JPH09508105A - モノマージオールおよびそれらから形成されるホスフェート結合オリゴマー - Google Patents
モノマージオールおよびそれらから形成されるホスフェート結合オリゴマーInfo
- Publication number
- JPH09508105A JPH09508105A JP7518700A JP51870095A JPH09508105A JP H09508105 A JPH09508105 A JP H09508105A JP 7518700 A JP7518700 A JP 7518700A JP 51870095 A JP51870095 A JP 51870095A JP H09508105 A JPH09508105 A JP H09508105A
- Authority
- JP
- Japan
- Prior art keywords
- group
- carbon atoms
- compound
- alkyl
- mmol
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Granted
Links
- 239000000178 monomer Substances 0.000 title claims abstract description 118
- 150000002009 diols Chemical class 0.000 title description 7
- LYCAIKOWRPUZTN-UHFFFAOYSA-N Ethylene glycol Chemical class OCCO LYCAIKOWRPUZTN-UHFFFAOYSA-N 0.000 claims abstract description 79
- 125000003118 aryl group Chemical group 0.000 claims abstract description 29
- 150000001875 compounds Chemical class 0.000 claims description 201
- 238000000034 method Methods 0.000 claims description 143
- -1 phospho Chemical class 0.000 claims description 142
- RAXXELZNTBOGNW-UHFFFAOYSA-N imidazole Natural products C1=CNC=N1 RAXXELZNTBOGNW-UHFFFAOYSA-N 0.000 claims description 73
- 229910052757 nitrogen Inorganic materials 0.000 claims description 63
- 229910052799 carbon Inorganic materials 0.000 claims description 61
- 125000004432 carbon atom Chemical group C* 0.000 claims description 59
- 125000002887 hydroxy group Chemical group [H]O* 0.000 claims description 57
- 125000000217 alkyl group Chemical group 0.000 claims description 46
- OPTASPLRGRRNAP-UHFFFAOYSA-N cytosine Chemical compound NC=1C=CNC(=O)N=1 OPTASPLRGRRNAP-UHFFFAOYSA-N 0.000 claims description 41
- 239000007787 solid Substances 0.000 claims description 41
- 125000006239 protecting group Chemical group 0.000 claims description 40
- UYTPUPDQBNUYGX-UHFFFAOYSA-N guanine Chemical compound O=C1NC(N)=NC2=C1N=CN2 UYTPUPDQBNUYGX-UHFFFAOYSA-N 0.000 claims description 35
- UJOBWOGCFQCDNV-UHFFFAOYSA-N 9H-carbazole Chemical compound C1=CC=C2C3=CC=CC=C3NC2=C1 UJOBWOGCFQCDNV-UHFFFAOYSA-N 0.000 claims description 34
- 125000002467 phosphate group Chemical group [H]OP(=O)(O[H])O[*] 0.000 claims description 31
- RWQNBRDOKXIBIV-UHFFFAOYSA-N thymine Chemical compound CC1=CNC(=O)NC1=O RWQNBRDOKXIBIV-UHFFFAOYSA-N 0.000 claims description 30
- KDCGOANMDULRCW-UHFFFAOYSA-N 7H-purine Chemical compound N1=CNC2=NC=NC2=C1 KDCGOANMDULRCW-UHFFFAOYSA-N 0.000 claims description 26
- 108091034117 Oligonucleotide Proteins 0.000 claims description 26
- 229910052760 oxygen Inorganic materials 0.000 claims description 26
- 150000008300 phosphoramidites Chemical group 0.000 claims description 26
- 125000002221 trityl group Chemical group [H]C1=C([H])C([H])=C([H])C([H])=C1C([*])(C1=C(C(=C(C(=C1[H])[H])[H])[H])[H])C1=C([H])C([H])=C([H])C([H])=C1[H] 0.000 claims description 26
- 229960000643 adenine Drugs 0.000 claims description 24
- 229940104302 cytosine Drugs 0.000 claims description 22
- 239000002253 acid Chemical group 0.000 claims description 21
- 229940113082 thymine Drugs 0.000 claims description 21
- GFFGJBXGBJISGV-UHFFFAOYSA-N Adenine Chemical compound NC1=NC=NC2=C1N=CN2 GFFGJBXGBJISGV-UHFFFAOYSA-N 0.000 claims description 20
- 229930024421 Adenine Natural products 0.000 claims description 20
- WGCNASOHLSPBMP-UHFFFAOYSA-N hydroxyacetaldehyde Natural products OCC=O WGCNASOHLSPBMP-UHFFFAOYSA-N 0.000 claims description 20
- 229910052736 halogen Inorganic materials 0.000 claims description 19
- 150000002367 halogens Chemical class 0.000 claims description 19
- 239000002202 Polyethylene glycol Substances 0.000 claims description 14
- 125000003710 aryl alkyl group Chemical group 0.000 claims description 14
- 125000001797 benzyl group Chemical group [H]C1=C([H])C([H])=C(C([H])=C1[H])C([H])([H])* 0.000 claims description 14
- 238000004519 manufacturing process Methods 0.000 claims description 14
- 229920001223 polyethylene glycol Polymers 0.000 claims description 14
- 229910052751 metal Inorganic materials 0.000 claims description 13
- 239000002184 metal Substances 0.000 claims description 13
- 229920000570 polyether Chemical group 0.000 claims description 11
- 239000004721 Polyphenylene oxide Chemical group 0.000 claims description 10
- KAESVJOAVNADME-UHFFFAOYSA-N Pyrrole Chemical compound C=1C=CNC=1 KAESVJOAVNADME-UHFFFAOYSA-N 0.000 claims description 10
- 150000003212 purines Chemical class 0.000 claims description 10
- 229910052717 sulfur Inorganic materials 0.000 claims description 10
- 125000003827 glycol group Chemical group 0.000 claims description 9
- 125000000623 heterocyclic group Chemical group 0.000 claims description 9
- 150000003573 thiols Chemical group 0.000 claims description 9
- YBJHBAHKTGYVGT-ZKWXMUAHSA-N (+)-Biotin Chemical compound N1C(=O)N[C@@H]2[C@H](CCCCC(=O)O)SC[C@@H]21 YBJHBAHKTGYVGT-ZKWXMUAHSA-N 0.000 claims description 8
- DRTQHJPVMGBUCF-XVFCMESISA-N Uridine Chemical compound O[C@@H]1[C@H](O)[C@@H](CO)O[C@H]1N1C(=O)NC(=O)C=C1 DRTQHJPVMGBUCF-XVFCMESISA-N 0.000 claims description 8
- 125000003342 alkenyl group Chemical group 0.000 claims description 8
- 125000000304 alkynyl group Chemical group 0.000 claims description 8
- IJGRMHOSHXDMSA-UHFFFAOYSA-N nitrogen Substances N#N IJGRMHOSHXDMSA-UHFFFAOYSA-N 0.000 claims description 8
- 125000001997 phenyl group Chemical group [H]C1=C([H])C([H])=C(*)C([H])=C1[H] 0.000 claims description 8
- 150000001408 amides Chemical group 0.000 claims description 7
- WSNMPAVSZJSIMT-UHFFFAOYSA-N COc1c(C)c2COC(=O)c2c(O)c1CC(O)C1(C)CCC(=O)O1 Chemical compound COc1c(C)c2COC(=O)c2c(O)c1CC(O)C1(C)CCC(=O)O1 WSNMPAVSZJSIMT-UHFFFAOYSA-N 0.000 claims description 5
- CZPWVGJYEJSRLH-UHFFFAOYSA-N Pyrimidine Chemical compound C1=CN=CN=C1 CZPWVGJYEJSRLH-UHFFFAOYSA-N 0.000 claims description 5
- 230000001268 conjugating effect Effects 0.000 claims description 5
- QVGXLLKOCUKJST-UHFFFAOYSA-N atomic oxygen Chemical compound [O] QVGXLLKOCUKJST-UHFFFAOYSA-N 0.000 claims description 4
- DRTQHJPVMGBUCF-PSQAKQOGSA-N beta-L-uridine Natural products O[C@H]1[C@@H](O)[C@H](CO)O[C@@H]1N1C(=O)NC(=O)C=C1 DRTQHJPVMGBUCF-PSQAKQOGSA-N 0.000 claims description 4
- 229960002685 biotin Drugs 0.000 claims description 4
- 235000020958 biotin Nutrition 0.000 claims description 4
- 239000011616 biotin Substances 0.000 claims description 4
- 125000003917 carbamoyl group Chemical group [H]N([H])C(*)=O 0.000 claims description 4
- 125000000291 glutamic acid group Chemical group N[C@@H](CCC(O)=O)C(=O)* 0.000 claims description 4
- 239000001301 oxygen Substances 0.000 claims description 4
- 229940124530 sulfonamide Drugs 0.000 claims description 4
- DRTQHJPVMGBUCF-UHFFFAOYSA-N uracil arabinoside Natural products OC1C(O)C(CO)OC1N1C(=O)NC(=O)C=C1 DRTQHJPVMGBUCF-UHFFFAOYSA-N 0.000 claims description 4
- 229940045145 uridine Drugs 0.000 claims description 4
- 125000004080 3-carboxypropanoyl group Chemical group O=C([*])C([H])([H])C([H])([H])C(O[H])=O 0.000 claims description 3
- 125000003358 C2-C20 alkenyl group Chemical group 0.000 claims description 3
- 125000001951 carbamoylamino group Chemical group C(N)(=O)N* 0.000 claims description 3
- 125000002915 carbonyl group Chemical group [*:2]C([*:1])=O 0.000 claims description 3
- 150000002170 ethers Chemical class 0.000 claims description 3
- 125000006853 reporter group Chemical group 0.000 claims description 3
- 125000004434 sulfur atom Chemical group 0.000 claims description 3
- 125000002813 thiocarbonyl group Chemical group *C(*)=S 0.000 claims description 3
- 125000001493 tyrosinyl group Chemical group [H]OC1=C([H])C([H])=C(C([H])=C1[H])C([H])([H])C([H])(N([H])[H])C(*)=O 0.000 claims description 2
- OJMIONKXNSYLSR-UHFFFAOYSA-N phosphorous acid Chemical group OP(O)O OJMIONKXNSYLSR-UHFFFAOYSA-N 0.000 claims 7
- 125000004429 atom Chemical group 0.000 claims 2
- 125000002883 imidazolyl group Chemical group 0.000 claims 2
- 125000000524 functional group Chemical group 0.000 abstract description 44
- 229910052739 hydrogen Inorganic materials 0.000 abstract description 32
- PTMHPRAIXMAOOB-UHFFFAOYSA-L phosphoramidate Chemical compound NP([O-])([O-])=O PTMHPRAIXMAOOB-UHFFFAOYSA-L 0.000 abstract description 21
- 150000004713 phosphodiesters Chemical class 0.000 abstract description 19
- RYYWUUFWQRZTIU-UHFFFAOYSA-K thiophosphate Chemical compound [O-]P([O-])([O-])=S RYYWUUFWQRZTIU-UHFFFAOYSA-K 0.000 abstract description 16
- 229910019142 PO4 Inorganic materials 0.000 abstract description 15
- 239000010452 phosphate Substances 0.000 abstract description 15
- NBIIXXVUZAFLBC-UHFFFAOYSA-K phosphate Chemical compound [O-]P([O-])([O-])=O NBIIXXVUZAFLBC-UHFFFAOYSA-K 0.000 abstract description 9
- 239000001257 hydrogen Substances 0.000 abstract description 4
- 125000001165 hydrophobic group Chemical group 0.000 abstract 1
- 125000003010 ionic group Chemical group 0.000 abstract 1
- XEKOWRVHYACXOJ-UHFFFAOYSA-N Ethyl acetate Chemical compound CCOC(C)=O XEKOWRVHYACXOJ-UHFFFAOYSA-N 0.000 description 215
- 239000000243 solution Substances 0.000 description 135
- JUJWROOIHBZHMG-UHFFFAOYSA-N Pyridine Chemical compound C1=CC=NC=C1 JUJWROOIHBZHMG-UHFFFAOYSA-N 0.000 description 126
- OKKJLVBELUTLKV-UHFFFAOYSA-N Methanol Chemical compound OC OKKJLVBELUTLKV-UHFFFAOYSA-N 0.000 description 114
- ZMANZCXQSJIPKH-UHFFFAOYSA-N Triethylamine Chemical compound CCN(CC)CC ZMANZCXQSJIPKH-UHFFFAOYSA-N 0.000 description 109
- 239000000203 mixture Substances 0.000 description 91
- WYURNTSHIVDZCO-UHFFFAOYSA-N Tetrahydrofuran Chemical compound C1CCOC1 WYURNTSHIVDZCO-UHFFFAOYSA-N 0.000 description 78
- VLKZOEOYAKHREP-UHFFFAOYSA-N n-Hexane Chemical compound CCCCCC VLKZOEOYAKHREP-UHFFFAOYSA-N 0.000 description 75
- ZMXDDKWLCZADIW-UHFFFAOYSA-N N,N-Dimethylformamide Chemical compound CN(C)C=O ZMXDDKWLCZADIW-UHFFFAOYSA-N 0.000 description 72
- ATUOYWHBWRKTHZ-UHFFFAOYSA-N dimethylmethane Natural products CCC ATUOYWHBWRKTHZ-UHFFFAOYSA-N 0.000 description 70
- IAZDPXIOMUYVGZ-WFGJKAKNSA-N Dimethyl sulfoxide Chemical compound [2H]C([2H])([2H])S(=O)C([2H])([2H])[2H] IAZDPXIOMUYVGZ-WFGJKAKNSA-N 0.000 description 66
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 65
- UMJSCPRVCHMLSP-UHFFFAOYSA-N pyridine Natural products COC1=CC=CN=C1 UMJSCPRVCHMLSP-UHFFFAOYSA-N 0.000 description 63
- KFZMGEQAYNKOFK-UHFFFAOYSA-N 2-propanol Substances CC(C)O KFZMGEQAYNKOFK-UHFFFAOYSA-N 0.000 description 56
- WEVYAHXRMPXWCK-UHFFFAOYSA-N Acetonitrile Chemical compound CC#N WEVYAHXRMPXWCK-UHFFFAOYSA-N 0.000 description 53
- 229960004592 isopropanol Drugs 0.000 description 52
- 238000003786 synthesis reaction Methods 0.000 description 50
- YMWUJEATGCHHMB-UHFFFAOYSA-N methylene chloride Substances ClCCl YMWUJEATGCHHMB-UHFFFAOYSA-N 0.000 description 49
- 230000015572 biosynthetic process Effects 0.000 description 46
- BWHMMNNQKKPAPP-UHFFFAOYSA-L potassium carbonate Chemical compound [K+].[K+].[O-]C([O-])=O BWHMMNNQKKPAPP-UHFFFAOYSA-L 0.000 description 44
- 239000000047 product Substances 0.000 description 43
- 238000005859 coupling reaction Methods 0.000 description 42
- 230000008878 coupling Effects 0.000 description 41
- 238000010168 coupling process Methods 0.000 description 41
- YLQBMQCUIZJEEH-UHFFFAOYSA-N tetrahydrofuran Natural products C=1C=COC=1 YLQBMQCUIZJEEH-UHFFFAOYSA-N 0.000 description 39
- 125000002924 primary amino group Chemical group [H]N([H])* 0.000 description 37
- 239000001294 propane Substances 0.000 description 36
- 239000000725 suspension Substances 0.000 description 36
- 239000005289 controlled pore glass Substances 0.000 description 35
- 229940086542 triethylamine Drugs 0.000 description 35
- 230000000694 effects Effects 0.000 description 34
- QTBSBXVTEAMEQO-UHFFFAOYSA-N Acetic acid Chemical compound CC(O)=O QTBSBXVTEAMEQO-UHFFFAOYSA-N 0.000 description 33
- 102000004190 Enzymes Human genes 0.000 description 33
- 108090000790 Enzymes Proteins 0.000 description 33
- 239000002904 solvent Substances 0.000 description 33
- 238000006243 chemical reaction Methods 0.000 description 30
- 238000003756 stirring Methods 0.000 description 30
- VYPSYNLAJGMNEJ-UHFFFAOYSA-N Silicium dioxide Chemical compound O=[Si]=O VYPSYNLAJGMNEJ-UHFFFAOYSA-N 0.000 description 29
- 238000003556 assay Methods 0.000 description 29
- 238000005160 1H NMR spectroscopy Methods 0.000 description 28
- RTZKZFJDLAIYFH-UHFFFAOYSA-N Diethyl ether Chemical compound CCOCC RTZKZFJDLAIYFH-UHFFFAOYSA-N 0.000 description 25
- 238000005731 phosphitylation reaction Methods 0.000 description 25
- HEMHJVSKTPXQMS-UHFFFAOYSA-M Sodium hydroxide Chemical compound [OH-].[Na+] HEMHJVSKTPXQMS-UHFFFAOYSA-M 0.000 description 24
- 238000007254 oxidation reaction Methods 0.000 description 23
- XKRFYHLGVUSROY-UHFFFAOYSA-N Argon Chemical compound [Ar] XKRFYHLGVUSROY-UHFFFAOYSA-N 0.000 description 22
- JGFZNNIVVJXRND-UHFFFAOYSA-N N,N-Diisopropylethylamine (DIPEA) Chemical compound CCN(C(C)C)C(C)C JGFZNNIVVJXRND-UHFFFAOYSA-N 0.000 description 22
- 230000003647 oxidation Effects 0.000 description 22
- 229910000027 potassium carbonate Inorganic materials 0.000 description 22
- QGZKDVFQNNGYKY-UHFFFAOYSA-N Ammonia Chemical compound N QGZKDVFQNNGYKY-UHFFFAOYSA-N 0.000 description 21
- CTKINSOISVBQLD-UHFFFAOYSA-N Glycidol Chemical compound OCC1CO1 CTKINSOISVBQLD-UHFFFAOYSA-N 0.000 description 21
- 239000000741 silica gel Substances 0.000 description 21
- 229910002027 silica gel Inorganic materials 0.000 description 21
- 238000010898 silica gel chromatography Methods 0.000 description 20
- 239000012267 brine Substances 0.000 description 19
- 239000011541 reaction mixture Substances 0.000 description 19
- HPALAKNZSZLMCH-UHFFFAOYSA-M sodium;chloride;hydrate Chemical compound O.[Na+].[Cl-] HPALAKNZSZLMCH-UHFFFAOYSA-M 0.000 description 19
- 150000001412 amines Chemical class 0.000 description 18
- 125000001570 methylene group Chemical group [H]C([H])([*:1])[*:2] 0.000 description 18
- LOSXTWDYAWERDB-UHFFFAOYSA-N 1-[chloro(diphenyl)methyl]-2,3-dimethoxybenzene Chemical compound COC1=CC=CC(C(Cl)(C=2C=CC=CC=2)C=2C=CC=CC=2)=C1OC LOSXTWDYAWERDB-UHFFFAOYSA-N 0.000 description 17
- 238000005481 NMR spectroscopy Methods 0.000 description 17
- 238000004587 chromatography analysis Methods 0.000 description 17
- 239000011347 resin Substances 0.000 description 16
- 229920005989 resin Polymers 0.000 description 16
- 238000012216 screening Methods 0.000 description 16
- LFQSCWFLJHTTHZ-UHFFFAOYSA-N Ethanol Chemical compound CCO LFQSCWFLJHTTHZ-UHFFFAOYSA-N 0.000 description 15
- 239000010410 layer Substances 0.000 description 15
- VHUUQVKOLVNVRT-UHFFFAOYSA-N Ammonium hydroxide Chemical compound [NH4+].[OH-] VHUUQVKOLVNVRT-UHFFFAOYSA-N 0.000 description 14
- 108020004414 DNA Proteins 0.000 description 14
- 235000011114 ammonium hydroxide Nutrition 0.000 description 14
- IJOOHPMOJXWVHK-UHFFFAOYSA-N chlorotrimethylsilane Chemical compound C[Si](C)(C)Cl IJOOHPMOJXWVHK-UHFFFAOYSA-N 0.000 description 14
- IXCSERBJSXMMFS-UHFFFAOYSA-N hydrogen chloride Substances Cl.Cl IXCSERBJSXMMFS-UHFFFAOYSA-N 0.000 description 14
- 239000003921 oil Substances 0.000 description 14
- QWTBDIBOOIAZEF-UHFFFAOYSA-N 3-[chloro-[di(propan-2-yl)amino]phosphanyl]oxypropanenitrile Chemical compound CC(C)N(C(C)C)P(Cl)OCCC#N QWTBDIBOOIAZEF-UHFFFAOYSA-N 0.000 description 13
- VEXZGXHMUGYJMC-UHFFFAOYSA-N Hydrochloric acid Chemical compound Cl VEXZGXHMUGYJMC-UHFFFAOYSA-N 0.000 description 13
- NQRYJNQNLNOLGT-UHFFFAOYSA-N Piperidine Chemical compound C1CCNCC1 NQRYJNQNLNOLGT-UHFFFAOYSA-N 0.000 description 13
- 210000004027 cell Anatomy 0.000 description 13
- 239000003153 chemical reaction reagent Substances 0.000 description 13
- 239000003480 eluent Substances 0.000 description 13
- 150000002148 esters Chemical class 0.000 description 13
- 239000000706 filtrate Substances 0.000 description 13
- 239000003112 inhibitor Substances 0.000 description 13
- 239000000758 substrate Substances 0.000 description 13
- FZWGECJQACGGTI-UHFFFAOYSA-N 2-amino-7-methyl-1,7-dihydro-6H-purin-6-one Chemical class NC1=NC(O)=C2N(C)C=NC2=N1 FZWGECJQACGGTI-UHFFFAOYSA-N 0.000 description 12
- DHMQDGOQFOQNFH-UHFFFAOYSA-N Glycine Chemical compound NCC(O)=O DHMQDGOQFOQNFH-UHFFFAOYSA-N 0.000 description 12
- 150000001732 carboxylic acid derivatives Chemical class 0.000 description 12
- 150000002632 lipids Chemical class 0.000 description 12
- NLXLAEXVIDQMFP-UHFFFAOYSA-N Ammonia chloride Chemical compound [NH4+].[Cl-] NLXLAEXVIDQMFP-UHFFFAOYSA-N 0.000 description 11
- ABLZXFCXXLZCGV-UHFFFAOYSA-N Phosphorous acid Chemical group OP(O)=O ABLZXFCXXLZCGV-UHFFFAOYSA-N 0.000 description 11
- ISAKRJDGNUQOIC-UHFFFAOYSA-N Uracil Chemical compound O=C1C=CNC(=O)N1 ISAKRJDGNUQOIC-UHFFFAOYSA-N 0.000 description 11
- 150000001335 aliphatic alkanes Chemical class 0.000 description 11
- 229910021529 ammonia Inorganic materials 0.000 description 11
- 229910052786 argon Inorganic materials 0.000 description 11
- 239000003054 catalyst Substances 0.000 description 11
- 239000000539 dimer Substances 0.000 description 11
- 238000000921 elemental analysis Methods 0.000 description 11
- 238000004128 high performance liquid chromatography Methods 0.000 description 11
- 125000005647 linker group Chemical group 0.000 description 11
- 239000000463 material Substances 0.000 description 11
- 239000012044 organic layer Substances 0.000 description 11
- 229950000688 phenothiazine Drugs 0.000 description 11
- 238000002360 preparation method Methods 0.000 description 11
- 239000007858 starting material Substances 0.000 description 11
- 229940035893 uracil Drugs 0.000 description 11
- CTKINSOISVBQLD-GSVOUGTGSA-N (R)-Glycidol Chemical compound OC[C@@H]1CO1 CTKINSOISVBQLD-GSVOUGTGSA-N 0.000 description 10
- UIIMBOGNXHQVGW-UHFFFAOYSA-M Sodium bicarbonate Chemical class [Na+].OC([O-])=O UIIMBOGNXHQVGW-UHFFFAOYSA-M 0.000 description 10
- IQFYYKKMVGJFEH-XLPZGREQSA-N Thymidine Chemical compound O=C1NC(=O)C(C)=CN1[C@@H]1O[C@H](CO)[C@@H](O)C1 IQFYYKKMVGJFEH-XLPZGREQSA-N 0.000 description 10
- 125000003277 amino group Chemical group 0.000 description 10
- 239000000908 ammonium hydroxide Substances 0.000 description 10
- 238000003776 cleavage reaction Methods 0.000 description 10
- 238000001704 evaporation Methods 0.000 description 10
- CBOIHMRHGLHBPB-UHFFFAOYSA-N hydroxymethyl Chemical compound O[CH2] CBOIHMRHGLHBPB-UHFFFAOYSA-N 0.000 description 10
- 238000010348 incorporation Methods 0.000 description 10
- 230000005764 inhibitory process Effects 0.000 description 10
- 239000012528 membrane Substances 0.000 description 10
- 230000007017 scission Effects 0.000 description 10
- 239000006188 syrup Substances 0.000 description 10
- 235000020357 syrup Nutrition 0.000 description 10
- 229940104230 thymidine Drugs 0.000 description 10
- VEXZGXHMUGYJMC-UHFFFAOYSA-M Chloride anion Chemical compound [Cl-] VEXZGXHMUGYJMC-UHFFFAOYSA-M 0.000 description 9
- KXDAEFPNCMNJSK-UHFFFAOYSA-N benzene carboxamide Chemical group NC(=O)C1=CC=CC=C1 KXDAEFPNCMNJSK-UHFFFAOYSA-N 0.000 description 9
- 230000008020 evaporation Effects 0.000 description 9
- 108020004999 messenger RNA Proteins 0.000 description 9
- 239000002773 nucleotide Substances 0.000 description 9
- 125000003729 nucleotide group Chemical group 0.000 description 9
- 239000000523 sample Substances 0.000 description 9
- 238000012360 testing method Methods 0.000 description 9
- 239000013638 trimer Substances 0.000 description 9
- 238000004679 31P NMR spectroscopy Methods 0.000 description 8
- OAICVXFJPJFONN-UHFFFAOYSA-N Phosphorus Chemical group [P] OAICVXFJPJFONN-UHFFFAOYSA-N 0.000 description 8
- PASDCCFISLVPSO-UHFFFAOYSA-N benzoyl chloride Chemical compound ClC(=O)C1=CC=CC=C1 PASDCCFISLVPSO-UHFFFAOYSA-N 0.000 description 8
- 239000007789 gas Substances 0.000 description 8
- 238000007142 ring opening reaction Methods 0.000 description 8
- 239000000126 substance Substances 0.000 description 8
- KZNICNPSHKQLFF-UHFFFAOYSA-N succinimide Chemical compound O=C1CCC(=O)N1 KZNICNPSHKQLFF-UHFFFAOYSA-N 0.000 description 8
- KQIGMPWTAHJUMN-UHFFFAOYSA-N 3-aminopropane-1,2-diol Chemical compound NCC(O)CO KQIGMPWTAHJUMN-UHFFFAOYSA-N 0.000 description 7
- ZCYVEMRRCGMTRW-UHFFFAOYSA-N 7553-56-2 Chemical compound [I] ZCYVEMRRCGMTRW-UHFFFAOYSA-N 0.000 description 7
- UHOVQNZJYSORNB-UHFFFAOYSA-N Benzene Chemical compound C1=CC=CC=C1 UHOVQNZJYSORNB-UHFFFAOYSA-N 0.000 description 7
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- 125000004001 thioalkyl group Chemical group 0.000 description 1
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- RZWIIPASKMUIAC-VQTJNVASSA-N thromboxane Chemical compound CCCCCCCC[C@H]1OCCC[C@@H]1CCCCCCC RZWIIPASKMUIAC-VQTJNVASSA-N 0.000 description 1
- 230000036964 tight binding Effects 0.000 description 1
- 210000001519 tissue Anatomy 0.000 description 1
- 229910052723 transition metal Inorganic materials 0.000 description 1
- 150000003624 transition metals Chemical class 0.000 description 1
- 150000003852 triazoles Chemical class 0.000 description 1
- 125000002889 tridecyl group Chemical group [H]C([*])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])[H] 0.000 description 1
- 150000005671 trienes Chemical class 0.000 description 1
- 125000000876 trifluoromethoxy group Chemical group FC(F)(F)O* 0.000 description 1
- 125000002023 trifluoromethyl group Chemical group FC(F)(F)* 0.000 description 1
- 125000002948 undecyl group Chemical group [H]C([*])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])[H] 0.000 description 1
- 241000701447 unidentified baculovirus Species 0.000 description 1
- 150000003672 ureas Chemical class 0.000 description 1
- 210000002700 urine Anatomy 0.000 description 1
- 238000010200 validation analysis Methods 0.000 description 1
- 229910052720 vanadium Inorganic materials 0.000 description 1
- 230000003612 virological effect Effects 0.000 description 1
- 238000005406 washing Methods 0.000 description 1
- 229940075420 xanthine Drugs 0.000 description 1
- 125000005023 xylyl group Chemical group 0.000 description 1
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Abstract
Description
Claims (1)
- 【特許請求の範囲】 1.構造I: [式中: XはH、ホスフェート基、活性化ホスフェート基、活性化ホスファイト基、ま たは固体支持体であり; YはHまたはヒドロキシル保護基であり; ZはL1、L1−G1、L2、L2−G2、NR3R4、窒素含有複素環、プリン、ピ リミジン、ホスフェート基、ポリエーテル基、またはポリエチレングリコール基 であり; L1は1から約20の炭素原子を持つアルキル、2から約20の炭素原子を持 つアルケニル、または2から約20の炭素原子を持つアルキニルであり; L2は6から約14の炭素原子を持つアリールまたは7から約15の炭素原子 を持つアラルキルであり; G1はハロゲン、OR1、SR2、NR3R4、C(=NH)NR3R4、NHC( =NH)NR3R4、CH=O、C(=O)OR5、CH(NR3R4)(C(=O )OR5)、C(=O)NR3R4、金属配位基、またはホスフェート基であり; G2はハロゲン、OH、SH、SCH3、またはNR3R4であり; R1はH、1から約6の炭素原子を持つアルキル、またはヒドロキシル保護基 であり; R2はH、1から約6の炭素原子を持つアルキル、またはチオール保護基であ り; R3およびR4は独立してH、1から約6の炭素原子を持つアルキル、またはア ミン保護基であり; R5はH、1から約6の炭素原子を持つアルキル、または酸保護基であり; QはL1、G3、L1−G3、またはG3−L1−G3であり; G3はNR3、C(=O)、C(=S)、C(O)−O、C(O)−NH、 C (S)−O、C(S)−NHまたはS(O)2、NR3C(=O)、NR3C(= S)、NR3C(O)−O、NR3C(O)−NH、NR3C(S)−O、NR3C (S)−NHまたはNR3S(O)2であり; nは0または1であり;および jは1から6であり; ただし、nが0でありかつZがNH2、アデニン、グアニン、シトシン、ウラ シルまたはチミンであり、XまたはYの一つが5Hである場合、XまたはYの他 方はHではなく;および nが0でありかつQがアルキル−NHである場合、Zはビオチンまたはホスホ チロシニルではない] を有する化合物。 2.Yがヒドロキシル保護基である、請求項1記載の化合物。 3.Yがトリチル、メトキシトリチル、ジメトキシトリチルまたはトリメトキシ トリチルである、請求項2記載の化合物。 4.XがH、活性化ホスファイト基または固体支持体である、請求項1記載の化 合物。 5.Xがホスホルアミダイトである、請求項4記載の化合物。 6.nが1であり、Qがカルボニル、チオカルボニル、カルボキシ、アセチル、 アミド、スクシニル、カルバモイル、チオカルバモイル、ウレイド、チオウレイ ド、またはスルホンアミドアシル基である、請求項1記載の化合物。 7.Zが窒素含有複素環である、請求項1記載の化合物。 8.前記窒素含有複素環がイミダゾール、ピロールまたはカルバゾールである、 請求項7記載の化合物。 9.Zがイミダゾールまたはカルバゾールである、請求項8記載の化合物。 10.Zがプリンまたはピリミジンである、請求項1記載の化合物。 11.Xが活性化ホスファイト基であり、Yがヒドロキシル保護基であり、およ びZがアデニン、グアニン、シトシン、ウリジンまたはチミンである、請求項1 0記載の化合物。 12.Zがポリエチレングリコールである、請求項1記載の化合物。 13.Zが1から約20の炭素原子を持つアルキルである、請求項1記載の化合 物。 14.ZがC1−C6アルキル−NH2である、請求項1記載の化合物。 15.Zが6から約14の炭素原子を持つアリール、または7から約15の炭素 原子を持つアラルキルである、請求項1記載の化合物。 16.Zがフルオレニルメチル、フェニルまたはベンジルである、請求項15記 載の化合物。 17.Zがグルタミルである、請求項1記載の化合物。 18.構造II: 式中: XはH、ホスフェート基、活性化ホスフェート基、活性化ホスファイト基、固 体支持体、コンジュゲート基またはオリゴヌクレオチドであり; YはH、ヒドロキシル保護基、コンジュゲート基またはオリゴヌクレオチドで あり; EはOまたはSであり; EEはO-またはN(Y0)T0であり; Y0はHまたは[Q2]jj−Z2であり; T0は[Q1]kk−Z1であるかまたはY0およびT0は一緒に窒素複素環内に連 結されており; Q1およびQ2は独立して、C2−C10アルキル、C2−C10アルケニル、C2− C10アルキニル、C4−C7炭素環式アルキルまたはアルケニル、複素環、2から 10の炭素原子および1から4の酸素または硫黄原子を持つエーテル、ポリアル キルグリコールまたはC7−C14アラルキルであり; jjおよびkkは独立して0または1であり; Z1およびZ2は独立して、H、C1−C2アルキル、C2−C20アルケニル、C2 −C20アルキニル、C6−C14アリール、C7−C15アラルキル、ハロゲン、CH =O、OR1、SR2、NR3R4、C(=NH)NR3R4、CH(NR3R4)、N HC(=NH)NR3R4、CH(NH2)C(=O)OH、C(=O)NR3R4 、C(=O)OR5、金属配位基、レポーター基、窒素含有複素環、プリン、ピ リミジン、ホスフェート基、ポリエーテル基、またはポリエチレングリコール基 であり; ZはL1、L1−G1、L2、L2−G2、NR3R4、窒素含有複素環、プリン、ピ リミジン、ホスフェート基、ポリエーテル基、またはポリエチレングリコール基 であり; L1は1から約20の炭素原子を持つアルキル、2から約20の炭素原子を持 つアルケニル、または2から約20の炭素原子を持つアルキニルであり; L2は6から約14の炭素原子を持つアリールまたは7から約15の炭素原子 を持つアラルキルであり; G1はハロゲン、OR1、SR2、NR3R4、C(=NH)NR3R4、NHC( =NH)NR3R4、CH=O、C(=O)OR5、CH(NR3R4)(C(=O )OR5)、C(=O)NR3R4、金属配位基、またはホスフェート基であり; G2はハロゲン、OH、SH、SCH3、またはNR3R4であり; R1はH、1から約6の炭素原子を持つアルキル、またはヒドロキシル保護基 であり; R2はH、1から約6の炭素原子を持つアルキル、またはチオール保護基であ り; R3およびR4は独立してH、1から約6の炭素原子を持つアルキル、またはア ミン保護基であり; R5はH、1から約6の炭素原子を持つアルキル、または酸保護基であり; QはL1、G3、L1−G3、またはG3−L1−G3であり; G3はNR3、C(=O)、C(=S)、C(O)−O、C(O)−NH、C( S)−O、C(S)−NHまたはS(O)2、NR3C(=O)、NR3C(=S )、NR3C(O)−O、NR3C(O)−NH、NR3C(S)−O、NR3C( S)−NHまたはNR3S(O)2であり; nは0または1であり; jは1から6であり;および mは1から50である] を有する化合物。 19.Yがヒドロキシル保護基である、請求項18記載の化合物。 20.Yがトリチル、メトキシトリチル、ジメトキシトリチルまたはトリメトキ シトリチルである、請求項19記載の化合物。 21.XがH、活性化ホスファイト基または固体支持体である、請求項18記載 の化合物。 22.Xがホスホルアミダイトである、請求項21記載の化合物。 23.nが1であり、Qがカルボニル、チオカルボニル、カルボキシ、アセチル 、アミド、スクシニル、カルバモイル、チオカルバモイル、ウレイド、チオウレ イド、またはスルホンアミドアシル基である、請求項18記載の化合物。 24.Zが窒素含有複素環である、請求項18記載の化合物。 25.前記窒素含有複素環がイミダゾール、ピロールまたはカルバゾールである 、請求項24記載の化合物。 26.Zがイミダゾールまたはカルバゾールである、請求項25記載の化合物。 27.Zがプリンまたはピリミジンである、請求項18記載の化合物。 28.Zがアデニン、グアニン、シトシン、ウリジンまたはチミンである、請求 項27記載の化合物。 29.nが0である、請求項28記載の化合物。 30.Zが1から約20の炭素原子を持つアルキルである、請求項18記載の化 合物。 31.ZがC1−C6アルキル−NH2である、請求項18記載の化合物。 32.Zが6から約14の炭素原子を持つアリール、または7から約15の炭素 原子を持つアラルキルである、請求項18記載の化合物。 33.Zがカルバゾール、フェニルまたはベンジルである、請求項32記載の化 合物。 34.Zがグルタミルである、請求項18記載の化合物。 35.mが1から約25である、請求項18記載の化合物。 36.EがOである、請求項18記載の化合物。 37.EがSである、請求項18記載の化合物。 38.前記モノマーのそれぞれのZ基が、あらかじめ定められた配列にある、請 求項18記載の化合物。 39.前記モノマーのそれぞれのZ基が、ランダム化配列にある、請求項18記 載の化合物。 40.ランダム化オリゴマー化合物を製造する方法であって、構造I: [式中: XはH、ホスフェート基、活性化ホスフェート基、活性化ホスファイト基、ま たは固体支持体であり; YはHまたはヒドロキシル保護基であり; ZはL1、L1−G1、L2、L2−G2、NR3R4、窒素含有複素環、プリン、ピ リミジン、ホスフェート基、ポリエーテル基、またはポリエチレングリコール基 であり; L1は1から約20の炭素原子を持つアルキル、2から約20の炭素原子を持 つアルケニル、または2から約20の炭素原子を持つアルキニルであり; L2は6から約14の炭素原子を持つアリールまたは7から約15の炭素原子 を持つアラルキルであり; G1はハロゲン、OR1、SR2、NR3R4、C(=NH)NR3R4、NHC( =NH)NR3R4、CH=O、C(=O)OR5、CH(NR3R4)(C(=O )OR5)、C(=O)NR3R4、金属配位基、またはホスフェート基であり; G2はハロゲン、OH、SH、SCH3、またはNR3R4であり; R1はH、1から約6の炭素原子を持つアルキル、またはヒドロキシル保護基 であり; R2はH、1から約6の炭素原子を持つアルキル、またはチオール保護基であ り; R3およびR4は独立してH、1から約6の炭素原子を持つアルキル、またはア ミン保護基であり; R5はH、1から約6の炭素原子を持つアルキル、または酸保護基であり; QはL1、G3、L1−G3、またはG3−L1−G3であり; G3はNR3、C(=O)、C(=S)、C(O)−O、C(O)−NH、C( S)−O、C(S)−NHまたはS(O)2、NR3C(=O)、NR3C(=S )、NR3C(O)−O、NR3C(O)−NH、NR3C(S)−O、NR3C( S)−NHまたはNR3S(O)2であり; nは0または1であり;および jは1から6である] を有するモノマーの群を選択し;そして 前記群の少なくとも2つのモノマーを共有結合させて、前記化合物を形成する; ことを含む方法。 41.前記群の少なくとも1つのモノマーのZ成分が、前記群の他のモノマーの Z成分と異なる、請求項40記載の方法。 42.前記ランダム化オリゴマー化合物が、2から50個の前記モノマーを含む 、請求項40記載の方法。 43.請求項40記載の方法により製造されたオリゴマー化合物であって、2か ら25個の前記モノマーを含む化合物。 44.構造II: 式中: Xは、ホスフェート基、活性化ホスフェート基、活性化ホスファイト基、固体 支持体、コンジュゲート基またはオリゴヌクレオチドであり; YはH、ヒドロキシル保護基、コンジュゲート基またはオリゴヌクレオチドで あり; EはOまたはSであり; EEはO-またはN(Y0)T0であり; Y0はHまたは[Q2]jj−Z2であり; T0は[Q1]kk−Z1であるかまたはY0およびT0は一緒に窒素複素環内に連 結されており; Q1およびQ2は独立して、C2−C10アルキル、C2−C10アルケニル、C2− C10アルキニル、C4−C7炭素環式アルキルまたはアルケニル、複素環、2から 10の炭素原子および1から4の酸素または硫黄原子を持つエーテル、ポリアル キルグリコールまたはC7−C14アラルキルであり; jjおよびkkは独立して0または1であり; Z1およびZ2は独立して、H、C1−C2アルキル、C2−C20アルケニル、C2 −C20アルキニル、C6−C14アリール、C7−C15アラルキル、ハロゲン、CH =O、OR1、SR2、NR3R4、C(=NH)NR3R4、CH(NR3R4)、N HC(=NH)NR3R4、CH(NH2)C(=O)OH、C(=O)NR3R4 、C(=O)OR5、金属配位基、レポーター基、窒素含有複素環、プリン、ピ リミジン、ホスフェート基、ポリエーテル基、またはポリエチレングリコール基 であり; ZはL1、L1−G1、L2、L2−G2、NR3R4、窒素含有複素環、プリン、ピ リミジン、ホスフェート基、ポリエーテル基、またはポリエチレングリコール基 であり; L1は1から約20の炭素原子を持つアルキル、2から約20の炭素原子を持 つアルケニル、または2から約20の炭素原子を持つアルキニルであり; L2は6から約14の炭素原子を持つアリールまたは7から約15の炭素原子 を持つアラルキルであり; G1はハロゲン、OR1、SR2、NR3R4、C(=NH)NR3R4、NHC( =NH)NR3R4、CH=O、C(=O)OR5、CH(NR3R4)(C(=O )OR5)、C(=O)NR3R4、金属配位基、またはホスフェート基であり; G2はハロゲン、OH、SH、SCH3、またはNR3R4であり; R1はH、1から約6の炭素原子を持つアルキル、またはヒドロキシル保護基 であり; R2はH、1から約6の炭素原子を持つアルキル、またはチオール保護基であ り; R3およびR4は独立してH、1から約6の炭素原子を持つアルキル、またはア ミン保護基であり; R5はH、1から約6の炭素原子を持つアルキル、または酸保護基であり; QはL1、G3、L1−G3、またはG3−L1−G3であり; G3はNR3、C(=O)、C(=S)、C(O)−O、C(O)−NH、C( S)−O、C(S)−NHまたはS(O)2、NR3C(=O)、NR3C(=S )、NR3C(O)−O、NR3C(O)−NH、NR3C(S)−O、NR3C( S)−NHまたはNR3S(O)2であり; nは0または1であり; jは1から6であり;および mは1から50である] を有するフランク領域の間におかれた、ホスホジエステルまたはホスホロチオエ ートオリゴヌクレオチドを含む中心領域を有する、キメラオリゴマー化合物。
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| US08/179,970 | 1994-01-11 | ||
| US08/179,970 US6448373B1 (en) | 1994-01-11 | 1994-01-11 | Phosphate linked oligomers formed of monomeric diols and processes for preparing same |
| US179,970 | 1994-01-11 | ||
| PCT/US1995/000449 WO1995018820A1 (en) | 1994-01-11 | 1995-01-11 | Monomeric diols and phosphate linked oligomers formed therefrom |
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| JP3072127B2 JP3072127B2 (ja) | 2000-07-31 |
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| US (2) | US6448373B1 (ja) |
| EP (1) | EP0739351B1 (ja) |
| JP (1) | JP3072127B2 (ja) |
| AT (1) | ATE215960T1 (ja) |
| CA (1) | CA2180867C (ja) |
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| US5886177A (en) * | 1994-01-11 | 1999-03-23 | Isis Pharmaceuticals, Inc. | Phosphate linked oligomers |
-
1994
- 1994-01-11 US US08/179,970 patent/US6448373B1/en not_active Expired - Fee Related
-
1995
- 1995-01-11 EP EP95908491A patent/EP0739351B1/en not_active Expired - Lifetime
- 1995-01-11 JP JP7518700A patent/JP3072127B2/ja not_active Expired - Fee Related
- 1995-01-11 AT AT95908491T patent/ATE215960T1/de not_active IP Right Cessation
- 1995-01-11 DE DE69526331T patent/DE69526331T2/de not_active Expired - Fee Related
- 1995-01-11 CA CA002180867A patent/CA2180867C/en not_active Expired - Fee Related
- 1995-01-11 WO PCT/US1995/000449 patent/WO1995018820A1/en not_active Ceased
-
2002
- 2002-06-03 US US10/162,365 patent/US20030065146A1/en not_active Abandoned
Cited By (2)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| JP2020507636A (ja) * | 2017-01-04 | 2020-03-12 | ソレント・セラピューティクス・インコーポレイテッドSorrento Therapeutics, Inc. | 細胞表面チオールとの反応のためのチオール反応性基を含有する細胞内在化コンジュゲート |
| JP2023174930A (ja) * | 2019-10-28 | 2023-12-08 | ジェロン・コーポレーション | 3-パルミトイル-アミド-1,2-プロパンジオールおよび3-パルミトイル-アミド-2-ヒドロキシ-1-ジメトキシトリフェニルメチルエーテル-プロパンの結晶性固体ならびにそれらを作製および使用する方法 |
Also Published As
| Publication number | Publication date |
|---|---|
| CA2180867C (en) | 2004-12-14 |
| CA2180867A1 (en) | 1995-07-13 |
| EP0739351A1 (en) | 1996-10-30 |
| JP3072127B2 (ja) | 2000-07-31 |
| EP0739351B1 (en) | 2002-04-10 |
| WO1995018820A1 (en) | 1995-07-13 |
| EP0739351A4 (en) | 1998-10-21 |
| US20030065146A1 (en) | 2003-04-03 |
| DE69526331T2 (de) | 2002-08-08 |
| US6448373B1 (en) | 2002-09-10 |
| ATE215960T1 (de) | 2002-04-15 |
| DE69526331D1 (de) | 2002-05-16 |
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