PL3636776T3 - Sposoby analizy informacji o sekwencji kwasów nukleinowych z wykorzystaniem odchylenia gc, opcjonalnie do wykrywania nieprawidłowości kwasów nukleinowych płodu - Google Patents

Sposoby analizy informacji o sekwencji kwasów nukleinowych z wykorzystaniem odchylenia gc, opcjonalnie do wykrywania nieprawidłowości kwasów nukleinowych płodu

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Publication number
PL3636776T3
PL3636776T3 PL19197417.9T PL19197417T PL3636776T3 PL 3636776 T3 PL3636776 T3 PL 3636776T3 PL 19197417 T PL19197417 T PL 19197417T PL 3636776 T3 PL3636776 T3 PL 3636776T3
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Poland
Prior art keywords
nucleic acid
bias
optionally
methods
sequence information
Prior art date
Application number
PL19197417.9T
Other languages
English (en)
Inventor
Stanley N. Lapidus
John F. Thompson
Doron Lipson
Patrice M. Milos
J. William Efcavitch
Stanley Letovsky
Original Assignee
Sequenom, Inc.
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Priority claimed from US12/709,057 external-priority patent/US20100216151A1/en
Application filed by Sequenom, Inc. filed Critical Sequenom, Inc.
Publication of PL3636776T3 publication Critical patent/PL3636776T3/pl

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Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6809—Methods for determination or identification of nucleic acids involving differential detection
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6883—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/10—Ploidy or copy number detection
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/20—Allele or variant detection, e.g. single nucleotide polymorphism [SNP] detection
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/156—Polymorphic or mutational markers
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y02—TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
    • Y02A—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
    • Y02A90/00—Technologies having an indirect contribution to adaptation to climate change
    • Y02A90/10—Information and communication technologies [ICT] supporting adaptation to climate change, e.g. for weather forecasting or climate simulation

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Engineering & Computer Science (AREA)
  • Organic Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Analytical Chemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Genetics & Genomics (AREA)
  • Molecular Biology (AREA)
  • Biophysics (AREA)
  • Biotechnology (AREA)
  • General Health & Medical Sciences (AREA)
  • Immunology (AREA)
  • General Engineering & Computer Science (AREA)
  • Biochemistry (AREA)
  • Microbiology (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Evolutionary Biology (AREA)
  • Medical Informatics (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Theoretical Computer Science (AREA)
  • Pathology (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
PL19197417.9T 2010-02-19 2011-02-09 Sposoby analizy informacji o sekwencji kwasów nukleinowych z wykorzystaniem odchylenia gc, opcjonalnie do wykrywania nieprawidłowości kwasów nukleinowych płodu PL3636776T3 (pl)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US12/709,057 US20100216151A1 (en) 2004-02-27 2010-02-19 Methods for detecting fetal nucleic acids and diagnosing fetal abnormalities
US12/727,824 US20100216153A1 (en) 2004-02-27 2010-03-19 Methods for detecting fetal nucleic acids and diagnosing fetal abnormalities

Publications (1)

Publication Number Publication Date
PL3636776T3 true PL3636776T3 (pl) 2025-03-03

Family

ID=44483527

Family Applications (2)

Application Number Title Priority Date Filing Date
PL11745050T PL2536852T3 (pl) 2010-02-19 2011-02-09 Sposoby wykrywania płodowych kwasów nukleinowych i diagnozowanie płodowych nieprawidłowości
PL19197417.9T PL3636776T3 (pl) 2010-02-19 2011-02-09 Sposoby analizy informacji o sekwencji kwasów nukleinowych z wykorzystaniem odchylenia gc, opcjonalnie do wykrywania nieprawidłowości kwasów nukleinowych płodu

Family Applications Before (1)

Application Number Title Priority Date Filing Date
PL11745050T PL2536852T3 (pl) 2010-02-19 2011-02-09 Sposoby wykrywania płodowych kwasów nukleinowych i diagnozowanie płodowych nieprawidłowości

Country Status (9)

Country Link
US (4) US20100216153A1 (pl)
EP (3) EP3636776B1 (pl)
CN (2) CN109411017A (pl)
AU (2) AU2011218382B2 (pl)
ES (1) ES3001090T3 (pl)
HU (1) HUE047618T2 (pl)
PL (2) PL2536852T3 (pl)
PT (1) PT2536852T (pl)
WO (1) WO2011102998A2 (pl)

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AU2011218382A1 (en) 2012-10-11
ES3001090T3 (es) 2025-03-04
CN103108960A (zh) 2013-05-15
EP3636776C0 (en) 2024-10-09
AU2015246128A1 (en) 2015-11-12
EP4455309A3 (en) 2025-01-22
PT2536852T (pt) 2019-11-19
US20140322709A1 (en) 2014-10-30
AU2011218382B2 (en) 2015-07-30
EP4455309A2 (en) 2024-10-30
EP2536852A4 (en) 2015-12-30
EP2536852B1 (en) 2019-09-18
HUE047618T2 (hu) 2020-04-28
US20210301337A1 (en) 2021-09-30
CN109411017A (zh) 2019-03-01
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EP3636776A1 (en) 2020-04-15
WO2011102998A2 (en) 2011-08-25
US20100216153A1 (en) 2010-08-26
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EP2536852A2 (en) 2012-12-26
US20130022977A1 (en) 2013-01-24

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