WO2026077659A1 - Enrichissement en cellules souches hématopoïétiques génétiquement modifiées par édition épigénomique - Google Patents

Enrichissement en cellules souches hématopoïétiques génétiquement modifiées par édition épigénomique

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Publication number
WO2026077659A1
WO2026077659A1 PCT/EP2025/076396 EP2025076396W WO2026077659A1 WO 2026077659 A1 WO2026077659 A1 WO 2026077659A1 EP 2025076396 W EP2025076396 W EP 2025076396W WO 2026077659 A1 WO2026077659 A1 WO 2026077659A1
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Prior art keywords
cells
editing
epigenome
sequence
population
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PCT/EP2025/076396
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English (en)
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Annarita MICCIO
Simone AMISTADI
Fotios Papadopoulos
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Assistance Publique Hopitaux de Paris APHP
Institut National de la Sante et de la Recherche Medicale INSERM
Fondation Imagine
Universite Paris Cite
Original Assignee
Assistance Publique Hopitaux de Paris APHP
Institut National de la Sante et de la Recherche Medicale INSERM
Fondation Imagine
Universite Paris Cite
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Publication of WO2026077659A1 publication Critical patent/WO2026077659A1/fr
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    • C12N9/22Ribonucleases [RNase]; Deoxyribonucleases [DNase]
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Abstract

Ici, nous avons développé une stratégie d'édition épigénomique pour enrichir en HSPC éditées de base en régulant à la baisse de manière transitoire l'expression de CD33. CD33 est un marqueur de surface de la lignée myéloïde, qui est exprimé sur les CSH humaines ayant un potentiel régénératif élevé. Grâce à cette approche, la répression transitoire assurera une régulation à la baisse de CD33 uniquement dans le délai nécessaire pour sélectionner et enrichir en HSPC éditées de base. En particulier, la présente invention concerne un procédé d'édition d'une population de cellules eucaryotes comprenant la mise en contact de la population de cellules eucaryotes avec une plateforme d'édition épigénomique qui comprend (a) une ou plusieurs enzymes d'édition épigénomique, et (b) une ou plusieurs molécules d'ARN guide conçues pour guider l'enzyme d'édition épigénomique vers une séquence cible dans le gène codant pour le CD33 de façon à inactiver l'expression de CD33.
PCT/EP2025/076396 2024-09-17 2025-09-16 Enrichissement en cellules souches hématopoïétiques génétiquement modifiées par édition épigénomique Pending WO2026077659A1 (fr)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
EP24306532 2024-09-17
EP24306532.3 2024-09-17

Publications (1)

Publication Number Publication Date
WO2026077659A1 true WO2026077659A1 (fr) 2026-04-16

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PCT/EP2025/076396 Pending WO2026077659A1 (fr) 2024-09-17 2025-09-16 Enrichissement en cellules souches hématopoïétiques génétiquement modifiées par édition épigénomique

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WO (1) WO2026077659A1 (fr)

Citations (21)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5635483A (en) 1992-12-03 1997-06-03 Arizona Board Of Regents Acting On Behalf Of Arizona State University Tumor inhibiting tetrapeptide bearing modified phenethyl amides
US5663149A (en) 1994-12-13 1997-09-02 Arizona Board Of Regents Acting On Behalf Of Arizona State University Human cancer inhibitory pentapeptide heterocyclic and halophenyl amides
US5780588A (en) 1993-01-26 1998-07-14 Arizona Board Of Regents Elucidation and synthesis of selected pentapeptides
US6214345B1 (en) 1993-05-14 2001-04-10 Bristol-Myers Squibb Co. Lysosomal enzyme-cleavable antitumor drug conjugates
WO2002088172A2 (fr) 2001-04-30 2002-11-07 Seattle Genetics, Inc. Composes pentapeptidiques et leurs utilisations
WO2003026577A2 (fr) 2001-09-24 2003-04-03 Seattle Genetics, Inc. P-aminobenzyl ether dans des agents d'administration de medicaments
WO2004010957A2 (fr) 2002-07-31 2004-02-05 Seattle Genetics, Inc. Conjugues de medicaments et leur utilisation dans le traitement du cancer, d'une maladie auto-immune ou d'une maladie infectieuse
WO2005081711A2 (fr) 2003-11-06 2005-09-09 Seattle Genetics, Inc. Composes de monomethylvaline capables de conjugaison aux ligands
WO2005084390A2 (fr) 2004-03-02 2005-09-15 Seattle Genetics, Inc. Anticorps partiellement charges et procedes de conjugaison desdits anticorps
WO2006132670A2 (fr) 2004-11-12 2006-12-14 Seattle Genetics, Inc. Auristatines comportant une unite d'acide aminobenzoique au n-terminal
WO2007000860A1 (fr) 2005-06-28 2007-01-04 Pioneer Corporation Appareil de réception de diffusion, appareil de détection d’interférence et méthode de détection d’interférence
US8202983B2 (en) 2007-05-10 2012-06-19 Agilent Technologies, Inc. Thiocarbon-protecting groups for RNA synthesis
WO2013176772A1 (fr) 2012-05-25 2013-11-28 The Regents Of The University Of California Procédés et compositions permettant la modification de l'adn cible dirigée par l'arn et la modulation de la transcription dirigée par l'arn
WO2014144592A2 (fr) 2013-03-15 2014-09-18 The General Hospital Corporation Utilisation d'arn de guidage tronqués (arng tron) pour une augmentation de la spécificité d'édition génomique guidée par arn
US20140273226A1 (en) 2013-03-15 2014-09-18 System Biosciences, Llc Crispr/cas systems for genomic modification and gene modulation
US20140273233A1 (en) 2013-03-15 2014-09-18 Sigma-Aldrich Co., Llc Crispr-based genome modification and regulation
WO2020172638A1 (fr) * 2019-02-22 2020-08-27 The Trustees Of The University Of Pennsylvania Compositions et méthodes pour l'inactivation par crispr/cas9 de cd33 dans des cellules humaines progéniteurs/souches hématopoïétiques pour la transplantation allogénique chez des patients atteints d'une leucémie myéloïde aiguë réfractaire et récidivante
WO2021062227A2 (fr) * 2019-09-27 2021-04-01 Beam Therapeutics Inc. Compositions et procédés pour le traitement de cancers liquides
WO2021081244A1 (fr) * 2019-10-22 2021-04-29 Fred Hutchinson Cancer Research Center Réduction de l'expression de cd33 mediee par des editeurs de bases pour protéger sélectivement des cellules thérapeutiques
WO2023043858A1 (fr) * 2021-09-14 2023-03-23 Vor Biopharma Inc. Compositions et procédés d'édition de base multiplex dans des cellules hématopoïétiques
WO2024165484A1 (fr) * 2023-02-06 2024-08-15 Institut National de la Santé et de la Recherche Médicale Enrichissement de cellules souches hématopoïétiques génétiquement modifiées par édition de bases multiplex

Patent Citations (22)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5635483A (en) 1992-12-03 1997-06-03 Arizona Board Of Regents Acting On Behalf Of Arizona State University Tumor inhibiting tetrapeptide bearing modified phenethyl amides
US5780588A (en) 1993-01-26 1998-07-14 Arizona Board Of Regents Elucidation and synthesis of selected pentapeptides
US6214345B1 (en) 1993-05-14 2001-04-10 Bristol-Myers Squibb Co. Lysosomal enzyme-cleavable antitumor drug conjugates
US5663149A (en) 1994-12-13 1997-09-02 Arizona Board Of Regents Acting On Behalf Of Arizona State University Human cancer inhibitory pentapeptide heterocyclic and halophenyl amides
WO2002088172A2 (fr) 2001-04-30 2002-11-07 Seattle Genetics, Inc. Composes pentapeptidiques et leurs utilisations
WO2003026577A2 (fr) 2001-09-24 2003-04-03 Seattle Genetics, Inc. P-aminobenzyl ether dans des agents d'administration de medicaments
WO2004010957A2 (fr) 2002-07-31 2004-02-05 Seattle Genetics, Inc. Conjugues de medicaments et leur utilisation dans le traitement du cancer, d'une maladie auto-immune ou d'une maladie infectieuse
WO2005081711A2 (fr) 2003-11-06 2005-09-09 Seattle Genetics, Inc. Composes de monomethylvaline capables de conjugaison aux ligands
WO2005084390A2 (fr) 2004-03-02 2005-09-15 Seattle Genetics, Inc. Anticorps partiellement charges et procedes de conjugaison desdits anticorps
WO2006132670A2 (fr) 2004-11-12 2006-12-14 Seattle Genetics, Inc. Auristatines comportant une unite d'acide aminobenzoique au n-terminal
WO2007000860A1 (fr) 2005-06-28 2007-01-04 Pioneer Corporation Appareil de réception de diffusion, appareil de détection d’interférence et méthode de détection d’interférence
US8202983B2 (en) 2007-05-10 2012-06-19 Agilent Technologies, Inc. Thiocarbon-protecting groups for RNA synthesis
WO2013176772A1 (fr) 2012-05-25 2013-11-28 The Regents Of The University Of California Procédés et compositions permettant la modification de l'adn cible dirigée par l'arn et la modulation de la transcription dirigée par l'arn
WO2014144592A2 (fr) 2013-03-15 2014-09-18 The General Hospital Corporation Utilisation d'arn de guidage tronqués (arng tron) pour une augmentation de la spécificité d'édition génomique guidée par arn
US20140273226A1 (en) 2013-03-15 2014-09-18 System Biosciences, Llc Crispr/cas systems for genomic modification and gene modulation
WO2014144761A2 (fr) 2013-03-15 2014-09-18 The General Hospital Corporation Augmentation de la spécificité pour la modification du génome à guidage arn
US20140273233A1 (en) 2013-03-15 2014-09-18 Sigma-Aldrich Co., Llc Crispr-based genome modification and regulation
WO2020172638A1 (fr) * 2019-02-22 2020-08-27 The Trustees Of The University Of Pennsylvania Compositions et méthodes pour l'inactivation par crispr/cas9 de cd33 dans des cellules humaines progéniteurs/souches hématopoïétiques pour la transplantation allogénique chez des patients atteints d'une leucémie myéloïde aiguë réfractaire et récidivante
WO2021062227A2 (fr) * 2019-09-27 2021-04-01 Beam Therapeutics Inc. Compositions et procédés pour le traitement de cancers liquides
WO2021081244A1 (fr) * 2019-10-22 2021-04-29 Fred Hutchinson Cancer Research Center Réduction de l'expression de cd33 mediee par des editeurs de bases pour protéger sélectivement des cellules thérapeutiques
WO2023043858A1 (fr) * 2021-09-14 2023-03-23 Vor Biopharma Inc. Compositions et procédés d'édition de base multiplex dans des cellules hématopoïétiques
WO2024165484A1 (fr) * 2023-02-06 2024-08-15 Institut National de la Santé et de la Recherche Médicale Enrichissement de cellules souches hématopoïétiques génétiquement modifiées par édition de bases multiplex

Non-Patent Citations (55)

* Cited by examiner, † Cited by third party
Title
"Handbook of Growth Factors Vol. III: Hematopoietic Growth Factors and Cytokines", 1994, CRC PRESS, pages: 1 - 2
ADAMS ET AL.: "The Biochemistry of the Nucleic Acids", 1992
ANTONIOU, P. ET AL.: "Base-editing-mediated dissection of a γ-globin cis-regulatory element for the therapeutic reactivation of fetal hemoglobin expression", NAT. COMMUN., vol. 13, 2022, pages 6618
BOUTIN, J. ET AL.: "CRISPR-Cas9 globin editing can induce megabase-scale copy-neutral losses of heterozygosity in hematopoietic cells", NAT. COMMUN., vol. 12, 2021, pages 4922
CAPPELLINI, M. D.PORTER, J. B.VIPRAKASIT, V.TAHER, A. T.: "A paradigm shift on beta-thalassaemia treatment: How will we manage this old disease with new therapies?", BLOOD REV., vol. 32, 2018, pages 300 - 311, XP085404817, DOI: 10.1016/j.blre.2018.02.001
CAPPELLUTI MAMOLLICA POETA VVALSONI SQUARATO PMERLIN SMERELLI ILOMBARDO A., NATURE, vol. 627, no. 8003, 28 February 2024 (2024-02-28), pages 416 - 423
CAVAZZANA, M.ANTONIANI, C.MICCIO, A.: "Gene Therapy for β-Hemoglobinopathies", MOL. THER. J. AM. SOC. GENE THER., vol. 25, 2017, pages 1142 - 1154, XP055416157, DOI: 10.1016/j.ymthe.2017.03.024
CHEN ET AL.: "Fusion protein linkers: property, design and functionality", ADV DRUG DELIV REV., vol. 65, no. 10, 2013, pages 1357 - 69, XP028737352, DOI: 10.1016/j.addr.2012.09.039
CHYLINSKI, RHUNCHARPENTIER: "The tracrRNA and Cas9 families of type II CRISPR-Cas immunity systems", RNA BIOLOGY, vol. 10, no. 5, 2013, pages 726 - 737, XP055116068, DOI: 10.4161/rna.24321
CONCORDET, J.-P.HAEUSSLER, M.: "CRISPOR: intuitive guide selection for CRISPR/Cas9 genome editing experiments and screens", NUCLEIC ACIDS RES., vol. 46, 2018, pages 242 - 245
CROMER, M. K. ET AL.: "Global Transcriptional Response to CRISPR/Cas9-AAV6-Based Genome Editing in CD34+ Hematopoietic Stem and Progenitor Cells", MOL. THER. J. AM. SOC. GENE THER., vol. 26, 2018, pages 2431 - 2442, XP093012831, DOI: 10.1016/j.ymthe.2018.06.002
DALEY ET AL., FOCUS, vol. 18, 1996, pages 62 - 67
DELTCHEVA E.CHYLINSKI K.SHARMA C. M.GONZALES K.CHAO Y.PIRZADA Z. A.ECKERT M. R.VOGEL J.CHARPENTIER E.: "CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III", NATURE, vol. 471, 2011, pages 602 - 607, XP055308803, DOI: 10.1038/nature09886
FERRETTIMCSHAN W. M.AJDIC D. J.SAVIC D. J.SAVIC G.LYON K.PRIMEAUX C.SEZATE S.SUVOROV A. N.KENTON S.: "Complete genome sequence of an M1 strain of Streptococcus pyogenes", PROC. NATL. ACAD. SCI., vol. 98, 2001, pages 4658 - 4663
FORGET, B. G.: "Molecular basis of hereditary persistence of fetal hemoglobin", ANN. N. Y., vol. 850, 1998, pages 38 - 44, XP071390909, DOI: 10.1111/j.1749-6632.1998.tb10460.x
FU, Y.SANDER, J. D.REYON, D.CASCIO, V. M.JOUNG, J. K.: "Improving CRISPR-Cas nuclease specificity using truncated guide RNAs", NAT. BIOTECHNOL., vol. 32, 2014, pages 279 - 284, XP055259718, DOI: 10.1038/nbt.2808
GILBERT, L. A. ET AL.: "CRISPR-Mediated Modular RNA-Guided Regulation of Transcription in Eukaryotes", CELL, vol. 154, no. 5, 2013, pages 1173 - 451
HAAPANIEMI, E.BOTLA, S.PERSSON, J.SCHMIERER, B.TAIPALE, J.: "CRISPR-Cas9 genome editing induces a p53-mediated DNA damage response", NAT. MED., vol. 24, 2018, pages 927 - 930, XP036542072, DOI: 10.1038/s41591-018-0049-z
HUMBERT, O. ET AL.: "Engineering resistance to CD33-targeted immunotherapy in normal hematopoiesis by CRISPR/Cas9-deletion of CD33 exon 2", LEUKEMIA, vol. 33, 2019, pages 762 - 808
JIANG, THENDERSON, J.M.COOTE, K. ET AL.: "Chemical modifications of adenine base editor mRNA and guide RNA expand its application scope", NAT COMMUN, vol. 11, 2020, pages 1979, XP055905003, DOI: 10.1038/s41467-020-15892-8
JINEK ET AL., SCIENCE, vol. 337, 2012, pages 816 - 821
JINEK M.CHYLINSKI K.FONFARA I.HAUER M.DOUDNA J. A.CHARPENTIER E.: "A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity", SCIENCE, vol. 337, 2012, pages 816 - 821, XP055229606, DOI: 10.1126/science.1225829
KATO, G. J. ET AL.: "Sickle cell disease", NAT. REV. DIS. PRIMER, vol. 4, 2018, pages 1 - 22
KIM, M. Y. ET AL.: "Genetic Inactivation of CD33 in Hematopoietic Stem Cells to Enable CAR T Cell Immunotherapy for Acute Myeloid Leukemia", CELL, vol. 173, 2018, pages 1439 - 1453
KLUESNER, M. G. ET AL.: "EditR: A Method to Quantify Base Editing from Sanger Sequencing", CRISPR J., vol. 1, 2018, pages 239 - 250, XP055715954, DOI: 10.1089/crispr.2018.0014
KNAPP, D. J. H. F. ET AL.: "Single-cell analysis identifies a CD33+ subset of human cord blood cells with high regenerative potential", NAT. CELL BIOL., vol. 20, 2018, pages 710 - 720, XP036512510, DOI: 10.1038/s41556-018-0104-5
KOBLAN, L. W. ET AL.: "Improving cytidine and adenine base editors by expression optimization and ancestral reconstruction", NAT. BIOTECHNOL., vol. 36, 2018, pages 843 - 846, XP038304659, DOI: 10.1038/nbt.4172
KOSICKI, M.TOMBERG, K.BRADLEY, A.: "Repair of double-strand breaks induced by CRISPR-Cas9 leads to large deletions and complex rearrangements", NAT. BIOTECHNOL., vol. 36, 2018, pages 765 - 771, XP038304589, DOI: 10.1038/nbt.4192
LASZLO, G. S. ET AL.: "Expression and functional characterization of CD33 transcript variants in human acute myeloid leukemia", ONCOTARGET, vol. 7, 2016, pages 43281 - 43294, XP055624307, DOI: 10.18632/oncotarget.9674
LASZLO, G. S.ESTEY, E. H.WALTER, R. B.: "The past and future of CD33 as therapeutic target in acute myeloid leukemia", BLOOD REV., vol. 28, 2014, pages 143 - 153, XP055940017, DOI: 10.1016/j.blre.2014.04.001
LEIBOWITZ, M. L. ET AL.: "Chromothripsis as an on-target consequence of CRISPR-Cas9 genome editing", NAT. GENET., vol. 53, 2021, pages 895 - 905, XP037475892, DOI: 10.1038/s41588-021-00838-7
LI, C. ET AL.: "In vivo HSPC gene therapy with base editors allows for efficient reactivation of fetal -globin in β-YAC mice", BLOOD ADV., vol. 5, 2021, pages 1122 - 1135, XP093031763, DOI: 10.1182/bloodadvances.2020003702
MAGRIN, E. ET AL.: "Long-term outcomes of lentiviral gene therapy for the β-hemoglobinopathies: the HGB-205 trial", NAT. MED., vol. 28, 2022, pages 81 - 88, XP037678144, DOI: 10.1038/s41591-021-01650-w
MARKTEL, S. ET AL.: "Intrabone hematopoietic stem cell gene therapy for adult and pediatric patients affected by transfusion-dependent J3-thalassemia", NAT. MED., vol. 25, 2019, pages 234 - 241, XP036693187, DOI: 10.1038/s41591-018-0301-6
MARTYN, G. E. ET AL.: "A natural regulatory mutation in the proximal promoter elevates fetal globin expression by creating a de novo GATA1 site", BLOOD, vol. 133, 2019, pages 852 - 856
MARTYN, G. E.QUINLAN, K. G. R.CROSSLEY, M.: "The regulation of human globin promoters by CCAAT box elements and the recruitment of NF-Y", BIOCHIM. BIOPHYS. ACTA BBA - GENE, vol. 1860, 2017, pages 525 - 536
MAYURANATHAN, T.: "Adenosine Base Editing of γ-Globin Promoters Induces Fetal Hemoglobin and Inhibit Erythroid Sickling ", ASH, 2020
MILYAVSKY, M. ET AL.: "A Distinctive DNA Damage Response in Human Hematopoietic Stem Cells Reveals an Apoptosis-Independent Role for p53 in Self-Renewal", CELL STEM CELL, vol. 7, 2010, pages 186 - 197
NEEDLEMAN, SAUL B.WUNSCH, CHRISTIAN D.: "A general method applicable to the search for similarities in the amino acid sequence of two proteins", JOURNAL OF MOLECULAR BIOLOGY, vol. 48, no. 3, 1970, pages 443 - 53, XP024011703, DOI: 10.1016/0022-2836(70)90057-4
O'GEEN, H. ET AL.: "dCas9-based epigenome editing suggests acquisition of histone methylation is not sufficient for target gene repression", NUCLEIC ACIDS RES., vol. 45, 2017, pages 9901 - 9916, XP055520742, DOI: 10.1093/nar/gkx578
PETTIT ET AL., ANTIMICROB. AGENTS AND CHEMOTHER., vol. 42, 1998, pages 2961 - 2965
PIEL, F. B.STEINBERG, M. H.REES, D. C.: "Sickle Cell Disease", N. ENGL. J. MED., vol. 376, 2017, pages 1561 - 1573
QI ET AL.: "Repurposing CRISPR as an RNA-Guided Platform for Sequence-Specific Control of Gene Expression", CELL, vol. 152, no. 5, 2013, pages 1173 - 83, XP055299671, DOI: 10.1016/j.cell.2013.02.022
SCHIROLI, G. ET AL.: "Precise Gene Editing Preserves Hematopoietic Stem Cell Function following Transient p53-Mediated DNA Damage Response", CELL STEM CELL, vol. 24, 2019, pages 551 - 565
TAHER, A. T.WEATHERALL, D. J.CAPPELLINI, M. D.: "Thalassaemia", THE LANCET, vol. 391, 2018, pages 155 - 167
THAKORE, P. I. ET AL.: "RNA-guided transcriptional silencing in vivo with S. aureus CRISPR-Cas9 repressors", NAT. COMMUN., vol. 9, 2018, pages 1674, XP055624179, DOI: 10.1038/s41467-018-04048-4
TIJSSEN: "Overview of principles of hybridization and the strategy of nucleic acid probe assay", 1993, ELSEVIER, article "Laboratory Techniques In Biochemistry And Molecular Biology-Hybridization With Nucleic Acid Probes Part I"
TURCHIANO, G. ET AL.: "Quantitative evaluation of chromosomal rearrangements in gene-edited human stem cells by CAST-Seq", CELL STEM CELL, vol. 28, 2021, pages 1136 - 1147
WANG, L. ET AL.: "Reactivation of γ-globin expression through Cas9 or base editor to treat β-hemoglobinopathies", CELL RES., vol. 30, 2020, pages 276 - 278, XP037049316, DOI: 10.1038/s41422-019-0267-z
WEATHERALL, D. J.: "Phenotype-genotype relationships in monogenic disease: lessons from the thalassaemias", NAT. REV. GENET., vol. 2, 2001, pages 245 - 255, XP055222161
WEBER, L. ET AL.: "Editing a γ-globin repressor binding site restores fetal hemoglobin synthesis and corrects the sickle cell disease phenotype", SCI. ADV., vol. 6, 2020, pages 9392
WIENERT, B. ET AL.: "Editing the genome to introduce a beneficial naturally occurring mutation associated with increased fetal globin", NAT. COMMUN., vol. 6, 2015, pages 7085
WIENERT, B. ET AL.: "KLF1 drives the expression of fetal hemoglobin in British HPFH", BLOOD, vol. 130, 2017, pages 803 - 807
WISSFELD JANNIS ET AL: "Deletion of Alzheimer's disease-associated CD33 results in an inflammatory human microglia phenotype", GLIA, vol. 69, no. 6, 4 February 2021 (2021-02-04), US, pages 1393 - 1412, XP055952889, ISSN: 0894-1491, Retrieved from the Internet <URL:https://onlinelibrary.wiley.com/doi/full-xml/10.1002/glia.23968> DOI: 10.1002/glia.23968 *
WOYKE ET AL., ANTIMICROB. AGENTS AND CHEMOTHER., vol. 45, no. 12, 2001, pages 3580 - 3584

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