DK4172357T3 - Fremgangsmåder og sammensætninger til analyse af nucleinsyrer - Google Patents

Fremgangsmåder og sammensætninger til analyse af nucleinsyrer Download PDF

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Publication number
DK4172357T3
DK4172357T3 DK21742627.9T DK21742627T DK4172357T3 DK 4172357 T3 DK4172357 T3 DK 4172357T3 DK 21742627 T DK21742627 T DK 21742627T DK 4172357 T3 DK4172357 T3 DK 4172357T3
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Denmark
Prior art keywords
compositions
analysis
methods
nucleic acids
nucleic
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DK21742627.9T
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English (en)
Inventor
Christopher J Troll
Varsha Rao
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Claret Bioscience Llc
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    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/1034—Isolating an individual clone by screening libraries
    • C12N15/1093—General methods of preparing gene libraries, not provided for in other subgroups
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6806—Preparing nucleic acids for analysis, e.g. for polymerase chain reaction [PCR] assay
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813—Hybridisation assays
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N2330/00—Production
    • C12N2330/30—Production chemically synthesised
    • C12N2330/31—Libraries, arrays
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/16—Primer sets for multiplex assays

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  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Genetics & Genomics (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Biotechnology (AREA)
  • General Engineering & Computer Science (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Analytical Chemistry (AREA)
  • Biophysics (AREA)
  • Molecular Biology (AREA)
  • Biochemistry (AREA)
  • Microbiology (AREA)
  • General Health & Medical Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Immunology (AREA)
  • Biomedical Technology (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Crystallography & Structural Chemistry (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Plant Pathology (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
DK21742627.9T 2020-06-24 2021-06-23 Fremgangsmåder og sammensætninger til analyse af nucleinsyrer DK4172357T3 (da)

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
US202063043688P 2020-06-24 2020-06-24
US202063086208P 2020-10-01 2020-10-01
US202163159174P 2021-03-10 2021-03-10
US202163195352P 2021-06-01 2021-06-01
PCT/US2021/038609 WO2021262805A1 (en) 2020-06-24 2021-06-23 Methods and compositions for analyzing nucleic acid

Publications (1)

Publication Number Publication Date
DK4172357T3 true DK4172357T3 (da) 2024-08-05

Family

ID=76943150

Family Applications (2)

Application Number Title Priority Date Filing Date
DK21742627.9T DK4172357T3 (da) 2020-06-24 2021-06-23 Fremgangsmåder og sammensætninger til analyse af nucleinsyrer
DK24175490.2T DK4428244T3 (da) 2020-06-24 2021-06-23 Fremgangsmåder og sammensætninger til analyse af nukleinsyre

Family Applications After (1)

Application Number Title Priority Date Filing Date
DK24175490.2T DK4428244T3 (da) 2020-06-24 2021-06-23 Fremgangsmåder og sammensætninger til analyse af nukleinsyre

Country Status (8)

Country Link
US (1) US20230235320A1 (da)
EP (2) EP4428244B1 (da)
JP (2) JP7802707B2 (da)
CN (1) CN116096914A (da)
AU (1) AU2021297880A1 (da)
CA (1) CA3186974A1 (da)
DK (2) DK4172357T3 (da)
WO (1) WO2021262805A1 (da)

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WO2019236726A1 (en) 2018-06-06 2019-12-12 The Regents Of The University Of California Methods of producing nucleic acid libraries and compositions and kits for practicing same
EP4055160B1 (en) 2019-11-08 2024-04-10 Becton Dickinson and Company Using random priming to obtain full-length v(d)j information for immune repertoire sequencing
CN115279919A (zh) 2020-01-13 2022-11-01 贝克顿迪金森公司 使用含有du的寡核苷酸的细胞捕获
EP4612324A1 (en) * 2022-11-02 2025-09-10 Becton, Dickinson and Company Application for peptide nucleic acid (pna) blocker
CN120344674B (zh) * 2022-12-16 2026-07-10 基金会医学公司 用于保存细胞游离dna的拓扑信息的文库制备和分析方法
EP4731784A2 (en) * 2023-06-23 2026-04-29 Seqonce Biosciences, Inc. Nick initiated cycling emission and replacement reaction
WO2025106807A1 (en) * 2023-11-16 2025-05-22 The Board Of Trustees Of The Leland Stanford Junior University Classification of samples using methylation enrichment
CN120877879B (zh) * 2025-07-21 2026-06-16 浙江大学 一种基于纳米孔测序的糖基化rna修饰鉴定模型构建方法和系统

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* Cited by examiner, † Cited by third party
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US6927028B2 (en) 2001-08-31 2005-08-09 Chinese University Of Hong Kong Non-invasive methods for detecting non-host DNA in a host using epigenetic differences between the host and non-host DNA
EP1817430B1 (en) 2004-11-29 2009-09-16 Klinikum der Universität Regensburg Means and methods for detecting methylated dna
EP3260556B1 (en) 2006-05-31 2019-07-31 Sequenom, Inc. Methods for the extraction of nucleic acid from a sample
EP2038426A2 (en) 2006-06-16 2009-03-25 Sequenom, Inc. Methods and compositions for the amplification, detection and quantification of nucleic acid from a sample
WO2009032781A2 (en) 2007-08-29 2009-03-12 Sequenom, Inc. Methods and compositions for universal size-specific polymerase chain reaction
WO2009032779A2 (en) 2007-08-29 2009-03-12 Sequenom, Inc. Methods and compositions for the size-specific seperation of nucleic acid from a sample
WO2009120808A2 (en) 2008-03-26 2009-10-01 Sequenom, Inc. Restriction endonuclease enhanced polymorphic sequence detection
EP3103871B1 (en) 2008-09-16 2020-07-29 Sequenom, Inc. Processes for methylation-based enrichment of fetal nucleic acid from a maternal sample useful for fetal nucleic acid quantification
US8476013B2 (en) 2008-09-16 2013-07-02 Sequenom, Inc. Processes and compositions for methylation-based acid enrichment of fetal nucleic acid from a maternal sample useful for non-invasive prenatal diagnoses
US8771948B2 (en) 2009-04-03 2014-07-08 Sequenom, Inc. Nucleic acid preparation compositions and methods
SG185544A1 (en) 2010-05-14 2012-12-28 Fluidigm Corp Nucleic acid isolation methods
WO2013019361A1 (en) 2011-07-07 2013-02-07 Life Technologies Corporation Sequencing methods
US10590483B2 (en) * 2014-09-15 2020-03-17 Abvitro Llc High-throughput nucleotide library sequencing
WO2017210469A2 (en) * 2016-06-01 2017-12-07 F. Hoffman-La Roche Ag Immuno-pete
JP6982087B2 (ja) * 2017-01-27 2021-12-17 インテグレイテッド ディエヌエイ テクノロジイズ, インコーポレイテッドIntegrated Dna Technologies, Incorporated 競合的鎖置換を利用する次世代シーケンシング(ngs)ライブラリーの構築
CN108060191B (zh) * 2017-11-07 2021-05-04 深圳华大智造科技股份有限公司 一种双链核酸片段加接头的方法、文库构建方法和试剂盒
US11584929B2 (en) * 2018-01-12 2023-02-21 Claret Bioscience, Llc Methods and compositions for analyzing nucleic acid
WO2020206143A1 (en) * 2019-04-05 2020-10-08 Claret Bioscience, Llc Methods and compositions for analyzing nucleic acid
AU2020345621A1 (en) * 2019-09-09 2022-04-07 University Of Utah Research Foundation Targeted sequencing to detect and quantify low levels of methylated DNA

Also Published As

Publication number Publication date
EP4172357B1 (en) 2024-05-15
EP4428244B1 (en) 2025-10-15
AU2021297880A1 (en) 2023-01-19
CN116096914A (zh) 2023-05-09
EP4428244A3 (en) 2024-10-02
WO2021262805A1 (en) 2021-12-30
CA3186974A1 (en) 2021-12-30
DK4428244T3 (da) 2026-01-12
EP4172357A1 (en) 2023-05-03
JP2023531720A (ja) 2023-07-25
US20230235320A1 (en) 2023-07-27
JP2025183345A (ja) 2025-12-16
JP7802707B2 (ja) 2026-01-20
EP4428244A2 (en) 2024-09-11

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