ATE465274T1 - Verbesserte strategien zur sequenzierung komplexer genome unter verwendung von sequenziertechniken mit hohem durchsatz - Google Patents
Verbesserte strategien zur sequenzierung komplexer genome unter verwendung von sequenziertechniken mit hohem durchsatzInfo
- Publication number
- ATE465274T1 ATE465274T1 AT06757809T AT06757809T ATE465274T1 AT E465274 T1 ATE465274 T1 AT E465274T1 AT 06757809 T AT06757809 T AT 06757809T AT 06757809 T AT06757809 T AT 06757809T AT E465274 T1 ATE465274 T1 AT E465274T1
- Authority
- AT
- Austria
- Prior art keywords
- sequence
- fragments
- primer
- sequencing
- genome
- Prior art date
Links
- 238000000034 method Methods 0.000 title abstract 2
- 238000012163 sequencing technique Methods 0.000 title abstract 2
- 238000012165 high-throughput sequencing Methods 0.000 title 1
- 239000012634 fragment Substances 0.000 abstract 5
- 108091008146 restriction endonucleases Proteins 0.000 abstract 3
- 239000002773 nucleotide Substances 0.000 abstract 2
- 125000003729 nucleotide group Chemical group 0.000 abstract 2
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6813—Hybridisation assays
- C12Q1/6827—Hybridisation assays for detection of mutation or polymorphism
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6869—Methods for sequencing
Landscapes
- Chemical & Material Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Organic Chemistry (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Health & Medical Sciences (AREA)
- Wood Science & Technology (AREA)
- Zoology (AREA)
- Engineering & Computer Science (AREA)
- Biochemistry (AREA)
- General Engineering & Computer Science (AREA)
- Microbiology (AREA)
- Molecular Biology (AREA)
- Physics & Mathematics (AREA)
- Biotechnology (AREA)
- Analytical Chemistry (AREA)
- Biophysics (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Immunology (AREA)
- General Health & Medical Sciences (AREA)
- Genetics & Genomics (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Heterocyclic Carbon Compounds Containing A Hetero Ring Having Oxygen Or Sulfur (AREA)
- Saccharide Compounds (AREA)
- Investigating Or Analysing Biological Materials (AREA)
- Medicines Containing Plant Substances (AREA)
Applications Claiming Priority (5)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US69305305P | 2005-06-23 | 2005-06-23 | |
| US71489705P | 2005-09-08 | 2005-09-08 | |
| EP06075104 | 2006-01-16 | ||
| US75903406P | 2006-01-17 | 2006-01-17 | |
| PCT/NL2006/000312 WO2006137734A1 (en) | 2005-06-23 | 2006-06-23 | Improved strategies for sequencing complex genomes using high throughput sequencing technologies |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| ATE465274T1 true ATE465274T1 (de) | 2010-05-15 |
Family
ID=36950154
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| AT06757809T ATE465274T1 (de) | 2005-06-23 | 2006-06-23 | Verbesserte strategien zur sequenzierung komplexer genome unter verwendung von sequenziertechniken mit hohem durchsatz |
Country Status (11)
| Country | Link |
|---|---|
| US (1) | US20090142758A1 (de) |
| EP (1) | EP1910563B1 (de) |
| JP (1) | JP2008546405A (de) |
| CN (1) | CN101278058A (de) |
| AT (1) | ATE465274T1 (de) |
| AU (1) | AU2006259990B2 (de) |
| CA (1) | CA2613248A1 (de) |
| DE (1) | DE602006013831D1 (de) |
| DK (1) | DK1910562T3 (de) |
| ES (2) | ES2344802T3 (de) |
| WO (1) | WO2006137734A1 (de) |
Families Citing this family (33)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| DK2302070T3 (da) | 2005-06-23 | 2012-11-26 | Keygene Nv | Strategier til identifikation og detektion af polymorfismer med højt gennemløb |
| US10316364B2 (en) | 2005-09-29 | 2019-06-11 | Keygene N.V. | Method for identifying the source of an amplicon |
| WO2007037678A2 (en) | 2005-09-29 | 2007-04-05 | Keygene N.V. | High throughput screening of mutagenized populations |
| CN103937899B (zh) | 2005-12-22 | 2017-09-08 | 凯津公司 | 用于基于aflp的高通量多态性检测的方法 |
| CN101365803B (zh) * | 2005-12-22 | 2013-03-20 | 关键基因股份有限公司 | 采用高通量测序技术的改进的转录谱描述策略 |
| US7932029B1 (en) * | 2006-01-04 | 2011-04-26 | Si Lok | Methods for nucleic acid mapping and identification of fine-structural-variations in nucleic acids and utilities |
| EP3239304B1 (de) | 2006-04-04 | 2020-08-19 | Keygene N.V. | Nachweis von molekularmarkern mit hohem durchsatz auf der basis von aflp und mit hoher durchsatzsequenzierung |
| CN103333949B (zh) | 2006-07-12 | 2015-05-06 | 凯津公司 | 使用aflp的高通量物理作图 |
| WO2008093098A2 (en) | 2007-02-02 | 2008-08-07 | Illumina Cambridge Limited | Methods for indexing samples and sequencing multiple nucleotide templates |
| AR066922A1 (es) | 2007-06-08 | 2009-09-23 | Monsanto Technology Llc | Metodos de mejoramiento molecular del germoplasma de una planta por secuenciamiento dirigido |
| US9080211B2 (en) | 2008-10-24 | 2015-07-14 | Epicentre Technologies Corporation | Transposon end compositions and methods for modifying nucleic acids |
| WO2010082815A1 (en) | 2009-01-13 | 2010-07-22 | Keygene N.V. | Novel genome sequencing strategies |
| EP2248914A1 (de) * | 2009-05-05 | 2010-11-10 | Max-Planck-Gesellschaft zur Förderung der Wissenschaften e.V. | Die Verwendung von IIB-Restriktionsendonukleasen in Sequenzierungsanwendungen der zweiten Generation |
| CN101693918B (zh) * | 2009-10-13 | 2012-01-04 | 东南大学 | 一种提高核酸内切酶v切割位置特异性的方法 |
| WO2011071382A1 (en) * | 2009-12-10 | 2011-06-16 | Keygene N.V. | Polymorfphic whole genome profiling |
| EP2333104A1 (de) | 2009-12-11 | 2011-06-15 | Lexogen GmbH | RNA-Analyseverfahren |
| EP2354243A1 (de) | 2010-02-03 | 2011-08-10 | Lexogen GmbH | Verfahren zur Komplexitätsminderung |
| WO2012005595A2 (en) * | 2010-07-09 | 2012-01-12 | Wouter Leonard De Laat | V3-d genomic region of interest sequencing strategies |
| AU2012304328B2 (en) | 2011-09-09 | 2017-07-20 | The Board Of Trustees Of The Leland Stanford Junior University | Methods for obtaining a sequence |
| LT2756098T (lt) | 2011-09-16 | 2018-09-10 | Lexogen Gmbh | Nukleorūgščių molekulių bibliotekos sudarymo būdas |
| CN102373288B (zh) * | 2011-11-30 | 2013-12-11 | 盛司潼 | 一种对目标区域进行测序的方法及试剂盒 |
| CN103305503B (zh) * | 2012-03-16 | 2016-05-11 | 江苏基谱生物科技发展有限公司 | 一种用于高通量测序的索引序列组 |
| EP2959011A1 (de) * | 2013-02-19 | 2015-12-30 | Cergentis B.V. | Sequenzierungsstrategien für relevante genombereiche |
| US9328382B2 (en) | 2013-03-15 | 2016-05-03 | Complete Genomics, Inc. | Multiple tagging of individual long DNA fragments |
| CN104630202A (zh) * | 2013-11-13 | 2015-05-20 | 北京大学 | 一种能够减小微量核酸物质整体扩增时产生偏倚的扩增方法 |
| GB201409282D0 (en) * | 2014-05-23 | 2014-07-09 | Univ Sydney Tech | Sequencing process |
| EP3208343B1 (de) * | 2014-10-13 | 2022-01-05 | MGI Tech Co., Ltd. | Nukleinsäurefragmentierungsverfahren und sequenzkombination |
| CN107590362B (zh) * | 2017-08-21 | 2019-12-06 | 武汉菲沙基因信息有限公司 | 一种基于长读序测序判断重叠组装正误的方法 |
| EP4245861B1 (de) | 2018-05-08 | 2025-02-26 | MGI Tech Co., Ltd. | Einzelrohrbead-basierte dna co-barcodierung zur genauen und kostengünstigen sequenzierung, haplotypisierung und anordnung |
| CN110157781B (zh) * | 2018-12-29 | 2020-08-21 | 广州凯普医药科技有限公司 | 一种重叠延伸PCR结合Sanger测序检测不连续多DNA位点的方法 |
| EP3918088B1 (de) * | 2019-01-29 | 2024-03-13 | MGI Tech Co., Ltd. | Stlfr mit hoher abdeckung |
| EP3973073A1 (de) * | 2019-05-20 | 2022-03-30 | Arima Genomics, Inc. | Verfahren und zusammensetzungen zur verbesserten genomabdeckung und erhaltung von räumlicher proximaler nähe |
| CN111667883B (zh) * | 2020-06-03 | 2021-01-22 | 四川大学 | 一种基于复合微单倍型焦磷酸测序图谱解析的法医学混合dna的分析方法 |
Family Cites Families (10)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| AU672760B2 (en) * | 1991-09-24 | 1996-10-17 | Keygene N.V. | Selective restriction fragment amplification: a general method for DNA fingerprinting |
| AU6024598A (en) * | 1997-01-10 | 1998-08-03 | Pioneer Hi-Bred International, Inc. | Hybridization-based genetic amplification and analysis |
| JP2001515362A (ja) * | 1997-05-13 | 2001-09-18 | ディスプレイ・システムズ・バイオテック・アクティーゼルスカブ | ｍＲＮＡをクローニングする方法および差次的に発現された転写物のディスプレイ（ＤＯＤＥＴ） |
| AU5585599A (en) * | 1998-08-31 | 2000-03-21 | University Of Washington | Stable isotope metabolic labeling for analysis of biopolymers |
| CA2345441A1 (en) * | 1998-10-27 | 2000-05-04 | Affymetrix, Inc. | Complexity management and analysis of genomic dna |
| US6534293B1 (en) * | 1999-01-06 | 2003-03-18 | Cornell Research Foundation, Inc. | Accelerating identification of single nucleotide polymorphisms and alignment of clones in genomic sequencing |
| EP1173612B1 (de) * | 1999-04-09 | 2004-09-29 | Keygene N.V. | Verfahren zur erkennung und/oder analyse, unter verwendung von primertechniken, von einfachen nukleotidpolymorphismen in restriktionsfragmenten speziell aus amplifizierten restriktionsfragmenten generiert durch aflp |
| EP1282729A2 (de) * | 2000-05-15 | 2003-02-12 | Keygene N.V. | Mikrosatelliten-aflp |
| US20050064406A1 (en) * | 2001-04-20 | 2005-03-24 | Eugene Zabarovsky | Methods for high throughput genome analysis using restriction site tagged microarrays |
| CA2513899C (en) * | 2003-01-29 | 2013-03-26 | 454 Corporation | Methods of amplifying and sequencing nucleic acids |
-
2006
- 2006-06-23 DE DE602006013831T patent/DE602006013831D1/de active Active
- 2006-06-23 ES ES06757809T patent/ES2344802T3/es active Active
- 2006-06-23 US US11/993,961 patent/US20090142758A1/en not_active Abandoned
- 2006-06-23 JP JP2008518057A patent/JP2008546405A/ja active Pending
- 2006-06-23 AT AT06757809T patent/ATE465274T1/de not_active IP Right Cessation
- 2006-06-23 CA CA002613248A patent/CA2613248A1/en not_active Abandoned
- 2006-06-23 ES ES06757808T patent/ES2357549T3/es active Active
- 2006-06-23 EP EP06757809A patent/EP1910563B1/de not_active Not-in-force
- 2006-06-23 AU AU2006259990A patent/AU2006259990B2/en not_active Ceased
- 2006-06-23 DK DK06757808.8T patent/DK1910562T3/da active
- 2006-06-23 CN CNA2006800306078A patent/CN101278058A/zh active Pending
- 2006-06-23 WO PCT/NL2006/000312 patent/WO2006137734A1/en not_active Ceased
Also Published As
| Publication number | Publication date |
|---|---|
| AU2006259990A1 (en) | 2006-12-28 |
| DK1910562T3 (da) | 2011-03-21 |
| EP1910563B1 (de) | 2010-04-21 |
| DE602006013831D1 (de) | 2010-06-02 |
| US20090142758A1 (en) | 2009-06-04 |
| EP1910563A1 (de) | 2008-04-16 |
| JP2008546405A (ja) | 2008-12-25 |
| ES2357549T3 (es) | 2011-04-27 |
| AU2006259990B2 (en) | 2011-01-27 |
| CA2613248A1 (en) | 2006-12-28 |
| CN101278058A (zh) | 2008-10-01 |
| ES2344802T3 (es) | 2010-09-07 |
| WO2006137734A1 (en) | 2006-12-28 |
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Legal Events
| Date | Code | Title | Description |
|---|---|---|---|
| RER | Ceased as to paragraph 5 lit. 3 law introducing patent treaties |