ATE431433T1 - Ligation und amplifikationsreaktionen zur bestimmung von zielmolekülen - Google Patents

Ligation und amplifikationsreaktionen zur bestimmung von zielmolekülen

Info

Publication number
ATE431433T1
ATE431433T1 AT05760637T AT05760637T ATE431433T1 AT E431433 T1 ATE431433 T1 AT E431433T1 AT 05760637 T AT05760637 T AT 05760637T AT 05760637 T AT05760637 T AT 05760637T AT E431433 T1 ATE431433 T1 AT E431433T1
Authority
AT
Austria
Prior art keywords
present
encoding
reaction
ligation
sample
Prior art date
Application number
AT05760637T
Other languages
English (en)
Inventor
Mark R Andersen
Kenneth J Livak
Adam Broomer
Caifu Chen
Original Assignee
Applied Biosystems Llc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Applied Biosystems Llc filed Critical Applied Biosystems Llc
Application granted granted Critical
Publication of ATE431433T1 publication Critical patent/ATE431433T1/de

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Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844—Nucleic acid amplification reactions
    • C12Q1/6851—Quantitative amplification

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Biochemistry (AREA)
  • Biotechnology (AREA)
  • Molecular Biology (AREA)
  • Biophysics (AREA)
  • Analytical Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Immunology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
AT05760637T 2004-03-24 2005-03-24 Ligation und amplifikationsreaktionen zur bestimmung von zielmolekülen ATE431433T1 (de)

Applications Claiming Priority (6)

Application Number Priority Date Filing Date Title
US55622404P 2004-03-24 2004-03-24
US55616204P 2004-03-24 2004-03-24
US55615704P 2004-03-24 2004-03-24
US55616304P 2004-03-24 2004-03-24
US63068104P 2004-11-24 2004-11-24
PCT/US2005/010184 WO2005098040A2 (en) 2004-03-24 2005-03-24 Ligation and amplification reactions for determining target molecules

Publications (1)

Publication Number Publication Date
ATE431433T1 true ATE431433T1 (de) 2009-05-15

Family

ID=35064420

Family Applications (2)

Application Number Title Priority Date Filing Date
AT05732398T ATE399884T1 (de) 2004-03-24 2005-03-24 Codierungs- und decodierungsreaktionen zur bestimmung von target-polynukleotiden
AT05760637T ATE431433T1 (de) 2004-03-24 2005-03-24 Ligation und amplifikationsreaktionen zur bestimmung von zielmolekülen

Family Applications Before (1)

Application Number Title Priority Date Filing Date
AT05732398T ATE399884T1 (de) 2004-03-24 2005-03-24 Codierungs- und decodierungsreaktionen zur bestimmung von target-polynukleotiden

Country Status (6)

Country Link
US (2) US7604937B2 (de)
EP (3) EP1730312B1 (de)
JP (2) JP2007530051A (de)
AT (2) ATE399884T1 (de)
DE (2) DE602005007874D1 (de)
WO (2) WO2005094532A2 (de)

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WO2006034387A1 (en) * 2004-09-21 2006-03-30 Applera Corporation TWO-COLOR REAL-TIME/END-POINT QUANTITATION OF MICRORNAS (miRNAs)
DE602006018472D1 (de) 2005-07-15 2011-01-05 Life Technologies Corp Analyse von boten-rna und mikro-rna im gleichen reaktionsansatz
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US20070068573A1 (en) * 2005-08-22 2007-03-29 Applera Corporation Device and method for microfluidic control of a first fluid in contact with a second fluid, wherein the first and second fluids are immiscible
WO2007025281A2 (en) 2005-08-24 2007-03-01 Applera Corporation A method to quantify sirnas, mirnas and polymorphic mirnas
WO2007133703A2 (en) * 2006-05-10 2007-11-22 Dxterity Diagnostics Detection of nucleic acid targets using chemically reactive oligonucleotide probes
US8597938B2 (en) * 2007-10-12 2013-12-03 Qiagen Sciences Llc System for providing control reactions for real time RT-PCR
WO2009100449A1 (en) * 2008-02-08 2009-08-13 Fluidigm Corporation Dynamic array assay methods
WO2010027870A2 (en) * 2008-08-26 2010-03-11 Fluidigm Corporation Assay methods for increased throughput of samples and/or targets
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JP5608998B2 (ja) * 2009-03-31 2014-10-22 東洋紡株式会社 保存安定性に優れた核酸増幅検出試薬キット
WO2010114599A1 (en) * 2009-04-01 2010-10-07 Dx Terity Diagnostics Inc. Chemical ligation dependent probe amplification (clpa)
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WO2011056866A2 (en) 2009-11-05 2011-05-12 Epicentre Technologies Corporation Methods and kits for 3'-end-tagging of rna
WO2011071923A2 (en) * 2009-12-07 2011-06-16 Illumina, Inc. Multi-sample indexing for multiplex genotyping
EP2534263B1 (de) * 2010-02-09 2020-08-05 Unitaq Bio Verfahren und zusammensetzungen zur universellen erkennung von nukleinsäuren
US10066257B2 (en) 2010-03-29 2018-09-04 Dxterity Diagnostics Incorporated Methods and compositions for detecting target nucleic acids
AU2011305445B2 (en) 2010-09-24 2017-03-16 The Board Of Trustees Of The Leland Stanford Junior University Direct capture, amplification and sequencing of target DNA using immobilized primers
US9353406B2 (en) * 2010-10-22 2016-05-31 Fluidigm Corporation Universal probe assay methods
US20120288857A1 (en) * 2011-02-03 2012-11-15 Fluidigm Corporation Multifunctional probe-primers
US20140170653A1 (en) 2011-04-15 2014-06-19 Life Technologies Corporation Chemical ligation
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SG10201605049QA (en) 2011-05-20 2016-07-28 Fluidigm Corp Nucleic acid encoding reactions
EP2764100A4 (de) * 2011-10-03 2015-09-16 Univ Florida Schnelle und zuverlässige detektion von infektionserregern
EP3718573B1 (de) 2011-12-30 2026-05-20 University of Washington through its Center for Commercialization Chromophore polymerpunkte mit schmalbandiger emission
US10648030B2 (en) 2012-01-13 2020-05-12 Affymetrix, Inc. Methods of determining the presence or absence of a plurality of target polynucleotides in a sample
EP4361606A3 (de) * 2012-02-03 2024-07-10 California Institute of Technology Signalkodierung und -dekodierung in multiplexierten biochemischen assays
CN104204228A (zh) 2012-02-14 2014-12-10 康奈尔大学 使用组合的核酸酶、连接和聚合酶反应用于核酸序列的相对定量、表达或拷贝变化的方法
CN104471077B (zh) 2012-05-21 2017-05-24 富鲁达公司 颗粒群的单颗粒分析
CN108753932B (zh) 2012-08-03 2022-12-02 加州理工学院 Pcr中具有减少的硬件和要求的多重化和定量
EP2971172B1 (de) 2013-03-14 2019-07-24 Cornell University Verfahren zur relativen quantifizierung von veränderungen in einer dna-methylierung mit kombinierten nuklease-, ligations- und polymerasereaktionen
US10221447B2 (en) 2014-04-01 2019-03-05 Cornell University Detection of DNA methylation using combined nuclease ligation reactions
WO2015191777A2 (en) 2014-06-10 2015-12-17 Dxterity Diagnostics Incorporated Devices and methods for collecting and stabilizing biological samples
EP4026914A1 (de) 2014-10-08 2022-07-13 Cornell University Verfahren zur identifizierung und relativen quantifizierung von nukleinsäuremethylierungsänderungen unter verwendung von kombinierter nuklease, ligation und polymerasereaktionen mit verschleppungsverhinderung
US11118216B2 (en) 2015-09-08 2021-09-14 Affymetrix, Inc. Nucleic acid analysis by joining barcoded polynucleotide probes
CA3006994A1 (en) 2015-12-16 2017-06-22 Fluidigm Corporation High-level multiplex amplification
EP3347497A4 (de) * 2016-01-31 2019-01-23 Affymetrix, Inc. Nukleinsäureanalyse durch verbinden von barcodierten polynukleotidsonden
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EP3781710A4 (de) 2018-04-17 2022-01-05 Chromacode, Inc. Verfahren und systeme zur multiplex-analyse
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US20040110134A1 (en) * 2002-12-05 2004-06-10 Wenz H. Michael Methods for quantitating nucleic acids using coupled ligation and amplification
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Also Published As

Publication number Publication date
JP2007530051A (ja) 2007-11-01
US7601821B2 (en) 2009-10-13
DE602005014453D1 (de) 2009-06-25
EP1730312A2 (de) 2006-12-13
WO2005098040A8 (en) 2005-12-01
US20050272071A1 (en) 2005-12-08
EP2161346A1 (de) 2010-03-10
EP1727913A2 (de) 2006-12-06
JP2007530048A (ja) 2007-11-01
ATE399884T1 (de) 2008-07-15
DE602005007874D1 (de) 2008-08-14
WO2005098040A3 (en) 2006-03-23
EP1727913B8 (de) 2009-08-19
EP1727913B1 (de) 2009-05-13
EP2161346B1 (de) 2013-06-19
WO2005094532A3 (en) 2005-12-22
WO2005094532A2 (en) 2005-10-13
WO2005098040A2 (en) 2005-10-20
EP1730312B1 (de) 2008-07-02
US7604937B2 (en) 2009-10-20
US20050260640A1 (en) 2005-11-24

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