ATE431433T1 - Ligation und amplifikationsreaktionen zur bestimmung von zielmolekülen - Google Patents

Ligation und amplifikationsreaktionen zur bestimmung von zielmolekülen

Info

Publication number
ATE431433T1
ATE431433T1 AT05760637T AT05760637T ATE431433T1 AT E431433 T1 ATE431433 T1 AT E431433T1 AT 05760637 T AT05760637 T AT 05760637T AT 05760637 T AT05760637 T AT 05760637T AT E431433 T1 ATE431433 T1 AT E431433T1
Authority
AT
Austria
Prior art keywords
present
encoding
reaction
ligation
sample
Prior art date
Application number
AT05760637T
Other languages
English (en)
Inventor
Mark R Andersen
Kenneth J Livak
Adam Broomer
Caifu Chen
Original Assignee
Applied Biosystems Llc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Applied Biosystems Llc filed Critical Applied Biosystems Llc
Application granted granted Critical
Publication of ATE431433T1 publication Critical patent/ATE431433T1/de

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Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844—Nucleic acid amplification reactions
    • C12Q1/6851—Quantitative amplification

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Biochemistry (AREA)
  • Biotechnology (AREA)
  • Molecular Biology (AREA)
  • Biophysics (AREA)
  • Analytical Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Immunology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
AT05760637T 2004-03-24 2005-03-24 Ligation und amplifikationsreaktionen zur bestimmung von zielmolekülen ATE431433T1 (de)

Applications Claiming Priority (6)

Application Number Priority Date Filing Date Title
US55616304P 2004-03-24 2004-03-24
US55616204P 2004-03-24 2004-03-24
US55622404P 2004-03-24 2004-03-24
US55615704P 2004-03-24 2004-03-24
US63068104P 2004-11-24 2004-11-24
PCT/US2005/010184 WO2005098040A2 (en) 2004-03-24 2005-03-24 Ligation and amplification reactions for determining target molecules

Publications (1)

Publication Number Publication Date
ATE431433T1 true ATE431433T1 (de) 2009-05-15

Family

ID=35064420

Family Applications (2)

Application Number Title Priority Date Filing Date
AT05732398T ATE399884T1 (de) 2004-03-24 2005-03-24 Codierungs- und decodierungsreaktionen zur bestimmung von target-polynukleotiden
AT05760637T ATE431433T1 (de) 2004-03-24 2005-03-24 Ligation und amplifikationsreaktionen zur bestimmung von zielmolekülen

Family Applications Before (1)

Application Number Title Priority Date Filing Date
AT05732398T ATE399884T1 (de) 2004-03-24 2005-03-24 Codierungs- und decodierungsreaktionen zur bestimmung von target-polynukleotiden

Country Status (6)

Country Link
US (2) US7604937B2 (de)
EP (3) EP1727913B8 (de)
JP (2) JP2007530051A (de)
AT (2) ATE399884T1 (de)
DE (2) DE602005014453D1 (de)
WO (2) WO2005098040A2 (de)

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US20070026439A1 (en) * 2005-07-15 2007-02-01 Applera Corporation Fluid processing device and method
ATE489473T1 (de) 2005-07-15 2010-12-15 Life Technologies Corp Analyse von boten-rna und mikro-rna im gleichen reaktionsansatz
US7955864B2 (en) * 2005-08-22 2011-06-07 Life Technologies Corporation Device and method for making discrete volumes of a first fluid in contact with a second fluid, which are immiscible with each other
ATE532878T1 (de) * 2005-08-24 2011-11-15 Life Technologies Corp Verfahren zur quantifizierung von sirnas, mirnas und polymorphen mirnas
EP2677039B8 (de) * 2006-05-10 2022-10-05 DxTerity Diagnostics Incorporated Erkennung von Nukleinsäuretargets mithilfe chemisch reaktiver Oligonnucleotidsonden
US8597938B2 (en) * 2007-10-12 2013-12-03 Qiagen Sciences Llc System for providing control reactions for real time RT-PCR
US9157116B2 (en) * 2008-02-08 2015-10-13 Fluidigm Corporation Combinatorial amplification and detection of nucleic acids
EP2326732A4 (de) * 2008-08-26 2012-11-14 Fluidigm Corp Testverfahren für erhöhten durchsatz von proben und/oder targets
US8583380B2 (en) 2008-09-05 2013-11-12 Aueon, Inc. Methods for stratifying and annotating cancer drug treatment options
JP5608998B2 (ja) * 2009-03-31 2014-10-22 東洋紡株式会社 保存安定性に優れた核酸増幅検出試薬キット
DK2414544T3 (da) * 2009-04-01 2014-06-16 Dxterity Diagnostics Inc Probe-amplifikations-afhængig kemisk ligering
DK2414547T3 (da) 2009-04-02 2014-06-16 Fluidigm Corp Multiprimer-amplifikationsmetode til stregkodning af målnukleinsyrer
US8574864B2 (en) * 2009-11-05 2013-11-05 Epicentre Technologies Corporation Methods and kits for 3'-end-tagging of RNA
CN102648295B (zh) * 2009-12-07 2017-08-08 伊鲁米那股份有限公司 用于多重基因分型的多样品索引
US8940487B2 (en) * 2010-02-09 2015-01-27 UmiTaq Bio Methods and compositions for universal detection of nucleic acids
RU2565550C2 (ru) 2010-09-24 2015-10-20 Те Борд Оф Трастиз Оф Те Лилэнд Стэнфорд Джуниор Юниверсити Прямой захват, амплификация и секвенирование днк-мишени с использованием иммобилизированных праймеров
WO2012054933A2 (en) * 2010-10-22 2012-04-26 Fluidigm Corporation Universal probe assay methods
WO2012106668A2 (en) * 2011-02-03 2012-08-09 Fluidigm Corporation Multifunctional probe-primers
WO2012142003A2 (en) 2011-04-15 2012-10-18 Life Technologies Corporation Chemical ligation
SG194722A1 (en) 2011-05-09 2013-12-30 Fluidigm Corp Probe based nucleic acid detection
CN106434871B (zh) 2011-05-17 2020-08-18 德克斯特里蒂诊断公司 用于检测目标核酸的方法与组合物
US9074204B2 (en) 2011-05-20 2015-07-07 Fluidigm Corporation Nucleic acid encoding reactions
WO2013052124A2 (en) * 2011-10-03 2013-04-11 University Of Florida Research Foundation, Inc. Rapid and reliable detection of infectious agents
EP3718573B1 (de) * 2011-12-30 2026-05-20 Univ Washington Through Its Center For Commercialization Chromophore polymerpunkte mit schmalbandiger emission
US10648030B2 (en) 2012-01-13 2020-05-12 Affymetrix, Inc. Methods of determining the presence or absence of a plurality of target polynucleotides in a sample
CN107326085B (zh) * 2012-02-03 2022-05-03 加州理工学院 多路生化测定中信号的编码和解码
JP2015508655A (ja) 2012-02-14 2015-03-23 コーネル ユニバーシティー 組み合わせたヌクレアーゼ反応、連結反応、およびポリメラーゼ反応を用いて核酸配列、発現、またはコピー変化を相対的に定量するための方法
US9840732B2 (en) 2012-05-21 2017-12-12 Fluidigm Corporation Single-particle analysis of particle populations
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WO2014160199A1 (en) 2013-03-14 2014-10-02 Cornell University Method for relative quantification of changes in dna methylation, using combined nuclease, ligation, and polymerase reactions
WO2015153571A2 (en) 2014-04-01 2015-10-08 Cornell University Detection of dna methylation using combined nuclease ligation reactions
EP3154696B1 (de) 2014-06-10 2020-04-08 DxTerity Diagnostics Incorporated Vorrichtungen und verfahren zur entnahme und stabilisierung biologischer proben
EP3690060B1 (de) 2014-10-08 2021-12-08 Cornell University Verfahren zur identifizierung und relativen quantifizierung von nukleinsäuresequenzexpression, spleissvariante, translokation, kopieranzahl oder methylierungsänderungen unter verwendung von kombinierter nuklease, ligation und polymerasereaktionen mit verschleppungsverhinderung
US11118216B2 (en) 2015-09-08 2021-09-14 Affymetrix, Inc. Nucleic acid analysis by joining barcoded polynucleotide probes
WO2017044993A2 (en) * 2015-09-08 2017-03-16 Affymetrix, Inc. Nucleic acid analysis by joining barcoded polynucleotide probes
CN108603224B (zh) 2015-12-16 2022-06-28 富鲁达公司 高水平多路复用扩增
US10066263B2 (en) 2016-06-17 2018-09-04 California Institute Of Technology Nucleic acid reactions and related methods and compositions
CN112424377A (zh) 2018-04-17 2021-02-26 克罗玛科德公司 用于多重分析的方法和系统
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CA3180322A1 (en) * 2020-05-01 2021-11-04 Nikhil Dhar Compositions and methods for rna synthesis

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Also Published As

Publication number Publication date
DE602005007874D1 (de) 2008-08-14
US7601821B2 (en) 2009-10-13
EP1727913B1 (de) 2009-05-13
EP1730312A2 (de) 2006-12-13
WO2005094532A2 (en) 2005-10-13
WO2005098040A2 (en) 2005-10-20
US20050272071A1 (en) 2005-12-08
WO2005098040A8 (en) 2005-12-01
EP2161346A1 (de) 2010-03-10
JP2007530051A (ja) 2007-11-01
US20050260640A1 (en) 2005-11-24
JP2007530048A (ja) 2007-11-01
EP1727913B8 (de) 2009-08-19
EP1730312B1 (de) 2008-07-02
DE602005014453D1 (de) 2009-06-25
EP1727913A2 (de) 2006-12-06
WO2005094532A3 (en) 2005-12-22
WO2005098040A3 (en) 2006-03-23
US7604937B2 (en) 2009-10-20
EP2161346B1 (de) 2013-06-19
ATE399884T1 (de) 2008-07-15

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