BRPI0410283A - métodos de análise de uma região de ácido nucleico marcadora, de detecção ou monitoração de uma população clonal de células em um mamìfero, de diagnóstico e/ou de monitoração de uma condição de doença de mamìfero e de enriquecimento de uma população de moléculas de ácido nucleico em uma amostra biológica - Google Patents

métodos de análise de uma região de ácido nucleico marcadora, de detecção ou monitoração de uma população clonal de células em um mamìfero, de diagnóstico e/ou de monitoração de uma condição de doença de mamìfero e de enriquecimento de uma população de moléculas de ácido nucleico em uma amostra biológica

Info

Publication number
BRPI0410283A
BRPI0410283A BRPI0410283-5A BRPI0410283A BRPI0410283A BR PI0410283 A BRPI0410283 A BR PI0410283A BR PI0410283 A BRPI0410283 A BR PI0410283A BR PI0410283 A BRPI0410283 A BR PI0410283A
Authority
BR
Brazil
Prior art keywords
nucleic acid
monitoring
acid region
population
analyzing
Prior art date
Application number
BRPI0410283-5A
Other languages
English (en)
Inventor
Alexander Alan Morley
Michael Brisco
Pamela Sykes
Original Assignee
Monoquant Pty Ltd
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Monoquant Pty Ltd filed Critical Monoquant Pty Ltd
Publication of BRPI0410283A publication Critical patent/BRPI0410283A/pt
Publication of BRPI0410283B1 publication Critical patent/BRPI0410283B1/pt
Publication of BRPI0410283B8 publication Critical patent/BRPI0410283B8/pt

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Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6827Hybridisation assays for detection of mutation or polymorphism
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6883Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
    • C12Q1/6886Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material for cancer
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/156Polymorphic or mutational markers

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  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Health & Medical Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Wood Science & Technology (AREA)
  • Zoology (AREA)
  • Engineering & Computer Science (AREA)
  • Immunology (AREA)
  • Analytical Chemistry (AREA)
  • Genetics & Genomics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Biotechnology (AREA)
  • Physics & Mathematics (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Biophysics (AREA)
  • Molecular Biology (AREA)
  • Microbiology (AREA)
  • Pathology (AREA)
  • Hospice & Palliative Care (AREA)
  • Oncology (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Investigating Or Analysing Biological Materials (AREA)

Abstract

"MéTODOS DE ANáLISE DE UMA REGIãO DE áCIDO NUCLEICO MARCADORA, DE DETECçãO OU MONITORAçãO DE UMA POPULAçãO CLONAL DE CéLULAS EM UM MAMìFERO, DE DIAGNóSTICO E/OU DE MONITORAçãO DE UMA CONDIçãO DE DOENçA DE MAMìFERO E DE ENRIQUECIMENTO DE UMA POPULAçãO DE MOLéCULAS DE áCIDO NUCLEICO EM UMA AMOSTRA BIOLóGICA". A presente invenção refere-se a um método de caracterização de uma região de ácido nucleico e, mais particularmente, a um método de análise de uma região de ácido nucleico marcadora. O método da presente invenção baseia-se na identificação de uma ou de ambas as regiões de ácido nucleico flanqueando uma região de ácido nucleico marcadora e proporciona um meio de análise de uma região de ácido nucleico marcadora que é característica de uma população clonal de células. O método da presente invenção é útil no contexto de permitir uma variedade de aplicações incluindo, mas não limitadas a, monitoração da progressão de uma condição caracterizada pela presença de uma população clonal de células (tais como condições neoplásicas), monitoração dos níveis de uma ou mais populações clonais de células, predição da possibilidade de uma reincidência de um indivíduo de um estado remissivo para um estado doentio, para avaliar a efetividade de drogas terapêuticas existentes e/ou agentes terapêuticos novos e identificação da presença de uma região marcadora.
BRPI0410283A 2003-05-13 2004-05-13 método de caracterização de um gene de região variável de receptor de células t ou imunoglobulina rearranjado BRPI0410283B8 (pt)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
AU2003902299A AU2003902299A0 (en) 2003-05-13 2003-05-13 A method of analysing a marker nucleic acid molecule
AU2003902299 2003-05-13
PCT/AU2004/000625 WO2004101815A1 (en) 2003-05-13 2004-05-13 Identification of clonal cells by repeats in (eg.) t-cell receptor v/d/j genes

Publications (3)

Publication Number Publication Date
BRPI0410283A true BRPI0410283A (pt) 2006-05-16
BRPI0410283B1 BRPI0410283B1 (pt) 2018-02-06
BRPI0410283B8 BRPI0410283B8 (pt) 2021-07-27

Family

ID=31501168

Family Applications (1)

Application Number Title Priority Date Filing Date
BRPI0410283A BRPI0410283B8 (pt) 2003-05-13 2004-05-13 método de caracterização de um gene de região variável de receptor de células t ou imunoglobulina rearranjado

Country Status (9)

Country Link
US (1) US7785783B2 (pt)
EP (1) EP1633884B1 (pt)
JP (3) JP2007515154A (pt)
KR (2) KR101215194B1 (pt)
CN (1) CN1806051B (pt)
AU (3) AU2003902299A0 (pt)
BR (1) BRPI0410283B8 (pt)
CA (1) CA2525122C (pt)
WO (1) WO2004101815A1 (pt)

Families Citing this family (52)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EA200700942A1 (ru) * 2007-04-06 2007-12-28 Петр Генриевич ЛОХОВ Способ определения качества клеточной культуры
ES2331499B1 (es) * 2007-08-02 2010-10-14 Fundacion Publica Andaluza Para La Gestion De La Investigacion En Salud En Sevilla (Fund.Sevilla) Cebadores, procedimiento y conjunto de utiles para la determinacion d e la funcionalidad del timo humano.
US9365901B2 (en) 2008-11-07 2016-06-14 Adaptive Biotechnologies Corp. Monitoring immunoglobulin heavy chain evolution in B-cell acute lymphoblastic leukemia
WO2010053587A2 (en) 2008-11-07 2010-05-14 Mlc Dx Incorporated Methods of monitoring conditions by sequence analysis
US9528160B2 (en) 2008-11-07 2016-12-27 Adaptive Biotechnolgies Corp. Rare clonotypes and uses thereof
US8748103B2 (en) 2008-11-07 2014-06-10 Sequenta, Inc. Monitoring health and disease status using clonotype profiles
US8691510B2 (en) 2008-11-07 2014-04-08 Sequenta, Inc. Sequence analysis of complex amplicons
US8628927B2 (en) 2008-11-07 2014-01-14 Sequenta, Inc. Monitoring health and disease status using clonotype profiles
US9506119B2 (en) 2008-11-07 2016-11-29 Adaptive Biotechnologies Corp. Method of sequence determination using sequence tags
PL2387627T3 (pl) 2009-01-15 2016-10-31 Profilowanie odporności adaptacyjnej i wytwarzanie przeciwciał monoklonalnych
KR20120044941A (ko) 2009-06-25 2012-05-08 프레드 헛친슨 켄서 리서치 센터 적응 면역의 측정방법
ES2740802T3 (es) 2010-05-06 2020-02-06 Adaptive Biotechnologies Corp Monitorización del estadio de neoplasia linfoide usando perfiles de clonotipo
WO2011140433A2 (en) 2010-05-07 2011-11-10 The Board Of Trustees Of The Leland Stanford Junior University Measurement and comparison of immune diversity by high-throughput sequencing
US10385475B2 (en) 2011-09-12 2019-08-20 Adaptive Biotechnologies Corp. Random array sequencing of low-complexity libraries
CA2853088C (en) 2011-10-21 2018-03-13 Adaptive Biotechnologies Corporation Quantification of adaptive immune cell genomes in a complex mixture of cells
EP3904536B1 (en) 2011-12-09 2025-10-29 Adaptive Biotechnologies Corporation Diagnosis of lymphoid malignancies and minimal residual disease detection
US9499865B2 (en) 2011-12-13 2016-11-22 Adaptive Biotechnologies Corp. Detection and measurement of tissue-infiltrating lymphocytes
US10077478B2 (en) 2012-03-05 2018-09-18 Adaptive Biotechnologies Corp. Determining paired immune receptor chains from frequency matched subunits
KR101621643B1 (ko) 2012-05-08 2016-05-16 어댑티브 바이오테크놀로지스 코포레이션 다중 pcr 반응에서 증폭 바이어스를 측정 및 교정하기 위한 조성물 및 방법
EP3640343B1 (en) 2012-10-01 2026-01-07 Adaptive Biotechnologies Corporation Immunocompetence assessment by adaptive immune receptor diversity and clonality characterization
WO2015160439A2 (en) 2014-04-17 2015-10-22 Adaptive Biotechnologies Corporation Quantification of adaptive immune cell genomes in a complex mixture of cells
WO2014113204A1 (en) 2013-01-17 2014-07-24 Personalis, Inc. Methods and systems for genetic analysis
WO2014121272A2 (en) 2013-02-04 2014-08-07 Quake Stephen R Measurement and comparison of immune diversity by high-throughput sequencing
US9816088B2 (en) 2013-03-15 2017-11-14 Abvitro Llc Single cell bar-coding for antibody discovery
EP3611262B1 (en) 2013-03-15 2020-11-11 Lineage Biosciences, Inc. Methods of sequencing the immune repertoire
US9708657B2 (en) 2013-07-01 2017-07-18 Adaptive Biotechnologies Corp. Method for generating clonotype profiles using sequence tags
EP3965111B8 (en) 2013-08-30 2025-06-11 Personalis, Inc. Methods for genomic analysis
GB2535066A (en) 2013-10-03 2016-08-10 Personalis Inc Methods for analyzing genotypes
CN106103711A (zh) 2013-11-21 2016-11-09 组库创世纪株式会社 T细胞受体和b细胞受体库分析系统及其在治疗和诊断中的应用
ES2741740T3 (es) 2014-03-05 2020-02-12 Adaptive Biotechnologies Corp Métodos que usan moléculas sintéticas que contienen segmentos de nucleótidos aleatorios
US10066265B2 (en) 2014-04-01 2018-09-04 Adaptive Biotechnologies Corp. Determining antigen-specific t-cells
CN107002076B (zh) 2014-09-15 2021-11-23 阿布维特罗有限责任公司 高通量核苷酸文库测序
EP3715455A1 (en) 2014-10-29 2020-09-30 Adaptive Biotechnologies Corp. Highly-multiplexed simultaneous detection of nucleic acids encoding paired adaptive immune receptor heterodimers from many samples
US10125399B2 (en) 2014-10-30 2018-11-13 Personalis, Inc. Methods for using mosaicism in nucleic acids sampled distal to their origin
ES2659492T3 (es) 2014-11-05 2018-03-15 Fundacion De Investigacion Hospital 12 De Octubre Método para cuantificar el nivel de enfermedad mínima residual en un sujeto
US10246701B2 (en) 2014-11-14 2019-04-02 Adaptive Biotechnologies Corp. Multiplexed digital quantitation of rearranged lymphoid receptors in a complex mixture
WO2016086029A1 (en) 2014-11-25 2016-06-02 Adaptive Biotechnologies Corporation Characterization of adaptive immune response to vaccination or infection using immune repertoire sequencing
ES3002665T3 (en) 2015-02-24 2025-03-07 Adaptive Biotechnologies Corp Methods for diagnosing infectious disease and determining hla status using immune repertoire sequencing
AU2016242967B2 (en) 2015-04-01 2021-07-01 Adaptive Biotechnologies Corp. Method of identifying human compatible T cell receptors specific for an antigenic target
US11299783B2 (en) 2016-05-27 2022-04-12 Personalis, Inc. Methods and systems for genetic analysis
US10428325B1 (en) 2016-09-21 2019-10-01 Adaptive Biotechnologies Corporation Identification of antigen-specific B cell receptors
CN110249060A (zh) 2017-01-17 2019-09-17 生命技术公司 用于免疫组库测序的组合物和方法
EP4212631A1 (en) 2017-09-01 2023-07-19 Life Technologies Corporation Compositions and methods for immune repertoire sequencing
US11254980B1 (en) 2017-11-29 2022-02-22 Adaptive Biotechnologies Corporation Methods of profiling targeted polynucleotides while mitigating sequencing depth requirements
US11814750B2 (en) 2018-05-31 2023-11-14 Personalis, Inc. Compositions, methods and systems for processing or analyzing multi-species nucleic acid samples
US10801064B2 (en) 2018-05-31 2020-10-13 Personalis, Inc. Compositions, methods and systems for processing or analyzing multi-species nucleic acid samples
WO2019237146A1 (en) * 2018-06-11 2019-12-19 Monoquant Pty Ltd Amplification method and primers for use therein
CN110656161B (zh) * 2018-06-28 2022-12-13 苏州云泰生物医药科技有限公司 用于检测人免疫球蛋白基因重排的毛细管电泳试剂盒及其使用方法
US12473663B2 (en) 2018-07-18 2025-11-18 Life Technologies Corporation Compositions and methods for immune repertoiresequencing
EP4013867A4 (en) * 2019-08-16 2023-08-30 Resolution Bioscience, Inc. Targeted hybrid capture methods for determination of t cell repertoires
JP7470787B2 (ja) 2019-11-05 2024-04-18 パーソナリス,インコーポレイティド 単一試料からの腫瘍純度の推定
WO2023059654A1 (en) 2021-10-05 2023-04-13 Personalis, Inc. Customized assays for personalized cancer monitoring

Family Cites Families (7)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JP2781438B2 (ja) * 1988-10-20 1998-07-30 モーリィ,アリグザンダー,アラン 白血病及びリンパ腫におけるモノクローナリテイーの診断法
GB9507238D0 (en) * 1995-04-07 1995-05-31 Isis Innovation Detecting dna sequence variations
US6238863B1 (en) * 1998-02-04 2001-05-29 Promega Corporation Materials and methods for indentifying and analyzing intermediate tandem repeat DNA markers
CN1264744A (zh) * 1999-02-26 2000-08-30 上海生元基因开发有限公司 一种通过循环差减进行大规模cDNA克隆和测序的方法
AUPQ687600A0 (en) * 2000-04-13 2000-05-11 Flinders Technologies Pty Ltd A method of detection
KR20030086983A (ko) * 2000-08-22 2003-11-12 베일러 칼리지 오브 메디신 티 세포 리셉터 브이 베타 - 디 베타 - 제이 베타 서열과그것을 검출하는 방법
ATE483822T1 (de) * 2002-10-11 2010-10-15 Univ Erasmus Primer für nukleinsäureamplifikation in pcr- basierten klonalitätsstudien

Also Published As

Publication number Publication date
US7785783B2 (en) 2010-08-31
CN1806051B (zh) 2012-05-30
EP1633884A1 (en) 2006-03-15
AU2009238365A1 (en) 2009-12-10
WO2004101815A1 (en) 2004-11-25
EP1633884A4 (en) 2008-03-05
KR101215194B1 (ko) 2012-12-24
EP1633884B1 (en) 2014-06-25
JP2016027825A (ja) 2016-02-25
CA2525122C (en) 2015-11-24
BRPI0410283B8 (pt) 2021-07-27
JP6189600B2 (ja) 2017-08-30
JP2013116116A (ja) 2013-06-13
US20050255482A1 (en) 2005-11-17
BRPI0410283B1 (pt) 2018-02-06
KR20120107521A (ko) 2012-10-02
AU2004238887A1 (en) 2004-11-25
CA2525122A1 (en) 2004-11-25
JP2007515154A (ja) 2007-06-14
AU2003902299A0 (en) 2003-05-29
CN1806051A (zh) 2006-07-19
KR20060015604A (ko) 2006-02-17

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Free format text: PRAZO DE VALIDADE: 20 (VINTE) ANOS CONTADOS A PARTIR DE 13/05/2004, OBSERVADAS AS CONDICOES LEGAIS. PATENTE CONCEDIDA CONFORME ADI 5.529/DF, QUE DETERMINA A ALTERACAO DO PRAZO DE CONCESSAO