DK1036202T3 - Fremgangsmåde til identifikation af nucleinsyrer ved matriksassisteret laserdesorptions/ionisationsmassespektrometri - Google Patents

Fremgangsmåde til identifikation af nucleinsyrer ved matriksassisteret laserdesorptions/ionisationsmassespektrometri

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Publication number
DK1036202T3
DK1036202T3 DK98966608T DK98966608T DK1036202T3 DK 1036202 T3 DK1036202 T3 DK 1036202T3 DK 98966608 T DK98966608 T DK 98966608T DK 98966608 T DK98966608 T DK 98966608T DK 1036202 T3 DK1036202 T3 DK 1036202T3
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DK
Denmark
Prior art keywords
nucleic acids
mass spectrometry
laser desorption
assisted laser
ionization mass
Prior art date
Application number
DK98966608T
Other languages
English (en)
Inventor
Kurt Berlin
Hans Lehrach
Ivo Glynne Gut
Original Assignee
Max Planck Gesellschaft
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Max Planck Gesellschaft filed Critical Max Planck Gesellschaft
Application granted granted Critical
Publication of DK1036202T3 publication Critical patent/DK1036202T3/da

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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869Methods for sequencing
    • C12Q1/6872Methods for sequencing involving mass spectrometry
    • HELECTRICITY
    • H01ELECTRIC ELEMENTS
    • H01JELECTRIC DISCHARGE TUBES OR DISCHARGE LAMPS
    • H01J49/00Particle spectrometers or separator tubes
    • H01J49/02Details
    • H01J49/04Arrangements for introducing or extracting samples to be analysed, e.g. vacuum locks; Arrangements for external adjustment of electron- or ion-optical components
    • H01J49/0409Sample holders or containers
    • H01J49/0418Sample holders or containers for laser desorption, e.g. matrix-assisted laser desorption/ionisation [MALDI] plates or surface enhanced laser desorption/ionisation [SELDI] plates

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Molecular Biology (AREA)
  • Biochemistry (AREA)
  • Microbiology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Analytical Chemistry (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Immunology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Other Investigation Or Analysis Of Materials By Electrical Means (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
DK98966608T 1997-12-05 1998-12-04 Fremgangsmåde til identifikation af nucleinsyrer ved matriksassisteret laserdesorptions/ionisationsmassespektrometri DK1036202T3 (da)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
EP97121471 1997-12-05
PCT/EP1998/007911 WO1999029898A2 (de) 1997-12-05 1998-12-04 Verfahren zur identifikation von nucleinsäuren durch matrix-assistierte laser desorptions/ionisations massenspektrometrie

Publications (1)

Publication Number Publication Date
DK1036202T3 true DK1036202T3 (da) 2002-08-12

Family

ID=8227757

Family Applications (1)

Application Number Title Priority Date Filing Date
DK98966608T DK1036202T3 (da) 1997-12-05 1998-12-04 Fremgangsmåde til identifikation af nucleinsyrer ved matriksassisteret laserdesorptions/ionisationsmassespektrometri

Country Status (8)

Country Link
EP (1) EP1036202B1 (da)
JP (1) JP2001526381A (da)
AT (1) ATE217028T1 (da)
CA (1) CA2312052A1 (da)
DE (1) DE59804008D1 (da)
DK (1) DK1036202T3 (da)
ES (1) ES2173670T3 (da)
WO (1) WO1999029898A2 (da)

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DE19957827C2 (de) * 1999-11-25 2003-06-12 Epigenomics Ag Verwendung eines Oligomer-Arrays mit PNA- und/oder DNA-Oligomeren auf einer Oberfläche
WO2001077377A2 (en) * 2000-04-06 2001-10-18 Epigenomics Ag Diagnosis of diseases associated with dna replication by assessing dna methylation
DE10027120A1 (de) * 2000-05-23 2001-12-06 Epigenomics Ag Probenträger für Massenspektrometer
AU2001276371A1 (en) * 2000-06-30 2002-01-14 Epigenomics Ag Method and nucleic acids for analysing the methylation of genes implicated pharmacogenomics
DE10054974A1 (de) * 2000-11-06 2002-06-06 Epigenomics Ag Diagnose von mit Cdk4 assoziierten Krankheiten
DE10061338A1 (de) * 2000-12-06 2002-06-20 Epigenomics Ag Diagnose von mit Angiogenese assoziierten Krankheiten
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US7666588B2 (en) 2001-03-02 2010-02-23 Ibis Biosciences, Inc. Methods for rapid forensic analysis of mitochondrial DNA and characterization of mitochondrial DNA heteroplasmy
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JP2002372517A (ja) * 2001-05-31 2002-12-26 Inst Of Physical & Chemical Res 質量分析法によるタンパク質の構造解析方法
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US20050266411A1 (en) 2004-05-25 2005-12-01 Hofstadler Steven A Methods for rapid forensic analysis of mitochondrial DNA
US7811753B2 (en) 2004-07-14 2010-10-12 Ibis Biosciences, Inc. Methods for repairing degraded DNA
US8084207B2 (en) 2005-03-03 2011-12-27 Ibis Bioscience, Inc. Compositions for use in identification of papillomavirus
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EP2010679A2 (en) 2006-04-06 2009-01-07 Ibis Biosciences, Inc. Compositions for the use in identification of fungi
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Also Published As

Publication number Publication date
CA2312052A1 (en) 1999-06-17
JP2001526381A (ja) 2001-12-18
DE59804008D1 (de) 2002-06-06
WO1999029898A3 (de) 1999-10-28
EP1036202B1 (de) 2002-05-02
WO1999029898A2 (de) 1999-06-17
ES2173670T3 (es) 2002-10-16
ATE217028T1 (de) 2002-05-15
EP1036202A2 (de) 2000-09-20

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