ATE465274T1 - Verbesserte strategien zur sequenzierung komplexer genome unter verwendung von sequenziertechniken mit hohem durchsatz - Google Patents

Verbesserte strategien zur sequenzierung komplexer genome unter verwendung von sequenziertechniken mit hohem durchsatz

Info

Publication number
ATE465274T1
ATE465274T1 AT06757809T AT06757809T ATE465274T1 AT E465274 T1 ATE465274 T1 AT E465274T1 AT 06757809 T AT06757809 T AT 06757809T AT 06757809 T AT06757809 T AT 06757809T AT E465274 T1 ATE465274 T1 AT E465274T1
Authority
AT
Austria
Prior art keywords
sequence
fragments
primer
sequencing
genome
Prior art date
Application number
AT06757809T
Other languages
English (en)
Inventor
Eijk Michael Josephus Ther Van
Anker Preben Soerensen
Rene Cornelis Josephus Hogers
Original Assignee
Keygene Nv
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Keygene Nv filed Critical Keygene Nv
Application granted granted Critical
Publication of ATE465274T1 publication Critical patent/ATE465274T1/de

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Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813—Hybridisation assays
    • C12Q1/6827—Hybridisation assays for detection of mutation or polymorphism
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Wood Science & Technology (AREA)
  • Zoology (AREA)
  • Engineering & Computer Science (AREA)
  • Biochemistry (AREA)
  • General Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Molecular Biology (AREA)
  • Physics & Mathematics (AREA)
  • Biotechnology (AREA)
  • Analytical Chemistry (AREA)
  • Biophysics (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Immunology (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
  • Medicines Containing Plant Substances (AREA)
  • Heterocyclic Carbon Compounds Containing A Hetero Ring Having Oxygen Or Sulfur (AREA)
  • Saccharide Compounds (AREA)
AT06757809T 2005-06-23 2006-06-23 Verbesserte strategien zur sequenzierung komplexer genome unter verwendung von sequenziertechniken mit hohem durchsatz ATE465274T1 (de)

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
US69305305P 2005-06-23 2005-06-23
US71489705P 2005-09-08 2005-09-08
EP06075104 2006-01-16
US75903406P 2006-01-17 2006-01-17
PCT/NL2006/000312 WO2006137734A1 (en) 2005-06-23 2006-06-23 Improved strategies for sequencing complex genomes using high throughput sequencing technologies

Publications (1)

Publication Number Publication Date
ATE465274T1 true ATE465274T1 (de) 2010-05-15

Family

ID=36950154

Family Applications (1)

Application Number Title Priority Date Filing Date
AT06757809T ATE465274T1 (de) 2005-06-23 2006-06-23 Verbesserte strategien zur sequenzierung komplexer genome unter verwendung von sequenziertechniken mit hohem durchsatz

Country Status (11)

Country Link
US (1) US20090142758A1 (de)
EP (1) EP1910563B1 (de)
JP (1) JP2008546405A (de)
CN (1) CN101278058A (de)
AT (1) ATE465274T1 (de)
AU (1) AU2006259990B2 (de)
CA (1) CA2613248A1 (de)
DE (1) DE602006013831D1 (de)
DK (1) DK1910562T3 (de)
ES (2) ES2344802T3 (de)
WO (1) WO2006137734A1 (de)

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US8785353B2 (en) 2005-06-23 2014-07-22 Keygene N.V. Strategies for high throughput identification and detection of polymorphisms
US10316364B2 (en) 2005-09-29 2019-06-11 Keygene N.V. Method for identifying the source of an amplicon
CA2910861C (en) 2005-09-29 2018-08-07 Michael Josephus Theresia Van Eijk High throughput screening of mutagenized populations
ES2882401T3 (es) * 2005-12-22 2021-12-01 Keygene Nv Método de detección de polimorfismos basado en AFLP de alto rendimiento
US20090247415A1 (en) * 2005-12-22 2009-10-01 Keygene N.V. Strategies for trranscript profiling using high throughput sequencing technologies
US7932029B1 (en) * 2006-01-04 2011-04-26 Si Lok Methods for nucleic acid mapping and identification of fine-structural-variations in nucleic acids and utilities
EP2002017B1 (de) 2006-04-04 2015-06-10 Keygene N.V. Nachweis von molekularmarkern mit hohem durchsatz auf der basis von restriktionsfragmenten
DE602007009233D1 (de) * 2006-07-12 2010-10-28 Keygene Nv Genomische kartierung mit hohem durchsatz unter verwendung von aflp
EP2121983A2 (de) 2007-02-02 2009-11-25 Illumina Cambridge Limited Verfahren zur kennzeichnung von proben und sequenzierung mehrerer nukleotidmatrizen
CL2008001682A1 (es) 2007-06-08 2008-12-12 Monsanto Technology Llc Metodos para el mejoramiento de plantas mediante el uso de informacion directa de secuencias de acidos nucleicos.
US9080211B2 (en) 2008-10-24 2015-07-14 Epicentre Technologies Corporation Transposon end compositions and methods for modifying nucleic acids
JP2012514977A (ja) 2009-01-13 2012-07-05 キージーン・エン・フェー 新規ゲノム配列決定戦略
EP2248914A1 (de) 2009-05-05 2010-11-10 Max-Planck-Gesellschaft zur Förderung der Wissenschaften e.V. Die Verwendung von IIB-Restriktionsendonukleasen in Sequenzierungsanwendungen der zweiten Generation
CN101693918B (zh) * 2009-10-13 2012-01-04 东南大学 一种提高核酸内切酶v切割位置特异性的方法
WO2011071382A1 (en) * 2009-12-10 2011-06-16 Keygene N.V. Polymorfphic whole genome profiling
EP2333104A1 (de) 2009-12-11 2011-06-15 Lexogen GmbH RNA-Analyseverfahren
EP2354243A1 (de) 2010-02-03 2011-08-10 Lexogen GmbH Verfahren zur Komplexitätsminderung
AU2011274642B2 (en) * 2010-07-09 2015-05-21 Cergentis B.V. 3-d genomic region of interest sequencing strategies
HK1199745A1 (en) * 2011-09-09 2015-07-17 The Board Of Trustees Of The Leland Stanford Junior University Methods for obtaining a sequence
WO2013038010A2 (en) 2011-09-16 2013-03-21 Lexogen Gmbh Nucleic acid transcription method
CN102373288B (zh) * 2011-11-30 2013-12-11 盛司潼 一种对目标区域进行测序的方法及试剂盒
CN103305503B (zh) * 2012-03-16 2016-05-11 江苏基谱生物科技发展有限公司 一种用于高通量测序的索引序列组
EP2959011A1 (de) * 2013-02-19 2015-12-30 Cergentis B.V. Sequenzierungsstrategien für relevante genombereiche
US9328382B2 (en) 2013-03-15 2016-05-03 Complete Genomics, Inc. Multiple tagging of individual long DNA fragments
CN104630202A (zh) * 2013-11-13 2015-05-20 北京大学 一种能够减小微量核酸物质整体扩增时产生偏倚的扩增方法
GB201409282D0 (en) * 2014-05-23 2014-07-09 Univ Sydney Tech Sequencing process
CN107075561A (zh) * 2014-10-13 2017-08-18 深圳华大基因科技有限公司 一种核酸片段化方法和序列组合
CN107590362B (zh) * 2017-08-21 2019-12-06 武汉菲沙基因信息有限公司 一种基于长读序测序判断重叠组装正误的方法
ES2947437T3 (es) 2018-05-08 2023-08-09 Mgi Tech Co Ltd Creación de Códigos de barra compartidos en el ADN, en un solo tubo con perlas, para la secuenciación, haplotipado y ensamblaje preciso y rentable
CN110157781B (zh) * 2018-12-29 2020-08-21 广州凯普医药科技有限公司 一种重叠延伸PCR结合Sanger测序检测不连续多DNA位点的方法
EP3918088B1 (de) * 2019-01-29 2024-03-13 MGI Tech Co., Ltd. Stlfr mit hoher abdeckung
CN114008213A (zh) * 2019-05-20 2022-02-01 阿瑞玛基因组学公司 用于增强基因组覆盖和保持空间邻近的邻接性的方法和组合物
CN111667883B (zh) * 2020-06-03 2021-01-22 四川大学 一种基于复合微单倍型焦磷酸测序图谱解析的法医学混合dna的分析方法

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Publication number Priority date Publication date Assignee Title
ZA927323B (en) * 1991-09-24 1993-08-30 Keygene Nv Selective restriction fragment amplification: A general method for DNA fingerprinting
US6100030A (en) * 1997-01-10 2000-08-08 Pioneer Hi-Bred International, Inc. Use of selective DNA fragment amplification products for hybridization-based genetic fingerprinting, marker assisted selection, and high-throughput screening
WO1998051789A2 (en) * 1997-05-13 1998-11-19 Display Systems Biotech A/S A METHOD TO CLONE mRNAs AND DISPLAY OF DIFFERENTIALLY EXPRESSED TRANSCRIPTS (DODET)
CA2341157A1 (en) * 1998-08-31 2000-03-09 University Of Washington Stable isotope metabolic labeling for analysis of biopolymers
DE69929542T2 (de) * 1998-10-27 2006-09-14 Affymetrix, Inc., Santa Clara Komplexitätsmanagement und analyse genomischer dna
CA2356697C (en) * 1999-01-06 2010-06-22 Cornell Research Foundation, Inc. Accelerating identification of single nucleotide polymorphisms and alignment of clones in genomic sequencing
ATE386819T1 (de) * 1999-04-09 2008-03-15 Keygene Nv Verfahren zur analyse von aflp reaktionsmischungen unter verwendung von primer verlängerungstechniken
AU2001258924A1 (en) * 2000-05-15 2001-11-26 Keygene N.V. Microsatellite-aflp
US20050064406A1 (en) * 2001-04-20 2005-03-24 Eugene Zabarovsky Methods for high throughput genome analysis using restriction site tagged microarrays
DE602004026033D1 (de) * 2003-01-29 2010-04-29 454 Corp Zweiendige sequenzierung

Also Published As

Publication number Publication date
EP1910563B1 (de) 2010-04-21
CN101278058A (zh) 2008-10-01
AU2006259990A1 (en) 2006-12-28
US20090142758A1 (en) 2009-06-04
ES2357549T3 (es) 2011-04-27
DK1910562T3 (da) 2011-03-21
WO2006137734A1 (en) 2006-12-28
DE602006013831D1 (de) 2010-06-02
CA2613248A1 (en) 2006-12-28
EP1910563A1 (de) 2008-04-16
JP2008546405A (ja) 2008-12-25
AU2006259990B2 (en) 2011-01-27
ES2344802T3 (es) 2010-09-07

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