DK1226271T3 - DNA-sekventeringsmetode - Google Patents

DNA-sekventeringsmetode

Info

Publication number
DK1226271T3
DK1226271T3 DK00964544T DK00964544T DK1226271T3 DK 1226271 T3 DK1226271 T3 DK 1226271T3 DK 00964544 T DK00964544 T DK 00964544T DK 00964544 T DK00964544 T DK 00964544T DK 1226271 T3 DK1226271 T3 DK 1226271T3
Authority
DK
Denmark
Prior art keywords
dna sequencing
polynucleotide
enzyme
detection
conformational change
Prior art date
Application number
DK00964544T
Other languages
English (en)
Inventor
Daniel Henry Densham
Original Assignee
Medical Biosystems Ltd
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Medical Biosystems Ltd filed Critical Medical Biosystems Ltd
Application granted granted Critical
Publication of DK1226271T3 publication Critical patent/DK1226271T3/da

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869Methods for sequencing

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Wood Science & Technology (AREA)
  • Zoology (AREA)
  • Engineering & Computer Science (AREA)
  • Biochemistry (AREA)
  • General Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Molecular Biology (AREA)
  • Physics & Mathematics (AREA)
  • Biotechnology (AREA)
  • Analytical Chemistry (AREA)
  • Biophysics (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Immunology (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Investigating, Analyzing Materials By Fluorescence Or Luminescence (AREA)
  • Saccharide Compounds (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
  • Immobilizing And Processing Of Enzymes And Microorganisms (AREA)
  • Investigating Or Analysing Materials By The Use Of Chemical Reactions (AREA)
DK00964544T 1999-10-06 2000-10-06 DNA-sekventeringsmetode DK1226271T3 (da)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
GBGB9923644.0A GB9923644D0 (en) 1999-10-06 1999-10-06 DNA sequencing
PCT/GB2000/003860 WO2001025480A2 (en) 1999-10-06 2000-10-06 Dna sequencing method

Publications (1)

Publication Number Publication Date
DK1226271T3 true DK1226271T3 (da) 2008-07-07

Family

ID=10862234

Family Applications (1)

Application Number Title Priority Date Filing Date
DK00964544T DK1226271T3 (da) 1999-10-06 2000-10-06 DNA-sekventeringsmetode

Country Status (20)

Country Link
US (4) US20050214849A1 (da)
EP (1) EP1226271B1 (da)
JP (2) JP5030249B2 (da)
KR (1) KR100809171B1 (da)
CN (1) CN1159457C (da)
AT (1) ATE388242T1 (da)
AU (1) AU769102B2 (da)
BR (1) BR0014468A (da)
CA (1) CA2386115C (da)
DE (1) DE60038244T2 (da)
DK (1) DK1226271T3 (da)
EA (1) EA006702B1 (da)
ES (1) ES2302497T3 (da)
GB (1) GB9923644D0 (da)
IL (2) IL148678A0 (da)
IS (1) IS6333A (da)
MX (1) MXPA02003534A (da)
NZ (1) NZ517775A (da)
PT (1) PT1226271E (da)
WO (1) WO2001025480A2 (da)

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US10975427B2 (en) 2017-01-20 2021-04-13 Omniome, Inc. Process for cognate nucleotide detection in a nucleic acid sequencing workflow
US11492666B2 (en) 2017-02-15 2022-11-08 Pacific Biosciences Of California, Inc. Distinguishing sequences by detecting polymerase dissociation
US9951385B1 (en) 2017-04-25 2018-04-24 Omniome, Inc. Methods and apparatus that increase sequencing-by-binding efficiency
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Also Published As

Publication number Publication date
IL148678A0 (en) 2002-09-12
CA2386115A1 (en) 2001-04-12
EP1226271B1 (en) 2008-03-05
IS6333A (is) 2002-04-05
DE60038244T2 (de) 2009-04-23
AU769102B2 (en) 2004-01-15
PT1226271E (pt) 2008-05-23
US20050214849A1 (en) 2005-09-29
HK1045857A1 (en) 2002-12-13
JP5030249B2 (ja) 2012-09-19
CA2386115C (en) 2010-06-15
CN1391615A (zh) 2003-01-15
KR20020059444A (ko) 2002-07-12
JP2003511043A (ja) 2003-03-25
ES2302497T3 (es) 2008-07-16
US20120214164A1 (en) 2012-08-23
ATE388242T1 (de) 2008-03-15
EA200200428A1 (ru) 2002-10-31
AU7546700A (en) 2001-05-10
WO2001025480A2 (en) 2001-04-12
MXPA02003534A (es) 2004-09-10
DE60038244D1 (de) 2008-04-17
IL148678A (en) 2008-12-29
JP2012196201A (ja) 2012-10-18
CN1159457C (zh) 2004-07-28
KR100809171B1 (ko) 2008-02-29
EA006702B1 (ru) 2006-02-24
GB9923644D0 (en) 1999-12-08
WO2001025480A3 (en) 2002-05-16
EP1226271A2 (en) 2002-07-31
US20110177520A1 (en) 2011-07-21
NZ517775A (en) 2004-01-30
US7939264B1 (en) 2011-05-10
BR0014468A (pt) 2002-08-20

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