ATE350666T1 - Verfahren zur analyse von proteinproben - Google Patents

Verfahren zur analyse von proteinproben

Info

Publication number
ATE350666T1
ATE350666T1 AT02769368T AT02769368T ATE350666T1 AT E350666 T1 ATE350666 T1 AT E350666T1 AT 02769368 T AT02769368 T AT 02769368T AT 02769368 T AT02769368 T AT 02769368T AT E350666 T1 ATE350666 T1 AT E350666T1
Authority
AT
Austria
Prior art keywords
proteins
isotopically
labeled
samples
quantitative analysis
Prior art date
Application number
AT02769368T
Other languages
English (en)
Inventor
Kenneth C Parker
Timothy K Nadler
George J Vella
Yulin Huang
Rudolf H Aeberesold
Marcus B Smolka
Original Assignee
Perseptive Biosystems Inc
Inst Systems Biology
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Perseptive Biosystems Inc, Inst Systems Biology filed Critical Perseptive Biosystems Inc
Application granted granted Critical
Publication of ATE350666T1 publication Critical patent/ATE350666T1/de

Links

Classifications

    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/68—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
    • G01N33/6803—General methods of protein analysis not limited to specific proteins or families of proteins
    • Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y10—TECHNICAL SUBJECTS COVERED BY FORMER USPC
    • Y10S—TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y10S435/00—Chemistry: molecular biology and microbiology
    • Y10S435/964—Chemistry: molecular biology and microbiology including enzyme-ligand conjugate production, e.g. reducing rate of nonproductive linkage
    • Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y10—TECHNICAL SUBJECTS COVERED BY FORMER USPC
    • Y10T—TECHNICAL SUBJECTS COVERED BY FORMER US CLASSIFICATION
    • Y10T436/00—Chemistry: analytical and immunological testing
    • Y10T436/24—Nuclear magnetic resonance, electron spin resonance or other spin effects or mass spectrometry
    • Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y10—TECHNICAL SUBJECTS COVERED BY FORMER USPC
    • Y10T—TECHNICAL SUBJECTS COVERED BY FORMER US CLASSIFICATION
    • Y10T436/00—Chemistry: analytical and immunological testing
    • Y10T436/25—Chemistry: analytical and immunological testing including sample preparation
    • Y10T436/25125—Digestion or removing interfering materials

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Molecular Biology (AREA)
  • Hematology (AREA)
  • Chemical & Material Sciences (AREA)
  • Urology & Nephrology (AREA)
  • Physics & Mathematics (AREA)
  • Immunology (AREA)
  • Biomedical Technology (AREA)
  • Biophysics (AREA)
  • Food Science & Technology (AREA)
  • Biotechnology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Microbiology (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Cell Biology (AREA)
  • Medicinal Chemistry (AREA)
  • Analytical Chemistry (AREA)
  • Biochemistry (AREA)
  • General Health & Medical Sciences (AREA)
  • General Physics & Mathematics (AREA)
  • Pathology (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
  • Other Investigation Or Analysis Of Materials By Electrical Means (AREA)
AT02769368T 2001-05-08 2002-05-07 Verfahren zur analyse von proteinproben ATE350666T1 (de)

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
US09/851,058 US7045296B2 (en) 2001-05-08 2001-05-08 Process for analyzing protein samples

Publications (1)

Publication Number Publication Date
ATE350666T1 true ATE350666T1 (de) 2007-01-15

Family

ID=25309855

Family Applications (1)

Application Number Title Priority Date Filing Date
AT02769368T ATE350666T1 (de) 2001-05-08 2002-05-07 Verfahren zur analyse von proteinproben

Country Status (7)

Country Link
US (1) US7045296B2 (de)
EP (1) EP1392848B1 (de)
JP (1) JP4188701B2 (de)
AT (1) ATE350666T1 (de)
AU (1) AU2002340828A1 (de)
DE (1) DE60217328T2 (de)
WO (1) WO2002090929A2 (de)

Families Citing this family (60)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
DE60124265D1 (de) * 2000-05-05 2006-12-14 Purdue Research Foundation Durch affinität ausgewählte unterschriftspeptide zur identifizierung und quantifizierung von proteinen
WO2002014867A2 (en) * 2000-08-11 2002-02-21 Agilix Corporation Ultra-sensitive detection systems
US20050019942A1 (en) * 2001-03-16 2005-01-27 Proteome Systems Ltd. Array-based biomolecule analysis
JP3935487B2 (ja) 2001-07-16 2007-06-20 フーベルト・ケスター 捕獲化合物、その収集物、ならびにプロテオームおよび複合組成物の分析方法
EP1432992A2 (de) * 2001-09-27 2004-06-30 Purdue Research Foundation Kontrolle von isotopeneffekten während der analytfraktionierung
JP2005514603A (ja) * 2001-11-06 2005-05-19 アジリックス・コーポレイション 高感度コード化検出システム
DE10154744A1 (de) * 2001-11-09 2003-05-22 Bayer Ag Isotopencodierte Affinitätsmarker
ES2319634T3 (es) * 2002-03-11 2009-05-11 Caprotec Bioanalytics Gmbh Compuestos y metodos para analizar el proteoma.
US7166441B2 (en) * 2002-03-12 2007-01-23 Perseptive Biosystems Inc. Method and apparatus for the identification and quantification of biomolecules
AU2003243350A1 (en) * 2002-05-31 2003-12-19 Aaron Diamond Aids Research Center Comparative proteomics of progressor and nonprogressor populations
US7846748B2 (en) * 2002-12-02 2010-12-07 The University Of North Carolina At Chapel Hill Methods of quantitation and identification of peptides and proteins
EP1583972B1 (de) 2003-01-16 2010-11-24 caprotec bioanalytics GmbH Verfahren zur identifizierung von auf arzneimittel nicht-zielgerichteten proteinen
EP1588145B1 (de) * 2003-01-30 2011-07-06 Life Technologies Corporation Verfahren, mixturen, kits und zusammensetzungen bezüglich der analytbestimmung
EP1606757A1 (de) * 2003-03-25 2005-12-21 Institut Suisse de Bioinformatique Verfahren zum vergleichen von proteomen
US7202473B2 (en) * 2003-04-10 2007-04-10 Micromass Uk Limited Mass spectrometer
US20050048463A1 (en) * 2003-05-07 2005-03-03 Deng David Xing-Fei Systems and methods for determining cell type composition of mixed cell populations using gene expression signatures
US7355045B2 (en) * 2004-01-05 2008-04-08 Applera Corporation Isotopically enriched N-substituted piperazine acetic acids and methods for the preparation thereof
US7307169B2 (en) * 2004-01-05 2007-12-11 Applera Corporation Isotopically enriched N-substituted piperazines and methods for the preparation thereof
US20050148087A1 (en) 2004-01-05 2005-07-07 Applera Corporation Isobarically labeled analytes and fragment ions derived therefrom
US20050147985A1 (en) * 2004-01-05 2005-07-07 Applera Corporation Mixtures of isobarically labeled analytes and fragments ions derived therefrom
GB2413695B (en) * 2004-04-30 2009-01-21 Micromass Ltd Mass spectrometer
GB0409676D0 (en) * 2004-04-30 2004-06-02 Micromass Ltd Mass spectrometer
CA2567459A1 (en) * 2004-05-19 2005-12-01 Applera Corporation Expression quantification using mass spectrometry
US20070054345A1 (en) * 2004-05-19 2007-03-08 Hunter Christie L Expression quantification using mass spectrometry
US20080206737A1 (en) * 2004-05-19 2008-08-28 Hunter Christie L Expression quantification using mass spectrometry
JP2006078192A (ja) * 2004-09-07 2006-03-23 Shimadzu Corp 生体高分子の質量分析法
US7592139B2 (en) 2004-09-24 2009-09-22 Sandia National Laboratories High temperature flow-through device for rapid solubilization and analysis
JP4563764B2 (ja) * 2004-10-01 2010-10-13 丸善製薬株式会社 ペプチドの定量方法
CA2596117A1 (en) * 2005-02-03 2006-08-10 Perkinelmer Las, Inc. Ultra-sensitive detection systems using multidimension signals
US20070037286A1 (en) * 2005-02-09 2007-02-15 Subhasish Purkayastha Thyroxine-containing compound analysis methods
US20060183238A1 (en) 2005-02-09 2006-08-17 Applera Corporation Amine-containing compound analysis methods
EP1887351A4 (de) * 2005-05-31 2009-04-08 Jcl Bioassay Corp Screening-verfahren für bestimmte proteine bei der umfassenden proteomanalyse
WO2006133192A2 (en) * 2005-06-03 2006-12-14 Waters Investments Limited Generation and use of a catalog of polypeptide-related information for chemical analyses
CA2625781C (en) * 2005-10-13 2014-09-02 Applera Corporation Methods for the development of a biomolecule assay
CA2628708C (en) 2005-11-08 2011-11-29 Tohoku University Method of quantifying membrane protein by using mass spectrometer
US20100216657A1 (en) * 2006-05-16 2010-08-26 Arcxis Biotechnologies, Inc. Pcr-free sample preparation and detection systems for high speed biologic analysis and identification
US7879799B2 (en) * 2006-08-10 2011-02-01 Institute For Systems Biology Methods for characterizing glycoproteins and generating antibodies for same
EP1916526A1 (de) * 2006-10-26 2008-04-30 Koninklijke Philips Electronics N.V. Verfahren zur Diagnose und therapeutischen Targetfindung durch Kombination von Isotopen- und Isobarenmarkern
KR100805777B1 (ko) 2007-02-22 2008-02-21 한국기초과학지원연구원 질량 스펙트럼 데이터 및 1차원 젤에서의 밴드 위치분석을 포함하는 단백질 수식화 분석 시스템 및 이를이용한 단백질 수식화 분석 방법
US7880140B2 (en) * 2007-05-02 2011-02-01 Dh Technologies Development Pte. Ltd Multipole mass filter having improved mass resolution
US8536520B2 (en) * 2007-08-06 2013-09-17 Iroa Technologies Llc Method for generation and use of isotopic patterns in mass spectral data of simple organisms
US7820963B2 (en) * 2007-08-06 2010-10-26 Metabolic Alayses, Inc. Method for generation and use of isotopic patterns in mass spectral data of simple organisms
US7820964B2 (en) * 2007-08-06 2010-10-26 Metabolic Analyses, Inc Method for generation and use of stable isotope patterns in mass spectral data
US8969251B2 (en) * 2007-10-02 2015-03-03 Methabolic Analyses, Inc. Generation and use of isotopic patterns in mass spectral phenotypic comparison of organisms
DK2205342T3 (en) * 2007-10-02 2014-03-03 Iroa Technologies Llc GENERATION AND USE OF isotopic PATTERNS In mass spectrometric FÆNOTYPESAMMENLIGNING OF ORGANISMS
WO2009134439A2 (en) * 2008-05-02 2009-11-05 Purdue Research Foundation Group specific internal standard technology (gsist) for simultaneous identification and quantification of small molecules
JP5299956B2 (ja) 2008-09-29 2013-09-25 国立大学法人東北大学 質量分析装置を用いた代謝酵素群の一斉タンパク質定量に用いるペプチド
JP5317336B2 (ja) 2009-02-23 2013-10-16 国立大学法人東北大学 質量分析装置を用いたタンパク質定量のための評価用ペプチド、人工標準タンパク質、及びタンパク質の定量方法
CN102510903B (zh) * 2009-04-14 2015-07-01 系统生物学研究所 蛋白质和多肽的质谱鉴定和定量检测的方法学革新
EP2545384B1 (de) * 2010-03-12 2017-12-13 JPT Peptide Technologies GmbH Verfahren zur bestimmung der konzentration eines peptids
ES2881535T3 (es) * 2011-03-15 2021-11-29 Massachusetts Inst Technology Detección multiplexada con indicadores codificados con isótopos
WO2013014853A1 (ja) 2011-07-22 2013-01-31 国立大学法人東北大学 質量分析における安定同位体標識標的ペプチド断片の作製方法
JP6847660B2 (ja) 2013-06-07 2021-03-24 マサチューセッツ インスティテュート オブ テクノロジー リガンドをコードする合成バイオマーカーのアフィニティベースの検出
AU2018248327B2 (en) 2017-04-07 2024-10-10 Massachusetts Institute Of Technology Methods to spatially profile protease activity in tissue and sections
CA3094088A1 (en) * 2018-03-16 2019-09-19 Quest Diagnostics Investments Llc Mass spectrometric determination of testosterone in multiplexed patient samples
EP3856921B1 (de) 2018-09-25 2026-04-29 Massachusetts Institute Of Technology Lungenprotease nanosensoren und deren verwendungen
CN109444279A (zh) * 2018-11-06 2019-03-08 北京蛋白世界生物科技有限公司 一种15n代谢标记蛋白质结合质谱平行反应监测定量的方法
CN109438551B (zh) * 2018-11-06 2024-05-28 北京蛋白世界生物科技有限公司 一种微量蛋白质样品浓缩的方法
EP3911753A1 (de) 2019-01-17 2021-11-24 Massachusetts Institute of Technology Sensoren zur erfassung und abbildung von krebsmetastasen
CN110044988B (zh) * 2019-04-26 2021-01-29 常州大学 一种弯曲毛细管电泳检测多酶的方法

Family Cites Families (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5538897A (en) * 1994-03-14 1996-07-23 University Of Washington Use of mass spectrometry fragmentation patterns of peptides to identify amino acid sequences in databases
US6426190B1 (en) * 1995-04-20 2002-07-30 Carnegie Mellon University Difference detection methods using matched multiple dyes
US6127134A (en) 1995-04-20 2000-10-03 Carnegie Mellon University Difference gel electrophoresis using matched multiple dyes
ATE253126T1 (de) * 1998-08-25 2003-11-15 Univ Washington Schnelle quantitative analyse von proteinen oder proteinfunktionen in komplexen gemischen
WO2000043792A2 (en) * 1999-01-20 2000-07-27 The Procter & Gamble Company Methods and kits for sequencing polypeptides

Also Published As

Publication number Publication date
DE60217328T2 (de) 2007-07-19
EP1392848A2 (de) 2004-03-03
WO2002090929A2 (en) 2002-11-14
AU2002340828A1 (en) 2002-11-18
EP1392848B1 (de) 2007-01-03
JP2004533610A (ja) 2004-11-04
US20020192720A1 (en) 2002-12-19
WO2002090929A3 (en) 2003-09-25
JP4188701B2 (ja) 2008-11-26
DE60217328D1 (de) 2007-02-15
US7045296B2 (en) 2006-05-16
EP1392848A4 (de) 2005-06-22

Similar Documents

Publication Publication Date Title
DE60217328D1 (de) Verfahren zur analyse von proteinproben
Lion et al. Why the move to microfluidics for protein analysis?
Issaq The role of separation science in proteomics research
Iacobucci et al. From classical to new generation approaches: An excursus of-omics methods for investigation of protein-protein interaction networks
Roe et al. Gel‐free mass spectrometry‐based high throughput proteomics: Tools for studying biological response of proteins and proteomes
Freeman et al. Proteomics for protein expression profiling in neuroscience
James Protein identification in the post-genome era: the rapid rise of proteomics
DE69912444D1 (de) Schnelle quantitative analyse von proteinen oder proteinfunktionen in komplexen gemischen
JP2003532900A5 (de)
WO2003102220A3 (en) Methods for high throughput and quantitative proteome analysis
ATE344456T1 (de) Durch affinität ausgewählte unterschriftspeptide zur identifizierung und quantifizierung von proteinen
GB2430794A (en) Method and apparatus for identifying proteins in mixtures
US20040031684A1 (en) Method and apparatus for analyzing a mixture of sample substances
DK1502102T3 (da) Forbindelser og fremgangsmåder til analysering af proteomet
WO2005123959A3 (en) Multiplexing assays for analyte detection
WO2004111636A3 (en) Peptide combos and their uses
WO2005114700A3 (en) Expression quantification using mass spectrometry
TW200420491A (en) Integrated microfluidic electro-spray chip system and the analysis method thereof
Hale et al. Application of proteomics for discovery of protein biomarkers
Guttman et al. Bioanalytical tools for the characterization of biologics and biosimilars
WO2003056343A3 (en) Method for protein expression analysis
SE0003566D0 (sv) A method for the quantitative determination of one or more compounds
DE50105263D1 (de) Verfahren zur analyse von proteinen
Raj T et al. Mass spectrometry-based proteomics in forensic investigations: a focused review of LC-MS applications
Ramström et al. Miniaturized proteomics and peptidomics using capillary liquid separation and high resolution mass spectrometry

Legal Events

Date Code Title Description
RER Ceased as to paragraph 5 lit. 3 law introducing patent treaties