ATE432981T1 - Multi-stellen-mutagenese - Google Patents
Multi-stellen-mutageneseInfo
- Publication number
- ATE432981T1 ATE432981T1 AT02798908T AT02798908T ATE432981T1 AT E432981 T1 ATE432981 T1 AT E432981T1 AT 02798908 T AT02798908 T AT 02798908T AT 02798908 T AT02798908 T AT 02798908T AT E432981 T1 ATE432981 T1 AT E432981T1
- Authority
- AT
- Austria
- Prior art keywords
- present
- transformants
- mutagenesis
- compositions
- pef
- Prior art date
Links
- 231100000350 mutagenesis Toxicity 0.000 title abstract 2
- 238000002703 mutagenesis Methods 0.000 title abstract 2
- 238000000034 method Methods 0.000 abstract 2
- 239000000203 mixture Substances 0.000 abstract 2
- 102000004150 Flap endonucleases Human genes 0.000 abstract 1
- 108090000652 Flap endonucleases Proteins 0.000 abstract 1
- 238000010276 construction Methods 0.000 abstract 1
- 230000001351 cycling effect Effects 0.000 abstract 1
- 230000036438 mutation frequency Effects 0.000 abstract 1
- 231100000376 mutation frequency increase Toxicity 0.000 abstract 1
- 238000012216 screening Methods 0.000 abstract 1
- 238000002741 site-directed mutagenesis Methods 0.000 abstract 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
- C12N15/102—Mutagenizing nucleic acids
- C12N15/1027—Mutagenizing nucleic acids by DNA shuffling, e.g. RSR, STEP, RPR
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
- C12N15/102—Mutagenizing nucleic acids
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/10—Transferases (2.)
- C12N9/12—Transferases (2.) transferring phosphorus containing groups, e.g. kinases (2.7)
- C12N9/1241—Nucleotidyltransferases (2.7.7)
- C12N9/1252—DNA-directed DNA polymerase (2.7.7.7), i.e. DNA replicase
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/14—Hydrolases (3)
- C12N9/16—Hydrolases (3) acting on ester bonds (3.1)
- C12N9/22—Ribonucleases [RNase]; Deoxyribonucleases [DNase]
Landscapes
- Health & Medical Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Chemical & Material Sciences (AREA)
- Genetics & Genomics (AREA)
- Engineering & Computer Science (AREA)
- Zoology (AREA)
- Organic Chemistry (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Wood Science & Technology (AREA)
- General Engineering & Computer Science (AREA)
- Biomedical Technology (AREA)
- Biotechnology (AREA)
- Molecular Biology (AREA)
- Microbiology (AREA)
- Biochemistry (AREA)
- General Health & Medical Sciences (AREA)
- Crystallography & Structural Chemistry (AREA)
- Physics & Mathematics (AREA)
- Biophysics (AREA)
- Plant Pathology (AREA)
- Medicinal Chemistry (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Micro-Organisms Or Cultivation Processes Thereof (AREA)
- Enzymes And Modification Thereof (AREA)
- Pharmaceuticals Containing Other Organic And Inorganic Compounds (AREA)
Applications Claiming Priority (2)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US30792701P | 2001-07-26 | 2001-07-26 | |
| PCT/US2002/022759 WO2003025118A2 (en) | 2001-07-26 | 2002-07-18 | Multi-site mutagenesis |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| ATE432981T1 true ATE432981T1 (de) | 2009-06-15 |
Family
ID=23191773
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| AT02798908T ATE432981T1 (de) | 2001-07-26 | 2002-07-18 | Multi-stellen-mutagenese |
Country Status (7)
| Country | Link |
|---|---|
| US (2) | US8067556B2 (de) |
| EP (1) | EP1417327B1 (de) |
| JP (1) | JP4473573B2 (de) |
| AT (1) | ATE432981T1 (de) |
| CA (1) | CA2454319A1 (de) |
| DE (1) | DE60232523D1 (de) |
| WO (1) | WO2003025118A2 (de) |
Families Citing this family (70)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| EP1281757A1 (de) * | 2001-07-31 | 2003-02-05 | Direvo Biotech AG | Methode zur Herstellung von Nukleinsäuren mit stochastisch kombinierten Abschnitten von Ausgangsnukleinsäuren |
| WO2005017173A1 (en) * | 2003-07-29 | 2005-02-24 | Sigma Aldrich Co. | Methods and compositions for amplification of dna |
| US20060024714A1 (en) * | 2004-06-30 | 2006-02-02 | Applera Corporation | Compositions and methods for detecting and quantitating polynucleotide sequences |
| AU2007234569C1 (en) * | 2006-08-15 | 2008-05-29 | Commonwealth Scientific And Industrial Research Organisation | Reassortment by fragment ligation |
| US20080213841A1 (en) * | 2006-08-21 | 2008-09-04 | Pondicherry Biotech Private Limited | Novel Method for Assembling DNA Metasegments to use as Substrates for Homologous Recombination in a Cell |
| US20080124768A1 (en) * | 2006-10-31 | 2008-05-29 | Sigma Aldrich Co. | Methods and Compositions for Amplification of DNA |
| JP6014805B2 (ja) | 2007-07-31 | 2016-10-26 | ビーエーエスエフ エンザイムズ エルエルシー | テイラードマルチサイトコンビナトリアルアセンブリー |
| US8927218B2 (en) | 2011-06-27 | 2015-01-06 | Flir Systems, Inc. | Methods and compositions for segregating target nucleic acid from mixed nucleic acid samples |
| EP2723904A4 (de) | 2011-06-27 | 2015-03-04 | Flir Systems | Verfahren und zusammensetzungen zum trennen einer zielnukleinsäure von gemischten nukleinsäureproben |
| US9487824B2 (en) | 2011-06-28 | 2016-11-08 | Igor Kutyavin | Methods and compositions for enrichment of nucleic acids in mixtures of highly homologous sequences |
| WO2013066438A2 (en) | 2011-07-22 | 2013-05-10 | President And Fellows Of Harvard College | Evaluation and improvement of nuclease cleavage specificity |
| US9458453B2 (en) | 2012-06-12 | 2016-10-04 | The Johns Hopkins University | Methods for efficient, expansive, user-defined DNA mutagenesis |
| TWI707038B (zh) | 2013-08-05 | 2020-10-11 | 美商扭轉生物科技有限公司 | 重新合成之基因庫 |
| US20150044192A1 (en) | 2013-08-09 | 2015-02-12 | President And Fellows Of Harvard College | Methods for identifying a target site of a cas9 nuclease |
| US9388430B2 (en) | 2013-09-06 | 2016-07-12 | President And Fellows Of Harvard College | Cas9-recombinase fusion proteins and uses thereof |
| US9340799B2 (en) | 2013-09-06 | 2016-05-17 | President And Fellows Of Harvard College | MRNA-sensing switchable gRNAs |
| US20150166984A1 (en) | 2013-12-12 | 2015-06-18 | President And Fellows Of Harvard College | Methods for correcting alpha-antitrypsin point mutations |
| WO2016022363A2 (en) | 2014-07-30 | 2016-02-11 | President And Fellows Of Harvard College | Cas9 proteins including ligand-dependent inteins |
| WO2016126987A1 (en) * | 2015-02-04 | 2016-08-11 | Twist Bioscience Corporation | Compositions and methods for synthetic gene assembly |
| WO2016126882A1 (en) | 2015-02-04 | 2016-08-11 | Twist Bioscience Corporation | Methods and devices for de novo oligonucleic acid assembly |
| US9834774B2 (en) | 2015-02-11 | 2017-12-05 | Agilent Technologies, Inc. | Methods and compositions for rapid seamless DNA assembly |
| US9981239B2 (en) | 2015-04-21 | 2018-05-29 | Twist Bioscience Corporation | Devices and methods for oligonucleic acid library synthesis |
| KR20180050411A (ko) | 2015-09-18 | 2018-05-14 | 트위스트 바이오사이언스 코포레이션 | 올리고핵산 변이체 라이브러리 및 그의 합성 |
| CN108698012A (zh) | 2015-09-22 | 2018-10-23 | 特韦斯特生物科学公司 | 用于核酸合成的柔性基底 |
| SG10202104041PA (en) | 2015-10-23 | 2021-06-29 | Harvard College | Nucleobase editors and uses thereof |
| WO2017095958A1 (en) | 2015-12-01 | 2017-06-08 | Twist Bioscience Corporation | Functionalized surfaces and preparation thereof |
| US20170266218A1 (en) * | 2016-03-21 | 2017-09-21 | Steve McNerlin | Nad+ coenzyme formulation and methods of making and using the same |
| KR20250103795A (ko) | 2016-08-03 | 2025-07-07 | 프레지던트 앤드 펠로우즈 오브 하바드 칼리지 | 아데노신 핵염기 편집제 및 그의 용도 |
| US11661590B2 (en) | 2016-08-09 | 2023-05-30 | President And Fellows Of Harvard College | Programmable CAS9-recombinase fusion proteins and uses thereof |
| KR102212257B1 (ko) | 2016-08-22 | 2021-02-04 | 트위스트 바이오사이언스 코포레이션 | 드 노보 합성된 핵산 라이브러리 |
| WO2018039438A1 (en) | 2016-08-24 | 2018-03-01 | President And Fellows Of Harvard College | Incorporation of unnatural amino acids into proteins using base editing |
| WO2018057526A2 (en) | 2016-09-21 | 2018-03-29 | Twist Bioscience Corporation | Nucleic acid based data storage |
| SG11201903089RA (en) | 2016-10-14 | 2019-05-30 | Harvard College | Aav delivery of nucleobase editors |
| EP3554514A4 (de) | 2016-12-16 | 2020-08-05 | Twist Bioscience Corporation | Variante bibliotheken der immunologischen synapse und synthese davon |
| WO2018119359A1 (en) | 2016-12-23 | 2018-06-28 | President And Fellows Of Harvard College | Editing of ccr5 receptor gene to protect against hiv infection |
| CN110892485B (zh) | 2017-02-22 | 2024-03-22 | 特韦斯特生物科学公司 | 基于核酸的数据存储 |
| EP3592381A1 (de) | 2017-03-09 | 2020-01-15 | President and Fellows of Harvard College | Krebsimpfstoff |
| US11898179B2 (en) | 2017-03-09 | 2024-02-13 | President And Fellows Of Harvard College | Suppression of pain by gene editing |
| WO2018165629A1 (en) | 2017-03-10 | 2018-09-13 | President And Fellows Of Harvard College | Cytosine to guanine base editor |
| AU2018234629A1 (en) | 2017-03-15 | 2019-10-17 | Twist Bioscience Corporation | Variant libraries of the immunological synapse and synthesis thereof |
| WO2018176009A1 (en) | 2017-03-23 | 2018-09-27 | President And Fellows Of Harvard College | Nucleobase editors comprising nucleic acid programmable dna binding proteins |
| WO2018209320A1 (en) | 2017-05-12 | 2018-11-15 | President And Fellows Of Harvard College | Aptazyme-embedded guide rnas for use with crispr-cas9 in genome editing and transcriptional activation |
| JP7169999B2 (ja) | 2017-06-12 | 2022-11-11 | ツイスト バイオサイエンス コーポレーション | シームレス核酸アセンブリのための方法 |
| WO2018231864A1 (en) | 2017-06-12 | 2018-12-20 | Twist Bioscience Corporation | Methods for seamless nucleic acid assembly |
| US10279736B2 (en) | 2017-06-29 | 2019-05-07 | Jvis-Usa, Llc | Vehicle interior trim assembly configured to form a light pattern having an emblem shape at the front of a trim part such as an air bag cover |
| CN111801345A (zh) | 2017-07-28 | 2020-10-20 | 哈佛大学的校长及成员们 | 使用噬菌体辅助连续进化(pace)的进化碱基编辑器的方法和组合物 |
| EP3676376B1 (de) | 2017-08-30 | 2025-01-15 | President and Fellows of Harvard College | Hocheffiziente baseneditoren mit gam |
| AU2018328847A1 (en) | 2017-09-11 | 2020-04-23 | Twist Bioscience Corporation | GPCR binding proteins and synthesis thereof |
| US11795443B2 (en) | 2017-10-16 | 2023-10-24 | The Broad Institute, Inc. | Uses of adenosine base editors |
| WO2019079769A1 (en) | 2017-10-20 | 2019-04-25 | Twist Bioscience Corporation | HEATED NANOWELLS FOR THE SYNTHESIS OF POLYNUCLEOTIDES |
| WO2019118949A1 (en) | 2017-12-15 | 2019-06-20 | The Broad Institute, Inc. | Systems and methods for predicting repair outcomes in genetic engineering |
| EP4715681A2 (de) | 2018-01-04 | 2026-03-25 | Atlas Data Storage, Inc. | Digitale informationsspeicherung auf dna-basis |
| IL278771B2 (en) | 2018-05-18 | 2025-09-01 | Twist Bioscience Corp | Polynucleotides, reagents and methods for nucleic acid hybridization |
| US12157760B2 (en) | 2018-05-23 | 2024-12-03 | The Broad Institute, Inc. | Base editors and uses thereof |
| EP3820495A4 (de) | 2018-07-09 | 2022-07-20 | The Broad Institute Inc. | Rna-programmierbare epigenetische rna-modifikatoren und deren verwendungen |
| WO2020092453A1 (en) | 2018-10-29 | 2020-05-07 | The Broad Institute, Inc. | Nucleobase editors comprising geocas9 and uses thereof |
| WO2020139871A1 (en) | 2018-12-26 | 2020-07-02 | Twist Bioscience Corporation | Highly accurate de novo polynucleotide synthesis |
| US12351837B2 (en) | 2019-01-23 | 2025-07-08 | The Broad Institute, Inc. | Supernegatively charged proteins and uses thereof |
| WO2020176678A1 (en) | 2019-02-26 | 2020-09-03 | Twist Bioscience Corporation | Variant nucleic acid libraries for glp1 receptor |
| AU2020227802A1 (en) | 2019-02-26 | 2021-10-14 | Twist Bioscience Corporation | Variant nucleic acid libraries for antibody optimization |
| EP3942043A2 (de) | 2019-03-19 | 2022-01-26 | The Broad Institute, Inc. | Verfahren und zusammensetzungen zur editierung von nukleotidsequenzen |
| WO2020214842A1 (en) | 2019-04-17 | 2020-10-22 | The Broad Institute, Inc. | Adenine base editors with reduced off-target effects |
| CA3144644A1 (en) | 2019-06-21 | 2020-12-24 | Twist Bioscience Corporation | Barcode-based nucleic acid sequence assembly |
| US12091777B2 (en) | 2019-09-23 | 2024-09-17 | Twist Bioscience Corporation | Variant nucleic acid libraries for CRTH2 |
| EP4034564A4 (de) | 2019-09-23 | 2023-12-13 | Twist Bioscience Corporation | Variante nukleinsäurebibliotheken für einzeldomänenantikörper |
| US12435330B2 (en) | 2019-10-10 | 2025-10-07 | The Broad Institute, Inc. | Methods and compositions for prime editing RNA |
| BR112022011235A2 (pt) | 2019-12-09 | 2022-12-13 | Twist Bioscience Corp | Bibliotecas de variantes de ácido nucleico para receptores de adenosina |
| US20230083751A1 (en) * | 2019-12-30 | 2023-03-16 | Nanjing GenScript Biotech Co., Ltd. | Method For Constructing Gene Mutation Library |
| BR112022022603A2 (pt) | 2020-05-08 | 2023-01-17 | Broad Inst Inc | Métodos e composições para edição simultânea de ambas as fitas de sequência alvo de nucleotídeos de fita dupla |
| US12157884B2 (en) * | 2020-12-08 | 2024-12-03 | Trustees Of Tufts College | Method of generating targeted DNA libraries |
Family Cites Families (21)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US5556750A (en) * | 1989-05-12 | 1996-09-17 | Duke University | Methods and kits for fractionating a population of DNA molecules based on the presence or absence of a base-pair mismatch utilizing mismatch repair systems |
| US5494810A (en) * | 1990-05-03 | 1996-02-27 | Cornell Research Foundation, Inc. | Thermostable ligase-mediated DNA amplifications system for the detection of genetic disease |
| EP0463395B1 (de) * | 1990-06-22 | 1997-05-14 | F. Hoffmann-La Roche Ag | Nachweis von schwachen Metabolisierungsreagentien von Drogen |
| US5478724A (en) * | 1991-08-16 | 1995-12-26 | The Rockefeller University | Lentivirus-specific nucleotide probes and methods of use |
| US5436149A (en) | 1993-02-19 | 1995-07-25 | Barnes; Wayne M. | Thermostable DNA polymerase with enhanced thermostability and enhanced length and efficiency of primer extension |
| US6117679A (en) | 1994-02-17 | 2000-09-12 | Maxygen, Inc. | Methods for generating polynucleotides having desired characteristics by iterative selection and recombination |
| US5605793A (en) | 1994-02-17 | 1997-02-25 | Affymax Technologies N.V. | Methods for in vitro recombination |
| US6165793A (en) | 1996-03-25 | 2000-12-26 | Maxygen, Inc. | Methods for generating polynucleotides having desired characteristics by iterative selection and recombination |
| US6063566A (en) * | 1994-05-13 | 2000-05-16 | The Scripps Research Institute | Catalytic RNA molecules |
| US5942391A (en) * | 1994-06-22 | 1999-08-24 | Mount Sinai School Of Medicine | Nucleic acid amplification method: ramification-extension amplification method (RAM) |
| US5965408A (en) * | 1996-07-09 | 1999-10-12 | Diversa Corporation | Method of DNA reassembly by interrupting synthesis |
| CA2317896C (en) * | 1998-01-09 | 2004-08-10 | University Of Utah Research Foundation | Method for in vitro amplification of circular dna |
| US6284461B1 (en) * | 1998-04-28 | 2001-09-04 | Aurora Biosciences Corporation | Use of inhibitors in reporter assays |
| US6355431B1 (en) * | 1999-04-20 | 2002-03-12 | Illumina, Inc. | Detection of nucleic acid amplification reactions using bead arrays |
| EP1208210A2 (de) * | 1999-07-30 | 2002-05-29 | Stratagene | Archebacterielle replikationsunterstützende faktoren und ihre verwendung |
| WO2001029212A1 (en) | 1999-10-19 | 2001-04-26 | Enchira Biotechnology Corporation | Methods for chimeragenesis of whole genomes or large polynucleotides |
| AU1098001A (en) | 1999-10-19 | 2001-04-30 | Enchira Biotechnology Corporation | Method for directed evolution by random chimeragenesis on transient templates |
| US6528254B1 (en) * | 1999-10-29 | 2003-03-04 | Stratagene | Methods for detection of a target nucleic acid sequence |
| US6221603B1 (en) * | 2000-02-04 | 2001-04-24 | Molecular Dynamics, Inc. | Rolling circle amplification assay for nucleic acid analysis |
| JP3859947B2 (ja) | 2000-08-04 | 2006-12-20 | 独立行政法人理化学研究所 | 突然変異導入方法 |
| US6350580B1 (en) * | 2000-10-11 | 2002-02-26 | Stratagene | Methods for detection of a target nucleic acid using a probe comprising secondary structure |
-
2002
- 2002-07-18 US US10/198,449 patent/US8067556B2/en not_active Expired - Fee Related
- 2002-07-18 EP EP02798908A patent/EP1417327B1/de not_active Expired - Lifetime
- 2002-07-18 JP JP2003529892A patent/JP4473573B2/ja not_active Expired - Lifetime
- 2002-07-18 CA CA002454319A patent/CA2454319A1/en not_active Abandoned
- 2002-07-18 WO PCT/US2002/022759 patent/WO2003025118A2/en not_active Ceased
- 2002-07-18 DE DE60232523T patent/DE60232523D1/de not_active Expired - Lifetime
- 2002-07-18 AT AT02798908T patent/ATE432981T1/de not_active IP Right Cessation
-
2011
- 2011-10-11 US US13/270,698 patent/US8685676B2/en not_active Expired - Fee Related
Also Published As
| Publication number | Publication date |
|---|---|
| US8067556B2 (en) | 2011-11-29 |
| US20060051748A1 (en) | 2006-03-09 |
| EP1417327B1 (de) | 2009-06-03 |
| US8685676B2 (en) | 2014-04-01 |
| WO2003025118A3 (en) | 2003-08-14 |
| EP1417327A2 (de) | 2004-05-12 |
| US20130122550A1 (en) | 2013-05-16 |
| CA2454319A1 (en) | 2003-03-27 |
| EP1417327A4 (de) | 2005-11-30 |
| JP4473573B2 (ja) | 2010-06-02 |
| WO2003025118A2 (en) | 2003-03-27 |
| JP2005521381A (ja) | 2005-07-21 |
| DE60232523D1 (de) | 2009-07-16 |
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Legal Events
| Date | Code | Title | Description |
|---|---|---|---|
| RER | Ceased as to paragraph 5 lit. 3 law introducing patent treaties |