NL9301957A - Werkwijze voor het identificeren van micro-organismen, en daarvoor bruikbare hulpmiddelen. - Google Patents

Werkwijze voor het identificeren van micro-organismen, en daarvoor bruikbare hulpmiddelen. Download PDF

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Publication number
NL9301957A
NL9301957A NL9301957A NL9301957A NL9301957A NL 9301957 A NL9301957 A NL 9301957A NL 9301957 A NL9301957 A NL 9301957A NL 9301957 A NL9301957 A NL 9301957A NL 9301957 A NL9301957 A NL 9301957A
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NL
Netherlands
Prior art keywords
nucleic acid
primers
amplification
dna
electrophoresis
Prior art date
Application number
NL9301957A
Other languages
English (en)
Dutch (nl)
Original Assignee
U Gene Research Bv
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by U Gene Research Bv filed Critical U Gene Research Bv
Priority to NL9301957A priority Critical patent/NL9301957A/nl
Priority to PCT/NL1994/000283 priority patent/WO1995013396A2/fr
Publication of NL9301957A publication Critical patent/NL9301957A/nl

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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844Nucleic acid amplification reactions
    • C12Q1/6858Allele-specific amplification
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6827Hybridisation assays for detection of mutation or polymorphism
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844Nucleic acid amplification reactions
    • C12Q1/686Polymerase chain reaction [PCR]
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6888Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
    • C12Q1/689Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms for bacteria
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/16Primer sets for multiplex assays

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Analytical Chemistry (AREA)
  • Biophysics (AREA)
  • Immunology (AREA)
  • Microbiology (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Physics & Mathematics (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
NL9301957A 1993-11-11 1993-11-11 Werkwijze voor het identificeren van micro-organismen, en daarvoor bruikbare hulpmiddelen. NL9301957A (nl)

Priority Applications (2)

Application Number Priority Date Filing Date Title
NL9301957A NL9301957A (nl) 1993-11-11 1993-11-11 Werkwijze voor het identificeren van micro-organismen, en daarvoor bruikbare hulpmiddelen.
PCT/NL1994/000283 WO1995013396A2 (fr) 1993-11-11 1994-11-11 Procede d'identification de micro-organismes, et dispositifs pour sa mise en oeuvre

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
NL9301957 1993-11-11
NL9301957A NL9301957A (nl) 1993-11-11 1993-11-11 Werkwijze voor het identificeren van micro-organismen, en daarvoor bruikbare hulpmiddelen.

Publications (1)

Publication Number Publication Date
NL9301957A true NL9301957A (nl) 1995-06-01

Family

ID=19863128

Family Applications (1)

Application Number Title Priority Date Filing Date
NL9301957A NL9301957A (nl) 1993-11-11 1993-11-11 Werkwijze voor het identificeren van micro-organismen, en daarvoor bruikbare hulpmiddelen.

Country Status (2)

Country Link
NL (1) NL9301957A (fr)
WO (1) WO1995013396A2 (fr)

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US6593086B2 (en) 1996-05-20 2003-07-15 Mount Sinai School Of Medicine Of New York University Nucleic acid amplification methods
USRE38442E1 (en) * 1994-06-22 2004-02-24 Mount Sinai School Of Medicine Nucleic acid amplification method hybridization signal amplification method (HSAM)
US5876924A (en) * 1994-06-22 1999-03-02 Mount Sinai School Of Medicine Nucleic acid amplification method hybridization signal amplification method (HSAM)
GB9420774D0 (en) * 1994-10-14 1994-11-30 Univ Wales Method of detecting and identifying spore forming bacteria
DE19716456C2 (de) * 1997-04-21 2002-05-08 Schmitt Heinz Josef Verwendung einer Kombination von Primern zum Nachweis von Erregern von Infektionskrankheiten
GB9719044D0 (en) * 1997-09-08 1997-11-12 Inst Of Ophthalmology Assay
EP1044284A2 (fr) * 1998-01-08 2000-10-18 Merck Sharp & Dohme de Espana S.A.E. Sondes d'hybridation pouvant faire la differenciation entre le groupe de bacteries actinomadura madurae et les bacteries maduromycetes
AU5062500A (en) * 1999-04-26 2000-11-10 Amersham Pharmacia Biotech Ab Primers for identifying typing or classifying nucleic acids
DE19945916A1 (de) * 1999-09-24 2001-04-05 Biotecon Diagnostics Gmbh Nukleinsäuremoleküle zum Nachweis von Bakterien und phylogenetischen Einheiten von Bakterien
WO2001023608A2 (fr) * 1999-09-27 2001-04-05 Merck Sharp & Dohme De Espana, S.A.E. Sondes d'hybridation permettant de detecter de maniere specifique des souches du genre microbispora, microtetraspora, nonomuria et planobispora
DE10027113A1 (de) 1999-12-23 2001-09-27 Andreas Hoeft Verfahren zur Bestimmung von mikrobieller DNS/RNS, Kit dafür und Verwendung des Verfahrens
US7666588B2 (en) 2001-03-02 2010-02-23 Ibis Biosciences, Inc. Methods for rapid forensic analysis of mitochondrial DNA and characterization of mitochondrial DNA heteroplasmy
WO2004060278A2 (fr) 2002-12-06 2004-07-22 Isis Pharmaceuticals, Inc. Procedes d'identification rapide de pathogenes chez l'homme et les betes
US20040121309A1 (en) 2002-12-06 2004-06-24 Ecker David J. Methods for rapid detection and identification of bioagents in blood, bodily fluids, and bodily tissues
AU2013231102B2 (en) * 2001-03-02 2016-04-28 Ibis Biosciences, Inc. Methods for rapid identification of pathogens in humans and animals
US20030027135A1 (en) 2001-03-02 2003-02-06 Ecker David J. Method for rapid detection and identification of bioagents
US7226739B2 (en) 2001-03-02 2007-06-05 Isis Pharmaceuticals, Inc Methods for rapid detection and identification of bioagents in epidemiological and forensic investigations
US7217510B2 (en) * 2001-06-26 2007-05-15 Isis Pharmaceuticals, Inc. Methods for providing bacterial bioagent characterizing information
US8057993B2 (en) 2003-04-26 2011-11-15 Ibis Biosciences, Inc. Methods for identification of coronaviruses
US8158354B2 (en) 2003-05-13 2012-04-17 Ibis Biosciences, Inc. Methods for rapid purification of nucleic acids for subsequent analysis by mass spectrometry by solution capture
US7964343B2 (en) 2003-05-13 2011-06-21 Ibis Biosciences, Inc. Method for rapid purification of nucleic acids for subsequent analysis by mass spectrometry by solution capture
US7205111B2 (en) * 2003-07-24 2007-04-17 Marshfield Clinic Rapid identification of bacteria from positive blood cultures
US8546082B2 (en) 2003-09-11 2013-10-01 Ibis Biosciences, Inc. Methods for identification of sepsis-causing bacteria
US8097416B2 (en) 2003-09-11 2012-01-17 Ibis Biosciences, Inc. Methods for identification of sepsis-causing bacteria
US8242254B2 (en) 2003-09-11 2012-08-14 Ibis Biosciences, Inc. Compositions for use in identification of bacteria
US8163895B2 (en) 2003-12-05 2012-04-24 Ibis Biosciences, Inc. Compositions for use in identification of orthopoxviruses
US7666592B2 (en) 2004-02-18 2010-02-23 Ibis Biosciences, Inc. Methods for concurrent identification and quantification of an unknown bioagent
ES2641832T3 (es) 2004-05-24 2017-11-14 Ibis Biosciences, Inc. Espectrometría de masas con filtración de iones selectiva por establecimiento de umbrales digitales
US20050266411A1 (en) 2004-05-25 2005-12-01 Hofstadler Steven A Methods for rapid forensic analysis of mitochondrial DNA
US7811753B2 (en) 2004-07-14 2010-10-12 Ibis Biosciences, Inc. Methods for repairing degraded DNA
US7309589B2 (en) * 2004-08-20 2007-12-18 Vironix Llc Sensitive detection of bacteria by improved nested polymerase chain reaction targeting the 16S ribosomal RNA gene and identification of bacterial species by amplicon sequencing
US8084207B2 (en) 2005-03-03 2011-12-27 Ibis Bioscience, Inc. Compositions for use in identification of papillomavirus
US20060205040A1 (en) 2005-03-03 2006-09-14 Rangarajan Sampath Compositions for use in identification of adventitious viruses
EP1904655A2 (fr) 2005-07-21 2008-04-02 Isis Pharmaceuticals, Inc. Procedes pour l'identification et la quantification rapide de variants d'acide nucleique
EP2010679A2 (fr) 2006-04-06 2009-01-07 Ibis Biosciences, Inc. Compositions pour l'identification de champignons
AU2007353877B2 (en) 2006-09-14 2012-07-19 Ibis Biosciences, Inc. Targeted whole genome amplification method for identification of pathogens
JP5680304B2 (ja) 2007-02-23 2015-03-04 アイビス バイオサイエンシズ インコーポレイティッド 迅速な法医学的dna分析法
US9598724B2 (en) 2007-06-01 2017-03-21 Ibis Biosciences, Inc. Methods and compositions for multiple displacement amplification of nucleic acids
EP2349549B1 (fr) 2008-09-16 2012-07-18 Ibis Biosciences, Inc. Cartouches de mélange, postes de mélange et kits, et système associé
WO2010033627A2 (fr) 2008-09-16 2010-03-25 Ibis Biosciences, Inc. Unités de traitement d'échantillons, systèmes et procédés associés
US8534447B2 (en) 2008-09-16 2013-09-17 Ibis Biosciences, Inc. Microplate handling systems and related computer program products and methods
EP2396803A4 (fr) 2009-02-12 2016-10-26 Ibis Biosciences Inc Ensembles sonde d'ionisation
US9719083B2 (en) 2009-03-08 2017-08-01 Ibis Biosciences, Inc. Bioagent detection methods
US9393564B2 (en) 2009-03-30 2016-07-19 Ibis Biosciences, Inc. Bioagent detection systems, devices, and methods
US8950604B2 (en) 2009-07-17 2015-02-10 Ibis Biosciences, Inc. Lift and mount apparatus
EP2454000A4 (fr) 2009-07-17 2016-08-10 Ibis Biosciences Inc Systèmes pour l'identification d'un bioagent
WO2011014811A1 (fr) 2009-07-31 2011-02-03 Ibis Biosciences, Inc. Amorces de capture et supports solides liés à une séquence de capture pour tests diagnostiques moléculaires
EP3098325A1 (fr) 2009-08-06 2016-11-30 Ibis Biosciences, Inc. Compositions de base déterminée sans masse pour la détection d'acide nucléique
EP2957641B1 (fr) 2009-10-15 2017-05-17 Ibis Biosciences, Inc. Amplification de déplacement multiple
WO2011048227A1 (fr) * 2009-10-22 2011-04-28 Biotools Biotechnological & Medical Laboratories, S.A. Composition, méthode et trousse pour la détection de bactéries par séquençage
US9758840B2 (en) 2010-03-14 2017-09-12 Ibis Biosciences, Inc. Parasite detection via endosymbiont detection
JP5399312B2 (ja) * 2010-04-26 2014-01-29 日東電工株式会社 粘着シート
WO2016164407A2 (fr) 2015-04-07 2016-10-13 Polyskope Labs Détection d'un ou de plusieurs agents pathogènes
WO2020190795A1 (fr) * 2019-03-15 2020-09-24 Polyskope Labs Bouillon d'enrichissement sélectif pour la détection d'un ou plusieurs agents pathogènes

Citations (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO1990001560A1 (fr) * 1988-07-29 1990-02-22 David John Evans Sonde d'adn bacterienne
WO1990015157A1 (fr) * 1989-05-31 1990-12-13 Gene-Trak Systems Sondes d'acides nucleiques eubacteriennes universelles et procede
EP0479117A1 (fr) * 1990-10-05 1992-04-08 F. Hoffmann-La Roche Ag Méthodes et réactifs pour l'identification bactérienne
WO1993005179A1 (fr) * 1991-08-29 1993-03-18 THE UNITED STATES OF AMERICA, represented by THE SECRETARY, DEPARTMENT OF HEALTH AND HUMAN SERVICES:National Institutes of Health Procede de discrimination et d'identification d'alleles dans des loci complexes

Patent Citations (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO1990001560A1 (fr) * 1988-07-29 1990-02-22 David John Evans Sonde d'adn bacterienne
WO1990015157A1 (fr) * 1989-05-31 1990-12-13 Gene-Trak Systems Sondes d'acides nucleiques eubacteriennes universelles et procede
EP0479117A1 (fr) * 1990-10-05 1992-04-08 F. Hoffmann-La Roche Ag Méthodes et réactifs pour l'identification bactérienne
WO1993005179A1 (fr) * 1991-08-29 1993-03-18 THE UNITED STATES OF AMERICA, represented by THE SECRETARY, DEPARTMENT OF HEALTH AND HUMAN SERVICES:National Institutes of Health Procede de discrimination et d'identification d'alleles dans des loci complexes

Non-Patent Citations (2)

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Title
G. SARKAR ET AL.: "Screening for mutations by RNA single-strand conformation polymorphism (rSSCP): comparison with DNA-SSCP", NUCL. ACIDS RES., vol. 20, no. 4, 25 February 1992 (1992-02-25), IRL PRESS, OXFORD, ENGLAND;, pages 871 - 878 *
K. CHEN ET AL.: "Broad range DNA probes for detecting and amplifying eubacterial nucleic acids", FEMS MICROBIOLGY LETTERS, vol. 57, no. 1, January 1989 (1989-01-01), ELSEVIER, AMSTERDAM, NL;, pages 19 - 24 *

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Publication number Publication date
WO1995013396A2 (fr) 1995-05-18
WO1995013396A3 (fr) 1995-06-08

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