ATE516368T1 - Erstellung eines echtzeit-genexpressionsprofils - Google Patents

Erstellung eines echtzeit-genexpressionsprofils

Info

Publication number
ATE516368T1
ATE516368T1 AT04719806T AT04719806T ATE516368T1 AT E516368 T1 ATE516368 T1 AT E516368T1 AT 04719806 T AT04719806 T AT 04719806T AT 04719806 T AT04719806 T AT 04719806T AT E516368 T1 ATE516368 T1 AT E516368T1
Authority
AT
Austria
Prior art keywords
methods
monitoring
amplification
creation
real
Prior art date
Application number
AT04719806T
Other languages
English (en)
Inventor
Vladimir Slepnev
Original Assignee
Primeradx Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Primeradx Inc filed Critical Primeradx Inc
Application granted granted Critical
Publication of ATE516368T1 publication Critical patent/ATE516368T1/de

Links

Classifications

    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N21/00Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
    • G01N21/62Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light
    • G01N21/63Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light optically excited
    • G01N21/64Fluorescence; Phosphorescence
    • G01N21/6486Measuring fluorescence of biological material, e.g. DNA, RNA, cells
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844Nucleic acid amplification reactions
    • C12Q1/6851Quantitative amplification
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/158Expression markers

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Organic Chemistry (AREA)
  • Engineering & Computer Science (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Molecular Biology (AREA)
  • Physics & Mathematics (AREA)
  • Immunology (AREA)
  • General Health & Medical Sciences (AREA)
  • Biochemistry (AREA)
  • Analytical Chemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Biophysics (AREA)
  • Biotechnology (AREA)
  • General Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Genetics & Genomics (AREA)
  • Biomedical Technology (AREA)
  • Nuclear Medicine, Radiotherapy & Molecular Imaging (AREA)
  • General Physics & Mathematics (AREA)
  • Pathology (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
AT04719806T 2003-03-12 2004-03-11 Erstellung eines echtzeit-genexpressionsprofils ATE516368T1 (de)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US10/387,286 US7081339B2 (en) 2002-04-12 2003-03-12 Methods for variation detection
PCT/US2004/007544 WO2004081228A2 (en) 2003-03-12 2004-03-11 Real time gene expression profiling

Publications (1)

Publication Number Publication Date
ATE516368T1 true ATE516368T1 (de) 2011-07-15

Family

ID=32987332

Family Applications (1)

Application Number Title Priority Date Filing Date
AT04719806T ATE516368T1 (de) 2003-03-12 2004-03-11 Erstellung eines echtzeit-genexpressionsprofils

Country Status (5)

Country Link
US (4) US7081339B2 (de)
EP (1) EP1601780B1 (de)
JP (2) JP2006519611A (de)
AT (1) ATE516368T1 (de)
WO (1) WO2004081228A2 (de)

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US8932989B2 (en) 2011-07-25 2015-01-13 Bioinventors & Entrepreneurs Network, Llc Sieving of nucleic acid samples
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US10504613B2 (en) 2012-12-20 2019-12-10 Sequenom, Inc. Methods and processes for non-invasive assessment of genetic variations
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EP2872648B1 (de) 2012-07-13 2019-09-04 Sequenom, Inc. Verfahren und zusammensetzungen zur methylierungsbasierten anreicherung fetaler nukleinsäure aus einer mütterlichen probe für nicht-invasive pränatale diagnosen
WO2014168711A1 (en) 2013-03-13 2014-10-16 Sequenom, Inc. Primers for dna methylation analysis
US20150127842A1 (en) * 2013-11-05 2015-05-07 D2 Technologies Inc. Method for Extending Application Interface for Future Applications
GB201320071D0 (en) * 2013-11-13 2013-12-25 Univ Leuven Kath Monitoring multiplex DNA amplification
US11365447B2 (en) 2014-03-13 2022-06-21 Sequenom, Inc. Methods and processes for non-invasive assessment of genetic variations
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JP7708408B2 (ja) * 2018-05-14 2025-07-15 国立大学法人神戸大学 二本鎖dna合成方法
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EP4074839A1 (de) 2021-04-16 2022-10-19 Biotype GmbH Optimierte oligonukleotid-tx-sonde für eine multiplexing-analyse von nukleinsäuren und ein multiplexing-verfahren
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Also Published As

Publication number Publication date
US20100221725A1 (en) 2010-09-02
US8182995B2 (en) 2012-05-22
WO2004081228A2 (en) 2004-09-23
EP1601780A4 (de) 2008-05-21
US20130210013A1 (en) 2013-08-15
JP2013099332A (ja) 2013-05-23
US20070037189A1 (en) 2007-02-15
JP2006519611A (ja) 2006-08-31
JP5725670B2 (ja) 2015-05-27
EP1601780B1 (de) 2011-07-13
EP1601780A2 (de) 2005-12-07
US20030235844A1 (en) 2003-12-25
US7081339B2 (en) 2006-07-25
US7674582B2 (en) 2010-03-09
WO2004081228A3 (en) 2006-03-16

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