NO20083957L - DNA-konformasjon - Google Patents

DNA-konformasjon

Info

Publication number
NO20083957L
NO20083957L NO20083957A NO20083957A NO20083957L NO 20083957 L NO20083957 L NO 20083957L NO 20083957 A NO20083957 A NO 20083957A NO 20083957 A NO20083957 A NO 20083957A NO 20083957 L NO20083957 L NO 20083957L
Authority
NO
Norway
Prior art keywords
individual
dna conformation
gene expression
abnormal gene
diagnosis
Prior art date
Application number
NO20083957A
Other languages
English (en)
Other versions
NO343718B1 (no
Inventor
Alexandre Akoulitchev
Aroul Selvam Ramadass
Leonid Leonidovich Nikitenko
Original Assignee
Isis Innovation
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Isis Innovation filed Critical Isis Innovation
Publication of NO20083957L publication Critical patent/NO20083957L/no
Publication of NO343718B1 publication Critical patent/NO343718B1/no

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6809—Methods for determination or identification of nucleic acids involving differential detection
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6883—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6883—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
    • C12Q1/6886—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material for cancer
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/136—Screening for pharmacological compounds
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/16—Primer sets for multiplex assays

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Health & Medical Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Engineering & Computer Science (AREA)
  • Analytical Chemistry (AREA)
  • Genetics & Genomics (AREA)
  • Immunology (AREA)
  • Molecular Biology (AREA)
  • General Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Biotechnology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Health & Medical Sciences (AREA)
  • Biochemistry (AREA)
  • Biophysics (AREA)
  • Physics & Mathematics (AREA)
  • Pathology (AREA)
  • Hospice & Palliative Care (AREA)
  • Oncology (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
  • Micro-Organisms Or Cultivation Processes Thereof (AREA)
  • Breeding Of Plants And Reproduction By Means Of Culturing (AREA)
  • Medicines That Contain Protein Lipid Enzymes And Other Medicines (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Saccharide Compounds (AREA)
  • General Chemical & Material Sciences (AREA)
  • Pharmaceuticals Containing Other Organic And Inorganic Compounds (AREA)

Abstract

Fremgangsmåte for deteksjon eller diagnose av abnorm genekspresjon i et individ omfattende å bestemme, i en prøve fra individet, tilstedeværelse eller fravær av en kromosomstruktur hvor to separate områder av genet plasseres i nærheten av hverandre, for derved å detektere eller diagnostisere om individet har abnorm genekspresjon.
NO20083957A 2006-02-17 2008-09-17 Fremgangsmåte for diagnose av kreft ved påvisning av tilstedeværelse av en abnormal kromosomstruktur NO343718B1 (no)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
GBGB0603251.0A GB0603251D0 (en) 2006-02-17 2006-02-17 DNA conformation
PCT/GB2007/000564 WO2007093819A2 (en) 2006-02-17 2007-02-19 Dna conformation (loop structures) in normal and abnormal gene expression

Publications (2)

Publication Number Publication Date
NO20083957L true NO20083957L (no) 2008-11-14
NO343718B1 NO343718B1 (no) 2019-05-20

Family

ID=36142050

Family Applications (1)

Application Number Title Priority Date Filing Date
NO20083957A NO343718B1 (no) 2006-02-17 2008-09-17 Fremgangsmåte for diagnose av kreft ved påvisning av tilstedeværelse av en abnormal kromosomstruktur

Country Status (15)

Country Link
US (2) US9777327B2 (no)
EP (1) EP1991697B1 (no)
JP (1) JP5345857B2 (no)
CN (1) CN101384734B (no)
AT (1) ATE519864T1 (no)
AU (1) AU2007216315B2 (no)
CA (1) CA2642331C (no)
DK (1) DK1991697T3 (no)
ES (1) ES2368767T3 (no)
GB (1) GB0603251D0 (no)
MY (1) MY182608A (no)
NO (1) NO343718B1 (no)
NZ (1) NZ571201A (no)
WO (1) WO2007093819A2 (no)
ZA (1) ZA200807948B (no)

Families Citing this family (58)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
GB0603251D0 (en) 2006-02-17 2006-03-29 Isis Innovation DNA conformation
AU2009207922B2 (en) 2008-01-23 2015-05-14 Herlev Hospital YKL-40 as a general marker for non-specific disease
GB0810051D0 (en) * 2008-06-02 2008-07-09 Oxford Biodynamics Ltd Method of diagnosis
NZ592241A (en) 2008-09-15 2012-11-30 Herlev Hospital Ykl-40 as a marker for gastrointestinal cancers
WO2012005595A2 (en) * 2010-07-09 2012-01-12 Wouter Leonard De Laat V3-d genomic region of interest sequencing strategies
US9701998B2 (en) 2012-12-14 2017-07-11 10X Genomics, Inc. Methods and systems for processing polynucleotides
US10584381B2 (en) 2012-08-14 2020-03-10 10X Genomics, Inc. Methods and systems for processing polynucleotides
US11591637B2 (en) 2012-08-14 2023-02-28 10X Genomics, Inc. Compositions and methods for sample processing
CA3216609C (en) 2012-08-14 2024-05-14 10X Genomics, Inc. Microcapsule compositions and methods
US10752949B2 (en) 2012-08-14 2020-08-25 10X Genomics, Inc. Methods and systems for processing polynucleotides
US10221442B2 (en) 2012-08-14 2019-03-05 10X Genomics, Inc. Compositions and methods for sample processing
US10323279B2 (en) 2012-08-14 2019-06-18 10X Genomics, Inc. Methods and systems for processing polynucleotides
US9951386B2 (en) 2014-06-26 2018-04-24 10X Genomics, Inc. Methods and systems for processing polynucleotides
US10273541B2 (en) 2012-08-14 2019-04-30 10X Genomics, Inc. Methods and systems for processing polynucleotides
WO2014093676A1 (en) 2012-12-14 2014-06-19 10X Technologies, Inc. Methods and systems for processing polynucleotides
US10533221B2 (en) 2012-12-14 2020-01-14 10X Genomics, Inc. Methods and systems for processing polynucleotides
US9411930B2 (en) * 2013-02-01 2016-08-09 The Regents Of The University Of California Methods for genome assembly and haplotype phasing
AU2014214682B2 (en) 2013-02-08 2018-07-26 10X Genomics, Inc. Polynucleotide barcode generation
EP4321628B1 (en) 2013-05-23 2025-09-03 The Board of Trustees of the Leland Stanford Junior University Transposition into native chromatin for personal epigenomics
WO2015157567A1 (en) 2014-04-10 2015-10-15 10X Genomics, Inc. Fluidic devices, systems, and methods for encapsulating and partitioning reagents, and applications of same
MX2016016904A (es) 2014-06-26 2017-03-27 10X Genomics Inc Analisis de secuencias de acidos nucleicos.
US12312640B2 (en) 2014-06-26 2025-05-27 10X Genomics, Inc. Analysis of nucleic acid sequences
CN113249435B (zh) 2014-06-26 2024-09-03 10X基因组学有限公司 分析来自单个细胞或细胞群体的核酸的方法
CA2956925C (en) 2014-08-01 2024-02-13 Dovetail Genomics, Llc Tagging nucleic acids for sequence assembly
MX2017005267A (es) 2014-10-29 2017-07-26 10X Genomics Inc Metodos y composiciones para la secuenciacion de acidos nucleicos seleccionados como diana.
US9975122B2 (en) 2014-11-05 2018-05-22 10X Genomics, Inc. Instrument systems for integrated sample processing
SG11201705615UA (en) 2015-01-12 2017-08-30 10X Genomics Inc Processes and systems for preparing nucleic acid sequencing libraries and libraries prepared using same
NZ734854A (en) 2015-02-17 2022-11-25 Dovetail Genomics Llc Nucleic acid sequence assembly
EP4286516A3 (en) 2015-02-24 2024-03-06 10X Genomics, Inc. Partition processing methods and systems
BR112017018054A2 (pt) 2015-02-24 2018-07-24 10X Genomics Inc métodos para a cobertura de sequências de ácidos nucleicos direcionadas
US11807896B2 (en) 2015-03-26 2023-11-07 Dovetail Genomics, Llc Physical linkage preservation in DNA storage
US11802305B2 (en) * 2015-06-24 2023-10-31 Oxford BioDynamics PLC Detection processes using sites of chromosome interaction
CA3002740A1 (en) 2015-10-19 2017-04-27 Dovetail Genomics, Llc Methods for genome assembly, haplotype phasing, and target independent nucleic acid detection
SG11201804086VA (en) 2015-12-04 2018-06-28 10X Genomics Inc Methods and compositions for nucleic acid analysis
JP7441003B2 (ja) 2016-02-23 2024-02-29 ダブテイル ゲノミクス エルエルシー ゲノムアセンブリのためのフェージングされたリードセットの生成とハプロタイプフェージング
GB201608000D0 (en) 2016-05-06 2016-06-22 Oxford Biodynamics Ltd Chromosome detection
WO2017197343A2 (en) 2016-05-12 2017-11-16 10X Genomics, Inc. Microfluidic on-chip filters
WO2017197338A1 (en) 2016-05-13 2017-11-16 10X Genomics, Inc. Microfluidic systems and methods of use
WO2017197300A1 (en) 2016-05-13 2017-11-16 Dovetail Genomics Llc Recovering long-range linkage information from preserved samples
MY190153A (en) * 2016-12-01 2022-03-31 Oxford BioDynamics PLC Application of epigenetic chromosomal interactions in cancer diagnostics
US10815525B2 (en) 2016-12-22 2020-10-27 10X Genomics, Inc. Methods and systems for processing polynucleotides
US10550429B2 (en) 2016-12-22 2020-02-04 10X Genomics, Inc. Methods and systems for processing polynucleotides
US10011872B1 (en) 2016-12-22 2018-07-03 10X Genomics, Inc. Methods and systems for processing polynucleotides
CN110225981B (zh) * 2016-12-23 2024-03-15 牛津生物动力有限责任公司 分型方法
CN110214186B (zh) 2017-01-30 2023-11-24 10X基因组学有限公司 用于基于微滴的单细胞条形编码的方法和系统
US12264411B2 (en) 2017-01-30 2025-04-01 10X Genomics, Inc. Methods and systems for analysis
CN109526228B (zh) 2017-05-26 2022-11-25 10X基因组学有限公司 转座酶可接近性染色质的单细胞分析
US10844372B2 (en) 2017-05-26 2020-11-24 10X Genomics, Inc. Single cell analysis of transposase accessible chromatin
ES2987603T3 (es) 2017-11-03 2024-11-15 Oxford BioDynamics PLC Regulación genética de la respuesta inmunitaria por interacciones cromosómicas
EP3954782A1 (en) 2017-11-15 2022-02-16 10X Genomics, Inc. Functionalized gel beads
US10829815B2 (en) 2017-11-17 2020-11-10 10X Genomics, Inc. Methods and systems for associating physical and genetic properties of biological particles
WO2019152543A1 (en) 2018-01-31 2019-08-08 Dovetail Genomics, Llc Sample prep for dna linkage recovery
CN112004920B (zh) 2018-02-05 2024-08-02 斯坦福大学托管董事会 用于单细胞和集合细胞的多重测量的系统和方法
CN112262218B (zh) 2018-04-06 2024-11-08 10X基因组学有限公司 用于单细胞处理中的质量控制的系统和方法
CA3128973A1 (en) 2019-03-04 2020-09-10 Bhaskar Bhattacharyya Data compression and communication using machine learning
AU2020381516A1 (en) * 2019-11-15 2022-06-02 Phase Genomics Inc. Chromosome conformation capture from tissue samples
CN114550817B (zh) * 2022-01-25 2022-12-23 云南大学 基于多特征的ctcf介导染色质环预测方法
CN114841294B (zh) * 2022-07-04 2022-10-28 杭州德适生物科技有限公司 一种检测染色体结构异常的分类器模型训练方法及装置

Family Cites Families (7)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
AU2002220521A1 (en) 2000-11-29 2002-06-11 Statens Seruminstitut A screening assay for detecting chromosome rearrangements or recombinations
CN1231596C (zh) * 2001-12-27 2005-12-14 赵兴波 利用线粒体dna指纹进行动物遗传信息鉴定的方法
CN1515692A (zh) * 2003-01-02 2004-07-28 缪金明 “锚定点灯”式寡核苷酸芯片的检测技术
EP2295604B1 (en) 2004-02-09 2015-04-08 Thomas Jefferson University Diagnosis and treatment of cancers with microRNA located in or near cancer-associated chromosomal features
US20060015264A1 (en) 2004-06-02 2006-01-19 Mcshea Andrew Interfering stem-loop sequences and method for identifying
CA2614118C (en) * 2005-07-04 2013-11-26 Erasmus University Medical Center 4c
GB0603251D0 (en) 2006-02-17 2006-03-29 Isis Innovation DNA conformation

Also Published As

Publication number Publication date
MY182608A (en) 2021-01-26
JP2009526543A (ja) 2009-07-23
DK1991697T3 (da) 2011-09-19
HK1125416A1 (en) 2009-08-07
CA2642331A1 (en) 2007-08-23
JP5345857B2 (ja) 2013-11-20
ZA200807948B (en) 2009-11-25
AU2007216315B2 (en) 2012-10-04
CA2642331C (en) 2018-06-19
EP1991697B1 (en) 2011-08-10
ATE519864T1 (de) 2011-08-15
NO343718B1 (no) 2019-05-20
US11384396B2 (en) 2022-07-12
CN101384734B (zh) 2013-10-30
ES2368767T3 (es) 2011-11-22
WO2007093819A2 (en) 2007-08-23
AU2007216315A1 (en) 2007-08-23
US9777327B2 (en) 2017-10-03
US20180080081A1 (en) 2018-03-22
GB0603251D0 (en) 2006-03-29
CN101384734A (zh) 2009-03-11
EP1991697A2 (en) 2008-11-19
US20090186352A1 (en) 2009-07-23
NZ571201A (en) 2011-07-29
WO2007093819A3 (en) 2007-10-04

Similar Documents

Publication Publication Date Title
NO20083957L (no) DNA-konformasjon
AR088827A1 (es) Metodos para tratar, diagnosticar, y monitorear la enfermedad de alzheimer
HK1211624A1 (en) Methods for profiling and quantitating cell-free rna
BR112014031365A2 (pt) métodos de detectar doenças ou condições
EP2115158A4 (en) DATA PROCESSING AND METHOD OF ANALYZING GENE EXPRESSION DATA TO IDENTIFY ENDOGENOUS REFERENCE GENES
EP2516681A4 (en) COMPOSITIONS AND METHOD FOR DETECTING SMALL RNAS
EP4303584A3 (en) Methods for detecting signatures of disease or conditions in bodily fluids
WO2009100188A3 (en) Methods for detection of corn event das-59132
NZ594751A (en) Method of diagnosis of infection by mycobacteria and reagents therefor
WO2012019193A3 (en) Assay systems for genetic analysis
EA201390149A1 (ru) Способы выявления заболевания или патологических состояний с использованием фагоцитарных клеток
WO2008122670A3 (en) Human diabetes susceptibility tnfrsf10b gene
CY1122360T1 (el) Μεθοδος για τη διαγνωση της νοσου niemann-pick
DE602008006254D1 (de) Doppel-oligonukleotid-nukleinsäurenachweisverfahren
WO2010046648A3 (en) Diagnostic test for streptococcus equi
WO2015070191A3 (en) Systems and methods for detection of genomic variants
EP1988178A3 (en) Nucleotide primer set and nucleotide probe for detecting genotype of serum amyloid A1(SAA1)
WO2011020906A3 (en) sPLA2 IIA POLYMORPHISM ANALYSIS FOR THE DIAGNOSIS/PROGNOSIS OF A CARDIOVASCULAR DISEASE/EVENT
DE602007007697D1 (de) Verfahren zur Ermittlung von Arzneimittelempfindlichkeit durch Analyse von GIRK-Kanal-Genen
WO2013043041A3 (en) Methods and compositions for diagnosing familial hypercholesterolemia
WO2012034013A3 (en) Detection of rna-interacting regions in dna
WO2008032218A3 (en) Diagnosis of hereditary spastic paraplegias (hsp) by detection of a mutation in the kiaa1840 gene or protein
WO2012163941A3 (en) Marker for the detection and classification of leukemia from blood samples
WO2012045324A8 (en) Method for detecting a parkinson's disease and test system
WO2009066454A1 (ja) 異常型プリオン蛋白質結合剤および異常型プリオン蛋白質の検出方法