CN109072294A - 用于双重测序的改良衔接子、方法和组合物 - Google Patents
用于双重测序的改良衔接子、方法和组合物 Download PDFInfo
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- CN109072294A CN109072294A CN201680080120.4A CN201680080120A CN109072294A CN 109072294 A CN109072294 A CN 109072294A CN 201680080120 A CN201680080120 A CN 201680080120A CN 109072294 A CN109072294 A CN 109072294A
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- nucleotide sequence
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6869—Methods for sequencing
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6844—Nucleic acid amplification reactions
- C12Q1/6853—Nucleic acid amplification reactions using modified primers or templates
- C12Q1/6855—Ligating adaptors
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- Chemical & Material Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Organic Chemistry (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Health & Medical Sciences (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Engineering & Computer Science (AREA)
- Molecular Biology (AREA)
- Biochemistry (AREA)
- Microbiology (AREA)
- Immunology (AREA)
- Biotechnology (AREA)
- Bioinformatics & Cheminformatics (AREA)
- General Engineering & Computer Science (AREA)
- General Health & Medical Sciences (AREA)
- Genetics & Genomics (AREA)
- Biophysics (AREA)
- Analytical Chemistry (AREA)
- Physics & Mathematics (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
Applications Claiming Priority (5)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US201562264822P | 2015-12-08 | 2015-12-08 | |
| US62/264,822 | 2015-12-08 | ||
| US201662281917P | 2016-01-22 | 2016-01-22 | |
| US62/281,917 | 2016-01-22 | ||
| PCT/US2016/065605 WO2017100441A1 (en) | 2015-12-08 | 2016-12-08 | Improved adapters, methods, and compositions for duplex sequencing |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| CN109072294A true CN109072294A (zh) | 2018-12-21 |
Family
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Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| CN201680080120.4A Pending CN109072294A (zh) | 2015-12-08 | 2016-12-08 | 用于双重测序的改良衔接子、方法和组合物 |
Country Status (11)
| Country | Link |
|---|---|
| US (3) | US11332784B2 (2) |
| EP (2) | EP4043584A1 (2) |
| JP (3) | JP6975507B2 (2) |
| CN (1) | CN109072294A (2) |
| AU (1) | AU2016366231B2 (2) |
| CA (1) | CA3006792A1 (2) |
| ES (1) | ES2911421T3 (2) |
| IL (1) | IL259788B2 (2) |
| PL (1) | PL3387152T3 (2) |
| PT (1) | PT3387152T (2) |
| WO (1) | WO2017100441A1 (2) |
Cited By (3)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| CN113728100A (zh) * | 2019-02-25 | 2021-11-30 | 特韦斯特生物科学公司 | 用于下一代测序的组合物和方法 |
| CN114502742A (zh) * | 2019-08-01 | 2022-05-13 | 特温斯特兰德生物科学有限公司 | 用于核酸测序及相关应用的方法和试剂 |
| WO2024022207A1 (en) * | 2022-07-25 | 2024-02-01 | Mgi Tech Co., Ltd. | Methods of in-solution positional co-barcoding for sequencing long dna molecules |
Families Citing this family (64)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| WO2012129363A2 (en) | 2011-03-24 | 2012-09-27 | President And Fellows Of Harvard College | Single cell nucleic acid detection and analysis |
| WO2013123442A1 (en) | 2012-02-17 | 2013-08-22 | Fred Hutchinson Cancer Research Center | Compositions and methods for accurately identifying mutations |
| PT2828218T (pt) | 2012-03-20 | 2020-11-11 | Univ Washington Through Its Center For Commercialization | Métodos para baixar a taxa de erro da sequenciação paralela massiva de adn utilizando sequenciação duplex de consensus |
| US20160040229A1 (en) | 2013-08-16 | 2016-02-11 | Guardant Health, Inc. | Systems and methods to detect rare mutations and copy number variation |
| US11913065B2 (en) | 2012-09-04 | 2024-02-27 | Guardent Health, Inc. | Systems and methods to detect rare mutations and copy number variation |
| CN104781421B (zh) | 2012-09-04 | 2020-06-05 | 夸登特健康公司 | 检测稀有突变和拷贝数变异的系统和方法 |
| US10876152B2 (en) | 2012-09-04 | 2020-12-29 | Guardant Health, Inc. | Systems and methods to detect rare mutations and copy number variation |
| SG11201600853UA (en) | 2013-08-05 | 2016-03-30 | Twist Bioscience Corp | De novo synthesized gene libraries |
| ES2660989T3 (es) | 2013-12-28 | 2018-03-27 | Guardant Health, Inc. | Métodos y sistemas para detectar variantes genéticas |
| WO2016078095A1 (zh) * | 2014-11-21 | 2016-05-26 | 深圳华大基因科技有限公司 | 鼓泡状接头元件和使用其构建测序文库的方法 |
| US10669304B2 (en) | 2015-02-04 | 2020-06-02 | Twist Bioscience Corporation | Methods and devices for de novo oligonucleic acid assembly |
| US9981239B2 (en) | 2015-04-21 | 2018-05-29 | Twist Bioscience Corporation | Devices and methods for oligonucleic acid library synthesis |
| US10844428B2 (en) | 2015-04-28 | 2020-11-24 | Illumina, Inc. | Error suppression in sequenced DNA fragments using redundant reads with unique molecular indices (UMIS) |
| EP3350314A4 (en) | 2015-09-18 | 2019-02-06 | Twist Bioscience Corporation | OLIGONUCLEIC ACID VARIANT LIBRARIES VARIANT AND SYNTHESIS THEREOF |
| KR102794025B1 (ko) | 2015-09-22 | 2025-04-09 | 트위스트 바이오사이언스 코포레이션 | 핵산 합성을 위한 가요성 기판 |
| CN115920796A (zh) | 2015-12-01 | 2023-04-07 | 特韦斯特生物科学公司 | 功能化表面及其制备 |
| CA3006792A1 (en) | 2015-12-08 | 2017-06-15 | Twinstrand Biosciences, Inc. | Improved adapters, methods, and compositions for duplex sequencing |
| SG11201805119QA (en) | 2015-12-17 | 2018-07-30 | Guardant Health Inc | Methods to determine tumor gene copy number by analysis of cell-free dna |
| US11384382B2 (en) | 2016-04-14 | 2022-07-12 | Guardant Health, Inc. | Methods of attaching adapters to sample nucleic acids |
| ES3002715T3 (en) | 2016-04-14 | 2025-03-07 | Guardant Health Inc | Methods for early detection of cancer |
| US11821028B2 (en) | 2016-07-12 | 2023-11-21 | QIAGEN Sciences, LLP | Single end duplex DNA sequencing |
| CN109312391B (zh) | 2016-07-18 | 2022-06-03 | 豪夫迈·罗氏有限公司 | 生成用于单分子测序的单链环状dna文库的方法 |
| WO2018031588A1 (en) * | 2016-08-09 | 2018-02-15 | Takara Bio Usa, Inc. | Nucleic acid adaptors with molecular identification sequences and use thereof |
| EP3500672A4 (en) | 2016-08-22 | 2020-05-20 | Twist Bioscience Corporation | DE NOVO SYNTHETIZED NUCLEIC ACID LIBRARIES |
| US10417457B2 (en) | 2016-09-21 | 2019-09-17 | Twist Bioscience Corporation | Nucleic acid based data storage |
| GB2573069A (en) | 2016-12-16 | 2019-10-23 | Twist Bioscience Corp | Variant libraries of the immunological synapse and synthesis thereof |
| BR112019013391A2 (pt) | 2016-12-28 | 2020-03-03 | Quest Diagnostics Investments Llc | Adaptador de ácido nucleico, e, método para detecção de uma mutação em uma molécula de dna circulante tumoral (ctdna) de fita dupla. |
| SG11201906428SA (en) | 2017-01-18 | 2019-08-27 | Illumina Inc | Methods and systems for generation and error-correction of unique molecular index sets with heterogeneous molecular lengths |
| EP4556433A3 (en) | 2017-02-22 | 2025-08-06 | Twist Bioscience Corporation | Nucleic acid based data storage |
| WO2018170169A1 (en) | 2017-03-15 | 2018-09-20 | Twist Bioscience Corporation | Variant libraries of the immunological synapse and synthesis thereof |
| IL269431B2 (en) | 2017-03-23 | 2025-05-01 | Univ Washington | Methods for targeted nucleic acid sequence enrichment with applications to error corrected nucleic acid sequencing |
| WO2018183942A1 (en) * | 2017-03-31 | 2018-10-04 | Grail, Inc. | Improved library preparation and use thereof for sequencing-based error correction and/or variant identification |
| AU2018261332B2 (en) | 2017-05-01 | 2024-12-05 | Illumina, Inc. | Optimal index sequences for multiplex massively parallel sequencing |
| EP3622089B1 (en) | 2017-05-08 | 2024-07-17 | Illumina, Inc. | Method for sequencing using universal short adapters for indexing of polynucleotide samples |
| WO2018231872A1 (en) | 2017-06-12 | 2018-12-20 | Twist Bioscience Corporation | Methods for seamless nucleic acid assembly |
| WO2018231864A1 (en) | 2017-06-12 | 2018-12-20 | Twist Bioscience Corporation | Methods for seamless nucleic acid assembly |
| US11407837B2 (en) | 2017-09-11 | 2022-08-09 | Twist Bioscience Corporation | GPCR binding proteins and synthesis thereof |
| US11447818B2 (en) * | 2017-09-15 | 2022-09-20 | Illumina, Inc. | Universal short adapters with variable length non-random unique molecular identifiers |
| CN111565834B (zh) | 2017-10-20 | 2022-08-26 | 特韦斯特生物科学公司 | 用于多核苷酸合成的加热的纳米孔 |
| CN118126816A (zh) | 2017-11-06 | 2024-06-04 | 伊鲁米那股份有限公司 | 核酸索引化技术 |
| AU2018366213B2 (en) | 2017-11-08 | 2025-05-15 | Twinstrand Biosciences, Inc. | Reagents and adapters for nucleic acid sequencing and methods for making such reagents and adapters |
| KR102804057B1 (ko) | 2018-01-04 | 2025-05-07 | 트위스트 바이오사이언스 코포레이션 | Dna 기반 디지털 정보 저장 |
| CN108300716B (zh) * | 2018-01-05 | 2020-06-30 | 武汉康测科技有限公司 | 接头元件、其应用和基于不对称多重pcr进行靶向测序文库构建的方法 |
| CA3093846A1 (en) | 2018-03-15 | 2019-09-19 | Twinstrand Biosciences, Inc. | Methods and reagents for enrichment of nucleic acid material for sequencing applications and other nucleic acid material interrogations |
| GB201804641D0 (en) | 2018-03-22 | 2018-05-09 | Inivata Ltd | Methods of sequencing nucleic acids and error correction of sequence reads |
| EP3768853A4 (en) | 2018-03-23 | 2021-04-28 | Board Of Regents The University Of Texas System | EFFICIENT SEQUENCING OF DSDNA WITH EXTREMELY LOW ERROR RATE |
| WO2019222560A1 (en) * | 2018-05-16 | 2019-11-21 | Twinstrand Biosciences, Inc. | Methods and reagents for resolving nucleic acid mixtures and mixed cell populations and associated applications |
| CA3100739A1 (en) | 2018-05-18 | 2019-11-21 | Twist Bioscience Corporation | Polynucleotides, reagents, and methods for nucleic acid hybridization |
| BR112021000409A2 (pt) | 2018-07-12 | 2021-04-06 | Twinstrand Biosciences, Inc. | Métodos e reagentes para caracterizar edição genômica, expansão clonal e aplicações associadas |
| WO2020043803A1 (en) * | 2018-08-28 | 2020-03-05 | Sophia Genetics S.A. | Methods for asymmetric dna library generation and optionally integrated duplex sequencing |
| JP7152599B2 (ja) * | 2018-09-21 | 2022-10-12 | エフ.ホフマン-ラ ロシュ アーゲー | 塩基配列決定のためのモジュール式およびコンビナトリアル核酸試料調製のためのシステムおよび方法 |
| JP7541363B2 (ja) | 2018-10-16 | 2024-08-28 | ツインストランド・バイオサイエンシズ・インコーポレイテッド | プーリングを介した多数の試料の効率的な遺伝子型決定のための方法および試薬 |
| TWI725686B (zh) | 2018-12-26 | 2021-04-21 | 財團法人工業技術研究院 | 用於產生液珠的管狀結構及液珠產生方法 |
| WO2020139871A1 (en) | 2018-12-26 | 2020-07-02 | Twist Bioscience Corporation | Highly accurate de novo polynucleotide synthesis |
| JP2022522668A (ja) | 2019-02-26 | 2022-04-20 | ツイスト バイオサイエンス コーポレーション | 抗体を最適化するための変異体核酸ライブラリ |
| CN113766930B (zh) | 2019-02-26 | 2025-07-22 | 特韦斯特生物科学公司 | Glp1受体的变异核酸文库 |
| US11332738B2 (en) | 2019-06-21 | 2022-05-17 | Twist Bioscience Corporation | Barcode-based nucleic acid sequence assembly |
| EP4034566A4 (en) | 2019-09-23 | 2024-01-24 | Twist Bioscience Corporation | VARIANT NUCLEIC ACID BANKS FOR CRTH2 |
| JP2022548783A (ja) | 2019-09-23 | 2022-11-21 | ツイスト バイオサイエンス コーポレーション | 単一ドメイン抗体のバリアント核酸ライブラリー |
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| GB2627085B (en) | 2019-11-06 | 2024-11-13 | Univ Leland Stanford Junior | Methods and systems for analysing nucleic acid molecules |
| BR112022011235A2 (pt) | 2019-12-09 | 2022-12-13 | Twist Bioscience Corp | Bibliotecas de variantes de ácido nucleico para receptores de adenosina |
| US11783912B2 (en) | 2021-05-05 | 2023-10-10 | The Board Of Trustees Of The Leland Stanford Junior University | Methods and systems for analyzing nucleic acid molecules |
| WO2024015869A2 (en) * | 2022-07-12 | 2024-01-18 | University Of Washington | Systems and methods for variant detection in cells |
Citations (6)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US20050100900A1 (en) * | 1997-04-01 | 2005-05-12 | Manteia Sa | Method of nucleic acid amplification |
| US20120208724A1 (en) * | 2011-02-10 | 2012-08-16 | Steemers Frank J | Linking sequence reads using paired code tags |
| WO2013142389A1 (en) * | 2012-03-20 | 2013-09-26 | University Of Washington Through Its Center For Commercialization | Methods of lowering the error rate of massively parallel dna sequencing using duplex consensus sequencing |
| US20140134610A1 (en) * | 2012-01-31 | 2014-05-15 | Pacific Biosciences Of California, Inc. | Compositions and methods for selection of nucleic acids |
| CN104160040A (zh) * | 2012-03-06 | 2014-11-19 | 伊鲁米纳剑桥有限公司 | 核酸测序的改进方法 |
| WO2015100427A1 (en) * | 2013-12-28 | 2015-07-02 | Guardant Health, Inc. | Methods and systems for detecting genetic variants |
Family Cites Families (91)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US6582908B2 (en) | 1990-12-06 | 2003-06-24 | Affymetrix, Inc. | Oligonucleotides |
| US5308751A (en) | 1992-03-23 | 1994-05-03 | General Atomics | Method for sequencing double-stranded DNA |
| US6087099A (en) | 1997-09-08 | 2000-07-11 | Myriad Genetics, Inc. | Method for sequencing both strands of a double stranded DNA in a single sequencing reaction |
| CA2345441A1 (en) | 1998-10-27 | 2000-05-04 | Affymetrix, Inc. | Complexity management and analysis of genomic dna |
| US6958225B2 (en) | 1999-10-27 | 2005-10-25 | Affymetrix, Inc. | Complexity management of genomic DNA |
| US7300751B2 (en) | 2000-06-30 | 2007-11-27 | Syngenta Participations Ag | Method for identification of genetic markers |
| US6632611B2 (en) | 2001-07-20 | 2003-10-14 | Affymetrix, Inc. | Method of target enrichment and amplification |
| US7297778B2 (en) | 2001-07-25 | 2007-11-20 | Affymetrix, Inc. | Complexity management of genomic DNA |
| CA2497740C (en) | 2001-10-15 | 2011-06-21 | Bioarray Solutions, Ltd. | Multiplexed analysis of polymorphic loci by probe elongation-mediated detection |
| US7406385B2 (en) | 2001-10-25 | 2008-07-29 | Applera Corporation | System and method for consensus-calling with per-base quality values for sample assemblies |
| US7459273B2 (en) | 2002-10-04 | 2008-12-02 | Affymetrix, Inc. | Methods for genotyping selected polymorphism |
| US7452699B2 (en) | 2003-01-15 | 2008-11-18 | Dana-Farber Cancer Institute, Inc. | Amplification of DNA in a hairpin structure, and applications |
| US20040209299A1 (en) | 2003-03-07 | 2004-10-21 | Rubicon Genomics, Inc. | In vitro DNA immortalization and whole genome amplification using libraries generated from randomly fragmented DNA |
| WO2005071110A2 (en) | 2004-01-23 | 2005-08-04 | Lingvitae As | Improving polynucleotide ligation reactions |
| US7393665B2 (en) | 2005-02-10 | 2008-07-01 | Population Genetics Technologies Ltd | Methods and compositions for tagging and identifying polynucleotides |
| US8796441B2 (en) | 2005-04-13 | 2014-08-05 | The United States Of America As Represented By The Secretary Of The Department Of Health And Human Services | Human sweet and umami taste receptor variants |
| DK2302070T3 (da) | 2005-06-23 | 2012-11-26 | Keygene Nv | Strategier til identifikation og detektion af polymorfismer med højt gennemløb |
| WO2007037678A2 (en) | 2005-09-29 | 2007-04-05 | Keygene N.V. | High throughput screening of mutagenized populations |
| GB0522310D0 (en) | 2005-11-01 | 2005-12-07 | Solexa Ltd | Methods of preparing libraries of template polynucleotides |
| WO2007087312A2 (en) | 2006-01-23 | 2007-08-02 | Population Genetics Technologies Ltd. | Molecular counting |
| US20070172839A1 (en) | 2006-01-24 | 2007-07-26 | Smith Douglas R | Asymmetrical adapters and methods of use thereof |
| EP3239304B1 (en) | 2006-04-04 | 2020-08-19 | Keygene N.V. | High throughput detection of molecular markers based on aflp and high troughput sequencing |
| WO2008093098A2 (en) | 2007-02-02 | 2008-08-07 | Illumina Cambridge Limited | Methods for indexing samples and sequencing multiple nucleotide templates |
| EP2201143B2 (en) | 2007-09-21 | 2016-08-24 | Katholieke Universiteit Leuven | Tools and methods for genetic tests using next generation sequencing |
| EP4230747A3 (en) | 2008-03-28 | 2023-11-15 | Pacific Biosciences Of California, Inc. | Compositions and methods for nucleic acid sequencing |
| US8029993B2 (en) | 2008-04-30 | 2011-10-04 | Population Genetics Technologies Ltd. | Asymmetric adapter library construction |
| US8383345B2 (en) | 2008-09-12 | 2013-02-26 | University Of Washington | Sequence tag directed subassembly of short sequencing reads into long sequencing reads |
| WO2010056728A1 (en) | 2008-11-11 | 2010-05-20 | Helicos Biosciences Corporation | Nucleic acid encoding for multiplex analysis |
| EP2391732B1 (en) | 2009-01-30 | 2015-05-27 | Oxford Nanopore Technologies Limited | Methods using adaptors for nucleic acid constructs in transmembrane sequencing |
| US20100331204A1 (en) | 2009-02-13 | 2010-12-30 | Jeff Jeddeloh | Methods and systems for enrichment of target genomic sequences |
| US20120165202A1 (en) | 2009-04-30 | 2012-06-28 | Good Start Genetics, Inc. | Methods and compositions for evaluating genetic markers |
| US9085798B2 (en) | 2009-04-30 | 2015-07-21 | Prognosys Biosciences, Inc. | Nucleic acid constructs and methods of use |
| EP2248914A1 (en) | 2009-05-05 | 2010-11-10 | Max-Planck-Gesellschaft zur Förderung der Wissenschaften e.V. | The use of class IIB restriction endonucleases in 2nd generation sequencing applications |
| EP3029141A1 (en) | 2009-08-20 | 2016-06-08 | Population Genetics Technologies Ltd. | Compositions and methods for intramolecular nucleic acid rearrangement |
| US8835358B2 (en) | 2009-12-15 | 2014-09-16 | Cellular Research, Inc. | Digital counting of individual molecules by stochastic attachment of diverse labels |
| US9080210B2 (en) | 2010-06-09 | 2015-07-14 | Keygene N.V. | High throughput screening using combinatorial sequence barcodes |
| US20120244525A1 (en) * | 2010-07-19 | 2012-09-27 | New England Biolabs, Inc. | Oligonucleotide Adapters: Compositions and Methods of Use |
| WO2012012037A1 (en) | 2010-07-19 | 2012-01-26 | New England Biolabs, Inc. | Oligonucleotide adaptors: compositions and methods of use |
| ES2523140T3 (es) | 2010-09-21 | 2014-11-21 | Population Genetics Technologies Ltd. | Aumento de la confianza en las identificaciones de alelos con el recuento molecular |
| WO2012042374A2 (en) | 2010-10-01 | 2012-04-05 | Anssi Jussi Nikolai Taipale | Method of determining number or concentration of molecules |
| WO2012061832A1 (en) | 2010-11-05 | 2012-05-10 | Illumina, Inc. | Linking sequence reads using paired code tags |
| WO2012083225A2 (en) | 2010-12-16 | 2012-06-21 | Gigagen, Inc. | System and methods for massively parallel analysis of nycleic acids in single cells |
| WO2012112804A1 (en) | 2011-02-18 | 2012-08-23 | Raindance Technoligies, Inc. | Compositions and methods for molecular labeling |
| WO2012129363A2 (en) | 2011-03-24 | 2012-09-27 | President And Fellows Of Harvard College | Single cell nucleic acid detection and analysis |
| ES2986436T3 (es) | 2011-04-15 | 2024-11-11 | Univ Johns Hopkins | Sistema de secuenciación segura |
| DK2729580T3 (en) | 2011-07-08 | 2015-12-14 | Keygene Nv | SEQUENCE BASED genotyping BASED ON OLIGONUKLEOTIDLIGERINGSASSAYS |
| EP3620533B1 (en) | 2011-09-06 | 2023-01-18 | Gen-Probe Incorporated | Closed nucleic acid structures |
| AU2012304328B2 (en) | 2011-09-09 | 2017-07-20 | The Board Of Trustees Of The Leland Stanford Junior University | Methods for obtaining a sequence |
| JP5418579B2 (ja) | 2011-12-06 | 2014-02-19 | 株式会社デンソー | 開閉眼検出装置 |
| US20160153039A1 (en) | 2012-01-26 | 2016-06-02 | Nugen Technologies, Inc. | Compositions and methods for targeted nucleic acid sequence enrichment and high efficiency library generation |
| EP2807292B1 (en) | 2012-01-26 | 2019-05-22 | Tecan Genomics, Inc. | Compositions and methods for targeted nucleic acid sequence enrichment and high efficiency library generation |
| WO2013123442A1 (en) | 2012-02-17 | 2013-08-22 | Fred Hutchinson Cancer Research Center | Compositions and methods for accurately identifying mutations |
| EP2820174B1 (en) | 2012-02-27 | 2019-12-25 | The University of North Carolina at Chapel Hill | Methods and uses for molecular tags |
| WO2013128281A1 (en) | 2012-02-28 | 2013-09-06 | Population Genetics Technologies Ltd | Method for attaching a counter sequence to a nucleic acid sample |
| WO2013138510A1 (en) | 2012-03-13 | 2013-09-19 | Patel Abhijit Ajit | Measurement of nucleic acid variants using highly-multiplexed error-suppressed deep sequencing |
| EP2847353B1 (en) | 2012-05-10 | 2022-01-19 | The General Hospital Corporation | Methods for determining a nucleotide sequence |
| AU2013267609C1 (en) | 2012-05-31 | 2019-01-03 | Board Of Regents, The University Of Texas System | Method for accurate sequencing of DNA |
| US20160040229A1 (en) | 2013-08-16 | 2016-02-11 | Guardant Health, Inc. | Systems and methods to detect rare mutations and copy number variation |
| CN104781421B (zh) | 2012-09-04 | 2020-06-05 | 夸登特健康公司 | 检测稀有突变和拷贝数变异的系统和方法 |
| CN102877136B (zh) * | 2012-09-24 | 2014-03-12 | 上海交通大学 | 基于基因组简化与二代测序dna文库构建方法及试剂盒 |
| DK2970951T3 (da) * | 2013-03-13 | 2019-05-13 | Illumina Inc | Fremgangsmåder til nukleinsyresekventering |
| US9290800B2 (en) * | 2013-03-15 | 2016-03-22 | Pacific Biosciences Of California, Inc. | Targeted rolling circle amplification |
| US10087481B2 (en) * | 2013-03-19 | 2018-10-02 | New England Biolabs, Inc. | Enrichment of target sequences |
| US9873907B2 (en) | 2013-05-29 | 2018-01-23 | Agilent Technologies, Inc. | Method for fragmenting genomic DNA using CAS9 |
| KR102348283B1 (ko) * | 2013-09-24 | 2022-01-10 | 소마로직, 인크. | 멀티앱타머 표적 검출 |
| EP3363904B1 (en) | 2014-01-31 | 2019-10-23 | Swift Biosciences, Inc. | Improved methods for processing dna substrates |
| CN107075730A (zh) | 2014-09-12 | 2017-08-18 | 利兰·斯坦福青年大学托管委员会 | 循环核酸的鉴定及用途 |
| US11149305B2 (en) | 2015-01-23 | 2021-10-19 | Washington University | Detection of rare sequence variants, methods and compositions therefor |
| WO2016133044A1 (ja) | 2015-02-20 | 2016-08-25 | 日本電気株式会社 | 受信装置、受信方法 |
| US10844428B2 (en) | 2015-04-28 | 2020-11-24 | Illumina, Inc. | Error suppression in sequenced DNA fragments using redundant reads with unique molecular indices (UMIS) |
| EP3307908B1 (en) | 2015-06-09 | 2019-09-11 | Life Technologies Corporation | Methods for molecular tagging |
| US10465241B2 (en) | 2015-06-15 | 2019-11-05 | The Board Of Trustees Of The Leleand Stanford Junior University | High resolution STR analysis using next generation sequencing |
| GB201515557D0 (en) | 2015-09-02 | 2015-10-14 | 14M Genomics Ltd | Method of sequencing |
| EP3377656B1 (en) | 2015-11-18 | 2025-07-02 | Pacific Biosciences of California, Inc. | Loading nucleic acids onto substrates |
| CA3006792A1 (en) | 2015-12-08 | 2017-06-15 | Twinstrand Biosciences, Inc. | Improved adapters, methods, and compositions for duplex sequencing |
| EP3405574A4 (en) | 2016-01-22 | 2019-10-02 | Grail, Inc. | VARIANTS-BASED SICKNESS DIAGNOSTICS AND PURSUIT |
| WO2017127741A1 (en) | 2016-01-22 | 2017-07-27 | Grail, Inc. | Methods and systems for high fidelity sequencing |
| US11821028B2 (en) | 2016-07-12 | 2023-11-21 | QIAGEN Sciences, LLP | Single end duplex DNA sequencing |
| EP3276328B1 (en) | 2016-07-29 | 2020-12-02 | Sysmex Corporation | Smear transporting apparatus, smear image capture system, and smear analysis system |
| WO2018031588A1 (en) | 2016-08-09 | 2018-02-15 | Takara Bio Usa, Inc. | Nucleic acid adaptors with molecular identification sequences and use thereof |
| WO2018057928A1 (en) | 2016-09-23 | 2018-03-29 | Grail, Inc. | Methods of preparing and analyzing cell-free nucleic acid sequencing libraries |
| WO2018119399A1 (en) | 2016-12-23 | 2018-06-28 | Grail, Inc. | Methods for high efficiency library preparation using double-stranded adapters |
| IL269431B2 (en) | 2017-03-23 | 2025-05-01 | Univ Washington | Methods for targeted nucleic acid sequence enrichment with applications to error corrected nucleic acid sequencing |
| WO2018183942A1 (en) | 2017-03-31 | 2018-10-04 | Grail, Inc. | Improved library preparation and use thereof for sequencing-based error correction and/or variant identification |
| AU2018366213B2 (en) | 2017-11-08 | 2025-05-15 | Twinstrand Biosciences, Inc. | Reagents and adapters for nucleic acid sequencing and methods for making such reagents and adapters |
| BR112020016516A2 (pt) | 2018-02-13 | 2020-12-15 | Twinstrand Biosciences, Inc. | Métodos e reagentes para detectar e avaliar a genotoxicidade |
| CA3093846A1 (en) | 2018-03-15 | 2019-09-19 | Twinstrand Biosciences, Inc. | Methods and reagents for enrichment of nucleic acid material for sequencing applications and other nucleic acid material interrogations |
| EP3768853A4 (en) | 2018-03-23 | 2021-04-28 | Board Of Regents The University Of Texas System | EFFICIENT SEQUENCING OF DSDNA WITH EXTREMELY LOW ERROR RATE |
| WO2019222560A1 (en) | 2018-05-16 | 2019-11-21 | Twinstrand Biosciences, Inc. | Methods and reagents for resolving nucleic acid mixtures and mixed cell populations and associated applications |
| BR112021000409A2 (pt) | 2018-07-12 | 2021-04-06 | Twinstrand Biosciences, Inc. | Métodos e reagentes para caracterizar edição genômica, expansão clonal e aplicações associadas |
| KR102662200B1 (ko) | 2019-07-15 | 2024-04-29 | 엘지디스플레이 주식회사 | 유기발광표시장치 |
-
2016
- 2016-12-08 CA CA3006792A patent/CA3006792A1/en active Pending
- 2016-12-08 WO PCT/US2016/065605 patent/WO2017100441A1/en not_active Ceased
- 2016-12-08 PT PT168228328T patent/PT3387152T/pt unknown
- 2016-12-08 AU AU2016366231A patent/AU2016366231B2/en active Active
- 2016-12-08 JP JP2018530698A patent/JP6975507B2/ja active Active
- 2016-12-08 ES ES16822832T patent/ES2911421T3/es active Active
- 2016-12-08 EP EP21217292.8A patent/EP4043584A1/en active Pending
- 2016-12-08 PL PL16822832T patent/PL3387152T3/pl unknown
- 2016-12-08 EP EP16822832.8A patent/EP3387152B1/en active Active
- 2016-12-08 US US15/372,761 patent/US11332784B2/en active Active
- 2016-12-08 CN CN201680080120.4A patent/CN109072294A/zh active Pending
-
2018
- 2018-06-03 IL IL259788A patent/IL259788B2/en unknown
-
2021
- 2021-11-02 JP JP2021179334A patent/JP7548579B2/ja active Active
-
2022
- 2022-04-12 US US17/719,147 patent/US20220267841A1/en not_active Abandoned
-
2023
- 2023-10-27 JP JP2023184524A patent/JP2024010122A/ja active Pending
-
2025
- 2025-03-21 US US19/087,128 patent/US20250313888A1/en active Pending
Patent Citations (6)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US20050100900A1 (en) * | 1997-04-01 | 2005-05-12 | Manteia Sa | Method of nucleic acid amplification |
| US20120208724A1 (en) * | 2011-02-10 | 2012-08-16 | Steemers Frank J | Linking sequence reads using paired code tags |
| US20140134610A1 (en) * | 2012-01-31 | 2014-05-15 | Pacific Biosciences Of California, Inc. | Compositions and methods for selection of nucleic acids |
| CN104160040A (zh) * | 2012-03-06 | 2014-11-19 | 伊鲁米纳剑桥有限公司 | 核酸测序的改进方法 |
| WO2013142389A1 (en) * | 2012-03-20 | 2013-09-26 | University Of Washington Through Its Center For Commercialization | Methods of lowering the error rate of massively parallel dna sequencing using duplex consensus sequencing |
| WO2015100427A1 (en) * | 2013-12-28 | 2015-07-02 | Guardant Health, Inc. | Methods and systems for detecting genetic variants |
Cited By (3)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| CN113728100A (zh) * | 2019-02-25 | 2021-11-30 | 特韦斯特生物科学公司 | 用于下一代测序的组合物和方法 |
| CN114502742A (zh) * | 2019-08-01 | 2022-05-13 | 特温斯特兰德生物科学有限公司 | 用于核酸测序及相关应用的方法和试剂 |
| WO2024022207A1 (en) * | 2022-07-25 | 2024-02-01 | Mgi Tech Co., Ltd. | Methods of in-solution positional co-barcoding for sequencing long dna molecules |
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| AU2016366231A1 (en) | 2018-06-14 |
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| AU2016366231B2 (en) | 2022-12-15 |
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