JPH09500398A - N−2置換プリン類 - Google Patents
N−2置換プリン類Info
- Publication number
- JPH09500398A JPH09500398A JP7515258A JP51525895A JPH09500398A JP H09500398 A JPH09500398 A JP H09500398A JP 7515258 A JP7515258 A JP 7515258A JP 51525895 A JP51525895 A JP 51525895A JP H09500398 A JPH09500398 A JP H09500398A
- Authority
- JP
- Japan
- Prior art keywords
- compound
- compound according
- deoxyribose
- ribose
- oligonucleotide
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Granted
Links
- 150000003212 purines Chemical class 0.000 title abstract description 7
- 108091034117 Oligonucleotide Proteins 0.000 claims abstract description 151
- 150000001875 compounds Chemical class 0.000 claims abstract description 151
- JLCPHMBAVCMARE-UHFFFAOYSA-N [3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[3-[[3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-hydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methyl [5-(6-aminopurin-9-yl)-2-(hydroxymethyl)oxolan-3-yl] hydrogen phosphate Polymers Cc1cn(C2CC(OP(O)(=O)OCC3OC(CC3OP(O)(=O)OCC3OC(CC3O)n3cnc4c3nc(N)[nH]c4=O)n3cnc4c3nc(N)[nH]c4=O)C(COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3CO)n3cnc4c(N)ncnc34)n3ccc(N)nc3=O)n3cnc4c(N)ncnc34)n3ccc(N)nc3=O)n3ccc(N)nc3=O)n3ccc(N)nc3=O)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cc(C)c(=O)[nH]c3=O)n3cc(C)c(=O)[nH]c3=O)n3ccc(N)nc3=O)n3cc(C)c(=O)[nH]c3=O)n3cnc4c3nc(N)[nH]c4=O)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)O2)c(=O)[nH]c1=O JLCPHMBAVCMARE-UHFFFAOYSA-N 0.000 claims abstract description 56
- 125000003729 nucleotide group Chemical group 0.000 claims abstract description 33
- 239000002773 nucleotide Substances 0.000 claims abstract description 27
- 238000003776 cleavage reaction Methods 0.000 claims abstract description 19
- 230000007017 scission Effects 0.000 claims abstract description 17
- -1 isobutyryl Chemical group 0.000 claims description 100
- RAXXELZNTBOGNW-UHFFFAOYSA-N imidazole Natural products C1=CNC=N1 RAXXELZNTBOGNW-UHFFFAOYSA-N 0.000 claims description 60
- 125000000524 functional group Chemical group 0.000 claims description 59
- ASJSAQIRZKANQN-CRCLSJGQSA-N 2-deoxy-D-ribose Chemical compound OC[C@@H](O)[C@@H](O)CC=O ASJSAQIRZKANQN-CRCLSJGQSA-N 0.000 claims description 53
- LFQSCWFLJHTTHZ-UHFFFAOYSA-N Ethanol Chemical group CCO LFQSCWFLJHTTHZ-UHFFFAOYSA-N 0.000 claims description 51
- VLKZOEOYAKHREP-UHFFFAOYSA-N n-Hexane Chemical group CCCCCC VLKZOEOYAKHREP-UHFFFAOYSA-N 0.000 claims description 51
- PYMYPHUHKUWMLA-LMVFSUKVSA-N Ribose Natural products OC[C@@H](O)[C@@H](O)[C@@H](O)C=O PYMYPHUHKUWMLA-LMVFSUKVSA-N 0.000 claims description 45
- HMFHBZSHGGEWLO-UHFFFAOYSA-N alpha-D-Furanose-Ribose Natural products OCC1OC(O)C(O)C1O HMFHBZSHGGEWLO-UHFFFAOYSA-N 0.000 claims description 45
- 235000000346 sugar Nutrition 0.000 claims description 45
- HMFHBZSHGGEWLO-SOOFDHNKSA-N D-ribofuranose Chemical compound OC[C@H]1OC(O)[C@H](O)[C@@H]1O HMFHBZSHGGEWLO-SOOFDHNKSA-N 0.000 claims description 37
- 150000001335 aliphatic alkanes Chemical class 0.000 claims description 30
- 150000001412 amines Chemical group 0.000 claims description 30
- OAKJQQAXSVQMHS-UHFFFAOYSA-N Hydrazine Chemical compound NN OAKJQQAXSVQMHS-UHFFFAOYSA-N 0.000 claims description 28
- 125000001436 propyl group Chemical group [H]C([*])([H])C([H])([H])C([H])([H])[H] 0.000 claims description 25
- 125000004432 carbon atom Chemical group C* 0.000 claims description 21
- AVXURJPOCDRRFD-UHFFFAOYSA-N Hydroxylamine Chemical compound ON AVXURJPOCDRRFD-UHFFFAOYSA-N 0.000 claims description 14
- 125000002883 imidazolyl group Chemical group 0.000 claims description 14
- 229910052757 nitrogen Inorganic materials 0.000 claims description 14
- DUIOPKIIICUYRZ-UHFFFAOYSA-N semicarbazide Chemical compound NNC(N)=O DUIOPKIIICUYRZ-UHFFFAOYSA-N 0.000 claims description 14
- 102100034343 Integrase Human genes 0.000 claims description 13
- 229910019142 PO4 Inorganic materials 0.000 claims description 13
- 239000010452 phosphate Substances 0.000 claims description 13
- 101710203526 Integrase Proteins 0.000 claims description 12
- 125000003545 alkoxy group Chemical group 0.000 claims description 12
- 125000001495 ethyl group Chemical group [H]C([H])([H])C([H])([H])* 0.000 claims description 12
- 150000007857 hydrazones Chemical class 0.000 claims description 12
- 125000001183 hydrocarbyl group Chemical group 0.000 claims description 12
- 125000002467 phosphate group Chemical group [H]OP(=O)(O[H])O[*] 0.000 claims description 12
- RYYWUUFWQRZTIU-UHFFFAOYSA-K thiophosphate Chemical compound [O-]P([O-])([O-])=S RYYWUUFWQRZTIU-UHFFFAOYSA-K 0.000 claims description 12
- 150000001299 aldehydes Chemical group 0.000 claims description 10
- BRWIZMBXBAOCCF-UHFFFAOYSA-N hydrazinecarbothioamide Chemical compound NNC(N)=S BRWIZMBXBAOCCF-UHFFFAOYSA-N 0.000 claims description 10
- 229910052736 halogen Chemical group 0.000 claims description 9
- 150000002367 halogens Chemical group 0.000 claims description 9
- 150000002576 ketones Chemical group 0.000 claims description 9
- QJGQUHMNIGDVPM-UHFFFAOYSA-N nitrogen group Chemical group [N] QJGQUHMNIGDVPM-UHFFFAOYSA-N 0.000 claims description 9
- NBIIXXVUZAFLBC-UHFFFAOYSA-K phosphate Chemical compound [O-]P([O-])([O-])=O NBIIXXVUZAFLBC-UHFFFAOYSA-K 0.000 claims description 9
- 150000008300 phosphoramidites Chemical class 0.000 claims description 9
- YACKEPLHDIMKIO-UHFFFAOYSA-N methylphosphonic acid Chemical group CP(O)(O)=O YACKEPLHDIMKIO-UHFFFAOYSA-N 0.000 claims description 8
- 125000000548 ribosyl group Chemical group C1([C@H](O)[C@H](O)[C@H](O1)CO)* 0.000 claims description 8
- 229910052799 carbon Inorganic materials 0.000 claims description 7
- 230000000295 complement effect Effects 0.000 claims description 7
- 125000003396 thiol group Chemical group [H]S* 0.000 claims description 6
- LXBGSDVWAMZHDD-UHFFFAOYSA-N 2-methyl-1h-imidazole Chemical group CC1=NC=CN1 LXBGSDVWAMZHDD-UHFFFAOYSA-N 0.000 claims description 4
- XLSZMDLNRCVEIJ-UHFFFAOYSA-N methylimidazole Natural products CC1=CNC=N1 XLSZMDLNRCVEIJ-UHFFFAOYSA-N 0.000 claims description 4
- 150000002460 imidazoles Chemical class 0.000 claims description 3
- 125000001400 nonyl group Chemical group [H]C([*])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])[H] 0.000 claims description 3
- NBWLKCHXMMMNLN-UHFFFAOYSA-N 2-methyldodecan-3-one Chemical group CCCCCCCCCC(=O)C(C)C NBWLKCHXMMMNLN-UHFFFAOYSA-N 0.000 claims description 2
- 150000003013 phosphoric acid derivatives Chemical class 0.000 claims 2
- 108091032973 (ribonucleotides)n+m Proteins 0.000 abstract description 75
- 239000002585 base Substances 0.000 abstract description 32
- 230000000692 anti-sense effect Effects 0.000 abstract description 31
- 239000002777 nucleoside Substances 0.000 abstract description 23
- 230000000694 effects Effects 0.000 abstract description 18
- 125000000623 heterocyclic group Chemical group 0.000 abstract description 18
- 239000003795 chemical substances by application Substances 0.000 abstract description 17
- 230000014509 gene expression Effects 0.000 abstract description 9
- 230000001225 therapeutic effect Effects 0.000 abstract description 9
- 201000010099 disease Diseases 0.000 abstract description 8
- 208000037265 diseases, disorders, signs and symptoms Diseases 0.000 abstract description 8
- 238000010348 incorporation Methods 0.000 abstract description 7
- 125000003835 nucleoside group Chemical group 0.000 abstract description 7
- 230000003993 interaction Effects 0.000 abstract description 6
- 230000014616 translation Effects 0.000 abstract description 6
- 238000004519 manufacturing process Methods 0.000 abstract description 5
- 238000003556 assay Methods 0.000 abstract 1
- YMWUJEATGCHHMB-UHFFFAOYSA-N Dichloromethane Chemical compound ClCCl YMWUJEATGCHHMB-UHFFFAOYSA-N 0.000 description 167
- OKKJLVBELUTLKV-UHFFFAOYSA-N Methanol Chemical compound OC OKKJLVBELUTLKV-UHFFFAOYSA-N 0.000 description 136
- 125000001570 methylene group Chemical group [H]C([H])([*:1])[*:2] 0.000 description 112
- NYHBQMYGNKIUIF-UUOKFMHZSA-N Guanosine Chemical compound C1=NC=2C(=O)NC(N)=NC=2N1[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O NYHBQMYGNKIUIF-UUOKFMHZSA-N 0.000 description 98
- JUJWROOIHBZHMG-UHFFFAOYSA-N Pyridine Chemical compound C1=CC=NC=C1 JUJWROOIHBZHMG-UHFFFAOYSA-N 0.000 description 92
- ZMANZCXQSJIPKH-UHFFFAOYSA-N Triethylamine Chemical compound CCN(CC)CC ZMANZCXQSJIPKH-UHFFFAOYSA-N 0.000 description 80
- CSCPPACGZOOCGX-UHFFFAOYSA-N Acetone Chemical compound CC(C)=O CSCPPACGZOOCGX-UHFFFAOYSA-N 0.000 description 63
- 239000000243 solution Substances 0.000 description 63
- VYPSYNLAJGMNEJ-UHFFFAOYSA-N Silicium dioxide Chemical compound O=[Si]=O VYPSYNLAJGMNEJ-UHFFFAOYSA-N 0.000 description 57
- 239000000203 mixture Substances 0.000 description 51
- 239000011541 reaction mixture Substances 0.000 description 51
- 238000005481 NMR spectroscopy Methods 0.000 description 46
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 46
- UMJSCPRVCHMLSP-UHFFFAOYSA-N pyridine Natural products COC1=CC=CN=C1 UMJSCPRVCHMLSP-UHFFFAOYSA-N 0.000 description 45
- 239000000460 chlorine Substances 0.000 description 37
- 239000003480 eluent Substances 0.000 description 34
- 238000012986 modification Methods 0.000 description 34
- 238000000034 method Methods 0.000 description 33
- 230000004048 modification Effects 0.000 description 33
- 239000000741 silica gel Substances 0.000 description 33
- 229910002027 silica gel Inorganic materials 0.000 description 33
- 239000007787 solid Substances 0.000 description 32
- KDCGOANMDULRCW-UHFFFAOYSA-N 7H-purine Chemical compound N1=CNC2=NC=NC2=C1 KDCGOANMDULRCW-UHFFFAOYSA-N 0.000 description 31
- OIRDTQYFTABQOQ-KQYNXXCUSA-N adenosine Chemical compound C1=NC=2C(N)=NC=NC=2N1[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O OIRDTQYFTABQOQ-KQYNXXCUSA-N 0.000 description 31
- 238000003818 flash chromatography Methods 0.000 description 31
- XEKOWRVHYACXOJ-UHFFFAOYSA-N Ethyl acetate Chemical compound CCOC(C)=O XEKOWRVHYACXOJ-UHFFFAOYSA-N 0.000 description 30
- HEDRZPFGACZZDS-UHFFFAOYSA-N chloroform Substances ClC(Cl)Cl HEDRZPFGACZZDS-UHFFFAOYSA-N 0.000 description 29
- 238000003756 stirring Methods 0.000 description 29
- 239000000284 extract Substances 0.000 description 27
- MIKUYHXYGGJMLM-GIMIYPNGSA-N Crotonoside Natural products C1=NC2=C(N)NC(=O)N=C2N1[C@H]1O[C@@H](CO)[C@H](O)[C@@H]1O MIKUYHXYGGJMLM-GIMIYPNGSA-N 0.000 description 25
- NYHBQMYGNKIUIF-UHFFFAOYSA-N D-guanosine Natural products C1=2NC(N)=NC(=O)C=2N=CN1C1OC(CO)C(O)C1O NYHBQMYGNKIUIF-UHFFFAOYSA-N 0.000 description 25
- 239000012300 argon atmosphere Substances 0.000 description 25
- 229940029575 guanosine Drugs 0.000 description 25
- HEMHJVSKTPXQMS-UHFFFAOYSA-M Sodium hydroxide Chemical compound [OH-].[Na+] HEMHJVSKTPXQMS-UHFFFAOYSA-M 0.000 description 24
- 239000012267 brine Substances 0.000 description 24
- 239000006260 foam Substances 0.000 description 24
- HPALAKNZSZLMCH-UHFFFAOYSA-M sodium;chloride;hydrate Chemical compound O.[Na+].[Cl-] HPALAKNZSZLMCH-UHFFFAOYSA-M 0.000 description 24
- 238000006243 chemical reaction Methods 0.000 description 23
- 239000000047 product Substances 0.000 description 20
- 235000019441 ethanol Nutrition 0.000 description 19
- YXFVVABEGXRONW-UHFFFAOYSA-N Toluene Chemical compound CC1=CC=CC=C1 YXFVVABEGXRONW-UHFFFAOYSA-N 0.000 description 18
- 125000000217 alkyl group Chemical group 0.000 description 18
- 239000002904 solvent Substances 0.000 description 18
- 108020004414 DNA Proteins 0.000 description 17
- 238000000921 elemental analysis Methods 0.000 description 17
- XKJCHHZQLQNZHY-UHFFFAOYSA-N phthalimide Chemical compound C1=CC=C2C(=O)NC(=O)C2=C1 XKJCHHZQLQNZHY-UHFFFAOYSA-N 0.000 description 17
- WYURNTSHIVDZCO-UHFFFAOYSA-N Tetrahydrofuran Chemical compound C1CCOC1 WYURNTSHIVDZCO-UHFFFAOYSA-N 0.000 description 16
- 230000027455 binding Effects 0.000 description 16
- 239000000758 substrate Substances 0.000 description 16
- 125000002103 4,4'-dimethoxytriphenylmethyl group Chemical group [H]C1=C([H])C([H])=C(C([H])=C1[H])C(*)(C1=C([H])C([H])=C(OC([H])([H])[H])C([H])=C1[H])C1=C([H])C([H])=C(OC([H])([H])[H])C([H])=C1[H] 0.000 description 15
- WEVYAHXRMPXWCK-UHFFFAOYSA-N Acetonitrile Chemical compound CC#N WEVYAHXRMPXWCK-UHFFFAOYSA-N 0.000 description 15
- 229960001701 chloroform Drugs 0.000 description 15
- 239000012043 crude product Substances 0.000 description 15
- 239000000706 filtrate Substances 0.000 description 15
- 150000003833 nucleoside derivatives Chemical class 0.000 description 15
- RTZKZFJDLAIYFH-UHFFFAOYSA-N ether Substances CCOCC RTZKZFJDLAIYFH-UHFFFAOYSA-N 0.000 description 14
- 150000007523 nucleic acids Chemical group 0.000 description 14
- YZCKVEUIGOORGS-OUBTZVSYSA-N Deuterium Chemical compound [2H] YZCKVEUIGOORGS-OUBTZVSYSA-N 0.000 description 13
- XYFCBTPGUUZFHI-UHFFFAOYSA-N Phosphine Chemical compound P XYFCBTPGUUZFHI-UHFFFAOYSA-N 0.000 description 13
- 125000003277 amino group Chemical group 0.000 description 13
- 229910052805 deuterium Inorganic materials 0.000 description 13
- 108020004999 messenger RNA Proteins 0.000 description 13
- 108020004707 nucleic acids Proteins 0.000 description 13
- 102000039446 nucleic acids Human genes 0.000 description 13
- DGMOBVGABMBZSB-UHFFFAOYSA-N 2-methylpropanoyl chloride Chemical compound CC(C)C(Cl)=O DGMOBVGABMBZSB-UHFFFAOYSA-N 0.000 description 12
- JGFZNNIVVJXRND-UHFFFAOYSA-N N,N-Diisopropylethylamine (DIPEA) Chemical compound CCN(C(C)C)C(C)C JGFZNNIVVJXRND-UHFFFAOYSA-N 0.000 description 12
- 238000009396 hybridization Methods 0.000 description 12
- 229920005989 resin Polymers 0.000 description 12
- 239000011347 resin Substances 0.000 description 12
- 125000001424 substituent group Chemical group 0.000 description 12
- FPGGTKZVZWFYPV-UHFFFAOYSA-M tetrabutylammonium fluoride Chemical compound [F-].CCCC[N+](CCCC)(CCCC)CCCC FPGGTKZVZWFYPV-UHFFFAOYSA-M 0.000 description 12
- 230000015572 biosynthetic process Effects 0.000 description 11
- 238000004587 chromatography analysis Methods 0.000 description 11
- 235000019439 ethyl acetate Nutrition 0.000 description 11
- 230000006870 function Effects 0.000 description 11
- 108090000623 proteins and genes Proteins 0.000 description 11
- 230000002829 reductive effect Effects 0.000 description 11
- XKRFYHLGVUSROY-UHFFFAOYSA-N Argon Chemical compound [Ar] XKRFYHLGVUSROY-UHFFFAOYSA-N 0.000 description 10
- 239000002126 C01EB10 - Adenosine Substances 0.000 description 10
- 229960005305 adenosine Drugs 0.000 description 10
- 125000003342 alkenyl group Chemical group 0.000 description 10
- 230000006378 damage Effects 0.000 description 10
- 125000002962 imidazol-1-yl group Chemical group [*]N1C([H])=NC([H])=C1[H] 0.000 description 10
- 102000004169 proteins and genes Human genes 0.000 description 10
- 238000011160 research Methods 0.000 description 10
- 239000000126 substance Substances 0.000 description 10
- 125000003258 trimethylene group Chemical group [H]C([H])([*:2])C([H])([H])C([H])([H])[*:1] 0.000 description 10
- 108091027305 Heteroduplex Proteins 0.000 description 9
- UGQMRVRMYYASKQ-KQYNXXCUSA-N Inosine Chemical compound O[C@@H]1[C@H](O)[C@@H](CO)O[C@H]1N1C2=NC=NC(O)=C2N=C1 UGQMRVRMYYASKQ-KQYNXXCUSA-N 0.000 description 9
- 230000007022 RNA scission Effects 0.000 description 9
- 229910000831 Steel Inorganic materials 0.000 description 9
- 125000001797 benzyl group Chemical group [H]C1=C([H])C([H])=C(C([H])=C1[H])C([H])([H])* 0.000 description 9
- 125000000816 ethylene group Chemical group [H]C([H])([*:1])C([H])([H])[*:2] 0.000 description 9
- 238000002844 melting Methods 0.000 description 9
- 230000008018 melting Effects 0.000 description 9
- 239000000377 silicon dioxide Substances 0.000 description 9
- 239000010959 steel Substances 0.000 description 9
- 125000005931 tert-butyloxycarbonyl group Chemical group [H]C([H])([H])C(OC(*)=O)(C([H])([H])[H])C([H])([H])[H] 0.000 description 9
- 101710163270 Nuclease Proteins 0.000 description 8
- XXROGKLTLUQVRX-UHFFFAOYSA-N allyl alcohol Chemical compound OCC=C XXROGKLTLUQVRX-UHFFFAOYSA-N 0.000 description 8
- 210000004027 cell Anatomy 0.000 description 8
- 229910052739 hydrogen Inorganic materials 0.000 description 8
- 239000001257 hydrogen Substances 0.000 description 8
- PMZURENOXWZQFD-UHFFFAOYSA-L Sodium Sulfate Chemical compound [Na+].[Na+].[O-]S([O-])(=O)=O PMZURENOXWZQFD-UHFFFAOYSA-L 0.000 description 7
- 230000033228 biological regulation Effects 0.000 description 7
- 125000002496 methyl group Chemical group [H]C([H])([H])* 0.000 description 7
- 230000003285 pharmacodynamic effect Effects 0.000 description 7
- 238000000746 purification Methods 0.000 description 7
- 239000000725 suspension Substances 0.000 description 7
- 238000005160 1H NMR spectroscopy Methods 0.000 description 6
- WVDDGKGOMKODPV-UHFFFAOYSA-N Benzyl alcohol Chemical compound OCC1=CC=CC=C1 WVDDGKGOMKODPV-UHFFFAOYSA-N 0.000 description 6
- PTOAARAWEBMLNO-KVQBGUIXSA-N Cladribine Chemical compound C1=NC=2C(N)=NC(Cl)=NC=2N1[C@H]1C[C@H](O)[C@@H](CO)O1 PTOAARAWEBMLNO-KVQBGUIXSA-N 0.000 description 6
- 102000004190 Enzymes Human genes 0.000 description 6
- 108090000790 Enzymes Proteins 0.000 description 6
- UIIMBOGNXHQVGW-UHFFFAOYSA-M Sodium bicarbonate Chemical compound [Na+].OC([O-])=O UIIMBOGNXHQVGW-UHFFFAOYSA-M 0.000 description 6
- HUMNYLRZRPPJDN-UHFFFAOYSA-N benzaldehyde Chemical compound O=CC1=CC=CC=C1 HUMNYLRZRPPJDN-UHFFFAOYSA-N 0.000 description 6
- 238000005755 formation reaction Methods 0.000 description 6
- 239000000543 intermediate Substances 0.000 description 6
- 239000007788 liquid Substances 0.000 description 6
- 239000000463 material Substances 0.000 description 6
- 229910052698 phosphorus Inorganic materials 0.000 description 6
- 229910000073 phosphorus hydride Inorganic materials 0.000 description 6
- 229920000768 polyamine Polymers 0.000 description 6
- 238000002560 therapeutic procedure Methods 0.000 description 6
- 238000011282 treatment Methods 0.000 description 6
- RIOQSEWOXXDEQQ-UHFFFAOYSA-N triphenylphosphine Chemical compound C1=CC=CC=C1P(C=1C=CC=CC=1)C1=CC=CC=C1 RIOQSEWOXXDEQQ-UHFFFAOYSA-N 0.000 description 6
- CSNNHWWHGAXBCP-UHFFFAOYSA-L Magnesium sulfate Chemical compound [Mg+2].[O-][S+2]([O-])([O-])[O-] CSNNHWWHGAXBCP-UHFFFAOYSA-L 0.000 description 5
- 229910052786 argon Inorganic materials 0.000 description 5
- 125000003118 aryl group Chemical group 0.000 description 5
- 125000005842 heteroatom Chemical group 0.000 description 5
- 150000002391 heterocyclic compounds Chemical class 0.000 description 5
- 125000004437 phosphorous atom Chemical group 0.000 description 5
- 239000000843 powder Substances 0.000 description 5
- 238000002360 preparation method Methods 0.000 description 5
- 125000002924 primary amino group Chemical group [H]N([H])* 0.000 description 5
- 150000003254 radicals Chemical class 0.000 description 5
- 229910000104 sodium hydride Inorganic materials 0.000 description 5
- 241000894007 species Species 0.000 description 5
- 239000007858 starting material Substances 0.000 description 5
- 238000006467 substitution reaction Methods 0.000 description 5
- 238000003786 synthesis reaction Methods 0.000 description 5
- RYHBNJHYFVUHQT-UHFFFAOYSA-N 1,4-Dioxane Chemical compound C1COCCO1 RYHBNJHYFVUHQT-UHFFFAOYSA-N 0.000 description 4
- YKBGVTZYEHREMT-KVQBGUIXSA-N 2'-deoxyguanosine Chemical compound C1=NC=2C(=O)NC(N)=NC=2N1[C@H]1C[C@H](O)[C@@H](CO)O1 YKBGVTZYEHREMT-KVQBGUIXSA-N 0.000 description 4
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- RRTXKQSFZYOTNW-UHFFFAOYSA-N n-phosphanyl-n-propan-2-ylpropan-2-amine Chemical compound CC(C)N(P)C(C)C RRTXKQSFZYOTNW-UHFFFAOYSA-N 0.000 description 1
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- ZULLAVFVXBSWQQ-UHFFFAOYSA-N nitro hydrogen carbonate Chemical compound OC(=O)O[N+]([O-])=O ZULLAVFVXBSWQQ-UHFFFAOYSA-N 0.000 description 1
- 125000001893 nitrooxy group Chemical group [O-][N+](=O)O* 0.000 description 1
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- FJDUDHYHRVPMJZ-UHFFFAOYSA-N nonan-1-amine Chemical compound CCCCCCCCCN FJDUDHYHRVPMJZ-UHFFFAOYSA-N 0.000 description 1
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- PIDFDZJZLOTZTM-KHVQSSSXSA-N ombitasvir Chemical compound COC(=O)N[C@@H](C(C)C)C(=O)N1CCC[C@H]1C(=O)NC1=CC=C([C@H]2N([C@@H](CC2)C=2C=CC(NC(=O)[C@H]3N(CCC3)C(=O)[C@@H](NC(=O)OC)C(C)C)=CC=2)C=2C=CC(=CC=2)C(C)(C)C)C=C1 PIDFDZJZLOTZTM-KHVQSSSXSA-N 0.000 description 1
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- AQIXEPGDORPWBJ-UHFFFAOYSA-N pentan-3-ol Chemical compound CCC(O)CC AQIXEPGDORPWBJ-UHFFFAOYSA-N 0.000 description 1
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- 238000001556 precipitation Methods 0.000 description 1
- 230000002265 prevention Effects 0.000 description 1
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- WGYKZJWCGVVSQN-UHFFFAOYSA-N propylamine Chemical group CCCN WGYKZJWCGVVSQN-UHFFFAOYSA-N 0.000 description 1
- 230000007026 protein scission Effects 0.000 description 1
- 238000000425 proton nuclear magnetic resonance spectrum Methods 0.000 description 1
- 239000002718 pyrimidine nucleoside Substances 0.000 description 1
- 150000003230 pyrimidines Chemical class 0.000 description 1
- 230000014493 regulation of gene expression Effects 0.000 description 1
- 125000006853 reporter group Chemical group 0.000 description 1
- 230000000452 restraining effect Effects 0.000 description 1
- 230000000717 retained effect Effects 0.000 description 1
- PYWVYCXTNDRMGF-UHFFFAOYSA-N rhodamine B Chemical compound [Cl-].C=12C=CC(=[N+](CC)CC)C=C2OC2=CC(N(CC)CC)=CC=C2C=1C1=CC=CC=C1C(O)=O PYWVYCXTNDRMGF-UHFFFAOYSA-N 0.000 description 1
- 125000002652 ribonucleotide group Chemical group 0.000 description 1
- 235000009566 rice Nutrition 0.000 description 1
- 150000003839 salts Chemical class 0.000 description 1
- 239000004576 sand Substances 0.000 description 1
- 125000002914 sec-butyl group Chemical group [H]C([H])([H])C([H])([H])C([H])(*)C([H])([H])[H] 0.000 description 1
- 150000003335 secondary amines Chemical class 0.000 description 1
- 210000002966 serum Anatomy 0.000 description 1
- 238000006884 silylation reaction Methods 0.000 description 1
- 238000004088 simulation Methods 0.000 description 1
- 239000003998 snake venom Substances 0.000 description 1
- 239000012312 sodium hydride Substances 0.000 description 1
- KKCBUQHMOMHUOY-UHFFFAOYSA-N sodium oxide Chemical compound [O-2].[Na+].[Na+] KKCBUQHMOMHUOY-UHFFFAOYSA-N 0.000 description 1
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- 235000011152 sodium sulphate Nutrition 0.000 description 1
- 239000007790 solid phase Substances 0.000 description 1
- 108010068698 spleen exonuclease Proteins 0.000 description 1
- 239000012258 stirred mixture Substances 0.000 description 1
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- 125000000020 sulfo group Chemical group O=S(=O)([*])O[H] 0.000 description 1
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- 238000005987 sulfurization reaction Methods 0.000 description 1
- 230000008685 targeting Effects 0.000 description 1
- IOGXOCVLYRDXLW-UHFFFAOYSA-N tert-butyl nitrite Chemical compound CC(C)(C)ON=O IOGXOCVLYRDXLW-UHFFFAOYSA-N 0.000 description 1
- 239000012414 tert-butyl nitrite Substances 0.000 description 1
- ILMRJRBKQSSXGY-UHFFFAOYSA-N tert-butyl(dimethyl)silicon Chemical group C[Si](C)C(C)(C)C ILMRJRBKQSSXGY-UHFFFAOYSA-N 0.000 description 1
- 125000001412 tetrahydropyranyl group Chemical group 0.000 description 1
- 229940124597 therapeutic agent Drugs 0.000 description 1
- 150000003573 thiols Chemical class 0.000 description 1
- 125000003944 tolyl group Chemical group 0.000 description 1
- 231100000331 toxic Toxicity 0.000 description 1
- 230000002588 toxic effect Effects 0.000 description 1
- 150000003852 triazoles Chemical class 0.000 description 1
- 150000005691 triesters Chemical class 0.000 description 1
- 125000002023 trifluoromethyl group Chemical group FC(F)(F)* 0.000 description 1
- XFNJVJPLKCPIBV-UHFFFAOYSA-N trimethylenediamine Chemical compound NCCCN XFNJVJPLKCPIBV-UHFFFAOYSA-N 0.000 description 1
- 238000001665 trituration Methods 0.000 description 1
- 125000002221 trityl group Chemical group [H]C1=C([H])C([H])=C([H])C([H])=C1C([*])(C1=C(C(=C(C(=C1[H])[H])[H])[H])[H])C1=C([H])C([H])=C([H])C([H])=C1[H] 0.000 description 1
- 125000002948 undecyl group Chemical group [H]C([*])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])[H] 0.000 description 1
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- 125000000391 vinyl group Chemical group [H]C([*])=C([H])[H] 0.000 description 1
- 229920002554 vinyl polymer Polymers 0.000 description 1
- 125000005023 xylyl group Chemical group 0.000 description 1
Classifications
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- C07H—SUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
- C07H19/00—Compounds containing a hetero ring sharing one ring hetero atom with a saccharide radical; Nucleosides; Mononucleotides; Anhydro-derivatives thereof
- C07H19/02—Compounds containing a hetero ring sharing one ring hetero atom with a saccharide radical; Nucleosides; Mononucleotides; Anhydro-derivatives thereof sharing nitrogen
- C07H19/04—Heterocyclic radicals containing only nitrogen atoms as ring hetero atom
- C07H19/16—Purine radicals
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- A61P31/00—Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
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- C07H19/06—Pyrimidine radicals
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- C07J—STEROIDS
- C07J43/00—Normal steroids having a nitrogen-containing hetero ring spiro-condensed or not condensed with the cyclopenta(a)hydrophenanthrene skeleton
- C07J43/003—Normal steroids having a nitrogen-containing hetero ring spiro-condensed or not condensed with the cyclopenta(a)hydrophenanthrene skeleton not condensed
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Abstract
Description
Claims (1)
- 【特許請求の範囲】 1.次の式: [式中、Gは、CまたはNであり; Xは、NH2またはOHであり; Yは、RQまたはNHRQであり、ここでRはHまたは2から約20個の炭素原 子を有するヒドロカルビル基であり、Qは少なくとも1つの反応性または非反応 性官能基を含み;そして Zは、H、窒素保護基または糖部分である] を有する化合物。 2.Qが窒素含有複素環である、請求項1記載の化合物。 3.Qが置換または非置換イミダゾールである、請求項1記載の化合物。 4.YがRQであり、Qがイミダゾールである、請求項1記載の化合物。 5.YがNHRQであり、Qがイミダゾールである、請求項1記載の化合物。 6.GがNであり;XがNH2であり;YがNHRQであり、ここでRは低級ア ルカンであり、Qはイミダゾールである、請求項1記載の化合物。 7.Rが約2から約4個の炭素原子を有するアルカンである、請求項6記載の化 合物。 8.Zがリボースまたはデオキシリボースである、請求項7記載の化合物。 9.Rがプロピルである、請求項6記載の化合物。 10.Zがリボースまたはデオキシリボースである、請求項9記載の化合物。 11.GがNであり;XがOHであり;YがNHRQであり、ここでRは低級ア ルカンであり、Qはイミダゾールである、請求項1記載の化合物。 12.Rが約2から約4個の炭素原子を有するアルカンである、請求項11記載 の化合物。 13.Zがリボースまたはデオキシリボースである、請求項11記載の化合物。 14.Zがリボースまたはデオキシリボースである、請求項12記載の化合物。 15.Rがプロピルである、請求項11記載の化合物。 16.Zがリボースまたはデオキシリボースである、請求項15記載の化合物。 17.Rがエチルである、請求項11記載の化合物。 18.Zがリボースまたはデオキシリボースである、請求項17記載の化合物。 19.Rがイソブチリルであり、Qがメチルイミダゾールである、請求項11記 載の化合物。 20.Zがリボースまたはデオキシリボースである、請求項19記載の化合物。 21.GがNであり;XがNH2であり;YがNHRQであり、ここでRはHで あり、Qは約5個から約20個の炭素原子を有する、請求項1記載の化合物。 22.Zがリボースまたはデオキシリボースである、請求項21記載の化合物。 23.GがNであり;XがOHであり;YがNHRQであり、ここでRはHであ り、Qは約5個から約20個の炭素原子を有するアルカンである、請求項1記載 の化合物。 24.Qがノニルである、請求項23記載の化合物。 25.Zがリボースまたはデオキシリボースである、請求項24記載の化合物。 26.Qがイソブチリルノナンである、請求項23記載の化合物。 27.Zがリボースまたはデオキシリボースである、請求項26記載の化合物。 28.YがRQであり、ここでRは低級アルカンであり、Qはアミンであり、前 記アミンは、NH2、ポリアルキルアミン、アミノアルキルアミン、ヒドラジン (−NH−NH−)、ヒドロキシルアミン(−NH−OH)、セミカルバジド( −NH−C(O)−NH−NH2)、チオセミカルバジド(−NH−C(S)− NH−NH2)、ヒドラゾン(−N=NH)、またはヒドラジド(−C(O)− NH−NH2)である、請求項1記載の化合物。 29.YがNHRQであり、ここでRは低級アルカンであり、Qはアミンであり 、前記アミンは、NH2、ポリアルキルアミン、アミノアルキルアミン、ヒドラ ジ ン(−NH−NH−)、ヒドロキシルアミン(−NH−OH)、セミカルバジド (−NH−C(O)−NH−NH2)、チオセミカルバジド(−NH−C(S) −NH−NH2)、ヒドラゾン(−N=NH)、またはヒドラジド(−C(O) −NH−NH2)であり;そしてZはリボースまたはデオキシリボースである、 請求項1記載の化合物。 30.GがNであり;XがNH2であり;YがNHRQであり、ここでRは低級 アルカンであり、Qはアミンであり、前記アミンは、NH2、ポリアルキルアミ ン、アミノアルキルアミン、ヒドラジン(−NH−NH−)、ヒドロキシルアミ ン(−NH−OH)、セミカルバジド(−NH−C(O)−NH−NH2)、チ オセミカルバジド(−NH−C(S)−NH−NH2)、ヒドラゾン(−N=N H)、またはヒドラジド(−C(O)−NH−NH2)である、請求項1記載の 化合物。 31.前記アミンがNH2である、請求項30記載の化合物。 32.Zがリボースまたはデオキシリボースである、請求項31記載の化合物。 33.GがNであり;XがOHであり;YがNHRQであり、ここでRは低級ア ルカンであり、Qはアミンであり、前記アミンは、NH2、ポリアルキルアミン 、アミノアルキルアミン、ヒドラジン(−NH−NH−)、ヒドロキシルアミン (−NH−OH)、セミカルバジド(−NH−C(O)−NH−NH2)、チオ セミカルバジド(−NH−C(S)−NH−NH2)、ヒドラゾン(−N=NH )、またはヒドラジド(−C(O)−NH−NH2)である、請求項1記載の化 合物。 34.Zがリボースまたはデオキシリボースである、請求項33記載の化合物。 35.前記アミンがNH2である、請求項33記載の化合物。 36.Zがリボースまたはデオキシリボースである、請求項35記載の化合物。 37.Rがヘキサンであり、QがNH2である、請求項33記載の化合物。 38.Zがリボースまたはデオキシリボースである、請求項37記載の化合物。 39.YがNHRQであり、ここでQは、チオール基、アルデヒド、ケトン、ア ルコール、アルコキシ基またはハロゲンである、請求項1記載の化合物。 40.Zがリボースまたはデオキシリボースである、請求項39記載の化合物。 41.YがRQであり、ここでQはチオール基、アルデヒド、ケトン、アルコー ル、アルコキシ基またはハロゲンである、請求項1記載の化合物。 42.Zがリボースまたはデオキシリボースである、請求項41記載の化合物。 43.YがNHRQであり、ここでQは、チオール基、アルデヒド、ケトン、ア ルコール、アルコキシ基、またはハロゲンである、請求項1記載の化合物。 44.Zがリボースまたはデオキシリボースである、請求項43記載の化合物。 45.さらに、糖部分の3’位にホスフェート基を有し、ここで前記ホスフェー ト基は天然のホスフェートまたは修飾ホスフェートでありうる、請求項1記載の 化合物。 46.前記糖部分がリボースまたはデオキシリボースである、請求項45記載の 化合物。 47.前記糖部分がリボースまたはデオキシリボースであり、前記修飾ホスフェ ートがメチルホスホネート、ホスホロチオエート、ホスホルアミダイトまたはホ スホロトリエステルである、請求項45記載の化合物。 48.少なくとも1つの請求項1記載の化合物を有する、混合配列のオリゴヌク レオチド 49.RNAのRNaseH開裂を行うためのオリゴヌクレオチドであって、第 1のオリゴヌクレオチド領域および第2のヌクレオチド領域を含み; 前記第1の領域および前記第2の領域は一緒になって、前記RNAの少なくとも 一部に本質的に相補的なヌクレオチド配列であり; 前記第1の領域は、少なくとも1つの請求項1記載のヌクレオチドを含み; 前記第2の領域は、2’−デオキシ−エリスロ−ペントフラノシル糖部分を有す る複数の連続するホスホロチオエート連結ヌクレオチドを含む; ことを特徴とするオリゴヌクレオチド。 50.さらに、前記オリゴヌクレオチドの第3の領域を含み、前記第3の領域は 少なくとも1つの請求項1記載のヌクレオチドを含み; ここで前記第2の領域は、前記オリゴヌクレオチド中で前記第1の領域と前記第 3の領域との間に位置する; ことを特徴とする、請求項49記載のオリゴヌクレオチド。
Applications Claiming Priority (3)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US08/159,088 | 1993-11-29 | ||
| US08/159,088 US5459255A (en) | 1990-01-11 | 1993-11-29 | N-2 substituted purines |
| PCT/US1994/013622 WO1995014707A1 (en) | 1993-11-29 | 1994-11-29 | N-2 substituted purines |
Publications (2)
| Publication Number | Publication Date |
|---|---|
| JPH09500398A true JPH09500398A (ja) | 1997-01-14 |
| JP3535519B2 JP3535519B2 (ja) | 2004-06-07 |
Family
ID=22571037
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| JP51525895A Expired - Fee Related JP3535519B2 (ja) | 1993-11-29 | 1994-11-29 | N−2置換プリン類 |
Country Status (6)
| Country | Link |
|---|---|
| US (4) | US5459255A (ja) |
| EP (1) | EP0731807B1 (ja) |
| JP (1) | JP3535519B2 (ja) |
| AT (1) | ATE261984T1 (ja) |
| DE (1) | DE69433626T2 (ja) |
| WO (1) | WO1995014707A1 (ja) |
Cited By (3)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| WO1999021874A1 (en) * | 1997-10-27 | 1999-05-06 | Sankyo Company, Limited | Oligodeoxyribonucleotides containing modified nucleoside and the like |
| WO2013122236A1 (ja) * | 2012-02-17 | 2013-08-22 | 味の素株式会社 | 塩基部保護オリゴヌクレオチド |
| US8846885B2 (en) | 2012-02-17 | 2014-09-30 | Ajinomoto Co., Inc. | Oligonucleotide with protected base |
Families Citing this family (1050)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
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-
1993
- 1993-11-29 US US08/159,088 patent/US5459255A/en not_active Expired - Lifetime
-
1994
- 1994-11-29 EP EP95902698A patent/EP0731807B1/en not_active Expired - Lifetime
- 1994-11-29 WO PCT/US1994/013622 patent/WO1995014707A1/en not_active Ceased
- 1994-11-29 JP JP51525895A patent/JP3535519B2/ja not_active Expired - Fee Related
- 1994-11-29 DE DE69433626T patent/DE69433626T2/de not_active Expired - Lifetime
- 1994-11-29 AT AT95902698T patent/ATE261984T1/de not_active IP Right Cessation
-
1995
- 1995-08-30 US US08/473,450 patent/US5587469A/en not_active Expired - Lifetime
-
1996
- 1996-12-10 US US08/762,587 patent/US5808027A/en not_active Expired - Fee Related
-
1998
- 1998-08-04 US US09/128,834 patent/US6166199A/en not_active Expired - Fee Related
Cited By (5)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| WO1999021874A1 (en) * | 1997-10-27 | 1999-05-06 | Sankyo Company, Limited | Oligodeoxyribonucleotides containing modified nucleoside and the like |
| WO2013122236A1 (ja) * | 2012-02-17 | 2013-08-22 | 味の素株式会社 | 塩基部保護オリゴヌクレオチド |
| US8846885B2 (en) | 2012-02-17 | 2014-09-30 | Ajinomoto Co., Inc. | Oligonucleotide with protected base |
| JPWO2013122236A1 (ja) * | 2012-02-17 | 2015-05-18 | 味の素株式会社 | 塩基部保護オリゴヌクレオチド |
| US9371353B2 (en) | 2012-02-17 | 2016-06-21 | Ajinomoto Co., Inc. | Oligonucleotide with protected base |
Also Published As
| Publication number | Publication date |
|---|---|
| US5808027A (en) | 1998-09-15 |
| EP0731807A1 (en) | 1996-09-18 |
| US5587469A (en) | 1996-12-24 |
| EP0731807B1 (en) | 2004-03-17 |
| ATE261984T1 (de) | 2004-04-15 |
| US5459255A (en) | 1995-10-17 |
| DE69433626T2 (de) | 2005-02-10 |
| WO1995014707A1 (en) | 1995-06-01 |
| EP0731807A4 (en) | 1997-11-19 |
| JP3535519B2 (ja) | 2004-06-07 |
| US6166199A (en) | 2000-12-26 |
| DE69433626D1 (de) | 2004-04-22 |
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