsulfinyl)-3-oxo-2,3-dihydro- 1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (362 mg, 0.704 mmol) in acetonitrile (5 ml) was added 6-(2-fluoroethoxy)pyridin-3-amine (100 mg, 0.640 mmol) at room temperature. The reaction mixture was subjected to stirring at 70 °C for 16 h. The progress of reaction was monitored by TLC. After completion of the reaction, the reaction mixture was diluted with water and extracted with 10% methanol-DCM (50 mL x 2). The combined organic layer was dried over Na
2SO
4, filtered, and concentrated under reduced pressure to give tert-butyl 4-((6-(2-allyl-6-((6-(2-fluoroethoxy)pyridin-3-yl)amino)-3-oxo- 2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate (300 mg, 0.223 mmol, 34.8 % yield) as a brown solid. [1265] 2-allyl-6-((6-(2-fluoroethoxy)pyridin-3-yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-
yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1266] To a stirred solution of tert-butyl 4-((6-(2-allyl-6-((6-(2-fluoroethoxy)pyridin-3- yl)amino)-3-oxo-2,3-dihydro-1H-pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine- 1-carboxylate (200 mg, 0.330 mmol) in DCM (10 ml), was added 4M HCl in 1,4-dioxane (2 ml, 0.330 mmol) at 0 °C. The resulting reaction mixture was stirred at room temperature for 2 h. The progress of reaction was monitored by TLC. After completion of the reaction, the reaction mixture was concentrated under reduced pressure to give 2-allyl-6-((6-(2- fluoroethoxy)pyridin-3-yl)amino)-1-(6-(piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H- pyrazolo[3,4-d]pyrimidin-3-one (136 mg, 0.27 mmol, 75 % yield) as an brown solid. [1267] 2-allyl-6-((6-(2-fluoroethoxy)pyridin-3-yl)amino)-1-(6-((1-methylpiperidin-4- yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one [1268] To a stirred solution of 2-allyl-6-((6-(2-fluoroethoxy)pyridin-3-yl)amino)-1-(6- (piperidin-4-yloxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one (200 mg, 0.395 mmol) in THF (10 mL) was added aq. formaldehyde (1 mL) at 25 °C. The reaction mixture was stirred at 25 °C for 5 min. Then was added sodium tri acetoxy borohydride (84 mg, 0.395 mmol) portion-wise. After the complete addition of STAB, the reaction mixture was stirred at 25 °C for 20 min. The progress of the reaction was monitored by TLC and LCMS. The reaction mixture was quenched with 1N NaOH (10 mL) and extracted with Ethyl acetate. The combined organic layers was concentrated over vacuum to give crude compound which was purified by prep. HPLC X-Select C18 (19*250, 5mL), Mobile phase A: 0.1 M FA in H
2O, Mobile phase B: acetonitrile) to give 2-allyl-6-((6-(2-fluoroethoxy)pyridin-3- yl)amino)-1-(6-((1-methylpiperidin-4-yl)oxy)pyridin-2-yl)-1,2-dihydro-3H-pyrazolo[3,4- d]pyrimidin-3-one (33.7 mg, 0.063 mmol, 16.51 % yield) as an off-white solid. [1269] Example 266. Synthesis of Intermediates [1270] 1‐(2‐chloropyrimidin‐4‐yl)‐6‐(methylsulfanyl)‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐ pyrazolo[3,4‐d]pyrimidin‐3‐one [1271] A stirred suspension of 6-(methylsulfanyl)-2-(prop-2-en-1-yl)-1H,2H,3H- pyrazolo[3,4-d]pyrimidin-3-one (500 mg, 2.25 mmol, 1.0 equiv.), 2,4-dichloropyrimidine (335 mg, 2.25 mmol, 1.0 equiv.), and cesium carbonate (733 mg, 2.25 mmol, 1.0 equiv.) in dry DMF was heated at 75°C for 21 h. The reaction mixture was then diluted with ethyl acetate (30 ml) and washed successively with NaCl (30 ml, 15% aq.) and sat. brine (30 ml), then filtered through a phase-separator and concentrated under reduced pressure to give a yellow residue, which was purified by flash chromatography (SiO2, 0-40% Ethyl acetate in petroleum ether) to yield the title compound (413 mg, 55%) as a white solid.
[1272] tert‐butyl-4‐({4‐[6‐(methylsulfanyl)‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐ pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyrimidin‐2‐yl}amino)piperidine‐1‐carboxylate [1273] Diisopropylethylamine (208 µl, 1.19 mmol, 2.0 equiv.) was added to a solution of 1‐(2‐chloropyrimidin‐4‐yl)‐6‐(methylsulfanyl)‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐ d]pyrimidin‐3‐one (200 mg, 0.60 mmol, 1.0 equiv.) and tert‐butyl 4‐aminopiperidine‐1‐ carboxylate (180 mg, 0.90 mmol, 1.5 equiv.) in a mixture of THF (5 ml) and DMF (1 ml) and the resulting solution was heated at 80-90°C for 40 h at which point LCMS indicated full conversion of the chloropyrimidine starting material. The mixture was diluted with ethyl acetate (30 ml) and washed successively with NaCl (3x30 ml, 15% aq. adjusted to pH 5 with KH
2PO
4) and sat. brine (30 ml), then filtered through a phase-separator and concentrated under reduced pressure. The residue was purified by flash chromatography (SiO2, 0-70% Ethyl acetate in petroleum ether) to yield the title compound (186 mg, 62%) as a colorless film. [1274] tert‐butyl-(3S)‐3‐(methylamino)piperidine‐1‐carboxylate [1275] Trifluoroacetic acid anhydride (412 µl, 2.97 mmol, 1.1 equiv.) was added dropwise to stirred a solution of tert‐butyl (3S)‐3‐aminopiperidine‐1‐carboxylate (540 mg, 2.70 mmol, 1.0 equiv.) and diisopropylethylamine (939 µl, 5.39 mmol, 2.0 equiv.) in DCM (15 ml) at RT. After 30 min, the solution was washed with NaH
2PO
4 (20 ml, 1 M aq.) followed by sat. brine (20 ml), then filtered through a phase-separator and concentrated under reduced pressure to give tert‐butyl (3S)‐3‐(2,2,2‐trifluoroacetamido)piperidine‐1‐carboxylate (769 mg, 96%) as a colorless oil. This intermediate (769 mg, 2.60 mmol, 1.0 equiv.) was dissolved in DMF (8 ml) to which cesium carbonate (1.46 g, 4.47 mmol, 1.7 equiv.) followed by iodomethane (242 µl, 3.89 mmol, 1.5 equiv.) were added. The resulting mixture was stirred at RT for 17 h, when LCMS indicated full conversion to the methylated amide. A solution of lithium hydroxide (3 ml, 2M aq., 6 mmol, 2.3 equiv.) and methanol (2 ml) were then added, and the stirring was continued for 2 h when full conversion of the trifluoroacetamide intermediate was observed by LCMS. The reaction mixture was diluted with ethyl acetate (60 ml) and washed successively with water (2x60 ml) and sat. brine (60 ml), adjusting the aqueous pH to >11 with NaOH. The organic phase was filtered through a phase-separator and concentrated under reduced pressure to give the title compound (441 mg, 76% over 3 steps) as a yellow oil. [1276] tert‐butyl-(3R)‐3‐(methylamino)piperidine‐1‐carboxylate [1277] The title compound was prepared in analogy with tert‐butyl (3S)‐3‐ (methylamino)piperidine‐1‐carboxylate using tert‐butyl (3R)‐3‐aminopiperidine‐1‐ carboxylate (500 mg). Yield: 456 mg (85% over 3 steps) as a yellow oil. [1278] tert‐butyl-(3S)‐3‐[(6‐bromopyridin‐2‐yl)amino]pyrrolidine‐1‐carboxylate
[1279] This intermediate was prepared with a method similar to that as described in the procedure for making tert-butyl 4-((6-bromopyridin-2-yl)amino)piperidine-1-carboxylate using 2,6-dibromopyridine (254 mg) and tert‐butyl (3S)‐3‐aminopyrrolidine‐1‐carboxylate (2 equiv.). Yield: 123 mg (33%). [1280] tert‐butyl-(3S)‐3‐[(6‐bromopyridin‐2‐yl)(methyl)amino]piperidine‐1‐carboxylate [1281] This intermediate was prepared with a method similar to that as described in the procedure for making tert-butyl 4-((6-bromopyridin-2-yl)amino)piperidine-1-carboxylate using 2,6-dibromopyridine (487 mg) and tert‐butyl (3S)‐3‐aminopyrrolidine‐1‐carboxylate (1 equiv.). Yield: 138 mg (18%) as a yellow oil. [1282] tert‐buty-(3R)‐3‐[(6‐bromopyridin‐2‐yl)(methyl)amino]piperidine‐1‐carboxylate [1283] This intermediate was prepared with a method similar to that as described in the procedure for making tert-butyl 4-((6-bromopyridin-2-yl)amino)piperidine-1-carboxylate using 2,6-dibromopyridine (456 mg) and tert‐butyl (3R)‐3‐aminopyrrolidine‐1‐carboxylate (1 equiv.). Yield: 252 mg (32%) as a yellow oil. [1284] tert‐butyl-4‐[(6‐bromopyridin‐2‐yl)amino]piperidine‐1‐carboxylate [1285] This intermediate was prepared with a method similar to that as described in the procedure for making tert-butyl 4-((6-bromopyridin-2-yl)amino)piperidine-1-carboxylate using 2,6-dibromopyridine (2 g) and tert‐butyl 4‐aminopiperidine‐1‐carboxylate. Yield: 1.45 g (48%). [1286] tert‐butyl-4‐[(6‐bromopyridin‐2‐yl)oxy]piperidine‐1‐carboxylate [1287] This intermediate was prepared with a method similar to that as described in the procedure for making tert-butyl 4-((6-bromopyridin-2-yl)oxy)piperidine-1-carboxylate using 2,6-dibromopyridine (650 mg) and tert‐butyl 4‐hydroxypiperidine‐1‐carboxylate (1 equiv.). Yield: 698 mg (71%) as a colorless oil. [1288] tert‐butyl-(3S)‐3‐[(6‐bromopyridin‐2‐yl)oxy]piperidine‐1‐carboxylate [1289] This intermediate was prepared with a method similar to that as described in the procedure for making tert-butyl 4-((6-bromopyridin-2-yl)oxy)piperidine-1-carboxylate using 2,6-dibromopyridine (235 mg) and tert‐butyl (3S)‐3‐hydroxypiperidine‐1‐carboxylate (1 equiv.). Yield: 275 mg (77%) as a colorless oil. [1290] 2‐bromo‐6‐[(1‐methylpiperidin‐4‐yl)oxy]pyridine [1291] This intermediate was prepared with a method similar to that as described in the procedure for making tert-butyl 4-((6-bromopyridin-2-yl)oxy)piperidine-1-carboxylate using 2,6-dibromopyridine (2 g) and 1‐methylpiperidin‐4‐ol (1 equiv.). Yield: 1.7 g (74%) as a colorless oil.
[1292] tert‐butyl-4‐({6‐[6‐(methylsulfanyl)‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐ pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐2‐yl}oxy)piperidine‐1‐carboxylate [1293] This intermediate was prepared with a method similar to that as described in the procedure for making tert-butyl 4-((6-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate using tert‐butyl 4‐ [(6‐bromopyridin‐2‐yl)oxy]piperidine‐1‐carboxylate (650 mg). Yield: 717 mg (79%) as a brown oil. [1294] tert‐butyl-(3S)‐3‐({6‐[6‐(methylsulfanyl)‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐ pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐2‐yl}oxy)piperidine‐1‐carboxylate [1295] This intermediate was prepared with a method similar to that as described in the procedure for making tert-butyl 4-((6-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate using tert‐butyl (3S)‐3‐[(6‐bromopyridin‐2‐yl)oxy]piperidine‐1‐carboxylate (275 mg). Yield: 135 mg (35%) as pale-yellow oil. [1296] tert‐butyl-(3S)‐3‐({6‐[6‐(methylsulfanyl)‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐ pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐2‐yl}oxy)pyrrolidine‐1‐carboxylate [1297] This intermediate was prepared with a method similar to that as described in the procedure for making tert-butyl 4-((6-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate using tert‐butyl (3S)‐3‐[(6‐bromopyridin‐2‐yl)oxy]pyrrolidine‐1‐carboxylate (484 mg). Yield: 507 mg (74%). [1298] tert‐butyl-(3S)‐3‐({6‐[6‐(methylsulfanyl)‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐ pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐2‐yl}amino)pyrrolidine‐1‐carboxylate [1299] This intermediate was prepared with a method similar to that as described in the procedure for making tert-butyl 4-((6-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate using tert‐butyl (3S)‐3‐[(6‐bromopyridin‐2‐yl)amino]pyrrolidine‐1‐carboxylate (80 mg). Yield: 90 mg (52%) as pale-yellow oil. [1300] 2‐methyl‐1‐{6‐[(1‐methylpiperidin‐4‐yl)oxy]pyridin‐2‐yl}‐6‐(methylsulfanyl)‐ 1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one [1301] This intermediate was prepared with a method similar to that as described in the procedure for making tert-butyl 4-((6-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate using 2‐bromo‐6‐ [(1‐methylpiperidin‐4‐yl)oxy]pyridine (500 mg) and 2‐methyl‐6‐(methylsulfanyl)‐1H,2H,3H‐ pyrazolo[3,4‐d]pyrimidin‐3‐one (1 equiv.). Yield: 252 mg (35%) as pale-yellow oil.
[1302] tert‐butyl-(3S)‐3‐[methyl({6‐[6‐(methylsulfanyl)‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐ 1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐2‐yl})amino]piperidine‐1‐carboxylate [1303] This intermediate was prepared with a method similar to that as described in the procedure for making tert-butyl 4-((6-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate using tert‐butyl (3S)‐3‐[(6‐bromopyridin‐2‐yl)(methyl)amino]piperidine‐1‐carboxylate (138 mg) and 2‐ methyl‐6‐(methylsulfanyl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one (1 equiv.). Yield: 193 mg (crude) as pale-yellow oil. Used in the next step without further purification. [1304] tert‐butyl-(3R)‐3‐[methyl({6‐[6‐(methylsulfanyl)‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐ 1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐2‐yl})amino]piperidine‐1‐carboxylate [1305] This intermediate was prepared with a method similar to that as described in the procedure for making tert-butyl 4-((6-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate using tert‐butyl (3R)‐3‐[(6‐bromopyridin‐2‐yl)(methyl)amino]piperidine‐1‐carboxylate (252 mg) and 2‐ methyl‐6‐(methylsulfanyl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one (1 equiv.). Yield: 345 mg (crude) as pale-yellow oil. Used in the next step without further purification. [1306] 2‐ethyl‐1‐{6‐[(1‐methylpiperidin‐4‐yl)oxy]pyridin‐2‐yl}‐6‐(methylsulfanyl)‐ 1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one [1307] This intermediate was prepared with a method similar to that as described in the procedure for making tert-butyl 4-((6-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate using 2‐bromo‐6‐ [(1‐methylpiperidin‐4‐yl)oxy]pyridine (800 mg) and 2‐ethyl‐6‐(methylsulfanyl)‐1H,2H,3H‐ pyrazolo[3,4‐d]pyrimidin‐3‐one (1 equiv.). Yield: 886 mg (75%) as pale-yellow oil. [1308] tert‐butyl-4‐({6‐[2‐methyl‐6‐(methylsulfanyl)‐3‐oxo‐1H,2H,3H‐pyrazolo[3,4‐ d]pyrimidin‐1‐yl]pyridin‐2‐yl}oxy)piperidine‐1‐carboxylate [1309] This intermediate was prepared with a method similar to that as described in the procedure for making tert-butyl 4-((6-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate using tert‐butyl 4‐ [(6‐bromopyridin‐2‐yl)oxy]piperidine‐1‐carboxylate (165 mg) and 2‐methyl‐6‐ (methylsulfanyl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one (1 equiv.). The purified material was triturated with hot heptane to remove remaining bromopyridine not separated by chromatography. Yield: 210 mg (53%) as a pale-yellow powder. [1310] tert‐butyl-4‐({6‐[6‐(methylsulfanyl)‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐ pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐2‐yl}amino)piperidine‐1‐carboxylate
[1311] This intermediate was prepared with a method similar to that as described in the procedure for making tert-butyl 4-((6-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate using tert‐butyl 4‐ [(6‐bromopyridin‐2‐yl)amino]piperidine‐1‐carboxylate (1g). Yield: 914 mg (65%) as yellow solid. [1312] tert‐butyl-4‐({6‐[6‐amino‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐ d]pyrimidin‐1‐yl]pyridin‐2‐yl}oxy)piperidine‐1‐carboxylate [1313] 3-chloro-peroxybenzoic acid (102 mg, 77%, 0.45 mmol, 1.1 equiv.) was added to a solution of tert‐butyl-4‐({6‐[6‐(methylsulfanyl)‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐ pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐2‐yl}oxy)piperidine‐1‐carboxylate in dihloromethane (5 ml) and the solution was stirred at room temperature for 1.5 h. Ammonia (200 µl, 28% aq., 5.53 mmol, 8.8 equiv.) was then added and stirring was continued for 18 h. The resulting white suspension was filtered to remove ammonium chlorobenzoate and the filtrate was concentrated under reduced pressure to give 6‐amino‐1‐[6‐(piperidin‐4‐yloxy)pyridin‐2‐yl]‐2‐(prop‐2‐en‐1‐ yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one (172 mg, 91%) as a brown foam. [1314] tert‐butyl-4‐[(6‐{6‐[(1,3‐benzothiazol‐6‐yl)amino]‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐ 1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl}pyridin‐2‐yl)oxy]piperidine‐1‐carboxylate; trifluoroacetic acid [1315] This intermediate was prepared with a method similar to that as described in the procedure for making tert-butyl 4-{6-[6-(2-methoxypyrid-4-ylamino)-3-oxo-2-(prop-2-enyl)- 1,2-dihydro-3H-1,2,5,7-tetraazainden-1-yl]pyrid-2-yloxy}piperidine-1-carboxylate using tert‐ butyl 4‐({6‐[6‐amino‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐ yl]pyridin‐2‐yl}oxy)piperidine‐1‐carboxylate (100 mg) and 6‐bromo‐1,3‐benzothiazole (2 equiv.). Yield: 27 mg TFA salt (18%) as a pale-yellow powder. [1316] tert‐butyl-4‐({6‐[3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐6‐[(pyridin‐3‐yl)amino]‐1H,2H,3H‐ pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐2‐yl}oxy)piperidine‐1‐carboxylate [1317] This intermediate was prepared with a method similar to that as described in the procedure for making tert-butyl 4-{6-[6-(2-methoxypyrid-4-ylamino)-3-oxo-2-(prop-2-enyl)- 1,2-dihydro-3H-1,2,5,7-tetraazainden-1-yl]pyrid-2-yloxy}piperidine-1-carboxylate using tert‐ butyl 4‐({6‐[6‐amino‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐ yl]pyridin‐2‐yl}oxy)piperidine‐1‐carboxylate (204 mg) and 3‐bromopyridine (2 equiv.). Yield: 125 mg (54%) as a pale-yellow powder. [1318] tert‐butyl-4‐[(6‐{6‐[(2‐methyl‐1,3‐benzothiazol‐6‐yl)amino]‐3‐oxo‐2‐(prop‐2‐en‐ 1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl}pyridin‐2‐yl)oxy]piperidine‐1‐carboxylate
[1319] This intermediate was prepared with a method similar to that as described in the procedure for making tert-butyl 4-{6-[6-(2-methoxypyrid-4-ylamino)-3-oxo-2-(prop-2-enyl)- 1,2-dihydro-3H-1,2,5,7-tetraazainden-1-yl]pyrid-2-yloxy}piperidine-1-carboxylate using tert‐ butyl 4‐({6‐[6‐amino‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐ yl]pyridin‐2‐yl}oxy)piperidine‐1‐carboxylate (180 mg) and 6-bromo-2-methyl-1,3- benzothiazole (1 equiv.). Yield: 127 mg (54%). [1320] tert‐butyl-4‐[(6‐{6‐[(2‐methoxypyridin‐4‐yl)amino]‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐ 1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl}pyridin‐2‐yl)oxy]piperidine‐1‐carboxylate [1321] This intermediate was prepared with a method similar to that as described in the procedure for making tert-butyl 4-{6-[6-(2-methoxypyrid-4-ylamino)-3-oxo-2-(prop-2-enyl)- 1,2-dihydro-3H-1,2,5,7-tetraazainden-1-yl]pyrid-2-yloxy}piperidine-1-carboxylate using tert‐ butyl 4‐({6‐[6‐amino‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐ yl]pyridin‐2‐yl}oxy)piperidine‐1‐carboxylate (200 mg) and 4-bromo-2-methoxypyridine (1 equiv.). Yield: 288 mg (crude). [1322] tert‐butyl-4‐[(6‐{6‐[(5‐methoxypyridin‐3‐yl)amino]‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐ 1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl}pyridin‐2‐yl)oxy]piperidine‐1‐carboxylate [1323] This intermediate was prepared with a method similar to that as described in the procedure for making tert-butyl 4-{6-[6-(2-methoxypyrid-4-ylamino)-3-oxo-2-(prop-2-enyl)- 1,2-dihydro-3H-1,2,5,7-tetraazainden-1-yl]pyrid-2-yloxy}piperidine-1-carboxylate using tert‐ butyl 4‐({6‐[6‐amino‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐ yl]pyridin‐2‐yl}oxy)piperidine‐1‐carboxylate (200 mg) and 3‐bromo‐5‐methoxypyridine (1 equiv.). Yield: 300 mg (crude). [1324] tert‐butyl-4‐[(6‐{6‐[(5‐fluoropyridin‐3‐yl)amino]‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐ 1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl}pyridin‐2‐yl)oxy]piperidine‐1‐carboxylate [1325] This intermediate was prepared with a method similar to that as described in the procedure for making tert-butyl 4-{6-[6-(2-methoxypyrid-4-ylamino)-3-oxo-2-(prop-2-enyl)- 1,2-dihydro-3H-1,2,5,7-tetraazainden-1-yl]pyrid-2-yloxy}piperidine-1-carboxylate using tert‐ butyl 4‐({6‐[6‐amino‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐ yl]pyridin‐2‐yl}oxy)piperidine‐1‐carboxylate (204 mg) and 3‐bromo‐5‐fluoropyridine (2 equiv.). Yield: 231 mg, (67%). [1326] tert‐butyl-4‐[(6‐{6‐amino‐2‐ethyl‐3‐oxo‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐ yl}pyridin‐2‐yl)oxy]piperidine‐1‐carboxylate [1327] mCPBA (~75%, 142 mg, 617 µmol) was added to a stirred solution of tert‐butyl 4‐ ({6‐[2‐ethyl‐6‐(methylsulfanyl)‐3‐oxo‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐2‐
yl}oxy)piperidine‐1‐carboxylate (300 mg, 617 µmol) in dichloromethane (5 mL) at room temperature. The mixture was stirred for 2 hours, then aq. ammonia (0.3 mL, 4.93 mmol) was added to the reaction mixture. The resulting suspension was heated to 40 °C overnight. The precipitate was removed by filtration and the solution was concentrated to solids (315 mg, quant.) that were used without further purification. [1328] tert‐butyl-(3R)‐3‐({6‐[6‐(methylsulfanyl)‐3‐oxo‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐ pyrazolo[3,4‐d]pyrimidin‐1‐yl]pyridin‐2‐yl}amino)piperidine‐1‐carboxylate [1329] This intermediate was prepared with a method similar to that as described in the procedure for making tert-butyl 4-((6-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate using 6‐ (methylsulfanyl)‐2‐(prop‐2‐en‐1‐yl)‐1H,2H,3H‐pyrazolo[3,4‐d]pyrimidin‐3‐one and tert-butyl (3R)-3-[(6-bromopyridin-2-yl)amino]piperidine-1-carboxylate. Yield: 527 mg, 64%. [1330] tert-butyl-4-[(6-bromopyridin-2-yl)(methyl)amino]piperidine-1-carboxylate [1331] Sodium hydride 60% (192 mg, 4.79 mmol) was added to tert-butyl 4-[(6- bromopyridin-2-yl)amino]piperidine-1-carboxylate (569 mg, 1.6 mmol) under nitrogen in dimethylformamide (15 mL) at rt. The suspension was stirred for one hour, then methyl iodide (497 µL, 7.99 mmol) was added at rt. After 150 minutes the mixture was added to brine (50 mL) and extracted with ethyl acetate (3x20 mL). The combined organic layers were separated, dried using a phase separator and concentrated to residues. The residues were purified by flash chromatography on silica using 0-20% ethyl acetate in petroleum ether. The fractions containing product were combined and concentrated to give colourless oil (420 mg, 71%). [1332] tert-butyl-4-[methyl({6-[6-(methylsulfanyl)-3-oxo-2-(prop-2-en-1-yl)-1H,2H,3H- pyrazolo[3,4-d]pyrimidin-1-yl]pyridin-2-yl})amino]piperidine-1-carboxylate [1333] This intermediate was prepared with a method similar to that as described in the procedure for making tert-butyl 4-((6-(2-allyl-6-(methylthio)-3-oxo-2,3-dihydro-1H- pyrazolo[3,4-d]pyrimidin-1-yl)pyridin-2-yl)oxy)piperidine-1-carboxylate using 6- (methylsulfanyl)-2-(prop-2-en-1-yl)-1H,2H,3H-pyrazolo[3,4-d]pyrimidin-3-one and tert- butyl 4-[(6-bromopyridin-2-yl)(methyl)amino]piperidine-1-carboxylate. Yield: 55 mg, 78%. [1334] tert-butyl-(3S)-3-hydroxypyrrolidine-1-carboxylate [1335] Boc-anhydride (1.5 g, 6.9 mmol) was added to a suspension of triethylamine (2.4 mL, 17 mmol) and (3S)-pyrrolidin-3-ol (0.5 g, 5.7 mmol) in dichloromethane (5 mL) at room temperature. After 1 day the material was concentrated, dissolved in ethyl acetate (25 mL) and washed with aq. NaOH (25 mL, 1M), water (25 mL), and brine (25 mL). The organic layer was dried using a phase separator and concentrated to give colourless oil (851 mg, 79%).
[1336] tert-butyl-(3R)-3-hydroxypyrrolidine-1-carboxylate [1337] Boc-anhydride (1.5 g, 6.9 mmol) was added to a suspension of triethylamine (2.4 mL, 17 mmol) and (3R)-pyrrolidin-3-ol (0.5 g, 5.7 mmol) in dichloromethane (5 mL) at room temperature. After 1 day the material was concentrated, dissolved in ethyl acetate (25 mL) and washed with aq. NaOH (25 mL, 1M), water (25 mL), and brine (25 mL). The organic layer was dried using a phase separator and concentrated to give colourless oil (758 mg, 71%). [1338] Example 267. Wee1A Kinase Binding Assay [1339] We used a LanthaScreen Europium (Eu) Kinase Binding Assay to determine inhibitor affinities (IC50) to Wee1A kinase. The assay utilizes an Alexa Fluor 647-labeled ATP competitive kinase tracer that binds to the ATP binding site of a GST-tagged Wee1A kinase, while a europium (Eu) labeled antibody binds to the GST tag. The proximity of fluorescently labeled kinase tracer and europium (Eu) donor fluorophore antibody leads to fluorescence resonance energy transfer (FRET) to the fluorescence label (acceptor) upon excitation of the Eu (donor). Displacement of tracer from the ATP-binding site by a test compound disturbs the proximity between both labels thus lowering the FRET. [1340] This time resolved-FRET binding assay was performed in white 384-well low volume plates (Greiner, cat # 784075), at room temperature in kinase buffer A (KBA; Invitrogen cat# PV3189), consisting of 50 mM HEPES-NaOH (pH 7.5), 0.01 % Brij-35, 10 mM MgCl
2, and 1 mM EGTA.5 µL of compound (diluted in reaction buffer, to 1 % DMSO) were added to various wells in the plate, followed by 5 µL each of recombinant human Wee1A kinase (full length Wee1 kinase was expressed by baculovirus in insect cells using a N-terminal GST tag (MW: 99.1 kDa) (Invitrogen cat# PV3817) and LanthaScreen Eu-anti-GST antibody (Invitrogen, cat# PV5594). After this, 5 µL of kinase tracer 178 (Invitrogen, cat# PV5593) was added to the plate and the plate was incubated for 60 minutes at room temperature. The final assay conditions in each well were: 30 nM tracer 178, 5 nM Wee1A kinase and 2 nM Eu- labeled antibody in total assay volume of 15 µL. An Envision 2104 (Perkin-Elmer) Plate Reader with the following time-resolve fluorescence setting was used for performing LanthaScreen kinase binding assay. • Excitation 320 nm (30 nm bandpass) • Kinase Tracer Emission 665 nm (10 nm bandpass) • LanthaScreen Eu-anti-Tag Antibody Emission 615 nm (10 nm bandpass) • Dichroic Mirror Instrument dependent • Delay Time 100 µs
• Integration Time 200 µs [1341] To calculate the emission ratio, the acceptor/tracer emission (665 nM) was divided by the antibody/donor emission (615 nM) and the average of duplicate measurement was used for calculations. Data plotting, analysis of binding, and curve fitting was done using Excel add- in XLfit version 5.5.0.5 (IDBS, Guildford, United Kingdom). Results are presented in Table 2, below, where compounds having an IC
50 less than or equal to 10 nM are represented as “A”; compounds having an IC50 greater than 10 nM but less than or equal to 100 nM are represented as “B”; compounds having an IC
50 greater than 100 nM but less than or equal to 500 nM are represented as “C”; and compounds having an IC50 greater than 500 nM are represented as “D”. “NT” means not tested. Table 2. Wee1A kinase Binding IC
50 Values for Exemplary Compounds Com poun 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160
161
Com poun 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 284 285 286 287 288 289 290 291 292 293 294 295
296
Com poun 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386
387
[1342] Example 268. Myt1 kinase Binding Assay [1343] We used a LanthaScreen Europium (Eu) Kinase Binding Assay to determine the binding affinities (IC
50) of compounds to Myt1 kinase. The assay was identical to the Wee1A kinase binding assay disclosed in Example 4, except for the use of recombinant PMYT-1 (full length PMYT-1 was expressed by baculovirus in insect cells using a N- terminal GST tag (MW: 80.8 kDa) (Invitrogen cat# A30984) and LanthaScreen Eu-anti-GST antibody (Invitrogen, cat# PV5594) in place of recombinant human Wee1A kinase and the final concentration of reagents in the assay. The final assay conditions were: 3 nM tracer 178, 2.5 nM PMYT-1 and 1 nM Eu-labeled antibody in total assay volume of 15 µL. Results are presented in Table 3, below, where compounds having an IC50 less than or equal to 20 nM are represented as “A”; compounds having an IC50 greater than 20 nM but less than or equal to 100 nM are represented as “B”; compounds having an IC
50 greater than 100 nM but less than or equal to 500 nM are represented as “C”; and compounds having an IC50 greater than 500 nM are represented as “D”. “NT” designates that the compound was not tested in this assay.
Table 3. Binding IC50 Values for Exemplary Compounds Com Compou 192 193 194 195 196 197 198 199 200 201 202 204 205 206 207 208 209 211 220 223 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250
251
Com Compou 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392
393
Com Compou 406 407 408 409



[1344] Example 269. Wee1A kinase and Myt1 kinase Cellular Assays [1345] Cell culture [1346] Each of an ACHN renal cell carcinoma cell line (ATCC) and a DAOY medulloblastoma cell line, and an A427 lung cancer line were cultured in Minimum Essential Medium Eagle supplemented with 10% fetal calf serum (Sigma), 1% Penicillin-Streptomycin and 10mM HEPES buffer (HyClone). Cell cultures were kept in a humidified incubator at 37⁰ C and 5% CO2. Cells were routinely tested for Mycoplasma contamination. [1347] AlphaLISA assay [1348] For target engagement assessment of Myt1 kinase inhibition, quantification of Cdk1 phosphorylated on threonine 14 was detected using the AlphaLISA® SureFire® Ultra™ Human Phospho-CDK1 (Thr14) assay (Perkin Elmer). DAOY or ACHN cells were seeded into tissue culture treated 96-well plates (VWR) to a density of 10,000 or 20,000 cells per well respectively.24h post seeding cells were treated for 4h with compounds at concentrations ranging from 7 to 5000 nM. Cells were washed with PBS and lysed in 50ul AlphaLISA lysis buffer before freezing at -80 C. Ten ul of the lysate was transferred to 384 well plates and incubated with AlphaLISA donor and acceptor beads according to the manufacturer’s instructions. Dose response curves and EC
50 values were calculated and visualized using GraphPad Prism version 9. Target engagement for Myt1 kinase can also be measured using the same AlphaLISA assay in OVCAR3 cells, an ovarian cancer cell line. NIH:OVCAR-3 (OVCAR3) cells are cultured in RPMI-1640 medium supplemented with 0.01 mg/ml insulin, 20% FBS, 1% Penicillin-Streptomycin and 10 mM HEPES buffer. 14,000 cells per well are seeded into 96 well tissue culture plates in full medium. Twenty-four hours post seeding, cells are treated with compound for 4 hours at concentrations ranging from 0.017 nM to 1000 nM. [1349] Results are presented in Table 4 below where compounds having an EC50 less than or equal to 200 nM are represented as “A”; compounds having an EC50 greater than 200 nM but less than or equal to 500 nM are represented as “B”; compounds having an EC50 greater than
500 nM but less than or equal to 1,000 nM are represented as “C”; and compounds having an EC
50 greater than 1,000 nM are represented as “D”. Table 4. CDK1 Thr14 Phosphorylation EC50 Values for Exemplary Compounds Com Compou 320 321 322 326 333 335 346 354 355 360 361 369 370 373 374 378 383 384 385 386 387 388 389 390 392 394 395 396 397 398 399 400 401 403
406
* indicates that the EC50 was performed in ACHN cells. Otherwise EC50 was performed in DAOY cells.
[1350] High-content Imaging of pCdk1 Y
15 [1351] For target engagement assessment of Wee1A kinase inhibition, high-content imaging of ACHN renal cell carcinoma cells was used for quantification of CDK1 phosphorylated on tyrosine 15 by immunofluorescence (“IF”).20,000 cells per well were seeded in tissue culture treated 96 well plates and treated with compounds at concentrations ranging from 7 to 5,000 nM or from 0.3 to 200 nM for 4h. Cells were fixated for 15 minutes in 4% paraformaldehyde solution, washed in PBS and permeabilized using 0.2% Triton X-100. Blocking was performed for 1h at RT using Blocker FL Fluorescent Blocking Buffer (Thermo Scientific), thereafter cells were incubated with primary antibody (rabbit anti- pCDK1 Y
15, #4539, Cell Signaling Technology) at 4⁰C ON. Alexa Fluor Plus 647 labelled goat anti-rabbit (A32733, Thermo Scientific) was used as secondary antibody. After washing in PBS, nuclei were stained with DAPI solution for 10 min at RT, protected from light. Cells were imaged using an ImageXpress Pico automated imaging system and CellReporter Xpress software (Molecular Devices). The percentage of cells with nuclear positivity for pCdk1 Y
15 compared to DMSO control was determined for each well and drug dose response curves and EC50 values were calculated and visualized using GraphPad Prism. Target engagement for Wee1A kinase can also be measured using the same AlphaLISA assay in OVCAR3 cells, an ovarian cancer cell line. NIH:OVCAR-3 (OVCAR3) cells are cultured in RPMI-1640 medium supplemented with 0.01 mg/ml insulin, 20% FBS, 1% Penicillin-Streptomycin and 10 mM HEPES buffer. 14,000 cells per well are seeded into 96 well tissue culture plates in full medium. Twenty-four hours post seeding, cells are treated with compound for 4 hours at concentrations ranging from 0.017 nM to 1000 nM. [1352] Results are presented in Table 5, below, where compounds having an EC
50 less than or equal to 100 nM are represented as “A”; compounds having an EC50 greater than 100 nM but less than or equal to 500 nM are represented as “B”; compounds having an EC
50 greater than 500 nM but less than or equal to 1000 nM are represented as “C”; and compounds having an EC50 greater than 1000 nM are represented as “D”. Table 5. CDK1 Tyr15 Phosphorylation EC50 Values for Exemplary Compounds Com Compoun 1 114 1 115 1 116 1 117 1 118 1 119
1
120
Com Compoun 1 229 1 230 1 231 1 232 1 233 1 234 1 235 1 236 1 237 1 238 1 239 1 240 1 241 1 242 1 243 1 244 1 245 1 246 1 247 1 248 1 249 1 250 1 251 1 252 1 253 1 254 1 255 2 256 2 257 2 258 2 259 2 260 2 261 2 262 2 263 2 264 2 265 2 266 2 267 2 268 2 269 2 270 2 271 2 272 2 273 2 274
2
275
Com Compoun 3 368 3 369 3 370 3 371 3 372 3 373 3 374 3 375 3 376 3 377 3 378 3 379 3 380 3 381 3 382 3 384 3 385 3 386 3 387 3 388 3 389 3 390 3 391 3 392 3 393 3 394 3 395 3 396 3 397 3 398 3 399 3 400 3 401 3 402 3 403 3 404 3 405 3 406 3 407 3 408 3 409
3 3
3
[1353] Cell Titer Glo viability assay
[1354] ACHN cells, DAOY cells, or A427 cells were seeded at a density of 400, 250, or 500 cells per well respectively, in tissue culture treated 384 well plates (Corning Costar). After overnight incubation, cells were treated with drugs at concentrations ranging from 17 to 10 000 nM. Viability compared to untreated control was assessed at 144 h using Cell Titer Glo assay 2.0 (Promega). Results are presented in Table 6, below, where compounds having an absolute EC
50 less than or equal to 100 nM are represented as “A”; compounds having an EC50 greater than 100 nM but less than or equal to 500 nM are represented as “B”; compounds having an EC
50 greater than 500 nM but less than or equal to 1000 nM are represented as “C”; and compounds having an EC50 greater than 1000 nM are represented as “D”. “NT” means the compounds was not tested in the indicated cells. Table 6. Viability Data in Different Cell Lines for Exemplary Compounds d. 86 88 90 91 95 96 97 98 99 00 04 05 06 07 08 09 11 20 26 27 29 31 33 34 35 36 38 40
41
d. 09 10 11 12 13 14 16 17 18 19 20 21 22 31 32 33 34 35 36 46 54 60 61 73 77 78 84 85 86 87 88 90 92 94 96 97 98 00 03
[1355] Example 270. Treatment of OVCAR-3 Xenografts in Mice [1356] OVCAR-3 cells are an ovarian cancer cell line and a model system in which to study drug efficacy in ovarian cancer. Female balb/c nude mice are inoculated subcutaneously at the right flank with 10 x 10
6 OVCAR-3 cells in 0.2 mL of Dulbecco’s Phosphate-Buffered
Saline with 50% Matrigel®. Animals are randomized into groups of 3-8 mice when average tumor volume reaches 150-200 mm
3 and treated by oral gavage with either vehicle control or a compound disclosed herein at doses of between 7.5 mg/kg and 100 mg/kg and at various dosing frequency (5 days in a row on/2 days in a row off; 3 days on/4 days off; 2 days on/5 days off; and 1 day on/6 days off (i.e., once weekly)). Tumor volume and body weight are recorded twice per week. Tumor volume is measured with a caliper and calculated using the formula V = 0.5 a x b
2 where a and b are the long and short diameters of the tumor in mm, respectively. Anti-tumor activity is assessed using two parameters: tumor growth inhibition (TGI) and T/C. TGI was calculated for each treatment group using the formula: TGI (%) = [1-(T
i-T
0) / (V
i-V
0)] × 100], where T
i is the average tumor volume of a treatment group on a given day, T0 is the average tumor volume of the treatment group on the day of treatment start, Vi is the average tumor volume of the vehicle control group on the same day as Ti, and V0 is the average tumor volume of the vehicle group on the day of treatment start. T/C (%) is calculated by dividing the mean tumor volume of the treated group on a given day by the mean tumor volume of the vehicle control group on the same day, multiplied by 100. [1357] The relevant teachings of all patents, published applications and references cited herein are incorporated by reference in their entirety. [1358] Furthermore, the invention encompasses all variations, combinations, and permutations in which one or more limitations, elements, clauses, and descriptive terms from one or more of the listed claims are introduced into another claim. For example, any claim that is dependent on another claim can be modified to include one or more limitations found in any other claim that is dependent on the same base claim. Where elements are presented as lists, e.g., in Markush group format, each subgroup of the elements is also disclosed, and any element(s) can be removed from the group. It should it be understood that, in general, where the invention, or aspects of the invention, is/are referred to as comprising particular elements and/or features, certain embodiments of the invention or aspects of the invention consist, or consist essentially of, such elements and/or features. For purposes of simplicity, those embodiments have not been specifically set forth in haec verba herein. It is also noted that the terms “comprising” and “containing” are intended to be open and permit the inclusion of additional elements or steps. Where ranges are given, endpoints are included. Furthermore, unless otherwise indicated or otherwise evident from the context and understanding of one of ordinary skill in the art, values that are expressed as ranges can assume any specific value or sub-range within the stated ranges in different embodiments of the invention, to the tenth of the unit of the lower limit of the range, unless the context clearly dictates otherwise.
[1359] Without further description, it is believed that one of ordinary skill in the art can, using the preceding description and the illustrative examples, make and utilize the compounds of the present invention and practice the claimed methods. It should be understood that the foregoing discussion and examples merely present a detailed description of certain preferred embodiments. It will be apparent to those of ordinary skill in the art that various modifications and equivalents can be made without departing from the spirit and scope of the invention.