DK3436607T3 - Indfangning af koblede dupleksmål - Google Patents
Indfangning af koblede dupleksmål Download PDFInfo
- Publication number
- DK3436607T3 DK3436607T3 DK17773408.4T DK17773408T DK3436607T3 DK 3436607 T3 DK3436607 T3 DK 3436607T3 DK 17773408 T DK17773408 T DK 17773408T DK 3436607 T3 DK3436607 T3 DK 3436607T3
- Authority
- DK
- Denmark
- Prior art keywords
- capture
- duplex targets
- coupled
- coupled duplex
- targets
- Prior art date
Links
Classifications
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6844—Nucleic acid amplification reactions
- C12Q1/6853—Nucleic acid amplification reactions using modified primers or templates
- C12Q1/6855—Ligating adaptors
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6806—Preparing nucleic acids for analysis, e.g. for polymerase chain reaction [PCR] assay
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6844—Nucleic acid amplification reactions
- C12Q1/686—Polymerase chain reaction [PCR]
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6869—Methods for sequencing
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6869—Methods for sequencing
- C12Q1/6874—Methods for sequencing involving nucleic acid arrays, e.g. sequencing by hybridisation
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
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- C—CHEMISTRY; METALLURGY
- C40—COMBINATORIAL TECHNOLOGY
- C40B—COMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
- C40B20/00—Methods specially adapted for identifying library members
- C40B20/04—Identifying library members by means of a tag, label, or other readable or detectable entity associated with the library members, e.g. decoding processes
-
- C—CHEMISTRY; METALLURGY
- C40—COMBINATORIAL TECHNOLOGY
- C40B—COMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
- C40B40/00—Libraries per se, e.g. arrays, mixtures
- C40B40/04—Libraries containing only organic compounds
- C40B40/06—Libraries containing nucleotides or polynucleotides, or derivatives thereof
- C40B40/08—Libraries containing RNA or DNA which encodes proteins, e.g. gene libraries
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6844—Nucleic acid amplification reactions
- C12Q1/6853—Nucleic acid amplification reactions using modified primers or templates
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/16—Primer sets for multiplex assays
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/166—Oligonucleotides used as internal standards, controls or normalisation probes
Landscapes
- Chemical & Material Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Organic Chemistry (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Health & Medical Sciences (AREA)
- Engineering & Computer Science (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Molecular Biology (AREA)
- Analytical Chemistry (AREA)
- Biochemistry (AREA)
- General Health & Medical Sciences (AREA)
- Genetics & Genomics (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Immunology (AREA)
- Microbiology (AREA)
- Biotechnology (AREA)
- Bioinformatics & Cheminformatics (AREA)
- General Engineering & Computer Science (AREA)
- Physics & Mathematics (AREA)
- Biophysics (AREA)
- General Chemical & Material Sciences (AREA)
- Medicinal Chemistry (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Lubricants (AREA)
Applications Claiming Priority (4)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US201662313974P | 2016-03-28 | 2016-03-28 | |
| US201662359468P | 2016-07-07 | 2016-07-07 | |
| US201662409633P | 2016-10-18 | 2016-10-18 | |
| PCT/IB2017/051779 WO2017168332A1 (en) | 2016-03-28 | 2017-03-28 | Linked duplex target capture |
Publications (2)
| Publication Number | Publication Date |
|---|---|
| DK3436607T3 true DK3436607T3 (da) | 2023-07-10 |
| DK3436607T5 DK3436607T5 (da) | 2024-09-16 |
Family
ID=59962675
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| DK17773408.4T DK3436607T5 (da) | 2016-03-28 | 2017-03-28 | Indfangning af koblede dupleksmål |
Country Status (6)
| Country | Link |
|---|---|
| US (3) | US10801059B2 (da) |
| EP (2) | EP3436607B1 (da) |
| JP (3) | JP7086855B2 (da) |
| DK (1) | DK3436607T5 (da) |
| ES (1) | ES2952832T3 (da) |
| WO (3) | WO2017168331A1 (da) |
Families Citing this family (25)
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| US10000799B2 (en) | 2014-11-04 | 2018-06-19 | Boreal Genomics, Inc. | Methods of sequencing with linked fragments |
| WO2017168331A1 (en) | 2016-03-28 | 2017-10-05 | Boreal Genomics, Inc. | Linked duplex fragment sequencing |
| US10961573B2 (en) | 2016-03-28 | 2021-03-30 | Boreal Genomics, Inc. | Linked duplex target capture |
| JP7048609B2 (ja) | 2016-12-09 | 2022-04-05 | ボリアル ジェノミクス， インコーポレイテッド | 連結型ライゲーション |
| CN108060191B (zh) * | 2017-11-07 | 2021-05-04 | 深圳华大智造科技股份有限公司 | 一种双链核酸片段加接头的方法、文库构建方法和试剂盒 |
| US11976275B2 (en) * | 2018-06-15 | 2024-05-07 | Kapa Biosystems, Inc. | Generation of double-stranded DNA templates for single molecule sequencing |
| US12098419B2 (en) | 2018-08-23 | 2024-09-24 | Ncan Genomics, Inc. | Linked target capture and ligation |
| CN111378728A (zh) * | 2018-12-31 | 2020-07-07 | 新格元(南京)生物科技有限公司 | 一种带分子标签引物序列的磁珠及其制备方法 |
| EP4538389A3 (en) * | 2019-01-03 | 2025-07-30 | Ncan Genomics, Inc. | Linked target capture |
| CN113795592A (zh) * | 2019-03-12 | 2021-12-14 | 领先细胞医疗诊断有限公司 | 双链核酸的原位检测及其相关方法 |
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| CA3140171A1 (en) * | 2019-06-10 | 2020-12-17 | Boreal Genomics, Inc. | Linked target capture |
| US10927409B1 (en) * | 2019-10-14 | 2021-02-23 | Pioneer Hi-Bred International, Inc. | Detection of sequences uniquely associated with a dna target region |
| US20220315997A1 (en) * | 2021-04-05 | 2022-10-06 | Ncan Genomics, Inc. | Enhanced linked target capture |
| WO2022232308A1 (en) | 2021-04-27 | 2022-11-03 | Singular Genomics Systems, Inc. | High density sequencing and multiplexed priming |
| CN114807334A (zh) * | 2022-05-31 | 2022-07-29 | 深圳联合医学科技有限公司 | 目标基因的检测方法、引物组、试剂盒及应用 |
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| US10000799B2 (en) * | 2014-11-04 | 2018-06-19 | Boreal Genomics, Inc. | Methods of sequencing with linked fragments |
| US11060131B2 (en) | 2015-03-25 | 2021-07-13 | Angle Europe Limited | Solid phase nucleic acid target capture and replication using strand displacing polymerases |
| WO2017168331A1 (en) | 2016-03-28 | 2017-10-05 | Boreal Genomics, Inc. | Linked duplex fragment sequencing |
-
2017
- 2017-03-28 WO PCT/IB2017/051778 patent/WO2017168331A1/en not_active Ceased
- 2017-03-28 US US16/088,714 patent/US10801059B2/en active Active
- 2017-03-28 US US16/088,720 patent/US10961568B2/en active Active
- 2017-03-28 US US16/088,717 patent/US11021742B2/en active Active
- 2017-03-28 WO PCT/IB2017/051779 patent/WO2017168332A1/en not_active Ceased
- 2017-03-28 DK DK17773408.4T patent/DK3436607T5/da active
- 2017-03-28 ES ES17773408T patent/ES2952832T3/es active Active
- 2017-03-28 EP EP17773408.4A patent/EP3436607B1/en active Active
- 2017-03-28 EP EP23178745.8A patent/EP4282974A3/en active Pending
- 2017-03-28 WO PCT/IB2017/051776 patent/WO2017168329A1/en not_active Ceased
- 2017-03-28 JP JP2018552001A patent/JP7086855B2/ja active Active
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2022
- 2022-06-03 JP JP2022090756A patent/JP7532444B2/ja active Active
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2024
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Also Published As
| Publication number | Publication date |
|---|---|
| EP4282974A3 (en) | 2024-03-13 |
| CA3019367A1 (en) | 2017-10-05 |
| DK3436607T5 (da) | 2024-09-16 |
| JP2022119967A (ja) | 2022-08-17 |
| WO2017168332A1 (en) | 2017-10-05 |
| EP3436607B1 (en) | 2023-06-14 |
| JP7532444B2 (ja) | 2024-08-13 |
| WO2017168331A1 (en) | 2017-10-05 |
| US10801059B2 (en) | 2020-10-13 |
| US20190106729A1 (en) | 2019-04-11 |
| WO2017168329A1 (en) | 2017-10-05 |
| ES2952832T3 (es) | 2023-11-06 |
| US20190127788A1 (en) | 2019-05-02 |
| JP7086855B2 (ja) | 2022-06-20 |
| US11021742B2 (en) | 2021-06-01 |
| EP4282974A2 (en) | 2023-11-29 |
| JP2019514357A (ja) | 2019-06-06 |
| US10961568B2 (en) | 2021-03-30 |
| JP2024156807A (ja) | 2024-11-06 |
| EP3436607A1 (en) | 2019-02-06 |
| EP3436607A4 (en) | 2019-10-30 |
| US20190112654A1 (en) | 2019-04-18 |
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